BLASTX nr result
ID: Rehmannia28_contig00028311
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00028311
(3560 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 897 0.0
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 893 0.0
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 892 0.0
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 892 0.0
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 887 0.0
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 877 0.0
ref|XP_010451516.1| PREDICTED: uncharacterized protein LOC104733... 837 0.0
gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposo... 741 0.0
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo... 694 0.0
gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposo... 684 0.0
gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposo... 672 0.0
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 690 0.0
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera] 657 0.0
gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposo... 659 0.0
gb|AEL30380.1| hypothetical protein 205D04_20 [Arachis hypogaea] 670 0.0
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni... 661 0.0
gb|ABF94836.1| retrotransposon protein, putative, unclassified [... 658 0.0
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 659 0.0
gb|ABF93543.1| retrotransposon protein, putative, unclassified [... 658 0.0
gb|ABF67946.1| putative Opie4 pol protein [Zea mays] 630 0.0
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 897 bits (2319), Expect = 0.0
Identities = 505/1144 (44%), Positives = 675/1144 (59%), Gaps = 21/1144 (1%)
Frame = -3
Query: 3369 KSDTKTLDS--IRCRACTGYGHYAAQCANTLMKKGMSLTVTLSDNESDGEKNDQEENKVL 3196
+SD K S I+C C GYGH A+C L K L+V SD ES+ E + + L
Sbjct: 289 RSDVKPSHSKGIQCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNAL 348
Query: 3195 TTLVKNRKSLQINPSGVARGVARDVITPSLITSEVTSDEHDLSSISNHFCFNSTSVPXXX 3016
T G+ S SE+T DE L++ C S +
Sbjct: 349 T------------------GIFETAEDSSDTDSEITFDE--LAASYRKLCIKSEKI---- 384
Query: 3015 XXXXXXXXXXXXDTYANLYKDWLKRIKVNEMLKKENDRLTKENDDQREVVTRLEASLTXX 2836
++ LKK L E + E ++ L+ +
Sbjct: 385 -------------------------LQQEAQLKKVIADLEAEKEAHEEEISELKGEV--- 416
Query: 2835 XXXXXXXXXXXXXXXXXXKRFNSGKAKLDDILSMGSD--DKTGLGYKTPV--------FV 2686
K N G LD++L +G + ++ GLG+ FV
Sbjct: 417 ----GFLNSKLETMKKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKFAGRTTMTEFV 472
Query: 2685 KAKEQ-GESSDSSNNKMIFSQKSKPRKRHFICHYCHAPGHIKPFCYKLKSDLRSGRQMSS 2509
AK + G + ++ +Q+ K +++ + CHYC GHIKPFCY L G Q S+
Sbjct: 473 PAKNRTGTTMSQHLSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSN 532
Query: 2508 ---QMLRHPRNHFXXXXXXXXXXXKCHVIYTSLRSNVAGSWYFDSGCSRHMTGTLEYLTD 2338
+M+ P++ V++TSLR++ WY DSGCSRHMTG E+L +
Sbjct: 533 SRKKMMWVPKHKAVSL-----------VVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLN 581
Query: 2337 YEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHVVGLNANLISISQLCDDDLYVK 2158
E + VT+G +KGKI+G G L +GLP L +L V GL ANLISISQLCD+ V
Sbjct: 582 IEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVN 641
Query: 2157 FNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL-----CHRAHTNDTDLWHQKLGHVSH 1993
F K+ C V +E ++ G RS DNCY + + C + ++ +WHQ+ GH+
Sbjct: 642 FTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHL 701
Query: 1992 KKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTRCLELVHMDLMG 1813
+ + +++ AV G+P L ++ +C CQ GKQ ++SHQ H T+R LEL+HMDLMG
Sbjct: 702 RGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMG 761
Query: 1812 PIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNLYNLTVARIRSD 1633
P+++ES+GG++Y+YV+VDDFSR+TW F+REKSETF+ F+ ++ + + RIRSD
Sbjct: 762 PMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKRIRSD 821
Query: 1632 HGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVMLSSKKLSKRFW 1453
HG+EFENS F FC +GI+HEFSA TPQQNG+ ERKNRTLQE RVML +K+L W
Sbjct: 822 HGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLW 881
Query: 1452 AEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLNDRDNLGKFDSK 1273
AEA+NTAC+I NRV LR G T YEI G+KP++K+FH+FG CY+L DR+ K D K
Sbjct: 882 AEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPK 941
Query: 1272 SDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDHVDLLEFVETAPA 1093
SD +FLGY++NS AYRV+N RT+T+MES+N+V DDLS K E+ V L
Sbjct: 942 SDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTLG------- 994
Query: 1092 KDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEETNNPIVDRG 913
+NV +A + + NAE + +A++ E+N D+
Sbjct: 995 --------DNVADAAKSGE-NAENSDSATD--------------------ESNINQPDKR 1025
Query: 912 SDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVRTCCFVSNFE 733
S TRIQ+ HP IIG+ G+ TR S + V CFVS E
Sbjct: 1026 SS--TRIQKMHPKELIIGDPNRGVTTR----------------SREVEIVSNSCFVSKIE 1067
Query: 732 PKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVR 553
PKNV EAL DEFWI++MQEEL+QF +N+VW LVPRPE NVIGTKWIFKNKT+E G I R
Sbjct: 1068 PKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITR 1127
Query: 552 NKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLD 373
NKARLVAQGYTQ+EGVDFDETFAPVAR+ESIRLLL +AC L L+QMDVKSAFLN +L+
Sbjct: 1128 NKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLN 1187
Query: 372 EEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLF 193
EE +VEQPKGF DP P+HVY+LKKALYGLKQAPRAWY RLTE+L Q G+++G +DKTLF
Sbjct: 1188 EEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLF 1247
Query: 192 IQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKE 13
+++ ++MIAQIYVDDIVFG S+++L+ F+ M S FEMS+VGEL+YFLGLQ+KQ+++
Sbjct: 1248 VKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMED 1307
Query: 12 GIFI 1
IF+
Sbjct: 1308 SIFL 1311
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 893 bits (2307), Expect = 0.0
Identities = 503/1153 (43%), Positives = 672/1153 (58%), Gaps = 22/1153 (1%)
Frame = -3
Query: 3393 RFSGDKSNKSDTKTLDS--IRCRACTGYGHYAAQCANTLMKKGMSLTVTLSDN-ESDGEK 3223
R + KSD K S I+CR C GYGH A+C L K+ L+V SD+ ES+ E
Sbjct: 281 RKGSEYQRKSDEKPSHSKGIQCRGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQES 340
Query: 3222 NDQEENKVLTTLVKNRKSLQINPSGVARGVARDVITPSLITSEVTSDEHDLSSISNHFCF 3043
+ + LT ++ + S SE+T DE L+ C
Sbjct: 341 DSDRDVNALTGRFESAED------------------SSDTDSEITFDE--LAIFYRELCI 380
Query: 3042 NSTSVPXXXXXXXXXXXXXXXDTYANLYKDWLKRIKVNEMLKKENDRLTKENDDQREVVT 2863
S + ++ LKK L E + E ++
Sbjct: 381 KSEKI-----------------------------LQQEAQLKKVIANLEAEKEAHEEEIS 411
Query: 2862 RLEASLTXXXXXXXXXXXXXXXXXXXXKRFNSGKAKLDDILSMGSD--DKTGLGYK---- 2701
+L+ + K N G LD++L +G ++ GLG+
Sbjct: 412 KLKGEV-------GFLNSKLENMTKSIKMLNKGSDMLDZVLQLGKKVGNQRGLGFNHKSA 464
Query: 2700 ----TPVFVKAKEQ-GESSDSSNNKMIFSQKSKPRKRHFICHYCHAPGHIKPFCYKLKSD 2536
FV AK G + ++ +Q+ + +++ + CHYC GHIKPFCY L
Sbjct: 465 GRTTMTEFVPAKNSTGATMSQHRSRHHGTQQKRSKRKKWRCHYCGKYGHIKPFCYHLHGH 524
Query: 2535 LRSGRQMSS---QMLRHPRNHFXXXXXXXXXXXKCHVIYTSLRSNVAGSWYFDSGCSRHM 2365
G Q SS +M+ P++ V++TSLR++ WY DSGCSRHM
Sbjct: 525 PHHGTQGSSSGRKMMWVPKHKIVSL-----------VVHTSLRASAKEDWYLDSGCSRHM 573
Query: 2364 TGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHVVGLNANLISISQ 2185
TG E+L + E + VT+G +KGKI G G L EGLP L +L V GL NLISISQ
Sbjct: 574 TGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHEGLPSLNKVLLVKGLTVNLISISQ 633
Query: 2184 LCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQLCHRA-----HTNDTDLW 2020
LCD+ V F K+ C V +E ++ G RS DNCY + + H + ++ +W
Sbjct: 634 LCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQESSHSSTCLFSKEDEVKIW 693
Query: 2019 HQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTRCL 1840
HQ+ GH+ + + +++ AV G+P L ++ +C CQ GKQ ++SHQ H T+R L
Sbjct: 694 HQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVL 753
Query: 1839 ELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNLYN 1660
EL+HMDLMGP+++ES+GG++Y+YV+VDDFSR+TW F+REKS+TF+ F+ ++ +
Sbjct: 754 ELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKD 813
Query: 1659 LTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVMLS 1480
+ RIRSDHG+EFENS F FC +GI+HEFSA TPQQNG+ ERKNRTLQE RVML
Sbjct: 814 CVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLH 873
Query: 1479 SKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLNDR 1300
+K+L WAEA+NTAC+I NRV LR G T YEI G+KP +K+FH+FG CY+L DR
Sbjct: 874 AKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADR 933
Query: 1299 DNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDHVDL 1120
+ K D KSD +FLGY++NS AYRV+N RT+T+MES+N+V DDL+ K E+ V
Sbjct: 934 EQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDV-- 991
Query: 1119 LEFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEE 940
+ D D ++ A ++ + EPN+
Sbjct: 992 ------RTSGDNVADTAKSAENAENSDSATDEPNI------------------------- 1020
Query: 939 TNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVR 760
N P D+ I RIQ+ HP IIG+ G+ TR S + V
Sbjct: 1021 -NQP--DKRPSI--RIQKMHPKELIIGDPNRGVTTR----------------SREIEIVS 1059
Query: 759 TCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNK 580
CFVS EPKNV EAL DEFWI++MQEEL+QF +N+VW LVPRPE NVIGTKWIFKNK
