BLASTX nr result
ID: Rehmannia28_contig00028269
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00028269
(328 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011090491.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 113 4e-27
ref|XP_008449720.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 112 4e-27
ref|XP_010102337.1| tRNA-specific 2-thiouridylase mnmA [Morus no... 112 1e-26
gb|KDO61266.1| hypothetical protein CISIN_1g042717mg, partial [C... 110 1e-26
ref|XP_006470603.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 110 2e-26
ref|XP_015389250.1| PREDICTED: uncharacterized protein LOC107174... 104 6e-26
ref|XP_007209892.1| hypothetical protein PRUPE_ppa004048mg [Prun... 109 8e-26
ref|XP_008238179.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 108 2e-25
ref|XP_004142116.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 107 3e-25
ref|XP_002282827.2| PREDICTED: mitochondrial tRNA-specific 2-thi... 107 3e-25
gb|KDO44892.1| hypothetical protein CISIN_1g0484031mg, partial [... 102 8e-25
ref|XP_010257320.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 103 7e-24
ref|XP_015875896.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 103 9e-24
ref|XP_015875895.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 103 9e-24
ref|XP_015875893.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 103 9e-24
ref|XP_006420996.1| hypothetical protein CICLE_v10006706mg, part... 102 2e-23
ref|XP_007015042.1| Transferases,tRNA-methyltransferases [Theobr... 100 3e-22
ref|XP_010673635.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 97 6e-22
ref|XP_010673633.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 97 1e-21
gb|KNA16767.1| hypothetical protein SOVF_086320 [Spinacia oleracea] 97 2e-21
>ref|XP_011090491.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Sesamum
indicum]
Length = 604
Score = 113 bits (282), Expect = 4e-27
Identities = 56/76 (73%), Positives = 67/76 (88%), Gaps = 2/76 (2%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESR--KA 154
FAAFY ESTCIGSGVILESWDDQGFP+CA+ALEIA+MEDKSKLGKPVKIKVIA+SR ++
Sbjct: 438 FAAFYQESTCIGSGVILESWDDQGFPVCARALEIARMEDKSKLGKPVKIKVIAQSRDEES 497
Query: 153 EESVRKEYNLTSGDRE 106
+++ + NLTS + E
Sbjct: 498 DQNESLKLNLTSVNSE 513
>ref|XP_008449720.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Cucumis
melo]
Length = 539
Score = 112 bits (281), Expect = 4e-27
Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY +CIGSGVILESWDDQGFP+C KA+E A+MEDKSKLGKP+KIKV +S E
Sbjct: 429 FAAFYKGRSCIGSGVILESWDDQGFPVCQKAIENAQMEDKSKLGKPIKIKVKPDSGMNES 488
Query: 147 SVRKEYNLTSGDR-ETATPNEKM--VSQNVARSNYPLKWLKQLVDKLTQVF 4
+ + + R E AT E+M VS + A + P+KWL L KL Q+F
Sbjct: 489 KAKDDTKIQDKSRNEEATVVEQMRKVSPDEAMATTPMKWLGSLRKKLLQIF 539
>ref|XP_010102337.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]
gi|587905107|gb|EXB93298.1| tRNA-specific
2-thiouridylase mnmA [Morus notabilis]
Length = 580
Score = 112 bits (279), Expect = 1e-26
Identities = 57/108 (52%), Positives = 72/108 (66%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY +C+GSG+ILESWDDQGFP+C KALEIAKMEDKS LGKPVKIKV ES E
Sbjct: 476 FAAFYQGKSCLGSGIILESWDDQGFPVCEKALEIAKMEDKSLLGKPVKIKVKPESPTIEP 535
