BLASTX nr result
ID: Rehmannia28_contig00027776
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00027776
(563 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087742.1| PREDICTED: putative pentatricopeptide repeat... 57 3e-16
ref|XP_012850148.1| PREDICTED: pentatricopeptide repeat-containi... 55 5e-14
ref|XP_015083501.1| PREDICTED: pentatricopeptide repeat-containi... 48 3e-11
ref|XP_004231338.2| PREDICTED: pentatricopeptide repeat-containi... 48 3e-11
ref|XP_015083510.1| PREDICTED: pentatricopeptide repeat-containi... 48 3e-11
gb|EPS73257.1| hypothetical protein M569_01496 [Genlisea aurea] 49 3e-11
ref|XP_015165000.1| PREDICTED: pentatricopeptide repeat-containi... 48 3e-11
ref|XP_015165041.1| PREDICTED: pentatricopeptide repeat-containi... 47 1e-10
ref|XP_008356987.1| PREDICTED: putative pentatricopeptide repeat... 47 3e-10
ref|XP_008379537.1| PREDICTED: putative pentatricopeptide repeat... 47 3e-10
ref|XP_009800009.1| PREDICTED: pentatricopeptide repeat-containi... 47 4e-10
ref|XP_009616454.1| PREDICTED: pentatricopeptide repeat-containi... 45 1e-09
ref|XP_008233431.1| PREDICTED: pentatricopeptide repeat-containi... 45 1e-09
ref|XP_007218862.1| hypothetical protein PRUPE_ppa002838mg [Prun... 44 3e-09
ref|XP_010278845.1| PREDICTED: pentatricopeptide repeat-containi... 50 4e-09
ref|XP_010278851.1| PREDICTED: pentatricopeptide repeat-containi... 50 4e-09
ref|XP_009601536.1| PREDICTED: pentatricopeptide repeat-containi... 49 2e-08
ref|XP_011627682.1| PREDICTED: putative pentatricopeptide repeat... 43 2e-08
ref|XP_009769078.1| PREDICTED: pentatricopeptide repeat-containi... 49 3e-08
gb|KVI11029.1| Pentatricopeptide repeat-containing protein [Cyna... 43 3e-08
>ref|XP_011087742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142 [Sesamum indicum]
Length = 639
Score = 57.4 bits (137), Expect(2) = 3e-16
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = -2
Query: 283 VDLARELFDEMPLKNIVSWTTMISGYT*NRLA 188
VDLA+ELFD+MPLKNIVSWT+MISGYT N LA
Sbjct: 213 VDLAKELFDKMPLKNIVSWTSMISGYTQNGLA 244
Score = 54.7 bits (130), Expect(2) = 3e-16
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDGA 285
D RRLFDEMPVRDV+S NALISGYMRDGA
Sbjct: 184 DARRLFDEMPVRDVASWNALISGYMRDGA 212
>ref|XP_012850148.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Erythranthe guttata]
Length = 639
Score = 55.5 bits (132), Expect(2) = 5e-14
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -2
Query: 280 DLARELFDEMPLKNIVSWTTMISGYT*NRLAVN 182
+LARELFD+MP+KNIVSWT+MISGYT N LA N
Sbjct: 214 ELARELFDKMPVKNIVSWTSMISGYTQNGLADN 246
Score = 48.9 bits (115), Expect(2) = 5e-14
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D R +FD+MP RDVSS NALISGYMRDG
Sbjct: 184 DARNMFDQMPARDVSSWNALISGYMRDG 211
>ref|XP_015083501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like isoform X1 [Solanum pennellii]
Length = 626
Score = 48.1 bits (113), Expect(2) = 3e-11
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D R+LFDEMPVRDVS+ N LI+GYM+DG
Sbjct: 171 DARKLFDEMPVRDVSTWNVLIAGYMKDG 198
Score = 47.0 bits (110), Expect(2) = 3e-11
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A ELF+EMP++NIVSWT MISGY N LA
Sbjct: 203 AEELFEEMPIRNIVSWTAMISGYAQNGLA 231
>ref|XP_004231338.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Solanum lycopersicum]