Sbjct: 1060 NSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNK 1119
Query: 579 TDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVK 400
T+E G I RNKARLVAQGYTQ+EGVDFDETFAPVAR+ESIRLLL +AC L L+QMDVK
Sbjct: 1120 TNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVK 1179
Query: 399 SAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFK 220
SAFLN +L+EEA+VEQPKGF DP P+HVY+LKKALYGLKQAPRAWY RLTE+L Q G++
Sbjct: 1180 SAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYR 1239
Query: 219 RGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFL 40
+G +DKTLF+++ ++MIAQIYVDDIVFG S+++L+ F+ M S FEMS+VGEL+YFL
Sbjct: 1240 KGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFL 1299
Query: 39 GLQIKQLKEGIFI 1
GLQ+KQ+++ IF+
Sbjct: 1300 GLQVKQMEDSIFL 1312
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 892 bits (2306), Expect = 0.0
Identities = 506/1144 (44%), Positives = 675/1144 (59%), Gaps = 21/1144 (1%)
Frame = -3
Query: 3369 KSDTKTLDS--IRCRACTGYGHYAAQCANTLMKKGMSLTVTLSDNESDGEKNDQEENKVL 3196
KSD K S I+C C GYGH A+C L K L+V SD ES+ E + + L
Sbjct: 289 KSDVKPSHSKGIQCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNAL 348
Query: 3195 TTLVKNRKSLQINPSGVARGVARDVITPSLITSEVTSDEHDLSSISNHFCFNSTSVPXXX 3016
T G+ S SE+T DE L++ C S +
Sbjct: 349 T------------------GIFETAEDSSDTDSEITFDE--LATSYRKLCIKSEKI---- 384
Query: 3015 XXXXXXXXXXXXDTYANLYKDWLKRIKVNEMLKKENDRLTKENDDQREVVTRLEASLTXX 2836
++ LKK L E + +E ++ L+ +
Sbjct: 385 -------------------------LQQEAQLKKVIADLEAEKEAHKEEISELKGEV--- 416
Query: 2835 XXXXXXXXXXXXXXXXXXKRFNSGKAKLDDILSMGSD--DKTGLGYKTPV--------FV 2686
K N G LD++L +G + ++ GLG+ FV
Sbjct: 417 ----GFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTMTEFV 472
Query: 2685 KAKEQ-GESSDSSNNKMIFSQKSKPRKRHFICHYCHAPGHIKPFCYKLKSDLRSGRQMSS 2509
AK + G + ++ Q+ K +++ + CHYC GHIKPFCY L G Q S+
Sbjct: 473 PAKNRTGATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHP--HHGTQSSN 530
Query: 2508 ---QMLRHPRNHFXXXXXXXXXXXKCHVIYTSLRSNVAGSWYFDSGCSRHMTGTLEYLTD 2338
+M+ P++ V++TSLR++ WY DSGCSRHMTG E+L +
Sbjct: 531 SRKKMMWVPKHKAVSL-----------VVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLN 579
Query: 2337 YEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHVVGLNANLISISQLCDDDLYVK 2158
E + VT+G +KGKI+G G L +GLP L +L V GL ANLISISQLCD+ V
Sbjct: 580 IEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVN 639
Query: 2157 FNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL-----CHRAHTNDTDLWHQKLGHVSH 1993
F K+ C V +E ++ G RS DNCY + + C + ++ +WHQ+ GH+
Sbjct: 640 FTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHL 699
Query: 1992 KKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTRCLELVHMDLMG 1813
+ + +++ AV G+P L ++ +C CQ GKQ ++SHQ H T+R LEL+HMDLMG
Sbjct: 700 RGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMG 759
Query: 1812 PIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNLYNLTVARIRSD 1633
P+++ES+GG++Y+YV+VDDFSR+TW F+REKSETF+ F+ ++ + + RIRSD
Sbjct: 760 PMQVESLGGKRYAYVVVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSD 819
Query: 1632 HGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVMLSSKKLSKRFW 1453
HG+EFENS FC +GI+HEFSA TPQQNG+ ERKNRTLQE RVML +K+L W
Sbjct: 820 HGREFENSRLTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLW 879
Query: 1452 AEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLNDRDNLGKFDSK 1273
AEA+NTAC+I NRV LR G T YEI G+KP++K+FH+FG CY+L DR+ K D K
Sbjct: 880 AEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPK 939
Query: 1272 SDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDHVDLLEFVETAPA 1093
SD +FLGY++NS AYRV+N RT+T+MES+N+V DDLS K E+
Sbjct: 940 SDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEE------------- 986
Query: 1092 KDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEETNNPIVDRG 913
DV T +NV +A + + NAE + +A++ E+N D+
Sbjct: 987 -DVRTSG-DNVADAAKSGE-NAENSDSATD--------------------ESNINQPDKR 1023
Query: 912 SDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVRTCCFVSNFE 733
S TRIQ+ HP IIG+ G+ TR S + V CFVS E
Sbjct: 1024 SS--TRIQKMHPKELIIGDPNRGVTTR----------------SREVEIVSNSCFVSKIE 1065
Query: 732 PKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVR 553
PKNV EAL DEFWI++MQEEL+QF +N+VW LVPRPE NVIGTKWIFKNKT+E G I R
Sbjct: 1066 PKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITR 1125
Query: 552 NKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLD 373
NKARLVAQGYTQ+EGVDFDETFAPVAR+ESIRLLL +AC L L+QMDVKSAFLN +L+
Sbjct: 1126 NKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLN 1185
Query: 372 EEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLF 193
EE +VEQPKGF DP P+HVY+LKKALYGLKQAPRAWY RLTE+L Q G+++G +DKTLF
Sbjct: 1186 EEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLF 1245
Query: 192 IQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKE 13
+++ ++MIAQIYVDDIVFG S+++L+ F+ M S FEMS+VGEL+YFLGLQ+KQ+++
Sbjct: 1246 VKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMED 1305
Query: 12 GIFI 1
IF+
Sbjct: 1306 SIFL 1309
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 892 bits (2306), Expect = 0.0
Identities = 504/1144 (44%), Positives = 674/1144 (58%), Gaps = 21/1144 (1%)
Frame = -3
Query: 3369 KSDTKTLDS--IRCRACTGYGHYAAQCANTLMKKGMSLTVTLSDNESDGEKNDQEENKVL 3196
+SD K S I+C C GYGH A+C L K L+V SD ES+ E + + L
Sbjct: 289 RSDVKPSHSKGIQCHGCEGYGHIIAECPTHLKKHRKGLSVCQSDTESEQESDSDRDVNAL 348
Query: 3195 TTLVKNRKSLQINPSGVARGVARDVITPSLITSEVTSDEHDLSSISNHFCFNSTSVPXXX 3016
G+ S SE+T DE L++ C S +
Sbjct: 349 I------------------GIFETAEDSSDTDSEITFDE--LAASYRKLCIKSEKI---- 384
Query: 3015 XXXXXXXXXXXXDTYANLYKDWLKRIKVNEMLKKENDRLTKENDDQREVVTRLEASLTXX 2836
++ LKK L E + +E ++ L+ +
Sbjct: 385 -------------------------LQQEAQLKKVIADLEAEKEAHKEEISELKGEV--- 416
Query: 2835 XXXXXXXXXXXXXXXXXXKRFNSGKAKLDDILSMGSD--DKTGLGYKTPV--------FV 2686
K N G LD++L +G + ++ GLG+ FV
Sbjct: 417 ----GFLNSKLENMTKSIKMLNKGSDTLDEVLLLGKNAGNQRGLGFNPKSAGRTTMTEFV 472
Query: 2685 KAKEQ-GESSDSSNNKMIFSQKSKPRKRHFICHYCHAPGHIKPFCYKLKSDLRSGRQMSS 2509
AK + G + ++ Q+ K +++ + CHYC GHIKPFCY L G Q S+
Sbjct: 473 PAKNRTGATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSN 532
Query: 2508 ---QMLRHPRNHFXXXXXXXXXXXKCHVIYTSLRSNVAGSWYFDSGCSRHMTGTLEYLTD 2338
+M+ P++ V++TSLR++ WY DSGCSRHMTG E+L +
Sbjct: 533 SRKKMMWVPKHKAVSL-----------VVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLN 581
Query: 2337 YEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHVVGLNANLISISQLCDDDLYVK 2158
E + VT+G +KGKI+G G L +GLP L +L V GL ANLISISQLCD+ V
Sbjct: 582 IEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVN 641
Query: 2157 FNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL-----CHRAHTNDTDLWHQKLGHVSH 1993
F K+ C V +E ++ G RS DNCY + + C + ++ +WHQ+ GH+
Sbjct: 642 FTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHL 701
Query: 1992 KKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTRCLELVHMDLMG 1813
+ + +++ AV G+P L ++ +C CQ GKQ ++SHQ H T+R LEL+HMDLMG
Sbjct: 702 RGMKKILDKSAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMG 761
Query: 1812 PIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNLYNLTVARIRSD 1633
P+++ES+GG++Y+YV+VDDFSR+TW F+REKS TF+ F+ ++ + + RIRSD
Sbjct: 762 PMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSGTFEVFKKLSLRLQREKDCVIKRIRSD 821
Query: 1632 HGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVMLSSKKLSKRFW 1453
HG+EFENS F FC +GI+HEFSA TPQQNG+ ERKNRTLQE RVML +K+L W
Sbjct: 822 HGREFENSRFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLW 881
Query: 1452 AEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLNDRDNLGKFDSK 1273
AEA+NTAC+I NRV LR G T YEI G+KP++K+FH+FG CY+L DR+ K D K
Sbjct: 882 AEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPK 941
Query: 1272 SDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDHVDLLEFVETAPA 1093
SD +FLGY++NS AYRV+N RT+T+MES+N+V DDLS K E+
Sbjct: 942 SDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLSPARKKDVEE------------- 988
Query: 1092 KDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEETNNPIVDRG 913
DV T +NV +A + + NAE + +A++ E+N D+
Sbjct: 989 -DVRTSG-DNVADAAKSGE-NAENSDSATD--------------------ESNINQPDKR 1025
Query: 912 SDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVRTCCFVSNFE 733
S TRIQ+ HP IIG+ G+ TR S + V CFVS E
Sbjct: 1026 SS--TRIQKMHPKELIIGDPNRGVTTR----------------SREVEIVSNSCFVSKIE 1067
Query: 732 PKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVR 553
PKNV EAL DEFWI++MQEEL+QF +N+VW LVPRPE NVIGTKWIFKNKT+E G I R
Sbjct: 1068 PKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKTNEEGVITR 1127
Query: 552 NKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLD 373
NKARLVAQGYTQ+EGVDFDETFAPVAR+ESIRLLL +AC L L+QMDVKSAFLN +L+
Sbjct: 1128 NKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKSAFLNGYLN 1187
Query: 372 EEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLF 193
EE +VEQPKGF DP P+HVY+LKKALYGLKQAPRAWY RLTE+L Q G+++G +DKTLF
Sbjct: 1188 EEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLF 1247
