BLASTX nr result
ID: Rehmannia28_contig00027834
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00027834
(644 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087684.1| PREDICTED: uncharacterized protein LOC105169... 86 4e-16
ref|XP_011092410.1| PREDICTED: protein RAE1-like [Sesamum indicum] 84 1e-15
ref|XP_011087841.1| PREDICTED: protein RAE1-like [Sesamum indicum] 84 1e-15
gb|KDO45597.1| hypothetical protein CISIN_1g041215mg, partial [C... 79 3e-15
ref|NP_178182.1| Rae1-like protein [Arabidopsis thaliana] gi|833... 82 5e-15
ref|XP_006302480.1| hypothetical protein CARUB_v10020569mg [Caps... 82 5e-15
ref|XP_004969266.1| PREDICTED: protein RAE1-like [Setaria italic... 82 7e-15
ref|XP_006389821.1| hypothetical protein EUTSA_v10018796mg [Eutr... 80 2e-14
ref|XP_010539531.1| PREDICTED: protein RAE1 [Tarenaya hasslerian... 80 2e-14
ref|XP_002887816.1| transducin family protein [Arabidopsis lyrat... 80 2e-14
gb|EPS58833.1| hypothetical protein M569_15979 [Genlisea aurea] 80 2e-14
ref|XP_010537897.1| PREDICTED: protein RAE1 [Tarenaya hasslerian... 80 3e-14
ref|XP_002527320.1| PREDICTED: protein RAE1 [Ricinus communis] g... 80 3e-14
gb|AFI39639.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase, ... 75 3e-14
ref|XP_012850326.1| PREDICTED: bromodomain-containing protein 3 ... 81 3e-14
ref|XP_013650333.1| PREDICTED: protein RAE1-like isoform X2 [Bra... 80 3e-14
ref|XP_013590006.1| PREDICTED: protein RAE1-like isoform X3 [Bra... 80 3e-14
ref|XP_013676929.1| PREDICTED: protein RAE1-like [Brassica napus... 80 3e-14
ref|XP_009128399.1| PREDICTED: rae1-like protein At1g80670 [Bras... 80 3e-14
ref|XP_013590005.1| PREDICTED: protein RAE1-like isoform X2 [Bra... 80 3e-14
>ref|XP_011087684.1| PREDICTED: uncharacterized protein LOC105169093 [Sesamum indicum]
gi|747080837|ref|XP_011087685.1| PREDICTED:
uncharacterized protein LOC105169093 [Sesamum indicum]
Length = 579
Score = 86.3 bits (212), Expect = 4e-16
Identities = 48/68 (70%), Positives = 50/68 (73%), Gaps = 6/68 (8%)
Frame = -1
Query: 644 ESLDKNQRTKMLEN------PMLLELFGTLFADNSRSFWNGPHSLVGGHNQVSYRRRFFC 483
E LDKNQR KMLEN PMLLEL+GTLF DNS SFWNGPHSLV HN+VS RR
Sbjct: 513 ELLDKNQRAKMLENLHYLENPMLLELYGTLFTDNSSSFWNGPHSLV-DHNRVSKRRSSLH 571
Query: 482 SAISSLMK 459
SAISS MK
Sbjct: 572 SAISSFMK 579
>ref|XP_011092410.1| PREDICTED: protein RAE1-like [Sesamum indicum]
Length = 348
Score = 83.6 bits (205), Expect = 1e-15
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQSSKNFTFKC RDGNDIY+V LNFHP
Sbjct: 213 VGSIEGRVGVHHLDDSQSSKNFTFKCHRDGNDIYSVNSLNFHP 255
>ref|XP_011087841.1| PREDICTED: protein RAE1-like [Sesamum indicum]
Length = 348
Score = 83.6 bits (205), Expect = 1e-15
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQSSKNFTFKC RDGNDIY+V LNFHP
Sbjct: 213 VGSIEGRVGVHHLDDSQSSKNFTFKCHRDGNDIYSVNSLNFHP 255
>gb|KDO45597.1| hypothetical protein CISIN_1g041215mg, partial [Citrus sinensis]
Length = 136
Score = 78.6 bits (192), Expect = 3e-15
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ SKNFTFKC RDG++IY+V LNFHP
Sbjct: 1 VGSIEGRVGVHHLDDSQQSKNFTFKCHRDGSEIYSVNSLNFHP 43
>ref|NP_178182.1| Rae1-like protein [Arabidopsis thaliana]
gi|83305440|sp|Q38942.2|RAE1_ARATH RecName: Full=Protein
RAE1; AltName: Full=RNA export factor 1
gi|6503279|gb|AAF14655.1|AC011713_3 F23A5.2(form2)
[Arabidopsis thaliana] gi|21593271|gb|AAM65220.1| mRNA
