BLASTX nr result
ID: Rehmannia28_contig00027943
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00027943
(401 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP59195.1| hypothetical protein KK1_014627 [Cajanus cajan] 67 2e-14
gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposo... 66 6e-14
gb|KYP52235.1| Copia protein [Cajanus cajan] 62 8e-14
gb|KYP70981.1| Retrovirus-related Pol polyprotein from transposo... 58 6e-13
gb|KYP78991.1| Copia protein [Cajanus cajan] 70 6e-13
gb|KYP74315.1| Copia protein [Cajanus cajan] 69 7e-13
gb|KYP70034.1| Copia protein [Cajanus cajan] 69 7e-13
gb|KYP32609.1| Copia protein [Cajanus cajan] 69 7e-13
gb|KYP64096.1| Copia protein [Cajanus cajan] 59 1e-12
gb|KYP63463.1| Retrovirus-related Pol polyprotein from transposo... 58 1e-12
gb|KYP59731.1| Copia protein, partial [Cajanus cajan] 58 1e-12
gb|KYP69952.1| Copia protein [Cajanus cajan] 58 1e-12
gb|KYP70035.1| Copia protein [Cajanus cajan] 58 1e-12
gb|KYP48844.1| Copia protein, partial [Cajanus cajan] gi|1012350... 58 2e-12
emb|CAN74310.1| hypothetical protein VITISV_037517 [Vitis vinifera] 61 2e-12
gb|KYP63859.1| Copia protein [Cajanus cajan] 67 2e-12
emb|CAN71418.1| hypothetical protein VITISV_042084 [Vitis vinifera] 62 2e-12
emb|CAN62924.1| hypothetical protein VITISV_033234 [Vitis vinifera] 60 2e-12
gb|KYP55562.1| Copia protein [Cajanus cajan] 58 3e-12
emb|CAN69286.1| hypothetical protein VITISV_028682 [Vitis vinifera] 61 3e-12
>gb|KYP59195.1| hypothetical protein KK1_014627 [Cajanus cajan]
Length = 273
Score = 67.0 bits (162), Expect(2) = 2e-14
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +3
Query: 57 SSHFTRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
SS +++DQLADIFTKSLRGP ITYIC+K+DAYD+YAP
Sbjct: 236 SSVYSKDQLADIFTKSLRGPSITYICNKLDAYDIYAP 272
Score = 38.5 bits (88), Expect(2) = 2e-14
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHV 75
TKH EVDCHF+R K+LS + TS V
Sbjct: 214 TKHIEVDCHFIREKILSSIIKTSSV 238
>gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1355
Score = 65.9 bits (159), Expect(2) = 6e-14
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +3
Query: 57 SSHFTRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
SS ++DQLADIFTKSLRGPRITYIC+K+D YD+YAP
Sbjct: 1318 SSVCSKDQLADIFTKSLRGPRITYICNKLDVYDIYAP 1354
Score = 38.1 bits (87), Expect(2) = 6e-14
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHV 75
TKH EVDCHF+R K+LS + TS V
Sbjct: 1296 TKHIEVDCHFIREKILSDIIKTSSV 1320
>gb|KYP52235.1| Copia protein [Cajanus cajan]
Length = 397
Score = 62.4 bits (150), Expect(2) = 8e-14
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAPP*GGELE 188
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP GG L+
Sbjct: 358 DQLADVFTKSLKGPRVDYICNKLGAYDIYAPAWGGVLQ 395
Score = 41.2 bits (95), Expect(2) = 8e-14
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHFVR KVLS E+ T V +S
Sbjct: 330 TKHIEIDCHFVREKVLSGEITTEFVHSS 357
>gb|KYP70981.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 388
Score = 58.2 bits (139), Expect(2) = 6e-13
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP
Sbjct: 357 DQLADVFTKSLKGPRVDYICNKLGAYDIYAP 387
Score = 42.4 bits (98), Expect(2) = 6e-13