Query: 192 IQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKE 13
+++ ++MIAQIYVDDIVFG S+++L+ F+ M S FEMS+VGEL+YFLGLQ+KQ+++
Sbjct: 1248 VKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQVKQMED 1307
Query: 12 GIFI 1
IF+
Sbjct: 1308 SIFL 1311
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 887 bits (2291), Expect = 0.0
Identities = 504/1152 (43%), Positives = 671/1152 (58%), Gaps = 21/1152 (1%)
Frame = -3
Query: 3393 RFSGDKSNKSDTKTLDS--IRCRACTGYGHYAAQCANTLMKKGMSLTVTLSDNESDGEKN 3220
R + KSD K S I+C C GYGH A+C L K+ L+V SD+ +++
Sbjct: 282 RKGSEYHKKSDEKPSHSKGIQCHGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQES 341
Query: 3219 DQEENKVLTTLVKNRKSLQINPSGVARGVARDVITPSLITSEVTSDEHDLSSISNHFCFN 3040
D + RDV + +T SDE D S I F+
Sbjct: 342 DSD---------------------------RDV---NALTGRFESDE-DSSDIE--ITFD 368
Query: 3039 STSVPXXXXXXXXXXXXXXXDTYANLYKDWLKRIKVNEMLKKENDRLTKENDDQREVVTR 2860
++ +Y L K ++ LKK L E + E ++
Sbjct: 369 ELAI-----------------SYRKLCIKSEKILQQEAQLKKVIANLEAEKEAHEEEISE 411
Query: 2859 LEASLTXXXXXXXXXXXXXXXXXXXXKRFNSGKAKLDDILSMGSD--DKTGLGYK----- 2701
L+ + K N G LD++L +G + ++ GLG+
Sbjct: 412 LKGEV-------GFLNSKLENMTKSIKMLNKGSDMLDEVLQLGKNVGNQRGLGFNHKSAC 464
Query: 2700 ---TPVFVKAKEQ-GESSDSSNNKMIFSQKSKPRKRHFICHYCHAPGHIKPFCYKLKSDL 2533
FV AK G + ++ +Q+ K +++ + CHYC GHIKPFCY L
Sbjct: 465 RITMTEFVPAKNSTGATMSQHRSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHP 524
Query: 2532 RSGRQMSS---QMLRHPRNHFXXXXXXXXXXXKCHVIYTSLRSNVAGSWYFDSGCSRHMT 2362
G Q SS +M+ P++ V++TSLR++ WY DSGCSRHMT
Sbjct: 525 HHGTQSSSSGRKMMWVPKHKIVSL-----------VVHTSLRASAKEDWYLDSGCSRHMT 573
Query: 2361 GTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHVVGLNANLISISQL 2182
G E+L + E + VT+G +KGKI G G L +GLP L +L V GL ANLISISQL
Sbjct: 574 GVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLLVKGLTANLISISQL 633
Query: 2181 CDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL-----CHRAHTNDTDLWH 2017
CD+ V F K+ C V +E ++ G RS DNCY + + C + ++ +WH
Sbjct: 634 CDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVKIWH 693
Query: 2016 QKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTRCLE 1837
Q+ GH+ + + +++ AV G+P L ++ +C CQ GKQ ++SHQ H T+ LE
Sbjct: 694 QRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSMVLE 753
Query: 1836 LVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNLYNL 1657
L+HMDLMGP+++ES+GG++Y+YV+VDDFSR+TW F+REKS+TF+ F+ ++ +
Sbjct: 754 LLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDC 813
Query: 1656 TVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVMLSS 1477
+ RIRSDHG+EFENS F FC +GI+HEFSA TPQQNG+ ERKNRTLQE TRVML +
Sbjct: 814 VIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEATRVMLHA 873
Query: 1476 KKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLNDRD 1297
K+L WAEA+NTAC+I NRV LR G T YEI G+KP +K+FH+FG CY+L DR+
Sbjct: 874 KELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADRE 933
Query: 1296 NLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDHVDLL 1117
K D KSD +FLGY++NS AYRV+N RT+T+MES+N+V DDL+ K E+ V
Sbjct: 934 QRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDVRTS 993
Query: 1116 EFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEET 937
E AK EN ++ ST D EPN+ +
Sbjct: 994 EDNVADTAKSA-----ENAEKSDSTTD---EPNINQPD---------------------- 1023
Query: 936 NNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVRT 757
+P + RIQ+ P IIG+ G+ TR S + V
Sbjct: 1024 KSPFI--------RIQKMQPKELIIGDPNRGVTTR----------------SREIEIVSN 1059
Query: 756 CCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNKT 577
CFVS EPKNV EAL DEFWI++MQEEL+QF +N+VW LVPRPE NVIGTKWIFKNKT
Sbjct: 1060 SCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNKT 1119
Query: 576 DESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVKS 397
+E G I RNKARLVAQGYTQ+EGVDFDETFAPVAR+ESIRLLL +AC L L+QMDVKS
Sbjct: 1120 NEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGVACILKFKLYQMDVKS 1179
Query: 396 AFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFKR 217
AFLN +L+EEA+VEQPKGF DP +HVY+LKKALYGLKQAPRAWY RLTE+L Q G+++
Sbjct: 1180 AFLNGYLNEEAYVEQPKGFVDPTHLDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYRK 1239
Query: 216 GEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFLG 37
G +DKTLF+++ ++MIAQIYVDDIVFG S+++L+ F+ M S FEMS+VGEL YFLG
Sbjct: 1240 GGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVPQMQSEFEMSLVGELHYFLG 1299
Query: 36 LQIKQLKEGIFI 1
LQ+KQ+++ IF+
Sbjct: 1300 LQVKQMEDSIFL 1311
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 877 bits (2266), Expect = 0.0
Identities = 496/1153 (43%), Positives = 669/1153 (58%), Gaps = 22/1153 (1%)
Frame = -3
Query: 3393 RFSGDKSNKSDTKTLDS--IRCRACTGYGHYAAQCANTLMKKGMSLTVTLSDN-ESDGEK 3223
R + +SD K S I+C C GYGH A+C L K+ L+V SD+ ES+ E
Sbjct: 254 RKGSEYQKRSDEKPSHSKGIQCHGCEGYGHIKAECPTHLKKQRKGLSVCRSDDTESEQES 313
Query: 3222 NDQEENKVLTTLVKNRKSLQINPSGVARGVARDVITPSLITSEVTSDEHDLSSISNHFCF 3043
+ + LT ++ + S SE+T DE +S C
Sbjct: 314 DSDRDVNALTGRFESAED------------------SSDTDSEITFDELAISY--RELCI 353
Query: 3042 NSTSVPXXXXXXXXXXXXXXXDTYANLYKDWLKRIKVNEMLKKENDRLTKENDDQREVVT 2863
S + ++ LKK L E + + ++
Sbjct: 354 KSEKI-----------------------------LQQEAQLKKVIANLEAEKEAHEDEIS 384
Query: 2862 RLEASLTXXXXXXXXXXXXXXXXXXXXKRFNSGKAKLDDILSMGSD--DKTGLGYK---- 2701
L+ + K N G LD++L +G + ++ GLG+
Sbjct: 385 ELKGEI-------GFLNSKLENMTKSIKMLNKGSDLLDEVLQLGKNVGNQRGLGFNHKSA 437
Query: 2700 ----TPVFVKAKEQ-GESSDSSNNKMIFSQKSKPRKRHFICHYCHAPGHIKPFCYKLKSD 2536
FV AK G + ++ +Q+ K +++ + CHYC GHIKPFCY L
Sbjct: 438 GRTTMTEFVPAKNSTGATMSQHRSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGH 497
Query: 2535 LRSGRQMSS---QMLRHPRNHFXXXXXXXXXXXKCHVIYTSLRSNVAGSWYFDSGCSRHM 2365
G Q SS +M+ P++ V++TSLR++ WY DSGCSRHM
Sbjct: 498 PHHGTQSSSSGRKMMWVPKHKTVSL-----------VVHTSLRASAKEDWYLDSGCSRHM 546
Query: 2364 TGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHVVGLNANLISISQ 2185
TG E+L + E + VT+G +KGKI G G L +GLP L +L V GL ANLISISQ
Sbjct: 547 TGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLLVKGLTANLISISQ 606
Query: 2184 LCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL-----CHRAHTNDTDLW 2020
LCD+ V F K+ C V +E ++ G RS DNCY + + C + ++ +W
Sbjct: 607 LCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLFSKEDEVKIW 666
Query: 2019 HQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTRCL 1840
HQ+ GH+ + + +++ AV G+P L ++ +C CQ GKQ ++S+Q H T+R L
Sbjct: 667 HQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQIGKQVKMSNQKLQHQTTSRVL 726
Query: 1839 ELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNLYN 1660
EL+HMDLMGP+++ES+G ++Y+YV+VDDFSR+TW F+REKS+TF+ F+ ++ +
Sbjct: 727 ELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKD 786
Query: 1659 LTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVMLS 1480
+ RIRSDHG+EFENS F FC +GI+HEFSA TPQQNG+ ERKNRTLQE RVML
Sbjct: 787 CVIKRIRSDHGREFENSKFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLH 846
Query: 1479 SKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLNDR 1300
+K+L WAEA+NTAC+I NRV LR G T YEI G+KP +K+FH+ G CY+L DR
Sbjct: 847 AKELPYNLWAEAMNTACYIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHICGSPCYILADR 906
Query: 1299 DNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDHVDL 1120
+ K D KSD +FLGY++NS AYRV+N RT+T+MES+N+V DDL+ K E+ V
Sbjct: 907 EQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDV-- 964
Query: 1119 LEFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEE 940
+ D D ++ A ++ + EPN+
Sbjct: 965 ------RTSGDNVADTAKSAENAENSDSATDEPNI------------------------- 993
Query: 939 TNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVR 760
N P D+ I RIQ+ HP IIG+ G+ TR S + +
Sbjct: 994 -NQP--DKRPSI--RIQKMHPKELIIGDPNRGVTTR----------------SREIEIIS 1032
Query: 759 TCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNK 580
CFVS EPKNV EAL DEFWI++MQEEL+QF +N+VW LVPRPE NVIGTKWIFKNK
Sbjct: 1033 NSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKWIFKNK 1092
Query: 579 TDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVK 400
T+E G I RNKARLVAQGYTQ+EGVDFDETFAP AR+ESIRLLL +AC L L+QMDVK
Sbjct: 1093 TNEEGVITRNKARLVAQGYTQIEGVDFDETFAPGARLESIRLLLGVACILKFKLYQMDVK 1152
Query: 399 SAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFK 220
SAFLN +L+EEA+VEQPKGF DP P+HVY+LKKALYGLKQAPRAWY RLTE+L Q G++
Sbjct: 1153 SAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLTQQGYR 1212
Query: 219 RGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFL 40
+G +DKTLF+++ ++MIAQIYVDDIVFG S+++L+ F+ M S FEMS+VGEL+YFL
Sbjct: 1213 KGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFL 1272
Query: 39 GLQIKQLKEGIFI 1
GLQ+KQ+++ IF+
Sbjct: 1273 GLQVKQMEDSIFL 1285
>ref|XP_010451516.1| PREDICTED: uncharacterized protein LOC104733649 [Camelina sativa]
Length = 2103
Score = 837 bits (2162), Expect = 0.0
Identities = 500/1241 (40%), Positives = 687/1241 (55%), Gaps = 62/1241 (4%)
Frame = -3
Query: 3537 DDSMAMYLKKFDRILKLKSQKKSQNFTKP-FKSESSKFPQKHTFDKSQ----ERFSGDKS 3373
++ + + +KK+ R K ++ + T P KS++ K +K + Q E F KS
Sbjct: 243 EEKVGLLVKKYFR----KMERGQRKGTSPVLKSDTDKEIRKGDKQERQCAECEGFGHYKS 298
