BLASTX nr result
ID: Rehmannia28_contig00027822
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00027822
(462 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AMA06704.1| ribosomal protein S3 (mitochondrion) [Oryza minuta] 96 3e-29
gb|AMQ23369.1| ribosomal protein S3 (mitochondrion) [Oryza minuta] 96 3e-29
ref|XP_012575409.1| PREDICTED: uncharacterized protein LOC105852... 77 4e-21
gb|EEF49599.1| conserved hypothetical protein [Ricinus communis] 96 6e-21
gb|KVF63445.1| hypothetical protein Ccrd_026728 [Cynara carduncu... 78 3e-16
gb|EEF32829.1| conserved hypothetical protein [Ricinus communis] 66 1e-11
gb|KVI11367.1| cytochrome c oxidase subunit I [Cynara cardunculu... 69 2e-11
gb|EEF26991.1| conserved hypothetical protein [Ricinus communis]... 60 3e-09
>gb|AMA06704.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
Length = 1154
Score = 95.5 bits (236), Expect(2) = 3e-29
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = -2
Query: 449 GHDFFYSKARRPLKDTQD*SMS*KKHTGRACFDRVSGAQLNVDIMNARCRIPGRETRATT 270
G D S ARRP ++T+D SMS K HTGRACFDRVSGAQLNVDIMNAR RIPGRETRA+T
Sbjct: 58 GTDTTSSNARRPQEETRDQSMSSKTHTGRACFDRVSGAQLNVDIMNARIRIPGRETRAST 117
Query: 269 PLCANR*RIQGP 234
PL GP
Sbjct: 118 PLMCRSLAHPGP 129
Score = 60.1 bits (144), Expect(2) = 3e-29
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = -3
Query: 148 PWNQ*EKKC*VSDQ*ITRNERRDISRSAPKAHYAPLQQMRVFGGTGEPR 2
P + KC VS Q E+RD+SRSAP HYAPLQQMRVFGGTGEPR
Sbjct: 158 PQESIKNKCLVSFQISELTEKRDLSRSAP--HYAPLQQMRVFGGTGEPR 204
Score = 64.3 bits (155), Expect = 3e-09
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Frame = -1
Query: 309 EVQDTRPRNPGNHSP-----MCQSLAHPGPRRPAQLERPSLI*EVLIRFG*TSFKNAAAL 145
++ + R R PG + MC+SLAHPGPRRPA LERPSLI +V +RFG T NA
Sbjct: 100 DIMNARIRIPGRETRASTPLMCRSLAHPGPRRPAPLERPSLISKVRLRFGLTDSANALPQ 159
Query: 144 -GINKKRSAKFQISE*PETKE 85
I K FQISE E ++
Sbjct: 160 ESIKNKCLVSFQISELTEKRD 180
>gb|AMQ23369.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
Length = 1150
Score = 95.5 bits (236), Expect(2) = 3e-29
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = -2
Query: 449 GHDFFYSKARRPLKDTQD*SMS*KKHTGRACFDRVSGAQLNVDIMNARCRIPGRETRATT 270
G D S ARRP ++T+D SMS K HTGRACFDRVSGAQLNVDIMNAR RIPGRETRA+T
Sbjct: 58 GTDTTSSNARRPQEETRDQSMSSKTHTGRACFDRVSGAQLNVDIMNARIRIPGRETRAST 117
Query: 269 PLCANR*RIQGP 234
PL GP
Sbjct: 118 PLMCRSLAHPGP 129
Score = 60.1 bits (144), Expect(2) = 3e-29
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = -3
Query: 148 PWNQ*EKKC*VSDQ*ITRNERRDISRSAPKAHYAPLQQMRVFGGTGEPR 2
P + KC VS Q E+RD+SRSAP HYAPLQQMRVFGGTGEPR
Sbjct: 158 PQESIKNKCLVSFQISELTEKRDLSRSAP--HYAPLQQMRVFGGTGEPR 204
Score = 64.3 bits (155), Expect = 3e-09
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Frame = -1
Query: 309 EVQDTRPRNPGNHSP-----MCQSLAHPGPRRPAQLERPSLI*EVLIRFG*TSFKNAAAL 145
++ + R R PG + MC+SLAHPGPRRPA LERPSLI +V +RFG T NA
Sbjct: 100 DIMNARIRIPGRETRASTPLMCRSLAHPGPRRPAPLERPSLISKVRLRFGLTDSANALPQ 159
Query: 144 -GINKKRSAKFQISE*PETKE 85
