BLASTX nr result

ID: Rehmannia28_contig00027563 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00027563
         (394 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP09502.1| unnamed protein product [Coffea canephora]             64   1e-09
gb|KNA19251.1| hypothetical protein SOVF_063250 [Spinacia oleracea]    60   3e-08
ref|XP_008232581.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...    55   2e-06
ref|XP_007219790.1| hypothetical protein PRUPE_ppa026500mg [Prun...    55   3e-06

>emb|CDP09502.1| unnamed protein product [Coffea canephora]
          Length = 286

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
 Frame = +3

Query: 57  RSNHHLGFPHKLEFLVRST*KGETE--RDNLIRKIKMAEYENLRMRTIEENKRKMEKLKL 230
           +S +     H++E   RS+   E E   +N+ +K K+ EYE  RM+ IEEN+ +ME L L
Sbjct: 3   KSKNSYSISHEIESAQRSSSSEEVEVPENNVAQKKKITEYERQRMKRIEENRARMEALGL 62

Query: 231 KPLAYEVIGLMKGTKKQKVNNTMKSKQVFENDDEYRPEEGDHLEQSTGEDNIE 389
           K +A   +G +  + K+ V+   K K + ++D+EYRP + D       ED  E
Sbjct: 63  KKMANSFVGSLTKSAKEMVDKKGKRK-MDDDDEEYRPSDEDDDTNVDDEDYSE 114


>gb|KNA19251.1| hypothetical protein SOVF_063250 [Spinacia oleracea]
          Length = 236

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = +3

Query: 159 MAEYENLRMRTIEENKRKMEKLKLKPLAYEVIGLMKGTKKQKVNNTMKSKQVFENDDEYR 338
           MA+YE LR   IEEN+ +M+ L +  +AY++   MKG+K+     T KSK+V ++ DEY 
Sbjct: 1   MADYEKLRQAMIEENRIRMKDLGVTSMAYQMKKSMKGSKQ-----TKKSKKVTKDTDEYT 55

Query: 339 PEEGDHLEQSTGEDNIE 389
           P+E   L  S+ ED  E
Sbjct: 56  PDEEGELNHSSEEDENE 72


>ref|XP_008232581.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Prunus mume]
          Length = 294

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 28/75 (37%), Positives = 44/75 (58%)
 Frame = +3

Query: 159 MAEYENLRMRTIEENKRKMEKLKLKPLAYEVIGLMKGTKKQKVNNTMKSKQVFENDDEYR 338
           ++EYE  R+  I EN+ +ME L L  +A  V+G  +  K++         +VFE+D+EYR
Sbjct: 40  VSEYEKQRLSRIAENRARMEALGLPKIASSVMGSGQNGKRKNKKVQKGKAKVFEDDEEYR 99

Query: 339 PEEGDHLEQSTGEDN 383
           PEE +    S+ ED+
Sbjct: 100 PEEEESCSYSSQEDD 114


>ref|XP_007219790.1| hypothetical protein PRUPE_ppa026500mg [Prunus persica]
           gi|462416252|gb|EMJ20989.1| hypothetical protein
           PRUPE_ppa026500mg [Prunus persica]
          Length = 305

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 28/77 (36%), Positives = 45/77 (58%)
 Frame = +3

Query: 159 MAEYENLRMRTIEENKRKMEKLKLKPLAYEVIGLMKGTKKQKVNNTMKSKQVFENDDEYR 338
           ++EYE  R+  I EN+ +ME L L  +A  V+G  +  K++         +VFE+D+EYR
Sbjct: 40  VSEYEKQRLSRIAENRERMEALGLPKIASSVMGSGQNGKRKNKKVQKGKAKVFEDDEEYR 99

Query: 339 PEEGDHLEQSTGEDNIE 389
           PEE +    S+ E+ +E
Sbjct: 100 PEEEESCSYSSQEEAME 116


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