Length = 626
Score = 48.1 bits (113), Expect(2) = 3e-11
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D R+LFDEMPVRDVS+ N LI+GYM+DG
Sbjct: 171 DARKLFDEMPVRDVSAWNVLIAGYMKDG 198
Score = 47.0 bits (110), Expect(2) = 3e-11
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A ELF+EMP++NIVSWT MISGY N LA
Sbjct: 203 AEELFEEMPIRNIVSWTAMISGYAQNGLA 231
>ref|XP_015083510.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Solanum pennellii]
Length = 586
Score = 48.1 bits (113), Expect(2) = 3e-11
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D R+LFDEMPVRDVS+ N LI+GYM+DG
Sbjct: 131 DARKLFDEMPVRDVSTWNVLIAGYMKDG 158
Score = 47.0 bits (110), Expect(2) = 3e-11
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A ELF+EMP++NIVSWT MISGY N LA
Sbjct: 163 AEELFEEMPIRNIVSWTAMISGYAQNGLA 191
>gb|EPS73257.1| hypothetical protein M569_01496 [Genlisea aurea]
Length = 393
Score = 48.5 bits (114), Expect(2) = 3e-11
Identities = 21/29 (72%), Positives = 27/29 (93%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDGA 285
D R++FDE+PVRDVSS NA+ISGYMR+G+
Sbjct: 63 DARKVFDEIPVRDVSSWNAMISGYMREGS 91
Score = 46.6 bits (109), Expect(2) = 3e-11
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT 203
AR LFDEMP++NIVSWT+MISGYT
Sbjct: 95 ARVLFDEMPVRNIVSWTSMISGYT 118
>ref|XP_015165000.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Solanum tuberosum]
Length = 245
Score = 48.1 bits (113), Expect(2) = 3e-11
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D R+LFDEMPVRDVS+ N LI+GYM+DG
Sbjct: 129 DARKLFDEMPVRDVSTWNVLIAGYMKDG 156
Score = 47.0 bits (110), Expect(2) = 3e-11
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A ELF+EMP++NIVSWT MISGY N LA
Sbjct: 161 AEELFEEMPIRNIVSWTAMISGYAQNGLA 189
>ref|XP_015165041.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Solanum tuberosum]
Length = 289
Score = 47.0 bits (110), Expect(2) = 1e-10
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A ELF+EMP++NIVSWT MISGY N LA
Sbjct: 205 AEELFEEMPIRNIVSWTAMISGYAQNGLA 233
Score = 45.8 bits (107), Expect(2) = 1e-10
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRD 291
D R+LFDEMPVRDVS+ N LI+GYM+D
Sbjct: 173 DARKLFDEMPVRDVSTWNVLIAGYMKD 199
>ref|XP_008356987.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142 [Malus domestica]
Length = 626
Score = 47.4 bits (111), Expect(2) = 3e-10
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D RRLFD+M VRDVSS NALI+GYM+DG
Sbjct: 170 DARRLFDKMTVRDVSSWNALIAGYMKDG 197
Score = 44.3 bits (103), Expect(2) = 3e-10
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -2
Query: 277 LARELFDEMPLKNIVSWTTMISGYT*NRLA 188
LA +LF +MP +NIVSWT MISGYT N LA
Sbjct: 201 LAEDLFGKMPGRNIVSWTAMISGYTQNGLA 230
>ref|XP_008379537.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142 [Malus domestica]
Length = 585
Score = 47.4 bits (111), Expect(2) = 3e-10
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D RRLFD+M VRDVSS NALI+GYM+DG
Sbjct: 129 DARRLFDKMTVRDVSSWNALIAGYMKDG 156
Score = 44.3 bits (103), Expect(2) = 3e-10
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -2
Query: 277 LARELFDEMPLKNIVSWTTMISGYT*NRLA 188
LA +LF +MP +NIVSWT MISGYT N LA
Sbjct: 160 LAEDLFGKMPGRNIVSWTAMISGYTQNGLA 189
>ref|XP_009800009.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Nicotiana sylvestris]