Query: 3372 NKSDTKTLDSIRCRACTGYGHYAAQCANTLMKKGMSLTVTLSDNESDGEKNDQEENKVLT 3193
+ K +S++C C GYGH C + K+ +T + SD++ + K + VL
Sbjct: 299 ECPNNKRKNSLQCYGCKGYGHTKFDCPSRENKQKSYITWSESDSDEEVGKGE-----VLN 353
Query: 3192 TLVKNRKSLQINPSGVARGVARDVITPSLITSEVTSDEHDLSSISNHFCFNSTSVPXXXX 3013
+ + ++ + +DV + S+ +E DLS
Sbjct: 354 SFLALLGVIEEDEEDDVVLEIKDV--DEKVNSDSEGEEADLS------------------ 393
Query: 3012 XXXXXXXXXXXDTYANLYKDWLKR-IKVNEMLKKENDRLTKENDDQREVVTRLEASLTXX 2836
+D ++ IK ++N +LT + D + V + L+
Sbjct: 394 -----------------VEDQIELLIKTVVQKTQDNTQLTSKRDTLQLHVAMISKELSEE 436
Query: 2835 XXXXXXXXXXXXXXXXXXKRFNSGKAKLDDILSMG--SDDKTGLGYK------TPVFVK- 2683
+ N G LD +LS G S+ K GLGY+ T FVK
Sbjct: 437 KAKTLRLEKQLDEQLKNIRMLNKGTKDLDTLLSTGRSSNLKWGLGYQGTNTNPTTKFVKG 496
Query: 2682 ---AKEQGESS---------------DSSNNKMI---------------FSQKSK---PR 2611
A EQ E + +S N +M+ F Q S+ R
Sbjct: 497 VESAPEQKERNFSQTTRRCDQAPVNPNSRNPRMVAFPEVNTRPPYVSSGFLQTSRRPVQR 556
Query: 2610 KRHFICHYCHAPGHIKPFCYKLKSDLRSGRQMSSQMLRHPRNHFXXXXXXXXXXXKCHVI 2431
R C YC H K CY+ ++ + + R+ + + CHV
Sbjct: 557 SRRRGCWYCGHLTHYKAQCYQFQNRVMQRCAFYPAVRRNTQEYVRKDDLY------CHVA 610
Query: 2430 YTSLRSNV-AGSWYFDSGCSRHMTGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTLNVE 2254
+T+ ++ WYFDSGCSRHMTG + L+ E GG VT+G KG I GKGT E
Sbjct: 611 FTAEKTEADQAKWYFDSGCSRHMTGARDNLSHLEGVAGGRVTFGDGGKGTIRGKGTTGGE 670
Query: 2253 GLPKLRNMLHVVGLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQ 2074
P L+++ V GL ANLISISQLCD+ L V F K C+ D+ + L G RS +NCY
Sbjct: 671 SQPHLKDVFLVEGLKANLISISQLCDEGLDVTFTKKGCKAVDQQGSIQLRGRRSGNNCYM 730
Query: 2073 FCNDQLCHRAHTN-DTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRG 1897
+ + C DT+LWHQKLGH++ + +M+L E V G+PKL +C C +G
Sbjct: 731 WKSSIQCFNTTAELDTELWHQKLGHLNIRTMMKLANQEVVRGIPKLKSDPHFICGPCNKG 790
Query: 1896 KQKRVSHQMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREK 1717
KQ + SH + T+ L+LVHMDLMGPI+++S+ GR++ +V+VDDF+RYTW FLREK
Sbjct: 791 KQIKTSHGPVTDIRTSHALQLVHMDLMGPIQVQSISGRRFIFVMVDDFTRYTWVRFLREK 850
Query: 1716 SETFDFFRSWHKKV-CNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQ 1540
++ + FR ++ Y++ V IRSDHG EF+N F FC +GI H++SAP+TP+Q
Sbjct: 851 ADALECFRILALQIKSEKYSIQV--IRSDHGGEFQNDKFDQFCGNQGIVHQYSAPRTPEQ 908
Query: 1539 NGVAERKNRTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGK 1360
NGV ERKNRTLQE+ R ML ++ RFW EA+NTAC+I NRVY+RPG S TPYE+ GK
Sbjct: 909 NGVVERKNRTLQEMARAMLHGNQVPHRFWDEAVNTACYIINRVYVRPGTSKTPYELWKGK 968
Query: 1359 KPNLKYFHVFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVN 1180
P + YFHVFGC+CY+LND+D LGKFDSKSD+ +FLGY+ +S A+RVYN RT+++ E+VN
Sbjct: 969 PPTVSYFHVFGCLCYILNDKDQLGKFDSKSDEGIFLGYSGHSTAFRVYNKRTRSVQETVN 1028
Query: 1179 IVFDDLSDIAGKSEEDHVDLLEFVETAPAKDVGTDVMENVTEAPSTAD-SNAEPNVTASE 1003
+VFDD S ++ V KD+ TD ++ + S +D + P ++ E
Sbjct: 1029 VVFDDTS----------FQRIDMVPVLSDKDLVTDDEKSEQASESFSDHTGTSPGLSPDE 1078
Query: 1002 PTXXXXXXXXXXXXDFEPIEETNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIKTRGKG 823
+++ RNH + +IG G TRGK
Sbjct: 1079 LPP------------------------------SSQVHRNHSSGDVIGAIQGGRVTRGK- 1107
Query: 822 RVNYRDMVRMV-------CLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQ 664
++++ + ++ D V+ CFVS EPKN EAL+DEFW+ +MQ+EL+Q
Sbjct: 1108 QIDFAQLAGRKQKTAVPDTVTQDSEIVQFACFVSTMEPKNHKEALRDEFWVAAMQDELEQ 1167
Query: 663 FVKNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFA 484
F ++DVW L RP +VN++GTKWIFKNK+D SG IVRNKARLVAQGY+QVEGVDFDETFA
Sbjct: 1168 FERSDVWELTKRPANVNIVGTKWIFKNKSDASGCIVRNKARLVAQGYSQVEGVDFDETFA 1227
Query: 483 PVARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKL 304
PVAR+ESIR + +AC L TLHQMDVKSAFLN L EE FVEQPKGFE+P P HVY+L
Sbjct: 1228 PVARLESIRFMFGMACALKFTLHQMDVKSAFLNGILQEEVFVEQPKGFENPQHPEHVYRL 1287
Query: 303 KKALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSS 124
KKALYGLKQAPRAWY RLT +LL G+ RG VDKTLF+ N +M QIYVDDI+FGS+
Sbjct: 1288 KKALYGLKQAPRAWYERLTTFLLDQGYVRGSVDKTLFVLNNNKALMFVQIYVDDIIFGST 1347
Query: 123 SDKLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
L++ F+ MS FEMSMVGEL YFLGLQ++Q +GIF+
Sbjct: 1348 CQSLVQRFVKNMSQEFEMSMVGELKYFLGLQVEQSADGIFV 1388
Score = 370 bits (951), Expect = e-103
Identities = 184/307 (59%), Positives = 227/307 (73%), Gaps = 7/307 (2%)
Frame = -3
Query: 900 TRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMV-------CLSTDCTNVRTCCFVS 742
+++ RNH + +IG G TRGK ++++ + ++ D V+ CFVS
Sbjct: 1573 SQVHRNHSSGDVIGAIQGGRVTRGK-QIDFAQLAGRKQKTAVPDTVTQDSEIVQFACFVS 1631
Query: 741 NFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNKTDESGK 562
EPKN EAL+DEFW+ +MQ+EL+QF ++DVW L RP +VN++GTKWIFKNK+D SG
Sbjct: 1632 TMEPKNHKEALRDEFWVAAMQDELEQFERSDVWELTKRPANVNIVGTKWIFKNKSDASGC 1691
Query: 561 IVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVKSAFLNE 382
IVRNKARLVAQGY+QVEGVDFDETFAPVAR+ESIR + +AC L TLHQMDVKSAFLN
Sbjct: 1692 IVRNKARLVAQGYSQVEGVDFDETFAPVARLESIRFMFGMACALKFTLHQMDVKSAFLNG 1751
Query: 381 FLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDK 202
L EE FVEQPKGFE+P P HVY+LKKALYGLKQAPRAWY RLT +LL G+ RG VDK
Sbjct: 1752 ILQEEVFVEQPKGFENPQHPEHVYRLKKALYGLKQAPRAWYERLTTFLLDQGYVRGSVDK 1811
Query: 201 TLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFLGLQIKQ 22
TLF+ N +M QIYVDDI+FGS+ L++ F+ MS FEMSMVGEL YFLGLQ++Q
Sbjct: 1812 TLFVLNNNKALMFVQIYVDDIIFGSTCQSLVQRFVKNMSQEFEMSMVGELKYFLGLQVEQ 1871
Query: 21 LKEGIFI 1
+GIF+
Sbjct: 1872 SADGIFV 1878
>gb|KYP64004.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1021
Score = 741 bits (1913), Expect = 0.0
Identities = 386/806 (47%), Positives = 520/806 (64%), Gaps = 7/806 (0%)
Frame = -3
Query: 2397 WYFDSGCSRHMTGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHVV 2218
WY +SGCS+HMTG D+ G+VTYG +GKI+G G + + N+L V
Sbjct: 1 WYINSGCSKHMTGDASKFIDFTPKRSGHVTYGDNNRGKILGIGKIGTNFSTSIENVLLVD 60
Query: 2217 GLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCI-LTGLRSSDNCYQFCNDQ-----L 2056
GL +L+S+SQLCD V F+ C + +ND + + G R + N Y+ +
Sbjct: 61 GLKHSLLSVSQLCDKGFSVSFDSQKCLIEHKNDKQVKIVGFRIN-NVYKIKIENNPKHSQ 119
Query: 2055 CHRAHTNDTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSH 1876
C + +++ LWH+++ H++ + L +L+ + VIGLPK+ + +C++CQ+GKQ +VS
Sbjct: 120 CLMSKNDESWLWHKRIAHINMEHLNKLISKDLVIGLPKIKFEKNKLCDACQKGKQVKVSF 179
Query: 1875 QMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFF 1696
+ + TTR LEL+HMDL GP S GG Y V+VDDFSRYTWT FL KS+TF F
Sbjct: 180 KPKNIVTTTRPLELLHMDLFGPSRTMSFGGSYYGLVLVDDFSRYTWTLFLANKSDTFGVF 239
Query: 1695 RSWHKKVCNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKN 1516
R + K + N NL + IRSDHGKEFEN F FC+ GI H FSAP+TPQQNGV ERKN
Sbjct: 240 RKFAKLIQNKKNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERKN 299
Query: 1515 RTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFH 1336
R+L+E+ R ML+ KL K FWAEA+NTAC+ NR +RP TPYE+ G+KPN+ + H
Sbjct: 300 RSLEELARTMLNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELFNGRKPNISHLH 359
Query: 1335 VFGCVCYVLND-RDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLS 1159
+FGC C+VLN+ +DNLGKFD+KSD+ +FLGY+ NS ++R+YN RT TI ES+++VFD+ +
Sbjct: 360 IFGCKCFVLNNGKDNLGKFDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESIHVVFDETN 419
Query: 1158 DIAGKSEEDHVDLLEFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXX 979
+ P +D+ +++E+ + ++ + E +
Sbjct: 420 LVC-----------------PRRDIIDEIVESFEDTHINEQTHKDDKDKEKEDST----- 457
Query: 978 XXXXXXDFEPIEETNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMV 799
I+E I S RI RNHP IIG+ T G+ TR
Sbjct: 458 ----------IQEGQTNI---NSQREWRISRNHPLENIIGDITKGVITRNS--------- 495
Query: 798 RMVCLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPED 619
L C N+ FVS E KN+ EAL DE WI++MQEEL+QF +N VW LV RP +
Sbjct: 496 ----LKEACNNMS---FVSEIEVKNIDEALNDEHWINAMQEELNQFERNQVWDLVNRPTN 548
Query: 618 VNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIA 439
+IGTKWIF+NK DE G ++RNKARLVA+GY Q EG+D++ET+APVAR+E+IR+LLA A
Sbjct: 549 HPIIGTKWIFRNKLDEHGLVIRNKARLVAKGYNQEEGIDYEETYAPVARLEAIRMLLAYA 608
Query: 438 CYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWY 259
+ L+QMDVKSAFLN F+ EE +VEQP GFE+ PNHV+KLKKALYGLKQAPRAWY
Sbjct: 609 SIMDFKLYQMDVKSAFLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALYGLKQAPRAWY 668
Query: 258 GRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSST 79
RL+++LL+ F RG+VD TLFI+RK +DI++ QIYVDDI+FG+++D L KEF M S
Sbjct: 669 ERLSKFLLEKEFTRGKVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEFSNDMQSE 728
Query: 78 FEMSMVGELSYFLGLQIKQLKEGIFI 1
FEMSM+GEL++FLGLQI+Q K GIFI
Sbjct: 729 FEMSMMGELNFFLGLQIRQTKNGIFI 754
>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 772
Score = 694 bits (1791), Expect = 0.0
Identities = 373/800 (46%), Positives = 495/800 (61%), Gaps = 11/800 (1%)
Frame = -3
Query: 2367 MTGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTL-NVEGLPKLRNMLHVVGLNANLISI 2191
MTG + ++ N G VTYG KGKI+G G + N + N+L V GL NL+SI
Sbjct: 1 MTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNPSSQTLIENVLLVDGLKHNLLSI 60
Query: 2190 SQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQF-------CNDQLCHRAHTND 2032