export protein, putative [Arabidopsis thaliana]
gi|94442413|gb|ABF18994.1| At1g80670 [Arabidopsis
thaliana] gi|332198314|gb|AEE36435.1| Rae1-like protein
[Arabidopsis thaliana]
Length = 349
Score = 82.0 bits (201), Expect = 5e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ SKNFTFKC RDGNDIY+V LNFHP
Sbjct: 214 VGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNDIYSVNSLNFHP 256
>ref|XP_006302480.1| hypothetical protein CARUB_v10020569mg [Capsella rubella]
gi|482571190|gb|EOA35378.1| hypothetical protein
CARUB_v10020569mg [Capsella rubella]
Length = 349
Score = 82.0 bits (201), Expect = 5e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ SKNFTFKC RDGNDIY+V LNFHP
Sbjct: 214 VGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNDIYSVNSLNFHP 256
>ref|XP_004969266.1| PREDICTED: protein RAE1-like [Setaria italica]
gi|944241722|gb|KQL06030.1| hypothetical protein
SETIT_004881mg [Setaria italica]
Length = 345
Score = 81.6 bits (200), Expect = 7e-15
Identities = 43/65 (66%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = -1
Query: 341 MAPLVIQ-RKFARLTFYGNFLKVGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTL 165
++PL +Q R A FL VGSIE RVGVHH+DDSQ SKNFTFKC RDGNDIY+V
Sbjct: 192 VSPLKLQTRCLAAFPDQQGFL-VGSIEGRVGVHHVDDSQQSKNFTFKCHRDGNDIYSVNS 250
Query: 164 LNFHP 150
LNFHP
Sbjct: 251 LNFHP 255
>ref|XP_006389821.1| hypothetical protein EUTSA_v10018796mg [Eutrema salsugineum]
gi|557086255|gb|ESQ27107.1| hypothetical protein
EUTSA_v10018796mg [Eutrema salsugineum]
Length = 348
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ SKNFTFKC RDGN+IY+V LNFHP
Sbjct: 214 VGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNEIYSVNSLNFHP 256
>ref|XP_010539531.1| PREDICTED: protein RAE1 [Tarenaya hassleriana]
gi|729339408|ref|XP_010539532.1| PREDICTED: protein RAE1
[Tarenaya hassleriana]
Length = 349
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ SKNFTFKC RDGN+IY+V LNFHP
Sbjct: 214 VGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNEIYSVNSLNFHP 256
>ref|XP_002887816.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333657|gb|EFH64075.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 349
Score = 80.5 bits (197), Expect = 2e-14
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ SKNFTFKC RDGN+IY+V LNFHP
Sbjct: 214 VGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNEIYSVNSLNFHP 256
>gb|EPS58833.1| hypothetical protein M569_15979 [Genlisea aurea]
Length = 396
Score = 80.5 bits (197), Expect = 2e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHH+DDS SSKNFTFKC RDGND+Y+V LNFHP
Sbjct: 261 VGSIEGRVGVHHIDDSHSSKNFTFKCHRDGNDVYSVNSLNFHP 303
>ref|XP_010537897.1| PREDICTED: protein RAE1 [Tarenaya hassleriana]
gi|729334646|ref|XP_010537898.1| PREDICTED: protein RAE1
[Tarenaya hassleriana] gi|729334649|ref|XP_010537899.1|
PREDICTED: protein RAE1 [Tarenaya hassleriana]
Length = 349
Score = 80.1 bits (196), Expect = 3e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
+GSIE RVGVHHLDDSQ SKNFTFKC RDGN+IY+V LNFHP
Sbjct: 214 IGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNEIYSVNSLNFHP 256
>ref|XP_002527320.1| PREDICTED: protein RAE1 [Ricinus communis]
gi|1000949941|ref|XP_015579743.1| PREDICTED: protein
RAE1 [Ricinus communis] gi|223533320|gb|EEF35072.1|
plant poly(A)+ RNA export protein, putative [Ricinus