Length = 625
Score = 47.0 bits (110), Expect(2) = 4e-10
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
+ R+ FDEMPVRDVSS NALI+GYM+DG
Sbjct: 170 EARKQFDEMPVRDVSSWNALIAGYMKDG 197
Score = 44.3 bits (103), Expect(2) = 4e-10
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A ELF++MP +NIVSWT MISGY N LA
Sbjct: 202 AEELFEKMPTRNIVSWTAMISGYAQNGLA 230
>ref|XP_009616454.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Nicotiana tomentosiformis]
Length = 625
Score = 45.4 bits (106), Expect(2) = 1e-09
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D R+ FDEM VRDVSS NALI+GYM+DG
Sbjct: 170 DARKQFDEMSVRDVSSWNALIAGYMKDG 197
Score = 44.3 bits (103), Expect(2) = 1e-09
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A ELF++MP +NIVSWT MISGY N LA
Sbjct: 202 AEELFEKMPTRNIVSWTAMISGYAQNGLA 230
>ref|XP_008233431.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Prunus mume]
Length = 332
Score = 45.1 bits (105), Expect(2) = 1e-09
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D R LFD+M VRDVSS NALI+GYM+DG
Sbjct: 129 DARSLFDKMTVRDVSSWNALIAGYMKDG 156
Score = 44.3 bits (103), Expect(2) = 1e-09
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A +LF MP KNIVSWT MISGYT N LA
Sbjct: 161 AEDLFRRMPCKNIVSWTAMISGYTQNGLA 189
>ref|XP_007218862.1| hypothetical protein PRUPE_ppa002838mg [Prunus persica]
gi|462415324|gb|EMJ20061.1| hypothetical protein
PRUPE_ppa002838mg [Prunus persica]
Length = 628
Score = 44.3 bits (103), Expect(2) = 3e-09
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*NRLA 188
A +LF MP KNIVSWT MISGYT N LA
Sbjct: 204 AEDLFRRMPCKNIVSWTAMISGYTQNGLA 232
Score = 43.9 bits (102), Expect(2) = 3e-09
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDGAS*FSKRAIR 258
D R FD+M VRDVSS NALI+GYM+DG F++ R
Sbjct: 172 DARSSFDKMTVRDVSSWNALIAGYMKDGEICFAEDLFR 209
>ref|XP_010278845.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like isoform X1 [Nelumbo nucifera]
gi|720073874|ref|XP_010278846.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like isoform X1 [Nelumbo nucifera]
gi|720073877|ref|XP_010278847.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like isoform X1 [Nelumbo nucifera]
gi|720073881|ref|XP_010278848.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like isoform X1 [Nelumbo nucifera]
gi|720073884|ref|XP_010278849.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like isoform X1 [Nelumbo nucifera]
gi|720073887|ref|XP_010278850.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like isoform X1 [Nelumbo nucifera]
Length = 703
Score = 50.1 bits (118), Expect(2) = 4e-09
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*N 197
ARELFDEMP +N+VSWTTMISGYT N
Sbjct: 190 ARELFDEMPRRNVVSWTTMISGYTQN 215
Score = 37.7 bits (86), Expect(2) = 4e-09
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
+ RRLFDE+PV+DV +R +ISGY +G
Sbjct: 158 EARRLFDEIPVKDVVARTNMISGYCLEG 185
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGY 206
AR++FD MP +N+VSWT+M+ GY
Sbjct: 97 ARKIFDTMPERNVVSWTSMVRGY 119
Score = 37.7 bits (86), Expect(2) = 9e-06
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1
Query: 386 NEVRHDRRRLFDEMPVRDVSSRNALISGYMRD 291
N + + RRLFD MP R+ SS N +ISGY+++
Sbjct: 60 NHLPQEARRLFDRMPERNTSSWNGMISGYIKN 91