Query: 147 SVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQVF 4
+ L G R + K Q + ++P+KWL++L +K ++F
Sbjct: 536 GQKSSTELDRGQRSSHIAAAKQGRQAL---SFPMKWLQRLREKWFRIF 580
>gb|KDO61266.1| hypothetical protein CISIN_1g042717mg, partial [Citrus sinensis]
Length = 474
Score = 110 bits (276), Expect = 1e-26
Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRK--- 157
FAAFY + CIGSGVILESWDDQGFP+C KALEIA+MEDKSKLGKP+KIKV E+ +
Sbjct: 365 FAAFYQGTRCIGSGVILESWDDQGFPVCEKALEIARMEDKSKLGKPIKIKVKPETPEEFN 424
Query: 156 AEESVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQV 7
+ + V+ NL + A SQ A S +P+ WL++L +K ++
Sbjct: 425 SNKGVQSSRNLVNAQNSIA-EKSNTTSQEEAISRFPMNWLQKLREKWPRI 473
>ref|XP_006470603.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA [Citrus sinensis]
Length = 525
Score = 110 bits (276), Expect = 2e-26
Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRK--- 157
FAAFY + CIGSGVILESWDDQGFP+C KALEIA+MEDKSKLGKP+KIKV E+ +
Sbjct: 416 FAAFYQGTRCIGSGVILESWDDQGFPVCEKALEIARMEDKSKLGKPIKIKVKPETPEEFN 475
Query: 156 AEESVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQV 7
+ + V+ NL + A SQ A S +P+ WL++L +K ++
Sbjct: 476 SNKGVQSSRNLVNAQNSIA-EKSNTTSQEEAISRFPMNWLQKLREKWPRI 524
>ref|XP_015389250.1| PREDICTED: uncharacterized protein LOC107174296 [Citrus sinensis]
Length = 199
Score = 104 bits (259), Expect = 6e-26
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAE------ 166
FAAFY C+GSGVILE+WDDQGFP+C KALEIA+MEDKSKLGKPVKIKV E
Sbjct: 73 FAAFYQGRRCLGSGVILEAWDDQGFPVCKKALEIARMEDKSKLGKPVKIKVKPETPMEFD 132
Query: 165 SRKAEESVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLT 13
+ K ES R +N +G E ++ + + R +P W+ +L +K T
Sbjct: 133 NNKGIESSRNLFNGQNGVVENRNTTSQVQEEAIPR--FPWNWMHKLSEKWT 181
>ref|XP_007209892.1| hypothetical protein PRUPE_ppa004048mg [Prunus persica]
gi|462405627|gb|EMJ11091.1| hypothetical protein
PRUPE_ppa004048mg [Prunus persica]
Length = 533
Score = 109 bits (272), Expect = 8e-26
Identities = 57/111 (51%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY TC+GSGVILESWDDQGFP+CA+ALEIA+MEDKS LGKPVKIKV E+ E
Sbjct: 423 FAAFYQGRTCLGSGVILESWDDQGFPVCARALEIARMEDKSLLGKPVKIKVKPENPITES 482
Query: 147 SVRKEYNLTSGDRE---TATPNEKMVSQNVARSNYPLKWLKQLVDKLTQVF 4
L G + +A VSQ A + +P+ WL++ +K ++F
Sbjct: 483 DQVDGMELCRGLKHSGISAAKQRMQVSQGEAITRFPVNWLQKFREKWLRIF 533
>ref|XP_008238179.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Prunus mume]
Length = 537
Score = 108 bits (269), Expect = 2e-25
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY TC+GSGVILESWDDQGFP+CA+ALEIA+MEDKS LG+PVKIKV E+ E
Sbjct: 427 FAAFYQGRTCLGSGVILESWDDQGFPVCARALEIARMEDKSLLGRPVKIKVKPENPITES 486
Query: 147 SVRKEYNLTSGDRE---TATPNEKMVSQNVARSNYPLKWLKQLVDKLTQVF 4
L G + +A VSQ A + +P+ WL++ +K +F
Sbjct: 487 DQVDGMELCGGLKHSGISAAKQRMQVSQGEAITRFPVNWLQKFREKWLHIF 537
>ref|XP_004142116.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Cucumis
sativus] gi|700199017|gb|KGN54175.1| hypothetical
protein Csa_4G291390 [Cucumis sativus]
Length = 538
Score = 107 bits (268), Expect = 3e-25
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY +CIGSGVILESWDDQGFP+C KA+E A+MEDKSKLGKP+KIKV ES E
Sbjct: 428 FAAFYKGRSCIGSGVILESWDDQGFPVCQKAIENAQMEDKSKLGKPIKIKVKPESGMKES 487
