BLASTX nr result
ID: Rehmannia28_contig00028239
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00028239
(317 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008383873.1| PREDICTED: putative ribonuclease H protein A... 83 1e-16
ref|XP_008344853.1| PREDICTED: putative ribonuclease H protein A... 82 2e-16
ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein A... 83 2e-16
ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438... 83 2e-16
ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein A... 82 3e-16
ref|XP_008370907.1| PREDICTED: putative ribonuclease H protein A... 82 3e-16
ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein A... 82 3e-16
ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433... 82 4e-16
ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418... 82 5e-16
ref|XP_008358855.1| PREDICTED: uncharacterized protein LOC103422... 82 5e-16
ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein A... 81 7e-16
ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein A... 81 9e-16
ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein A... 80 1e-15
ref|XP_008349386.1| PREDICTED: putative ribonuclease H protein A... 78 4e-15
ref|XP_008362180.1| PREDICTED: uncharacterized protein LOC103425... 79 4e-15
ref|XP_008381797.1| PREDICTED: uncharacterized protein LOC103444... 78 8e-15
ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein A... 78 1e-14
ref|XP_008346905.1| PREDICTED: uncharacterized protein LOC103409... 78 1e-14
gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 75 8e-14
ref|XP_008356537.1| PREDICTED: uncharacterized protein LOC103420... 73 5e-13
>ref|XP_008383873.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 389
Score = 82.8 bits (203), Expect = 1e-16
Identities = 39/101 (38%), Positives = 52/101 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 17 STSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGI 76
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVFSVQL 8
+CQLC ++SE +DH F C + W + F +
Sbjct: 77 PLAPICQLCHKNSESIDHLFSSCEFAQCAWRWLATQFGTTI 117
>ref|XP_008344853.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 346
Score = 82.0 bits (201), Expect = 2e-16
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = -2
Query: 301 GSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGISGP 122
G S Y +H RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 20 GVFSFSDGYEIVHHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGIPLT 79
Query: 121 AVCQLCFQHSEDLDHCFLDC 62
++CQLC+++SE +DH F C
Sbjct: 80 SICQLCYKNSESIDHLFSSC 99
>ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 715
Score = 82.8 bits (203), Expect = 2e-16
Identities = 39/97 (40%), Positives = 51/97 (52%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 343 STSGVFSFSDGYEIVRHRFPVKSWASXIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGI 402
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+CQLC ++SE +DH F C + W + F
Sbjct: 403 PLAPICQLCHKNSESIDHLFSXCEFAQCAWRWLATQF 439
>ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438319 [Malus domestica]
Length = 1384
Score = 82.8 bits (203), Expect = 2e-16
Identities = 39/97 (40%), Positives = 51/97 (52%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 1012 STSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTXDXLQRRGI 1071
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+CQLC ++SE +DH F C + W + F
Sbjct: 1072 PLAPICQLCHKNSESIDHLFSSCEFAQCAWRWLATQF 1108
>ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 591
Score = 82.4 bits (202), Expect = 3e-16
Identities = 38/101 (37%), Positives = 52/101 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 219 STSGVFSFSDGYEIVRHRFPVKSWASTIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGI 278
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVFSVQL 8
+CQLC ++SE ++H F C + W + F +
Sbjct: 279 PLAPICQLCHKNSESIBHLFSSCEFAQCAWRWLATQFGTXI 319
>ref|XP_008370907.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 899
Score = 82.4 bits (202), Expect = 3e-16
Identities = 39/97 (40%), Positives = 51/97 (52%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 527 STSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGI 586
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+CQLC ++SE +DH F C + W + F
Sbjct: 587 PLAPICQLCHKNSESIDHLFSSCXFAQCAWRWLATQF 623
>ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 591
Score = 82.0 bits (201), Expect = 3e-16
Identities = 39/97 (40%), Positives = 50/97 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW ++ NKLP LQRRGI
Sbjct: 219 STSGGFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWXILFNKLPTEDQLQRRGI 278
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+CQLC ++SE +DH F C + W + F
Sbjct: 279 PLAPICQLCHKNSESIDHLFSSCDFAQCAWRWLATQF 315
>ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433498 [Malus domestica]
Length = 1384
Score = 82.0 bits (201), Expect = 4e-16
Identities = 39/97 (40%), Positives = 50/97 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 1012 STSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTXDQLQRRGI 1071
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+CQLC ++SE DH F C + W + F
Sbjct: 1072 PLAPICQLCHKNSESXDHLFSSCXFAQCAWRWLATQF 1108
>ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418244 [Malus domestica]
Length = 1384
Score = 81.6 bits (200), Expect = 5e-16
Identities = 39/97 (40%), Positives = 50/97 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 1012 STSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTXDXLQRRGI 1071