communis]
Length = 349
Score = 80.1 bits (196), Expect = 3e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDD+Q +KNFTFKC RDGNDIY+V LNFHP
Sbjct: 214 VGSIEGRVGVHHLDDAQQNKNFTFKCHRDGNDIYSVNALNFHP 256
>gb|AFI39639.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase, partial [Hordeum
chilense]
Length = 86
Score = 74.7 bits (182), Expect = 3e-14
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = -3
Query: 129 AGKDIALANKETLIAGGPFVLPLAQRHGLKLLRADSEYSAIFQ 1
AGKDIALANKETLIAGGPFVLPLA +H +K+L ADSE+SAIFQ
Sbjct: 5 AGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQ 47
>ref|XP_012850326.1| PREDICTED: bromodomain-containing protein 3 [Erythranthe guttata]
gi|848900342|ref|XP_012850327.1| PREDICTED:
bromodomain-containing protein 3 [Erythranthe guttata]
gi|848900344|ref|XP_012850328.1| PREDICTED:
bromodomain-containing protein 3 [Erythranthe guttata]
gi|848900346|ref|XP_012850329.1| PREDICTED:
bromodomain-containing protein 3 [Erythranthe guttata]
gi|604313148|gb|EYU26479.1| hypothetical protein
MIMGU_mgv1a003392mg [Erythranthe guttata]
Length = 588
Score = 80.9 bits (198), Expect = 3e-14
Identities = 45/68 (66%), Positives = 50/68 (73%), Gaps = 6/68 (8%)
Frame = -1
Query: 644 ESLDKNQRTKM------LENPMLLELFGTLFADNSRSFWNGPHSLVGGHNQVSYRRRFFC 483
E L+K QR KM LENPMLLEL+GTLFADNS+S WNGPHSLV G +Q S RR F
Sbjct: 522 EFLNKKQRAKMMENLHYLENPMLLELYGTLFADNSKSLWNGPHSLV-GQSQCSNRRSSFH 580
Query: 482 SAISSLMK 459
SAI+S MK
Sbjct: 581 SAITSFMK 588
>ref|XP_013650333.1| PREDICTED: protein RAE1-like isoform X2 [Brassica napus]
Length = 321
Score = 79.7 bits (195), Expect = 3e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ +KNFTFKC RDGN+IY+V LNFHP
Sbjct: 214 VGSIEGRVGVHHLDDSQQNKNFTFKCHRDGNEIYSVNALNFHP 256
>ref|XP_013590006.1| PREDICTED: protein RAE1-like isoform X3 [Brassica oleracea var.
oleracea]
Length = 326
Score = 79.7 bits (195), Expect = 3e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ +KNFTFKC RDGN+IY+V LNFHP
Sbjct: 219 VGSIEGRVGVHHLDDSQQNKNFTFKCHRDGNEIYSVNALNFHP 261
>ref|XP_013676929.1| PREDICTED: protein RAE1-like [Brassica napus]
gi|923760240|ref|XP_013676930.1| PREDICTED: protein
RAE1-like [Brassica napus]
Length = 346
Score = 79.7 bits (195), Expect = 3e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ +KNFTFKC RDGN+IY+V LNFHP
Sbjct: 212 VGSIEGRVGVHHLDDSQQNKNFTFKCHRDGNEIYSVNALNFHP 254
>ref|XP_009128399.1| PREDICTED: rae1-like protein At1g80670 [Brassica rapa]
gi|922420431|ref|XP_013616091.1| PREDICTED: protein RAE1
[Brassica oleracea var. oleracea]
gi|923529509|ref|XP_013692676.1| PREDICTED: protein RAE1
[Brassica napus] gi|674868269|emb|CDY66129.1|
BnaC02g46520D [Brassica napus]
gi|674878854|emb|CDY53220.1| BnaA02g19480D [Brassica
napus]
Length = 346
Score = 79.7 bits (195), Expect = 3e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ +KNFTFKC RDGN+IY+V LNFHP
Sbjct: 212 VGSIEGRVGVHHLDDSQQNKNFTFKCHRDGNEIYSVNALNFHP 254
>ref|XP_013590005.1| PREDICTED: protein RAE1-like isoform X2 [Brassica oleracea var.
oleracea] gi|923914739|ref|XP_013726940.1| PREDICTED:
protein RAE1-like [Brassica napus]
Length = 348
Score = 79.7 bits (195), Expect = 3e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 278 VGSIERRVGVHHLDDSQSSKNFTFKCQRDGNDIYTVTLLNFHP 150
VGSIE RVGVHHLDDSQ +KNFTFKC RDGN+IY+V LNFHP
Sbjct: 214 VGSIEGRVGVHHLDDSQQNKNFTFKCHRDGNEIYSVNALNFHP 256