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHF+R KVLS+E+ T V +S
Sbjct: 329 TKHIEIDCHFIREKVLSREITTKFVHSS 356
>gb|KYP78991.1| Copia protein [Cajanus cajan]
Length = 134
Score = 70.1 bits (170), Expect = 6e-13
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +3
Query: 42 GAI*GSSHFTRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
G I SS F++DQLADIFTKSL+GPRITYIC+K+DAYD+YAP
Sbjct: 92 GIIKTSSVFSKDQLADIFTKSLQGPRITYICNKLDAYDIYAP 133
>gb|KYP74315.1| Copia protein [Cajanus cajan]
Length = 82
Score = 68.6 bits (166), Expect = 7e-13
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 42 GAI*GSSHFTRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
G I SS ++DQLADIFTKSLRGPRITYIC+K+DAYD+YAP
Sbjct: 40 GIIKTSSVCSKDQLADIFTKSLRGPRITYICNKLDAYDIYAP 81
>gb|KYP70034.1| Copia protein [Cajanus cajan]
Length = 82
Score = 68.6 bits (166), Expect = 7e-13
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 42 GAI*GSSHFTRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
G I SS ++DQLADIFTKSLRGPRITYIC+K+DAYD+YAP
Sbjct: 40 GIIKTSSVCSKDQLADIFTKSLRGPRITYICNKLDAYDIYAP 81
>gb|KYP32609.1| Copia protein [Cajanus cajan]
Length = 82
Score = 68.6 bits (166), Expect = 7e-13
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 42 GAI*GSSHFTRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
G I SS ++DQLADIFTKSLRGPRITYIC+K+DAYD+YAP
Sbjct: 40 GIIKTSSVCSKDQLADIFTKSLRGPRITYICNKLDAYDIYAP 81
>gb|KYP64096.1| Copia protein [Cajanus cajan]
Length = 314
Score = 58.5 bits (140), Expect(2) = 1e-12
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP
Sbjct: 283 DQLADVFTKSLKGPRVNYICNKLGAYDIYAP 313
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHFVR KVLS E+ T V +S
Sbjct: 255 TKHIEIDCHFVREKVLSGEITTKFVRSS 282
>gb|KYP63463.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 402
Score = 58.2 bits (139), Expect(2) = 1e-12
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP
Sbjct: 371 DQLADVFTKSLKGPRVDYICNKLGAYDIYAP 401
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHFVR KVLS E+ T V +S
Sbjct: 343 TKHIEIDCHFVREKVLSGEITTEFVHSS 370
>gb|KYP59731.1| Copia protein, partial [Cajanus cajan]
Length = 268
Score = 58.2 bits (139), Expect(2) = 1e-12
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP
Sbjct: 237 DQLADVFTKSLKGPRVDYICNKLGAYDIYAP 267
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHFVR KVLS E+ T V +S
Sbjct: 209 TKHIEIDCHFVREKVLSGEITTEFVHSS 236
>gb|KYP69952.1| Copia protein [Cajanus cajan]
Length = 243
Score = 58.2 bits (139), Expect(2) = 1e-12
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP
Sbjct: 212 DQLADVFTKSLKGPRVDYICNKLGAYDIYAP 242
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHFVR KVLS E+ T V +S
Sbjct: 184 TKHIEIDCHFVREKVLSGEITTEFVHSS 211
>gb|KYP70035.1| Copia protein [Cajanus cajan]
Length = 183
Score = 58.2 bits (139), Expect(2) = 1e-12
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP
Sbjct: 152 DQLADVFTKSLKGPRVDYICNKLGAYDIYAP 182
Score = 41.2 bits (95), Expect(2) = 1e-12
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHFVR KVLS E+ T V +S
Sbjct: 124 TKHIEIDCHFVREKVLSGEITTEFVHSS 151
>gb|KYP48844.1| Copia protein, partial [Cajanus cajan] gi|1012350268|gb|KYP61457.1|
