BLASTX nr result

ID: Rehmannia28_contig00028124 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00028124
         (458 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012834839.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    64   4e-09
ref|XP_011084681.1| PREDICTED: pentatricopeptide repeat-containi...    59   1e-07

>ref|XP_012834839.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g03100, mitochondrial [Erythranthe guttata]
          Length = 767

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +2

Query: 269 MLLIRKLSGRPTVNYILHSFLGKISKCPCVAGRAH-KSFTDLHGQNGISTFRHGFKHFSH 445
           M L RKLS R T NYILH F  + SKCPCVA R H KSF+  + QN +STF   + H S+
Sbjct: 1   MSLTRKLSLRATANYILHRF-SRNSKCPCVANRYHHKSFSHSYSQNSVSTFCLKYGHPSN 59

Query: 446 NFT 454
           NFT
Sbjct: 60  NFT 62


>ref|XP_011084681.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial [Sesamum indicum]
           gi|747075306|ref|XP_011084682.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial [Sesamum indicum]
          Length = 770

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = +2

Query: 272 LLIRKLSGRPTVNYILHSFLGKISKCPCVAGRAHKSFTDLHGQNGISTFRHGFKHFSHNF 451
           +L RKLS +   NYILHS LG+ISKCP VA R H S +    Q+ +S  R G + FS+NF
Sbjct: 1   MLTRKLSRQLAANYILHS-LGRISKCPRVANRGHNSISHFFWQSSVSECRDGLELFSNNF 59

Query: 452 T 454
           +
Sbjct: 60  S 60


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