Query: 147 SVRKE---YNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQVF 4
+ + ++ + T + VS + A + +KWL L KL Q+F
Sbjct: 488 KAKDDTEIHDKLRNEEATVVEQIREVSPDEAMATPSMKWLGSLKKKLLQIF 538
>ref|XP_002282827.2| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Vitis
vinifera] gi|297746327|emb|CBI16383.3| unnamed protein
product [Vitis vinifera]
Length = 544
Score = 107 bits (268), Expect = 3e-25
Identities = 57/110 (51%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAES-RKAE 151
F AFY +CIGSGVILESWDDQGFP+CAKALEIA+MEDKSKLGKPVKIKV E+ K
Sbjct: 434 FTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPETPPKGS 493
Query: 150 ESVR--KEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQV 7
+ + K + + T S+ ARS +P+ WL+++ +K Q+
Sbjct: 494 DQIDGIKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIREKWLQM 543
>gb|KDO44892.1| hypothetical protein CISIN_1g0484031mg, partial [Citrus sinensis]
Length = 235
Score = 102 bits (254), Expect = 8e-25
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIA------E 166
FAAFY C+GSGVILE+WDDQGFP+C KALEIA+MEDKSKLGKPVKIKV +
Sbjct: 123 FAAFYQGRRCLGSGVILEAWDDQGFPVCKKALEIARMEDKSKLGKPVKIKVKLQTPMEFD 182
Query: 165 SRKAEESVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLT 13
+ K ES R +N +G E ++ + + R +P W+ +L +K T
Sbjct: 183 NNKGIESSRNLFNGQNGVVENRNTTSQVQEEAIPR--FPGNWMHKLSEKWT 231
>ref|XP_010257320.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Nelumbo nucifera]
Length = 531
Score = 103 bits (258), Expect = 7e-24
Identities = 57/110 (51%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAES--RKA 154
FAAFY TCIGSGVILE WD QGFP+CAKAL+IA+MEDKSKLGKPVKIKV E+ + +
Sbjct: 425 FAAFYQGKTCIGSGVILECWDSQGFPVCAKALQIARMEDKSKLGKPVKIKVNPENSLKSS 484
Query: 153 EESVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQVF 4
E + + E N S + E T ++ S+ ++ + + W ++L +K QVF
Sbjct: 485 EITDKVELNGKSLNSEDITLDK---SKQSSQGIFNVNWFQKLREKWLQVF 531
>ref|XP_015875896.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA isoform X3 [Ziziphus
jujuba]
Length = 519
Score = 103 bits (257), Expect = 9e-24
Identities = 57/108 (52%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY TC+GSG+ILESWDDQGFP+CAKALEIA+MEDKS LGKPVKIKV E E
Sbjct: 407 FAAFYQGKTCLGSGIILESWDDQGFPVCAKALEIARMEDKSLLGKPVKIKVKPEKTHFME 466
Query: 147 SVRK---EYNLTSGDR--ETATPNEKMVSQNVARSNYPLKWLKQLVDK 19
+ +K E N R A SQ S +P+K L++ +K
Sbjct: 467 ANQKGVIELNRGQSSRSASAAIKQRSQASQGEVISRFPMKLLQKFRNK 514
>ref|XP_015875895.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA isoform X2 [Ziziphus
jujuba]
Length = 527
Score = 103 bits (257), Expect = 9e-24
Identities = 57/108 (52%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY TC+GSG+ILESWDDQGFP+CAKALEIA+MEDKS LGKPVKIKV E E
Sbjct: 415 FAAFYQGKTCLGSGIILESWDDQGFPVCAKALEIARMEDKSLLGKPVKIKVKPEKTHFME 474
Query: 147 SVRK---EYNLTSGDR--ETATPNEKMVSQNVARSNYPLKWLKQLVDK 19
+ +K E N R A SQ S +P+K L++ +K
Sbjct: 475 ANQKGVIELNRGQSSRSASAAIKQRSQASQGEVISRFPMKLLQKFRNK 522
>ref|XP_015875893.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA isoform X1 [Ziziphus
jujuba]
Length = 537
Score = 103 bits (257), Expect = 9e-24
Identities = 57/108 (52%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY TC+GSG+ILESWDDQGFP+CAKALEIA+MEDKS LGKPVKIKV E E
