BLASTX nr result

ID: Rehmannia28_contig00028398 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00028398
         (494 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012843972.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-27
ref|XP_011080627.1| PREDICTED: pentatricopeptide repeat-containi...   112   6e-26
gb|KVH91268.1| Pentatricopeptide repeat-containing protein [Cyna...    57   1e-06
ref|XP_008811604.1| PREDICTED: pentatricopeptide repeat-containi...    55   4e-06
ref|XP_010915429.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_010915324.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>ref|XP_012843972.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Erythranthe guttata]
          Length = 549

 Score =  115 bits (287), Expect = 5e-27
 Identities = 54/77 (70%), Positives = 62/77 (80%)
 Frame = +1

Query: 262 AALADFLRPRLTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTLC 441
           AA++   RPR + AK T Q  L HSFSD+E+L PSPAPC AV KPSLP L +SP+AD+LC
Sbjct: 8   AAVSHIFRPRFSSAKITLQLNLLHSFSDSEQLDPSPAPCAAVEKPSLPALQNSPEADSLC 67

Query: 442 QVLIRHHNPFHHMESSL 492
           QVLIRHHNPFHHMESSL
Sbjct: 68  QVLIRHHNPFHHMESSL 84


>ref|XP_011080627.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Sesamum indicum]
          Length = 540

 Score =  112 bits (279), Expect = 6e-26
 Identities = 54/78 (69%), Positives = 59/78 (75%)
 Frame = +1

Query: 259 MAALADFLRPRLTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTL 438
           MAAL   LRPR  FAK T Q  L+HSFSD+E   PS  PC +V KPSLPP  HSP+AD+L
Sbjct: 1   MAALTHSLRPRFAFAKMTLQLKLFHSFSDSEHDEPSGPPCGSVEKPSLPPFQHSPEADSL 60

Query: 439 CQVLIRHHNPFHHMESSL 492
            QVLIRHHNPFHHMESSL
Sbjct: 61  SQVLIRHHNPFHHMESSL 78


>gb|KVH91268.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 519

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = +1

Query: 292 LTFAKPTFQFILYHSFSDTEELSPSPAPCLAVGKPSLPPLHHSPDADTLCQVLIRHHNPF 471
           + F    F+F+   S S  +   P      A+ KPSLP L  S DAD + Q+LI+HHNPF
Sbjct: 1   MMFTLSHFRFVSSFSCSTFD---PKEVVAEAMTKPSLPSLESSRDADLISQILIQHHNPF 57

Query: 472 HHMESSL 492
           H MESSL
Sbjct: 58  HSMESSL 64


>ref|XP_008811604.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Phoenix dactylifera]
          Length = 527

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
 Frame = +1

Query: 355 LSPSPAPCLAVG------KPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSL 492
           LS SP P L +G      KPS PPL  S DAD L ++LI HHNPFH +ES L
Sbjct: 23  LSHSPEPELGLGLSGSSPKPSAPPLRPSADADALARLLIHHHNPFHPLESPL 74


>ref|XP_010915429.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like isoform X2 [Elaeis guineensis]
          Length = 503

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
 Frame = +1

Query: 355 LSPSPAPCLAVG------KPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSL 492
           LS SP P L +G      KPS PPL  S DAD L ++LI HHNPFH +ES L
Sbjct: 23  LSHSPLPELGLGFSGSSPKPSPPPLRPSDDADALARLLIHHHNPFHPLESPL 74


>ref|XP_010915324.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like isoform X1 [Elaeis guineensis]
          Length = 527

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 6/52 (11%)
 Frame = +1

Query: 355 LSPSPAPCLAVG------KPSLPPLHHSPDADTLCQVLIRHHNPFHHMESSL 492
           LS SP P L +G      KPS PPL  S DAD L ++LI HHNPFH +ES L
Sbjct: 23  LSHSPLPELGLGFSGSSPKPSPPPLRPSDDADALARLLIHHHNPFHPLESPL 74


Top