SQL D ++F+ C + D+ I + DN Y ++ C +
Sbjct: 61 SQLSDKGFKIEFDNTCCLICDKKSKEIRFIGKRIDNIYMLDLEHSIAISNTKCLITQEEN 120
Query: 2031 TDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHT 1852
LWH++ H+ L +L + E VIGLPKL +C++CQ+GKQ + S + + T
Sbjct: 121 IWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFGKEKLCDACQKGKQVKASFKSKNQIST 180
Query: 1851 TRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVC 1672
TR L+L+HMDL GP S+GG Y VIVDD+SRYTW FL K++ F+ FR + K V
Sbjct: 181 TRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFLANKNDAFNAFRKFAKLVQ 240
Query: 1671 NLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITR 1492
N + IRSDHG EF+N F FC+ GI+H FSAP+TPQQNGV ERKNR+L+E+ R
Sbjct: 241 NEKCSNITSIRSDHGGEFQNMMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLEELAR 300
Query: 1491 VMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYV 1312
ML+ L K FWA+A+NTACH+ N+V +RP TPYEI G+KPN+ YF VFGC CYV
Sbjct: 301 TMLNETNLPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNGRKPNISYFRVFGCKCYV 360
Query: 1311 LND-RDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEE 1135
LN+ ++ LGKFD+K+D+ +FLGY++NS AYR+YN RT + ESV++VFD+ + K E
Sbjct: 361 LNNGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDE----SNKQET 416
Query: 1134 DHVDLLEFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDF 955
++ + E + ++EN EPN E
Sbjct: 417 RQTEIEDLTEL-----LDQSLLEN------------EPNEVPKE---------------- 443
Query: 954 EPIEETNNPIVDRGSDIPT--RIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLS 781
E++ + +P R R+ IIGN G+ TR ++ +C
Sbjct: 444 ---SESHEKAKETCEQLPKEWRTSRDLSMDNIIGNIGKGVSTRSA--------IKNIC-- 490
Query: 780 TDCTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGT 601
T FVS EPK++ EALKDE W+ +MQEEL+QF +N+VW LVP P+D +IGT
Sbjct: 491 ------NTMAFVSQVEPKSIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGT 544
Query: 600 KWIFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLT 421
KW+F+NK DESG I+RNKARLVA+GY Q EG+D+DETFAPVARIE+IRLLLA +
Sbjct: 545 KWVFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSIKNFK 604
Query: 420 LHQMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEY 241
L+QMDVKSAFLN + EE +VEQP GF D PNHVYKLKKALYGLKQAPR+WY RL+++
Sbjct: 605 LYQMDVKSAFLNGLIQEEVYVEQPPGFVDFKNPNHVYKLKKALYGLKQAPRSWYDRLSKF 664
Query: 240 LLQIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMV 61
L++ ++RG+VD TLF+++ +D M QIYVDDIVFGS++ L KEF M FEMSM+
Sbjct: 665 LIENDYERGKVDNTLFVKKFKNDTMYVQIYVDDIVFGSTNTSLCKEFAKTMQGEFEMSMM 724
Query: 60 GELSYFLGLQIKQLKEGIFI 1
GEL++FLGLQIKQ+ EGIFI
Sbjct: 725 GELTFFLGLQIKQMNEGIFI 744
>gb|KYP50151.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1006
Score = 684 bits (1765), Expect = 0.0
Identities = 369/798 (46%), Positives = 489/798 (61%), Gaps = 9/798 (1%)
Frame = -3
Query: 2367 MTGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTL-NVEGLPKLRNMLHVVGLNANLISI 2191
MTG + ++ N G VTYG KGKI+G G + N + N+L V GL NL+SI
Sbjct: 1 MTGDPSKFSSLKLKNEGYVTYGDNNKGKILGHGNVGNSSSQTLIENVLLVEGLKHNLLSI 60
Query: 2190 SQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQF-------CNDQLCHRAHTND 2032
SQL D ++F+ C + D+ I + DN Y ++ C
Sbjct: 61 SQLSDKGFKIEFDNTCCLICDKRSKEIRFIGKRIDNIYMLDLEHSITMSNTKCLITQEES 120
Query: 2031 TDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHT 1852
LWH++ H+ L +L + E V+GLPKL +C++CQ+GKQ + S + + T
Sbjct: 121 IWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFGKDKLCDACQKGKQVKASFKSKNQIST 180
Query: 1851 TRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVC 1672
+R L+L+HMDL G S+G Y VIVDD+SRYTW FL K++ F+ FR + K V
Sbjct: 181 SRPLQLIHMDLFGSSRTMSLGRNYYGLVIVDDYSRYTWVMFLANKNDAFNAFRKFAKLVQ 240
Query: 1671 NLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITR 1492
N + IRSDHG EF+N F FC+ GI+H FSAP+TPQQNGV ERKNR+L+E+ R
Sbjct: 241 NEKCSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGVVERKNRSLEELAR 300
Query: 1491 VMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYV 1312
ML+ L K FWA+A+NT+CH+ N+V +RP PYEI GKKPN+ YF VFGC CYV
Sbjct: 301 TMLNKTNLPKYFWADAINTSCHVLNKVLIRPILKKIPYEIYKGKKPNISYFRVFGCKCYV 360
Query: 1311 LND-RDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEE 1135
LN+ + LGKFD+K+D+ +FLGY++NS +YR+YN RT + ESV++VFD+ + K E
Sbjct: 361 LNNGNEQLGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEESVHVVFDE----SNKQTE 416
Query: 1134 DHVDLLEFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDF 955
+E++TE +EPN + E
Sbjct: 417 ---------------------IEDLTELLDQPLLESEPNEKSKES--------------- 440
Query: 954 EPIEETNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTD 775
EP E+ V + + R+ IIGN G+ TR ++ +C
Sbjct: 441 EPHEKARETCVQLPKE--WKASRDLSMDNIIGNIGKGVTTRSA--------IKNIC---- 486
Query: 774 CTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKW 595
T FVS EPKN+ EALKDE W+ +MQEEL+QF +N+VW LVP P+D +IGTKW
Sbjct: 487 ----NTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQFERNEVWDLVPLPKDYPIIGTKW 542
Query: 594 IFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLH 415
+F+NK DESG I+RNKARLVA+GY Q EG+D+DETFAPVARIE+IRLLLA + L+
Sbjct: 543 VFRNKLDESGIILRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSLKNFKLY 602
Query: 414 QMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLL 235
QMDVKSAFLN + EE +VEQP GFED PNHVYKLKKALYGLKQAPR+WY RL+++L+
Sbjct: 603 QMDVKSAFLNGLIQEEVYVEQPPGFEDFKNPNHVYKLKKALYGLKQAPRSWYDRLSKFLI 662
Query: 234 QIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGE 55
+ ++RG+VD TLF++R +D M QIYVDDIVFGS++ L KEF M FEMSM+GE
Sbjct: 663 ENDYERGKVDNTLFVKRFKNDTMYVQIYVDDIVFGSTNSSLCKEFAKTMQGEFEMSMMGE 722
Query: 54 LSYFLGLQIKQLKEGIFI 1
L++FLGLQIKQ+ +G FI
Sbjct: 723 LTFFLGLQIKQMHDGTFI 740
>gb|KYP66812.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 900
Score = 672 bits (1735), Expect = 0.0
Identities = 345/676 (51%), Positives = 454/676 (67%), Gaps = 1/676 (0%)
Frame = -3
Query: 2025 LWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTR 1846
LWH+++ H++ + L +L+ + VIGLPK+ + +C++CQ+GKQ +VS + + TTR
Sbjct: 9 LWHKRIAHINMEHLNKLISKDLVIGLPKIKFEKNKLCDACQKGKQVKVSFKPKNIVTTTR 68
Query: 1845 CLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNL 1666
LEL+HMDL GP S GG Y V+VDDFSRYTWT FL KS+TF FR + K + N
Sbjct: 69 PLELLHMDLFGPSRTMSFGGSYYGLVLVDDFSRYTWTLFLANKSDTFGVFRKFAKLIQNK 128
Query: 1665 YNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVM 1486
NL + IRSDHGKEFEN F FC+ GI H FSAP+TPQQNGV ERKNR+L+E+ R M
Sbjct: 129 KNLKIVSIRSDHGKEFENKDFDLFCEENGIEHNFSAPRTPQQNGVVERKNRSLEELARTM 188
Query: 1485 LSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLN 1306
L+ KL K FWAEA+NTAC+ NR +RP TPYE+ G+KPN+ + H+FGC C+VLN
Sbjct: 189 LNDSKLPKYFWAEAVNTACYTMNRALIRPILKKTPYELFNGRKPNISHLHIFGCKCFVLN 248
Query: 1305 D-RDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDH 1129
+ +DNLGKFD+KSD+ +FLGY+ NS ++R+YN RT TI ESV++VFD+ + +
Sbjct: 249 NGKDNLGKFDAKSDEGIFLGYSLNSKSFRIYNKRTMTIEESVHVVFDETNLVC------- 301
Query: 1128 VDLLEFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEP 949
P +DV +++E+ + ++ + E +
Sbjct: 302 ----------PRRDVFDEIVESFEDTHLNEQTHKDDKDKEKEDST--------------- 336
Query: 948 IEETNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCT 769
I+E I S+ RI RNHP IIG+ T G+ TR L C
Sbjct: 337 IQEGQTNI---NSEREWRISRNHPLENIIGDITKGVITRNS-------------LKEACN 380
Query: 768 NVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIF 589
N+ FVS E KN+ EAL DE WI++MQEEL+QF +N VW LV RP + +IGTKWIF
Sbjct: 381 NMS---FVSEIEVKNIDEALNDEHWINAMQEELNQFERNQVWDLVNRPTNHPIIGTKWIF 437
Query: 588 KNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQM 409
+NK DE G ++RNKARLVA+GY Q EG+D++ET+APVAR+E+IR+LLA A + L+QM
Sbjct: 438 RNKLDEHGLVIRNKARLVAKGYNQEEGIDYEETYAPVARLEAIRMLLAYASIMDFKLYQM 497
Query: 408 DVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQI 229
DVKSAFLN F+ EE +VEQP GFE+ PNHV+KLKKALYGLKQAPRAWY RL+++LL+
Sbjct: 498 DVKSAFLNGFIQEEVYVEQPPGFENSEFPNHVFKLKKALYGLKQAPRAWYERLSKFLLEK 557
Query: 228 GFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELS 49
F RG+VD TLFI+RK +DI++ QIYVDDI+FG+++D L KEF M S FEMSM+GEL+
Sbjct: 558 EFTRGKVDTTLFIKRKMNDILLVQIYVDDIIFGATNDYLCKEFSNDMQSEFEMSMMGELN 617
Query: 48 YFLGLQIKQLKEGIFI 1
+FLGLQI+Q K GIFI
Sbjct: 618 FFLGLQIRQTKNGIFI 633
>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
aspartic, catalytic [Medicago truncatula]
Length = 1715
Score = 690 bits (1781), Expect = 0.0
Identities = 359/812 (44%), Positives = 503/812 (61%), Gaps = 12/812 (1%)
Frame = -3
Query: 2400 SWYFDSGCSRHMTGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHV 2221
SWY DSGCSRHMTG + +GG V +GG GKI+G GT+ + + N+ V
Sbjct: 669 SWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSI-SINNVWLV 727
Query: 2220 VGLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL----- 2056
GL NL+SISQ CD+ V F+K +C + +++D I + +N Y+ L
Sbjct: 728 DGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKV 787
Query: 2055 -CHRAHTNDTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVS 1879
C + + +WH++LGH + + + ++ K + V GLP + S ++C +CQ+GK + S
Sbjct: 788 VCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSS 847