Copia protein, partial [Cajanus cajan]
Length = 87
Score = 58.2 bits (139), Expect(2) = 2e-12
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP
Sbjct: 56 DQLADVFTKSLKGPRVDYICNKLGAYDIYAP 86
Score = 41.2 bits (95), Expect(2) = 2e-12
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHFVR KVLS E+ T V +S
Sbjct: 28 TKHIEIDCHFVREKVLSGEITTEFVHSS 55
>emb|CAN74310.1| hypothetical protein VITISV_037517 [Vitis vinifera]
Length = 1266
Score = 60.8 bits (146), Expect(2) = 2e-12
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +3
Query: 69 TRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
+ DQLADIFTKSLRGPRI YIC+K+ AYDVYAP
Sbjct: 1233 SNDQLADIFTKSLRGPRIKYICNKLGAYDVYAP 1265
Score = 38.1 bits (87), Expect(2) = 2e-12
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHV 75
TKH EVDCHF+R K+ S+ V TS V
Sbjct: 1207 TKHIEVDCHFIREKIASRCVATSFV 1231
>gb|KYP63859.1| Copia protein [Cajanus cajan]
Length = 82
Score = 67.4 bits (163), Expect = 2e-12
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 42 GAI*GSSHFTRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
G I S+ ++DQLADIFTKSLRGPRITYIC+K+DAYD+YAP
Sbjct: 40 GIIKTSAICSKDQLADIFTKSLRGPRITYICNKLDAYDIYAP 81
>emb|CAN71418.1| hypothetical protein VITISV_042084 [Vitis vinifera]
Length = 107
Score = 62.0 bits (149), Expect(2) = 2e-12
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +3
Query: 69 TRDQLADIFTKSLRGPRITYICDKMDAYDVYAPP 170
+ DQLADIFTKSL+GPRI YIC+K+ AYD+YAPP
Sbjct: 74 SNDQLADIFTKSLKGPRIKYICNKLGAYDIYAPP 107
Score = 36.6 bits (83), Expect(2) = 2e-12
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHV 75
TKH EVDCHF+R K+ S V TS V
Sbjct: 48 TKHIEVDCHFIREKITSGCVATSFV 72
>emb|CAN62924.1| hypothetical protein VITISV_033234 [Vitis vinifera]
Length = 107
Score = 60.5 bits (145), Expect(2) = 2e-12
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +3
Query: 69 TRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
+ DQLADIFTKSLRGPRI YIC+K+ AYD+YAP
Sbjct: 74 SNDQLADIFTKSLRGPRIKYICNKLGAYDIYAP 106
Score = 38.1 bits (87), Expect(2) = 2e-12
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHV 75
TKH EVDCHF+R K+ S+ V TS V
Sbjct: 48 TKHIEVDCHFIREKIASRCVATSFV 72
>gb|KYP55562.1| Copia protein [Cajanus cajan]
Length = 101
Score = 58.2 bits (139), Expect(2) = 3e-12
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +3
Query: 75 DQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
DQLAD+FTKSL+GPR+ YIC+K+ AYD+YAP
Sbjct: 70 DQLADVFTKSLKGPRVDYICNKLGAYDIYAP 100
Score = 40.4 bits (93), Expect(2) = 3e-12
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHVINS 84
TKH E+DCHFVR KVLS E+ T V +S
Sbjct: 42 TKHIEIDCHFVREKVLSGEISTEFVHSS 69
>emb|CAN69286.1| hypothetical protein VITISV_028682 [Vitis vinifera]
Length = 82
Score = 61.2 bits (147), Expect(2) = 3e-12
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +3
Query: 69 TRDQLADIFTKSLRGPRITYICDKMDAYDVYAP 167
+ DQLADIFTKSLRGPRI YIC+K+DAY++YAP
Sbjct: 49 SNDQLADIFTKSLRGPRIKYICNKLDAYNIYAP 81
Score = 37.4 bits (85), Expect(2) = 3e-12
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 1 TKHTEVDCHFVRTKVLSKEVVTSHV 75
TKH EVDCHF+R K+ S V TS V
Sbjct: 23 TKHIEVDCHFIREKITSGYVATSFV 47