Sbjct: 425 FAAFYQGKTCLGSGIILESWDDQGFPVCAKALEIARMEDKSLLGKPVKIKVKPEKTHFME 484
Query: 147 SVRK---EYNLTSGDR--ETATPNEKMVSQNVARSNYPLKWLKQLVDK 19
+ +K E N R A SQ S +P+K L++ +K
Sbjct: 485 ANQKGVIELNRGQSSRSASAAIKQRSQASQGEVISRFPMKLLQKFRNK 532
>ref|XP_006420996.1| hypothetical protein CICLE_v10006706mg, partial [Citrus clementina]
gi|557522869|gb|ESR34236.1| hypothetical protein
CICLE_v10006706mg, partial [Citrus clementina]
Length = 537
Score = 102 bits (254), Expect = 2e-23
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIA------E 166
FAAFY C+GSGVILE+WDDQGFP+C KALEIA+MEDKSKLGKPVKIKV +
Sbjct: 408 FAAFYQGRRCLGSGVILEAWDDQGFPVCKKALEIARMEDKSKLGKPVKIKVKLQTPMEFD 467
Query: 165 SRKAEESVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLT 13
+ K ES R +N +G E ++ + + R +P W+ +L +K T
Sbjct: 468 NNKGIESSRNLFNGQNGVVENRNTTSQVQEEAIPR--FPGNWMHKLSEKWT 516
>ref|XP_007015042.1| Transferases,tRNA-methyltransferases [Theobroma cacao]
gi|508785405|gb|EOY32661.1|
Transferases,tRNA-methyltransferases [Theobroma cacao]
Length = 1075
Score = 99.8 bits (247), Expect = 3e-22
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAE 166
FAAFY TCIGSGVILESWDDQGFP+CAKALEIA+MEDKSKLGKPVKIK AE
Sbjct: 1001 FAAFYEGQTCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKAKAE 1054
>ref|XP_010673635.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X3
[Beta vulgaris subsp. vulgaris]
Length = 378
Score = 97.4 bits (241), Expect = 6e-22
Identities = 55/108 (50%), Positives = 66/108 (61%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY CIGSGVILE WDD+GFP+C KALEIA+MEDKSKLGKPVKIKV E
Sbjct: 276 FAAFYQGKMCIGSGVILEFWDDEGFPVCEKALEIARMEDKSKLGKPVKIKVKPEG----P 331
Query: 147 SVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQVF 4
V N S +A+ + V S P W++Q+ K+ Q+F
Sbjct: 332 DVGTNENNGSIHPSSASSKRVDAEEEVTDSLSP-NWMQQVKQKILQLF 378
>ref|XP_010673633.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X1
[Beta vulgaris subsp. vulgaris]
gi|870863324|gb|KMT14488.1| hypothetical protein
BVRB_4g072600 [Beta vulgaris subsp. vulgaris]
Length = 534
Score = 97.4 bits (241), Expect = 1e-21
Identities = 55/108 (50%), Positives = 66/108 (61%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQGFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAEE 148
FAAFY CIGSGVILE WDD+GFP+C KALEIA+MEDKSKLGKPVKIKV E
Sbjct: 432 FAAFYQGKMCIGSGVILEFWDDEGFPVCEKALEIARMEDKSKLGKPVKIKVKPEG----P 487
Query: 147 SVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQVF 4
V N S +A+ + V S P W++Q+ K+ Q+F
Sbjct: 488 DVGTNENNGSIHPSSASSKRVDAEEEVTDSLSP-NWMQQVKQKILQLF 534
>gb|KNA16767.1| hypothetical protein SOVF_086320 [Spinacia oleracea]
Length = 526
Score = 97.1 bits (240), Expect = 2e-21
Identities = 52/109 (47%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Frame = -2
Query: 327 FAAFYHESTCIGSGVILESWDDQ-GFPICAKALEIAKMEDKSKLGKPVKIKVIAESRKAE 151
FAAFY TC+GSG+ILESWD++ GFP+C KALEIA+MEDKSKLGKPVKIKV E +
Sbjct: 423 FAAFYQGRTCVGSGIILESWDEEEGFPVCEKALEIARMEDKSKLGKPVKIKVKPEDPQVG 482
Query: 150 ESVRKEYNLTSGDRETATPNEKMVSQNVARSNYPLKWLKQLVDKLTQVF 4
+ + +S +E+ V+ V+ + W++QL K+ Q+F
Sbjct: 483 LNEKAGSTNSSKVTTRGVESEEKVTDGVSPN-----WMQQLKQKILQLF 526