Query: 1878 HQMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDF 1699
+ T+R LEL+H+DL GP+ S+ G KY VIVDD+SR+TW F++ K +
Sbjct: 848 FKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEV 907
Query: 1698 FRSWHKKVCNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERK 1519
F S+ ++ + L + ++RSDHG EFEN F FC++ GI HEFS+P+TPQQNGV ERK
Sbjct: 908 FSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERK 967
Query: 1518 NRTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYF 1339
NRTLQE+ R M+ L+K FWAEA+NT+C+I NR+Y+RP T YE+ G++PN+ YF
Sbjct: 968 NRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYF 1027
Query: 1338 HVFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLS 1159
H FGC CY+LN +D L KFD+K+ + +FLGY+ S AYRVYN T+ + ES+++ FDD
Sbjct: 1028 HQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDRE 1087
Query: 1158 DIAGKSEEDHVDLLEFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXX 979
+ SE+ + GT E+ +E+ +DS V +
Sbjct: 1088 PGSKTSEQSE------------SNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPEA 1135
Query: 978 XXXXXXDFEPIEETNNPIVDRGSDIPTRIQ------RNHPTSQIIGNTTDGIKTRGKGRV 817
+ P + + D + IQ +HP IIG+ +TR
Sbjct: 1136 ESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRS---- 1191
Query: 816 NYRDMVRMVCLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFL 637
++R ++ L +S EPK V EAL D+ WI +MQEEL+QF +NDVW L
Sbjct: 1192 HFRQEESLIGL------------LSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDL 1239
Query: 636 VPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIR 457
VP+P N+IGTKW+F+NK +E G++ RNKARLVAQGY+Q EG+D+ ETFAPVAR+E+IR
Sbjct: 1240 VPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIR 1299
Query: 456 LLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQ 277
LLL+ A G+ L+QMDVKSAFLN ++EE +V+QP GFED P+HVYKLKK+LYGLKQ
Sbjct: 1300 LLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQ 1359
Query: 276 APRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFI 97
APRAWY RL+ +L++ F+RG+VD TLF + DI+I QIYVDDI+FGS++ L KEF
Sbjct: 1360 APRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFS 1419
Query: 96 ACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
M FEMSM+GEL +FLG+QI Q KEG+++
Sbjct: 1420 KLMQDEFEMSMMGELKFFLGIQINQSKEGVYV 1451
>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
Length = 898
Score = 657 bits (1695), Expect = 0.0
Identities = 340/715 (47%), Positives = 466/715 (65%), Gaps = 6/715 (0%)
Frame = -3
Query: 2127 ENDTCILTGLRSSD----NCYQFCNDQLCHRAHTNDTDLWHQKLGHVSHKKLMELVKYEA 1960
+ND I G R + N ++ + C + + + LWH++L H + + +L K E
Sbjct: 194 QNDKTIFMGHRCENVYAINISKYDDHDRCFSSMHDQSWLWHRRLRHANMDLISQLNKDEL 253
Query: 1959 VIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTRCLELVHMDLMGPIEIESVGGRK 1780
V GLPK++ + VCE+CQ GKQ + S + + T+R LEL+HMDL GP S+GG+
Sbjct: 254 VRGLPKINFQKDKVCEACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTPSLGGKS 313
Query: 1779 YSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNLYNLTVARIRSDHGKEFENSSFL 1600
Y YVIVDDFSRYTW FL +KSE F F + KV N T+ IRSDHG+EFEN F
Sbjct: 314 YVYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNEKGFTITCIRSDHGREFENFDFE 373
Query: 1599 TFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVMLSSKKLSKRFWAEALNTACHIA 1420
+C++ GI+H FSAP+TPQQNGV ERKNRTLQE+ R ML+ L K FWAE +NT+C++
Sbjct: 374 EYCNKHGINHNFSAPRTPQQNGVVERKNRTLQEMARTMLNENNLPKYFWAETVNTSCYVL 433
Query: 1419 NRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTS 1240
+R+ LRP TPYE+ KKPN+ YF VFGC C++LN +DNLGKFD+KSD +FLGY++
Sbjct: 434 SRILLRPILKKTPYELWKNKKPNISYFKVFGCKCFILNTKDNLGKFDAKSDVGIFLGYST 493
Query: 1239 NSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDHVDLLEFVETAPAKDVGTDVMENV 1060
+S +RV+N RT + ES++++F + ++ + E DL +ET+ K + +
Sbjct: 494 SSKVFRVFNKRTMVVEESIHVIFYESNNSLQERESFDDDL--GLETSMGK---LQIEDKR 548
Query: 1059 TEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEETNNPIVDRGSDIPT--RIQR 886
+ S D E + P +P++ ++ D+P +
Sbjct: 549 QQGKSGEDPKKEESPLTLPPP--------------QPVQGESS------QDLPKDWKFVI 588
Query: 885 NHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVRTCCFVSNFEPKNVVEALK 706
NHP QIIGN G++TR L C N+ F+ EPKN+ +A+
Sbjct: 589 NHPQDQIIGNPXSGVRTRSS-------------LRNICNNL---AFIXQIEPKNIKDAIV 632
Query: 705 DEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQG 526
DE W+ +MQEEL+QF +++VW LVPRP + +VIGTKW+F+NK DE+G IVRNKARLVAQG
Sbjct: 633 DENWMIAMQEELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQG 692
Query: 525 YTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPK 346
Y Q +D++ETFAPVAR+E+IR+LLA AC+ L+QMDVKS FLN F++EE + EQP
Sbjct: 693 YNQEXXIDYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSXFLNGFINEEVYXEQPP 752
Query: 345 GFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIM 166
GF+ PNHV+KLKKALYGLKQAPRAWY RL+++L + GFK G++D TLFI+ K D++
Sbjct: 753 GFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFLXKKGFKMGKIDTTLFIKTKEKDML 812
Query: 165 IAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
+ QIYVDDI+FG++++ L ++F CM S FEMSM+GEL++FLGLQIKQLKEG FI
Sbjct: 813 LVQIYVDDIIFGATNBSLCEDFSKCMHSEFEMSMMGELNFFLGLQIKQLKEGTFI 867
>gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 963
Score = 659 bits (1699), Expect = 0.0
Identities = 360/793 (45%), Positives = 484/793 (61%), Gaps = 4/793 (0%)
Frame = -3
Query: 2367 MTGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTL-NVEGLPKLRNMLHVVGLNANLISI 2191
MTG + ++ N VTYG K +I+G G + N L + N+L V GLN +I
Sbjct: 1 MTGDPSKFSSLKLKNERFVTYGDNNKWRILGHGNIGNSSSLTLIENVLLVEGLN--IIRF 58
Query: 2190 SQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQLCHRAHTNDTDLWHQK 2011
+ D++Y+ ++S + N C++T DN + LWH++
Sbjct: 59 IEKRIDNIYMLDLEHSIAI--SNTKCLIT---KEDNIW-----------------LWHRR 96
Query: 2010 LGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSHQMTSHFHTTRCLELV 1831
H+ L +L + E VIGLPKL +C++CQ+GKQ S + + TTR L+L+
Sbjct: 97 AAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQVEASFKRKNQISTTRPLQLI 156
Query: 1830 HMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFFRSWHKKVCNLYNLTV 1651
HMDL P S+GG Y VIVDD+SR+TW FL K+E F+ F+ + K V N N ++
Sbjct: 157 HMDLFDPPRTMSLGGNYYGLVIVDDYSRFTWVMFLANKNEAFNAFKKFTKLVQNEKNSSI 216
Query: 1650 ARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKNRTLQEITRVMLSSKK 1471
IRSDHG EF+N F FC+ I+H FSAP+TPQQNGV ER+NR+L+E+ R ML+ K
Sbjct: 217 TSIRSDHGGEFQNILFQKFCEEHDINHNFSAPRTPQQNGVVERRNRSLEELARTMLNETK 276
Query: 1470 LSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFHVFGCVCYVLND-RDN 1294
L K FWA+A+NTACH+ N+V +RP TPYEI G+KPN+ YF VFGC C+VLN+ ++
Sbjct: 277 LPKYFWADAINTACHVLNKVLIRPILKKTPYEIYNGRKPNISYFRVFGCKCFVLNNGKEQ 336
Query: 1293 LGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSDIAGKSEEDHVDLLE 1114
LGKFD+K+D+ +FLGY++NS AYRVYN RT + ESV+IVFD+ + K E
Sbjct: 337 LGKFDAKADEAIFLGYSTNSKAYRVYNKRTLIVEESVHIVFDETNKQETKQTE------- 389
Query: 1113 FVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEETN 934
+E++T+ +EPN E E+N
Sbjct: 390 --------------IEDLTDLLDQPLLESEPNEKPKE-------------------SESN 416
Query: 933 NPIVDRGSDIPT--RIQRNHPTSQIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVR 760
+ +P + R+ IIGN G+ TR ++ +C
Sbjct: 417 ETTENTSEQLPKEWKTSRDLSMENIIGNIGKGVSTRRA--------IKNIC--------N 460
Query: 759 TCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNK 580
FVS EPK + EAL+DE W+ +MQEEL+QF +N+VW LVP P D +IGTKW+F+NK
Sbjct: 461 VMAFVSQVEPKTIDEALQDEHWLMAMQEELNQFERNEVWDLVPLPTDYPIIGTKWVFRNK 520
Query: 579 TDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVK 400
DESG I+RNKARLVA+GY Q EG+D+DETFAPVARIE+IRLLLA + + L+QMDVK
Sbjct: 521 LDESGIIIRNKARLVAKGYNQEEGIDYDETFAPVARIEAIRLLLAYSSIMNFKLYQMDVK 580
Query: 399 SAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFK 220
SAFLN + EE +VEQP GF D PNHVYKLKKALYGLKQAPR+WY RL+++L++ +
Sbjct: 581 SAFLNGLIQEEVYVEQPPGFVDFKYPNHVYKLKKALYGLKQAPRSWYDRLSKFLIENDYV 640
Query: 219 RGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFL 40
RG+VD TLF+++ +D M QIYVDDIVFGS++ L KEF M FEMSM+GEL++FL
Sbjct: 641 RGKVDNTLFVKKFKNDTMYVQIYVDDIVFGSTNVSLCKEFAKTMQGEFEMSMMGELTFFL 700
Query: 39 GLQIKQLKEGIFI 1
GLQIKQ+ +GIFI
Sbjct: 701 GLQIKQMSDGIFI 713
>gb|AEL30380.1| hypothetical protein 205D04_20 [Arachis hypogaea]
Length = 1597
Score = 670 bits (1728), Expect = 0.0
Identities = 366/813 (45%), Positives = 489/813 (60%), Gaps = 14/813 (1%)
Frame = -3
Query: 2397 WYFDSGCSRHMTGTLEYLTDYEVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNMLHVV 2218
WY DSGCSRHMTG + + ++GG VT+G +AKGKIV G + + ++ V
Sbjct: 699 WYMDSGCSRHMTGKTTFFIKLDEYDGGLVTFGDDAKGKIVAVGKVGKNFSSCINDVPLVH 758
Query: 2217 GLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL------ 2056
GL NL+S+SQLCD V F K C V E +L + +N Y + L
Sbjct: 759 GLKHNLLSVSQLCDLGFEVIFKKFVCLVVCEKTGNVLLEAKRCNNVYGLTLEDLKEQNVT 818
Query: 2055 CHRAHTNDTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKRVSH 1876
C + ++ LWH+KLGH S ++ +LVK V G+P + C++CQ KQ + S
Sbjct: 819 CFTSLESEKWLWHRKLGHASMYQISKLVKKNLVRGIPNIKFDKDLTCDACQLVKQVKSSF 878
Query: 1875 QMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETFDFF 1696