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+CQLC ++SE +DH F C W + F
Sbjct: 1072 PLAPICQLCHKNSESIDHLFSSCEFAXCAWXWLATQF 1108
>ref|XP_008358855.1| PREDICTED: uncharacterized protein LOC103422573 [Malus domestica]
Length = 1419
Score = 81.6 bits (200), Expect = 5e-16
Identities = 38/101 (37%), Positives = 52/101 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 1012 SXSGXFSFSDGYEIVRHRFPVKSWASIIWXPFIPPRYSILVWKILFNKLPTEDQLQRRGI 1071
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVFSVQL 8
+CQLC ++SE ++H F C + W + F +
Sbjct: 1072 XLAPICQLCHKNSESIBHLFSSCXFAQCAWRWLATQFGTXI 1112
>ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 768
Score = 81.3 bits (199), Expect = 7e-16
Identities = 39/97 (40%), Positives = 50/97 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 396 STSGGFSFSDGYEIVRHRFPVKSWASIIWXPFIPXRYSILVWKILFNKLPTEDQLQRRGI 455
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
CQLC ++SE +DH F C + W + F
Sbjct: 456 XLAPXCQLCHKNSESIDHLFSSCDFAQCAWRWLATQF 492
>ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 805
Score = 80.9 bits (198), Expect = 9e-16
Identities = 39/97 (40%), Positives = 50/97 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 433 SSSGGFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGI 492
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
CQLC ++SE +DH F C + W + F
Sbjct: 493 PLAPXCQLCHKNSESIDHLFSSCDFAQCAWRWLATQF 529
>ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 1048
Score = 80.5 bits (197), Expect = 1e-15
Identities = 38/101 (37%), Positives = 51/101 (50%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + FPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 676 STSGVFSFSDGYEIVRHXFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGI 735
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVFSVQL 8
+CQLC ++SE +DH F C + W + F +
Sbjct: 736 PLAPICQLCHKNSESIDHLFSSCEFAQCAWRWLATQFGTXI 776
>ref|XP_008349386.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 327
Score = 78.2 bits (191), Expect = 4e-15
Identities = 37/97 (38%), Positives = 50/97 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + +RFPV W +W IP R S+LVW+++ NKL LQRRGI
Sbjct: 17 STSGVFSFSDGYEIVRRRFPVKSWASIIWRPFIPPRYSILVWKILSNKLQTEDQLQRRGI 76
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+CQLC ++ E +DH F C + W + F
Sbjct: 77 PLTPICQLCHKNFESIDHLFSSCEFAQCAWRWLATQF 113
>ref|XP_008362180.1| PREDICTED: uncharacterized protein LOC103425857 [Malus domestica]
Length = 1384
Score = 79.0 bits (193), Expect = 4e-15
Identities = 36/90 (40%), Positives = 47/90 (52%)
Frame = -2
Query: 277 YWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGISGPAVCQLCFQ 98
Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI +CQLC +
Sbjct: 1023 YEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGIPLAPICQLCHK 1082
Query: 97 HSEDLDHCFLDCPIVRSNWEYFTGVFSVQL 8
+SE DH F C W + F +
Sbjct: 1083 NSESXDHLFSSCEFAXCAWXWLATQFGTXI 1112
>ref|XP_008381797.1| PREDICTED: uncharacterized protein LOC103444619 [Malus domestica]
Length = 1183
Score = 78.2 bits (191), Expect = 8e-15
Identities = 37/101 (36%), Positives = 49/101 (48%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + FPV W W IP R S+ VW+++ NKLP LQRRGI
Sbjct: 879 STSGVFSFSDGYEIVRHXFPVKSWASIXWRPFIPPRYSIXVWKILFNKLPTXDQLQRRGI 938
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVFSVQL 8
+CQLC ++SE +DH F C + W + F +
Sbjct: 939 PLAPICQLCHKNSESIDHLFSSCXFAQCAWRWLATQFGTXI 979
>ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 577
Score = 77.8 bits (190), Expect = 1e-14
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV W +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 205 STSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPRYSILVWKILFNKLPTEDQLQRRGI 264
Query: 130 SGPAVCQLCFQHSEDLDHCFLDC 62
+CQLC ++SE +DH F C
Sbjct: 265 PLAPICQLCHKNSESIDHLFSSC 287
>ref|XP_008346905.1| PREDICTED: uncharacterized protein LOC103409892 [Malus domestica]
Length = 1251
Score = 77.8 bits (190), Expect = 1e-14
Identities = 38/97 (39%), Positives = 50/97 (51%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + RFPV +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 879 STSGXFSFSDGYEIVRHRFPVKSXASIIWRPFIPPRYSILVWKILFNKLPTEDXLQRRGI 938
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+CQLC ++SE +DH F C + W + F
Sbjct: 939 PLAPICQLCHKNSESIDHLFSSCXFAQCAWRWLATQF 975
>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
Length = 409
Score = 75.1 bits (183), Expect = 8e-14
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
SV G +S+++A+ L P V W K LW++ P + + WR +HNKLP +L++RG
Sbjct: 48 SVDGDLSNKLAFSFLPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGC 107
Query: 130 SGPAV-CQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVFSVQLDF 2
++ C C + +E H FL CP+ W++ LDF
Sbjct: 108 YIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATDQHLDF 151
>ref|XP_008356537.1| PREDICTED: uncharacterized protein LOC103420255 [Malus domestica]
Length = 1251
Score = 73.2 bits (178), Expect = 5e-13
Identities = 36/97 (37%), Positives = 48/97 (49%)
Frame = -2
Query: 310 SVHGSVSSRIAYWHLHKRFPVVRWGKWLWHSGIPTRRSMLVWRLIHNKLPLWGHLQRRGI 131
S G S Y + FPV +W IP R S+LVW+++ NKLP LQRRGI
Sbjct: 879 STSGXFSFSDGYEIVRHXFPVKSXASIIWRPFIPPRYSILVWKILFNKLPTEDXLQRRGI 938
Query: 130 SGPAVCQLCFQHSEDLDHCFLDCPIVRSNWEYFTGVF 20
+C+LC ++SE DH F C + W + F
Sbjct: 939 PLAPICZLCHKNSESXDHLFSXCXFAQCAWXWLATQF 975