BLASTX nr result

ID: Rehmannia28_contig00027847 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00027847
         (454 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081010.1| PREDICTED: F-box protein At3g07870-like [Ses...    93   2e-28
ref|XP_011081011.1| PREDICTED: F-box protein At3g07870-like [Ses...    70   2e-11

>ref|XP_011081010.1| PREDICTED: F-box protein At3g07870-like [Sesamum indicum]
          Length = 411

 Score = 93.2 bits (230), Expect(2) = 2e-28
 Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
 Frame = +1

Query: 229 DYSWDACSTFLNGVIYWLNNSTVDAFFFDFEREVFGDIELPPEFGEEHLRIKCCMSIGVL 408
           D SWD CS  ++GV+YWL+ +  D  FFDFERE+FG+I LP E+GEE L     MSIGVL
Sbjct: 225 DISWDDCSATVDGVLYWLDQTWKDIVFFDFERELFGEIALPSEYGEEQLSKIEFMSIGVL 284

Query: 409 AGCLCLT--TYNAHHVD 453
            GCLCL+   +NA HVD
Sbjct: 285 GGCLCLSYNVHNAPHVD 301



 Score = 59.3 bits (142), Expect(2) = 2e-28
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = +3

Query: 6   EYIMIPDVVVHENSIFLRTKSMWLGFSPITNQYKVLRIFSVINVDDGHWLMRAQVLVIGS 185
           EY M+P V   E  +   TKSMWLG+S  +NQYKVLR++S IN  DG   M AQVLV+GS
Sbjct: 155 EYFMMPSVD-RETRLLFGTKSMWLGYSSGSNQYKVLRLYSRIN--DGPLDMGAQVLVVGS 211

Query: 186 S 188
           +
Sbjct: 212 N 212


>ref|XP_011081011.1| PREDICTED: F-box protein At3g07870-like [Sesamum indicum]
          Length = 408

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
 Frame = +1

Query: 187 VHVNTSDN-----DILLRHDYSWDACSTFLNGVIYWL---NNSTVDAFFFDFEREVFGDI 342
           VHV  SD+     D  L    SWD CS FLNG + WL      +    FFDF++E FG+I
Sbjct: 204 VHVVGSDSWRYLEDKPLSEYLSWDTCSVFLNGTVNWLCKYPELSKFIIFFDFQKEKFGEI 263

Query: 343 ELPPEFGEEHLRIKCCMSIGVLAGCLCLTTYNAH 444
             PP FG +    K  MSIGVL G LC+T    H
Sbjct: 264 LPPPSFGIDQRLSKQSMSIGVLGGYLCVTDDTQH 297


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