+ T R LE++H+DL GP +S+GG+ Y V++DD+ R+ W FL K++ F F
Sbjct: 879 KSKDGISTKRPLEMLHIDLFGPTRTQSLGGKNYGLVVLDDYPRFGWVLFLAHKNDAFHAF 938
Query: 1695 RSWHKKVCNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAERKN 1516
+ KK+ N +L +A +RSDHG+EFEN F FCD GISH FS P+TPQQNGV ER+N
Sbjct: 939 STLCKKIQNEKDLKIAHLRSDHGREFENQDFEKFCDDLGISHNFSCPRTPQQNGVVERRN 998
Query: 1515 RTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLKYFH 1336
R+LQE+TR ML ++ K WAEA+NTAC+I NR ++R G TPYEI G PNLKYF+
Sbjct: 999 RSLQEMTRAMLCESEIPKFLWAEAVNTACYIFNRTFIRKGLKKTPYEIWKGTPPNLKYFY 1058
Query: 1335 VFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDDLSD 1156
VFGC C+VLN+++NLG FD KS + +F+GY++ S AYRVY +TI ES+++ F D +
Sbjct: 1059 VFGCKCFVLNNKENLGNFDPKSYEGMFVGYSTTSKAYRVYLKEHRTIEESIHVTFCDSNL 1118
Query: 1155 IAGKSEEDHVDLLEFVETAPAKDVGTDVMENVTEAPSTADSNAEPNVTASEPTXXXXXXX 976
I +++ D ++VGT+ E P + N + P
Sbjct: 1119 IPSIVKDNDSD---------CEEVGTN-----QENPKSVQ-----NEESVSPVLSHQFGG 1159
Query: 975 XXXXXDFEPIEETN--NPIVDRGSDIPTR------IQRNHPTSQIIGNTTDGIKTRGKGR 820
E T P+ S P R R +P IIG+ + G+ TR +
Sbjct: 1160 DISILSPEQARATEIVRPLEVHQSSTPVRKPREWKSMRGYPHDFIIGDPSHGVTTRSSTK 1219
Query: 819 VNYRDMVRMVCLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDVWF 640
T+ +N+ +S E NV +AL+D W+ +MQEEL QF KN VW
Sbjct: 1220 -----------RQTEPSNL---ALLSQMESNNVKQALEDPSWVKAMQEELAQFDKNKVWT 1265
Query: 639 LVPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIESI 460
LVP P+ V GTKW+FKNK E G++VRNKARLVAQGY Q EG+DFDE+FAPVAR E+I
Sbjct: 1266 LVPYPDGKKVTGTKWVFKNKLGEDGQVVRNKARLVAQGYDQEEGIDFDESFAPVARREAI 1325
Query: 459 RLLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYGLK 280
RLLLA A Y G + QMDVK AFLN F+D E +V QP GFE PNHV+KL KALYGL+
Sbjct: 1326 RLLLAYAAYKGFKMFQMDVKCAFLNGFIDREVYVAQPPGFEHIEFPNHVFKLTKALYGLR 1385
Query: 279 QAPRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLKEF 100
QAPRAWY RL+ +LL+ F+RG D TLFI+ + DI++ Q+YVDDIVFGS++ L +EF
Sbjct: 1386 QAPRAWYERLSAFLLENQFQRGTTDTTLFIKASHDDILLVQVYVDDIVFGSANISLCEEF 1445
Query: 99 IACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
M+S FEMS++GEL++FLGLQIKQ G FI
Sbjct: 1446 GKLMTSEFEMSLMGELTFFLGLQIKQTPSGTFI 1478
>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108712101|gb|ABF99896.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1969
Score = 661 bits (1705), Expect = 0.0
Identities = 371/830 (44%), Positives = 498/830 (60%), Gaps = 17/830 (2%)
Frame = -3
Query: 2439 HVIYTSLRSNVAGSWYFDSGCSRHMTGTLEYLTDYEVFNGGN-VTYGGEAKGKIVGKGTL 2263
H+ + RSN SW DSGCSRHMTG ++ T +G +T+G + G+++ KGT+
Sbjct: 743 HLDFGVGRSN---SWLVDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVMAKGTI 799
Query: 2262 NVEGLPKLRNMLHVVGLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDN 2083
V L+++ V L NL+S+SQLCD++L V+F K+ V D +++ + R
Sbjct: 800 KVNDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPVFDISRVGRV 859
Query: 2082 CYQFCNDQL-----CHRAHTN-DTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVS 1921
+ + C A N D WH++LGH+ L + + + GLPKL V+
Sbjct: 860 FFANFDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVQKDL 919
Query: 1920 VCESCQRGKQKRVSHQMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYT 1741
VC C+ GK SH+ + T +L+HMD +GP ++SVGG+ Y V+VDDFSRY+
Sbjct: 920 VCAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYS 979
Query: 1740 WTYFLREKSETFDFFRSWHKKVCNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFS 1561
W YFL K ETF FF+S + + + + IRSD+G EF+NS+F +FCD G+ H+FS
Sbjct: 980 WVYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFS 1039
Query: 1560 APKTPQQNGVAERKNRTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTP 1381
+P PQQNGV ERKNRTL E+ R ML ++FW EA++ AC I+NRV+LR TP
Sbjct: 1040 SPYVPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTP 1099
Query: 1380 YEILMGKKPNLKYFHVFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTK 1201
YE+ G++P + + VFGC C+VL NL KF+S+S +FLGY ++S AYRVY L T
Sbjct: 1100 YELRFGRRPKVSHLRVFGCKCFVLKS-GNLDKFESRSLDGIFLGYATHSRAYRVYVLSTN 1158
Query: 1200 TIMESVNIVFDDLS-----DIAGKSEE-----DHVDLLEFVETAPAKDVGTDVMENVTEA 1051
I+E+ + FD+ S +I+G +E + D + P D V E T +
Sbjct: 1159 KIVETCEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQE--TGS 1216
Query: 1050 PSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEETNNPIVDRGSDIPTRIQRNHPTS 871
PST + + T+S E I+ + G P IQ HP
Sbjct: 1217 PSTTSPSGDAPTTSSSAA--------------EEIDGGTS-----GPTAPRHIQNRHPPD 1257
Query: 870 QIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWI 691
+IG + + TR + S + N FV++FEPKNV AL DE W+
Sbjct: 1258 SMIGGLGERV-TRNR--------------SYELVN---SAFVASFEPKNVCHALSDENWV 1299
Query: 690 HSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVE 511
++M EEL+ F +N VW LV P NVIGTKW+FKNK E G IVRNKARLVAQG+TQVE
Sbjct: 1300 NAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVE 1359
Query: 510 GVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDP 331
G+DF+ETFAPVAR+E+IR+LLA A G L QMDVKSAFLN ++EE +V+QP GFE+P
Sbjct: 1360 GLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENP 1419
Query: 330 FKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIY 151
PNHV+KL+KALYGLKQAPRAWY RL +LLQ GF+ G VDKTLF D ++ QIY
Sbjct: 1420 KFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIY 1479
Query: 150 VDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
VDDI+FG SS L+ +F MS FEMSM+GEL++FLGLQIKQ KEGIF+
Sbjct: 1480 VDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFV 1529
>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1948
Score = 658 bits (1698), Expect = 0.0
Identities = 366/819 (44%), Positives = 491/819 (59%), Gaps = 17/819 (2%)
Frame = -3
Query: 2406 AGSWYFDSGCSRHMTGTLEYLTDY-EVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNM 2230
+ SW DSGCSRHMTG ++ T + +T+G + G+++ KGT+ V L+++
Sbjct: 730 SNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKDV 789
Query: 2229 LHVVGLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL-- 2056
V L NL+S+SQLCD++L V+F K+ V D +++ + R + +
Sbjct: 790 ALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPVFDISRVGRVFFANFDSSAPG 849
Query: 2055 ---CHRAHTN-DTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQK 1888
C A N D WH++LGH+ L + + + GLPKL V VC C+ GK
Sbjct: 850 PSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGKMT 909
Query: 1887 RVSHQMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSET 1708
SH+ + T +L+HMD +GP ++SVGG+ Y V+VDDFSRY+W YFL K ET
Sbjct: 910 SSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKEET 969
Query: 1707 FDFFRSWHKKVCNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVA 1528
F FF+S + + + + IRSD+G EF+NS+F +FCD G+ H+FS+P PQQNGV
Sbjct: 970 FGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNGVV 1029
Query: 1527 ERKNRTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNL 1348
ERKNRTL E+ R ML ++FW EA++ AC I+NRV+LR TPYE+ G++P +
Sbjct: 1030 ERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRPKV 1089
Query: 1347 KYFHVFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFD 1168
+ VFGC C+VL NL KF+S+S +FLGY ++S AYRVY L T I+E+ + FD
Sbjct: 1090 SHLRVFGCKCFVLKS-GNLDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFD 1148
Query: 1167 DLS-----DIAGKSEE-----DHVDLLEFVETAPAKDVGTDVMENVTEAPSTADSNAEPN 1018
+ S +I+G +E + D + P D V E T +PST + +
Sbjct: 1149 EASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQE--TGSPSTTSPSGDAP 1206
Query: 1017 VTASEPTXXXXXXXXXXXXDFEPIEETNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIK 838
T+S E I+ + G P IQ HP +IG + +
Sbjct: 1207 TTSSSAA--------------EEIDGGTS-----GPTAPRHIQNRHPPDSMIGGLGERV- 1246
Query: 837 TRGKGRVNYRDMVRMVCLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFV 658
TR + S + N FV++FEPKNV AL DE W+++M EEL+ F
Sbjct: 1247 TRNR--------------SYELVN---SAFVASFEPKNVCHALSDENWVNAMHEELENFE 1289
Query: 657 KNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPV 478
+N VW LV P NVIGTKW+FKNK E G IVRNKARLVAQG+TQVEG+DF+ETFAPV
Sbjct: 1290 RNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPV 1349
Query: 477 ARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKK 298
AR+E+IR+LLA A G L QMDVKSAFLN ++EE +V+QP GFE+P PNHV+KL+K
Sbjct: 1350 ARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEK 1409
Query: 297 ALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSD 118
ALYGLKQAPRAWY RL +LLQ GF+ G VDKTLF D ++ QIYVDDI+FG SS
Sbjct: 1410 ALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSH 1469
Query: 117 KLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
L+ +F MS FEMSM+GEL++FLGLQIKQ KEGIF+
Sbjct: 1470 ALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFV 1508
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
Group]
Length = 2145
Score = 659 bits (1699), Expect = 0.0
Identities = 370/830 (44%), Positives = 496/830 (59%), Gaps = 17/830 (2%)
Frame = -3
Query: 2439 HVIYTSLRSNVAGSWYFDSGCSRHMTGTLEYLTDY-EVFNGGNVTYGGEAKGKIVGKGTL 2263
H+ + RSN SW DSGCSRHMTG ++ T + +T+G + G+++ KGT+
Sbjct: 743 HLDFGVGRSN---SWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTI 799
Query: 2262 NVEGLPKLRNMLHVVGLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDN 2083