>ref|XP_010278851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like isoform X2 [Nelumbo nucifera]
gi|720073893|ref|XP_010278852.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like isoform X2 [Nelumbo nucifera]
Length = 662
Score = 50.1 bits (118), Expect(2) = 4e-09
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGYT*N 197
ARELFDEMP +N+VSWTTMISGYT N
Sbjct: 149 ARELFDEMPRRNVVSWTTMISGYTQN 174
Score = 37.7 bits (86), Expect(2) = 4e-09
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
+ RRLFDE+PV+DV +R +ISGY +G
Sbjct: 117 EARRLFDEIPVKDVVARTNMISGYCLEG 144
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -2
Query: 274 ARELFDEMPLKNIVSWTTMISGY 206
AR++FD MP +N+VSWT+M+ GY
Sbjct: 56 ARKIFDTMPERNVVSWTSMVRGY 78
Score = 37.7 bits (86), Expect(2) = 9e-06
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1
Query: 386 NEVRHDRRRLFDEMPVRDVSSRNALISGYMRD 291
N + + RRLFD MP R+ SS N +ISGY+++
Sbjct: 19 NHLPQEARRLFDRMPERNTSSWNGMISGYIKN 50
>ref|XP_009601536.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Nicotiana tomentosiformis]
Length = 800
Score = 48.5 bits (114), Expect(2) = 2e-08
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 283 VDLARELFDEMPLKNIVSWTTMISGYT*NRLAVNV-GFFCCLLCRALY*W 137
+DLARE F+ MP KN+ SW TMI+GY N V+ F C+ CR W
Sbjct: 347 MDLAREFFEAMPCKNVSSWNTMITGYAQNGDIVSARSLFHCMPCRDCISW 396
Score = 36.6 bits (83), Expect(2) = 2e-08
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = -1
Query: 386 NEVRHDRRRLFDEMPVRDVSSRNALISGYMRDG 288
N+ + R+LFDE P+RDV + +++SGY+++G
Sbjct: 282 NDNLEEARKLFDESPIRDVFTWTSMLSGYVQNG 314
>ref|XP_011627682.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142 [Amborella trichopoda]
Length = 604
Score = 43.1 bits (100), Expect(2) = 2e-08
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -2
Query: 283 VDLARELFDEMPLKNIVSWTTMISGYT*NRLA 188
+D A LF EMP KN+VSWT+M++G+T N L+
Sbjct: 182 IDSATNLFHEMPEKNVVSWTSMVAGFTQNGLS 213
Score = 42.0 bits (97), Expect(2) = 2e-08
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D +LFD MPVRDVSS NALI+GYM+ G
Sbjct: 153 DATKLFDIMPVRDVSSWNALINGYMKCG 180
>ref|XP_009769078.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Nicotiana sylvestris] gi|698550736|ref|XP_009769079.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g02750 [Nicotiana sylvestris]
Length = 774
Score = 48.5 bits (114), Expect(2) = 3e-08
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 283 VDLARELFDEMPLKNIVSWTTMISGYT*NRLAVNV-GFFCCLLCRALY*W 137
+DLARE F+ MP KN+ SW TMI+GY N V+ F C+ CR W
Sbjct: 321 MDLAREFFEAMPCKNVSSWNTMITGYAQNGDIVSARSLFHCMPCRDCISW 370
Score = 36.2 bits (82), Expect(2) = 3e-08
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = -1
Query: 386 NEVRHDRRRLFDEMPVRDVSSRNALISGYMRDG 288
N+ + R+LFDE P++DV + +L+SGY+++G
Sbjct: 256 NDNLEEARKLFDESPIKDVFTWTSLLSGYVQNG 288
>gb|KVI11029.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 640
Score = 42.7 bits (99), Expect(2) = 3e-08
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = -2
Query: 283 VDLARELFDEMPLKNIVSWTTMISGYT*NRLA 188
V A +LF M KNIVSWTTMISGYT N LA
Sbjct: 214 VRAAEDLFSRMLNKNIVSWTTMISGYTQNGLA 245
Score = 42.0 bits (97), Expect(2) = 3e-08
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = -1
Query: 371 DRRRLFDEMPVRDVSSRNALISGYMRDG 288
D R+LFDEMP RD++S N+LI+G+M++G
Sbjct: 185 DARKLFDEMPQRDIASWNSLIAGHMKNG 212