I K FQISE E ++
Sbjct: 160 ESIKNKCLVSFQISELTEKRD 180
>ref|XP_012575409.1| PREDICTED: uncharacterized protein LOC105852994 [Cicer arietinum]
Length = 385
Score = 77.0 bits (188), Expect(2) = 4e-21
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = +3
Query: 273 GCPGFSAWYPAPRVHDIYIQLCPGDTVEARPPSVLLSRHALVLGVFQWSS 422
GCPGFSAWYP PR+HDIYIQ G+TVEARPPSVLLSRH L L + SS
Sbjct: 107 GCPGFSAWYPTPRIHDIYIQ---GNTVEARPPSVLLSRHVLELAYNRLSS 153
Score = 51.2 bits (121), Expect(2) = 4e-21
Identities = 35/95 (36%), Positives = 37/95 (38%)
Frame = +2
Query: 2 AWFTGSTENSHLLKRSIVRFRRRARNVSSFVSGYSXXXXXXXXXXXXXXXXXXXNEVYPN 181
AWF GST+NSHLLK SIVRFRRRA
Sbjct: 69 AWFIGSTKNSHLLKWSIVRFRRRA------------------------------------ 92
Query: 182 RISTSQIRLGLSS*AGRRGPGCASDWHIGEWLPGF 286
R+GPGCASD HIG PGF
Sbjct: 93 ----------------RKGPGCASDRHIGVGCPGF 111
>gb|EEF49599.1| conserved hypothetical protein [Ricinus communis]
Length = 813
Score = 95.9 bits (237), Expect(2) = 6e-21
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = +1
Query: 262 HRGVVARVSRPGILHLAFMISTFNCAPETRSKHARPVCFFHDML*SW 402
H GVVARVSRPGILHLAFMISTF CAPETRSKHARPVCFFHDML SW
Sbjct: 753 HMGVVARVSRPGILHLAFMISTFRCAPETRSKHARPVCFFHDMLWSW 799
Score = 31.6 bits (70), Expect(2) = 6e-21
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 227 GRRGPGCASDWHIG 268
GRRGPGCASD H+G
Sbjct: 742 GRRGPGCASDRHMG 755
>gb|KVF63445.1| hypothetical protein Ccrd_026728 [Cynara cardunculus var. scolymus]
Length = 83
Score = 77.8 bits (190), Expect = 3e-16
Identities = 53/105 (50%), Positives = 53/105 (50%)
Frame = -3
Query: 460 MSGADTTSSILRLEDH*KTPRTRACRERSTLGGRASTVSPGHS*M*IS*TRGAGYQAEKP 281
MSG DT SS R KTP RACRERSTL R YQAEK
Sbjct: 1 MSGTDTNSSNARRPL--KTPGPRACRERSTLDRR--------------------YQAEKA 38
Query: 280 GQPLPYVXXXXXXXXXXXXXXXXXXPDLRSANSVRIDFIQECRRP 146
GQPLPYV PDLRSANSVRIDFIQECRRP
Sbjct: 39 GQPLPYVPIASAARAPAPSSAGEASPDLRSANSVRIDFIQECRRP 83
>gb|EEF32829.1| conserved hypothetical protein [Ricinus communis]
Length = 93
Score = 66.2 bits (160), Expect = 1e-11
Identities = 34/43 (79%), Positives = 35/43 (81%)
Frame = -3
Query: 460 MSGADTTSSILRLEDH*KTPRTRACRERSTLGGRASTVSPGHS 332
MSG DTTSS +EDH P TRACRERSTLGGRASTVSPGHS
Sbjct: 53 MSGTDTTSS--NVEDHRNIPGTRACRERSTLGGRASTVSPGHS 93
>gb|KVI11367.1| cytochrome c oxidase subunit I [Cynara cardunculus var. scolymus]
Length = 276
Score = 69.3 bits (168), Expect = 2e-11
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +2
Query: 164 NEVYPNRISTSQIRLGLSS*AGRRGPGCASDWHIGEWLPGFLGLV 298
N+VYPNRI+TS IR GL S AG R PGC S+WHI E LPGFLGLV
Sbjct: 191 NKVYPNRINTSHIRQGLYSRAGHRVPGCTSNWHIEESLPGFLGLV 235
>gb|EEF26991.1| conserved hypothetical protein [Ricinus communis]
gi|223523475|gb|EEF27071.1| conserved hypothetical
protein [Ricinus communis]
Length = 94
Score = 60.1 bits (144), Expect = 3e-09
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -3
Query: 442 TSSILRLEDH*KTPRTRACRERSTLGGRASTVSPGHS 332
T +L LEDH P TRACRERSTLGGRASTVSPGHS
Sbjct: 58 TRLLLTLEDHRNIPGTRACRERSTLGGRASTVSPGHS 94