V L+++ V L NL+S+SQLCD++L V+F K+ V D +++ + R
Sbjct: 800 KVNDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPVFDISRVGRV 859
Query: 2082 CYQFCNDQL-----CHRAHTN-DTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVS 1921
+ + C A N D WH++LGH+ L + + + GLPKL V
Sbjct: 860 FFANFDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDL 919
Query: 1920 VCESCQRGKQKRVSHQMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYT 1741
VC C+ GK SH+ + T +L+HMD +GP ++SVGG+ Y V+VDDFSRY+
Sbjct: 920 VCAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYS 979
Query: 1740 WTYFLREKSETFDFFRSWHKKVCNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFS 1561
W YFL K ETF FF+S + + + + IRSD+G EF+NS+F +FCD G+ H+FS
Sbjct: 980 WVYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFS 1039
Query: 1560 APKTPQQNGVAERKNRTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTP 1381
+P PQQNGV ERKNRTL E+ R ML ++FW EA++ AC I+NRV+LR TP
Sbjct: 1040 SPYVPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTP 1099
Query: 1380 YEILMGKKPNLKYFHVFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTK 1201
YE+ G++P + + VFGC C+VL NL KF+S+S +FLGY ++S AYRVY L T
Sbjct: 1100 YELRFGRRPKVSHLRVFGCKCFVLKS-GNLDKFESRSLDGIFLGYATHSRAYRVYVLSTN 1158
Query: 1200 TIMESVNIVFDDLS-----DIAGKSEE-----DHVDLLEFVETAPAKDVGTDVMENVTEA 1051
I+E+ + FD+ S +I+G +E + D + P D V E T +
Sbjct: 1159 KIVETCEVTFDEASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQE--TGS 1216
Query: 1050 PSTADSNAEPNVTASEPTXXXXXXXXXXXXDFEPIEETNNPIVDRGSDIPTRIQRNHPTS 871
PST + + T+S E I+ + G P IQ HP
Sbjct: 1217 PSTTSPSGDAPTTSSSAA--------------EEIDGGTS-----GPTAPRHIQNRHPPD 1257
Query: 870 QIIGNTTDGIKTRGKGRVNYRDMVRMVCLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWI 691
+IG + + TR + S + N FV++FEPKNV AL DE W+
Sbjct: 1258 SMIGGLGERV-TRNR--------------SYELVN---SAFVASFEPKNVCHALSDENWV 1299
Query: 690 HSMQEELDQFVKNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVE 511
++M EEL+ F +N VW LV P NVIGTKW+FKNK E G IVRNKARLVAQG+TQVE
Sbjct: 1300 NAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVE 1359
Query: 510 GVDFDETFAPVARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDP 331
G+DF+ETFAPVAR+E+IR+LLA A G L QMDVKSAFLN ++EE +V+QP GFE+P
Sbjct: 1360 GLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENP 1419
Query: 330 FKPNHVYKLKKALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIY 151
PNHV+KL+KALYGLKQAPRAWY RL +LLQ GF+ G VDKTLF D ++ QIY
Sbjct: 1420 KFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIY 1479
Query: 150 VDDIVFGSSSDKLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
VDDI+FG SS L+ +F MS FEMSM+GEL++FLGLQIKQ KEGIF+
Sbjct: 1480 VDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFV 1529
>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2124
Score = 658 bits (1698), Expect = 0.0
Identities = 366/819 (44%), Positives = 491/819 (59%), Gaps = 17/819 (2%)
Frame = -3
Query: 2406 AGSWYFDSGCSRHMTGTLEYLTDY-EVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNM 2230
+ SW DSGCSRHMTG ++ T + +T+G + G+++ KGT+ V L+++
Sbjct: 730 SNSWLVDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKDV 789
Query: 2229 LHVVGLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCYQFCNDQL-- 2056
V L NL+S+SQLCD++L V+F K+ V D +++ + R + +
Sbjct: 790 ALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPVFDISRVGRVFFANFDSSAPG 849
Query: 2055 ---CHRAHTN-DTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQK 1888
C A N D WH++LGH+ L + + + GLPKL V VC C+ GK
Sbjct: 850 PSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGKMT 909
Query: 1887 RVSHQMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSET 1708
SH+ + T +L+HMD +GP ++SVGG+ Y V+VDDFSRY+W YFL K ET
Sbjct: 910 SSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKEET 969
Query: 1707 FDFFRSWHKKVCNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVA 1528
F FF+S + + + + IRSD+G EF+NS+F +FCD G+ H+FS+P PQQNGV
Sbjct: 970 FGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSSPYVPQQNGVV 1029
Query: 1527 ERKNRTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNL 1348
ERKNRTL E+ R ML ++FW EA++ AC I+NRV+LR TPYE+ G++P +
Sbjct: 1030 ERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPYELRFGRRPKV 1089
Query: 1347 KYFHVFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFD 1168
+ VFGC C+VL NL KF+S+S +FLGY ++S AYRVY L T I+E+ + FD
Sbjct: 1090 SHLRVFGCKCFVLKS-GNLDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFD 1148
Query: 1167 DLS-----DIAGKSEE-----DHVDLLEFVETAPAKDVGTDVMENVTEAPSTADSNAEPN 1018
+ S +I+G +E + D + P D V E T +PST + +
Sbjct: 1149 EASPGARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQE--TGSPSTTSPSGDAP 1206
Query: 1017 VTASEPTXXXXXXXXXXXXDFEPIEETNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIK 838
T+S E I+ + G P IQ HP +IG + +
Sbjct: 1207 TTSSSAA--------------EEIDGGTS-----GPTAPRHIQNRHPPDSMIGGLGERV- 1246
Query: 837 TRGKGRVNYRDMVRMVCLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFV 658
TR + S + N FV++FEPKNV AL DE W+++M EEL+ F
Sbjct: 1247 TRNR--------------SYELVN---SAFVASFEPKNVCHALSDENWVNAMHEELENFE 1289
Query: 657 KNDVWFLVPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPV 478
+N VW LV P NVIGTKW+FKNK E G IVRNKARLVAQG+TQVEG+DF+ETFAPV
Sbjct: 1290 RNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPV 1349
Query: 477 ARIESIRLLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKK 298
AR+E+IR+LLA A G L QMDVKSAFLN ++EE +V+QP GFE+P PNHV+KL+K
Sbjct: 1350 ARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEK 1409
Query: 297 ALYGLKQAPRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSD 118
ALYGLKQAPRAWY RL +LLQ GF+ G VDKTLF D ++ QIYVDDI+FG SS
Sbjct: 1410 ALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSH 1469
Query: 117 KLLKEFIACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
L+ +F MS FEMSM+GEL++FLGLQIKQ KEGIF+
Sbjct: 1470 ALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFV 1508
>gb|ABF67946.1| putative Opie4 pol protein [Zea mays]
Length = 1068
Score = 630 bits (1626), Expect = 0.0
Identities = 360/815 (44%), Positives = 482/815 (59%), Gaps = 15/815 (1%)
Frame = -3
Query: 2400 SWYFDSGCSRHMTGTLEYLTDY--EVFNGGNVTYGGEAKGKIVGKGTLNVEGLPKLRNML 2227
SW DSGC+ HMTG + T Y + ++ +G +GK+ G G + + + N+
Sbjct: 10 SWIIDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISNEHSISNVF 69
Query: 2226 HVVGLNANLISISQLCDDDLYVKFNKNSCEVFDENDTCILTGLRSSDNCY--QFCNDQL- 2056
V L NL+S+SQLC+ F VF +D + D Y F ++
Sbjct: 70 LVESLGYNLLSVSQLCNMGYNCLFTNVDVSVFRRSDGSLAFKGVLDDKLYLVDFAKEEAG 129
Query: 2055 ---CHRAHTNDTDLWHQKLGHVSHKKLMELVKYEAVIGLPKLSVKSVSVCESCQRGKQKR 1885
C A T+ LWH++L HV K L +L+K E VIGL + + C +CQ GKQ
Sbjct: 130 LDACLIAKTSMGWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFEKDRPCAACQAGKQVG 189
Query: 1884 VSHQMTSHFHTTRCLELVHMDLMGPIEIESVGGRKYSYVIVDDFSRYTWTYFLREKSETF 1705
+H + T+R LEL+HMDL GP+ S+GG KY VIVDDFSR+TW +FL++KSET
Sbjct: 190 GAHHSKNVMTTSRPLELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQ 249
Query: 1704 DFFRSWHKKVCNLYNLTVARIRSDHGKEFENSSFLTFCDRKGISHEFSAPKTPQQNGVAE 1525
+ + ++ N + L V +IRSD+G EF+N F + +GI HEFSAP TPQQNGV E
Sbjct: 250 GTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVE 309
Query: 1524 RKNRTLQEITRVMLSSKKLSKRFWAEALNTACHIANRVYLRPGCSMTPYEILMGKKPNLK 1345
RKNRTL ++ R ML K +RFW+EA+NTACH NRVYL T YE+L G KPN+
Sbjct: 310 RKNRTLIDMARTMLGEFKTPERFWSEAVNTACHAINRVYLHRLLKKTSYELLTGNKPNVS 369
Query: 1344 YFHVFGCVCYVLNDRDNLGKFDSKSDKCLFLGYTSNSHAYRVYNLRTKTIMESVNIVFDD 1165
YF VFG CY+L + KF K+ + LGY SN+ AYRV+N + + S ++VFD+
Sbjct: 370 YFRVFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDE 429
Query: 1164 LSDIAGKSEEDHVDL----LEFVETAPAKDVGT-DV--MENVTEAPSTADSNAEPNVTAS 1006
+ G E VDL E V TA + + DV E + + ++ + +P
Sbjct: 430 TN---GSPREQVVDLDDVDEEDVPTAAMRTMAIGDVRPQEQLEQDQPSSSTMVQPPTQDD 486
Query: 1005 EPTXXXXXXXXXXXXDFEPIEETNNPIVDRGSDIPTRIQRNHPTSQIIGNTTDGIKTRGK 826
E D +EE P + + IQR+HP QI+G+ + G+ TR +
Sbjct: 487 EQVHQQEACDQGGAQDDHVMEEDAQPAPP--TQVRAMIQRDHPVDQILGDISKGVTTRSR 544
Query: 825 GRVNYRDMVRMVCLSTDCTNVRTCCFVSNFEPKNVVEALKDEFWIHSMQEELDQFVKNDV 646
VN+ C + FVS+ EP V EAL D W+ +MQEEL+ F +N+V
Sbjct: 545 -LVNF------------CEHY---SFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEV 588
Query: 645 WFLVPRPEDVNVIGTKWIFKNKTDESGKIVRNKARLVAQGYTQVEGVDFDETFAPVARIE 466
W LVPRP+ NV+GTKW+F+NK DE G + RNKARLVA+GY QV G+DF+ETFAPVAR+E
Sbjct: 589 WTLVPRPKQ-NVVGTKWVFRNKQDEHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLE 647
Query: 465 SIRLLLAIACYLGLTLHQMDVKSAFLNEFLDEEAFVEQPKGFEDPFKPNHVYKLKKALYG 286
SI +LLA A + L+QMDVKSAFLN + EE +VEQP GFED P+HV KL KALYG
Sbjct: 648 SIHILLAYAAHHSFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYG 707
Query: 285 LKQAPRAWYGRLTEYLLQIGFKRGEVDKTLFIQRKNHDIMIAQIYVDDIVFGSSSDKLLK 106
LKQAPRAWY L + L+ FK G+ D TLF + + D+ + QIYVDDI+FGS++ K +
Sbjct: 708 LKQAPRAWYECLRDILIVNAFKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQKSCE 767
Query: 105 EFIACMSSTFEMSMVGELSYFLGLQIKQLKEGIFI 1
EF M+ FEMSM+GEL+YFLG Q+KQLK+G FI
Sbjct: 768 EFSRVMTQKFEMSMMGELNYFLGFQVKQLKDGTFI 802