BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00027451
         (2164 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090595.1| PREDICTED: pentatricopeptide repeat-containi...   832   0.0  
ref|XP_012845185.1| PREDICTED: pentatricopeptide repeat-containi...   786   0.0  
emb|CDP01388.1| unnamed protein product [Coffea canephora]            709   0.0  
ref|XP_009762907.1| PREDICTED: pentatricopeptide repeat-containi...   700   0.0  
ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containi...   696   0.0  
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   689   0.0  
ref|XP_015071445.1| PREDICTED: pentatricopeptide repeat-containi...   685   0.0  
ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi...   683   0.0  
ref|XP_006354699.2| PREDICTED: pentatricopeptide repeat-containi...   682   0.0  
ref|XP_015867273.1| PREDICTED: pentatricopeptide repeat-containi...   679   0.0  
gb|KVI09847.1| Pentatricopeptide repeat-containing protein [Cyna...   672   0.0  
ref|XP_002532046.1| PREDICTED: pentatricopeptide repeat-containi...   668   0.0  
ref|XP_008364127.1| PREDICTED: pentatricopeptide repeat-containi...   667   0.0  
ref|XP_010245873.1| PREDICTED: pentatricopeptide repeat-containi...   666   0.0  
ref|XP_009345820.1| PREDICTED: pentatricopeptide repeat-containi...   665   0.0  
ref|XP_010681106.1| PREDICTED: pentatricopeptide repeat-containi...   664   0.0  
ref|XP_011021906.1| PREDICTED: pentatricopeptide repeat-containi...   662   0.0  
ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi...   663   0.0  
ref|XP_008227123.1| PREDICTED: pentatricopeptide repeat-containi...   660   0.0  
gb|KJB71228.1| hypothetical protein B456_011G111900 [Gossypium r...   659   0.0  

>ref|XP_011090595.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Sesamum indicum]
          Length = 492

 Score =  832 bits (2149), Expect = 0.0
 Identities = 416/493 (84%), Positives = 441/493 (89%)
 Frame = +1

Query: 118  MTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPGPKKTH 297
            MTS SLPFT SS QLSPT K T I TP  AFTH+P  PS IRMC  S +P++ PGPK+ +
Sbjct: 1    MTSSSLPFTCSSFQLSPTPKSTRIRTPTPAFTHNPFPPSAIRMCA-STQPKKIPGPKRIN 59

Query: 298  PKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQC 477
             KR      EAEDLVRL++RNFTDKQPLVNTLNKYVK VRTEHCFLLFEELG+SDKWLQC
Sbjct: 60   KKRGSSSSSEAEDLVRLLMRNFTDKQPLVNTLNKYVKLVRTEHCFLLFEELGKSDKWLQC 119

Query: 478  LEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALIT 657
            LE+FRWMQKQ+WYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALIT
Sbjct: 120  LEMFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALIT 179

Query: 658  AHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDE 837
            AHLHSRDKSKALAKAL YFEKMKGMERCKPSIVTYNILLRAFAQA+NVDQVNALFKDLDE
Sbjct: 180  AHLHSRDKSKALAKALWYFEKMKGMERCKPSIVTYNILLRAFAQARNVDQVNALFKDLDE 239

Query: 838  SIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDK 1017
            SIV+PDIYTFNGVMDAYGK+GMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDK
Sbjct: 240  SIVSPDIYTFNGVMDAYGKLGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDK 299

Query: 1018 MEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYECLIS 1197
            MEQVFKSLLRSKEKPTLPTFNSMITNYGKAR REKADLVFQK+T+MGYKPSF+TYECLI 
Sbjct: 300  MEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREKADLVFQKMTEMGYKPSFITYECLIM 359

Query: 1198 MYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTGMFS 1377
            MYGYCDC+ KAR+IFDQM ESEKEKKVSTLNAMLDVYC N LPMEADMLFES R + MF+
Sbjct: 360  MYGYCDCISKAREIFDQMAESEKEKKVSTLNAMLDVYCRNALPMEADMLFESARRSRMFA 419

Query: 1378 VDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFGXXXXXXXXXXX 1557
            VDSSTYKLLYKAY KA+MKELIEKLL YMDKDGI+PNKRFFLDALGA G           
Sbjct: 420  VDSSTYKLLYKAYTKANMKELIEKLLMYMDKDGIVPNKRFFLDALGALGSSPPGKKSTRK 479

Query: 1558 XDGLSQEAATGKA 1596
             DGL QEAAT ++
Sbjct: 480  SDGLHQEAATAQS 492


>ref|XP_012845185.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Erythranthe guttata]
            gi|604319904|gb|EYU31068.1| hypothetical protein
            MIMGU_mgv1a024034mg [Erythranthe guttata]
          Length = 496

 Score =  786 bits (2030), Expect = 0.0
 Identities = 389/494 (78%), Positives = 430/494 (87%), Gaps = 1/494 (0%)
 Frame = +1

Query: 118  MTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCG-VSARPQRKPGPKKT 294
            MTS + PFTSSSL L  T KFT+ISTP  A T HP  PS IRMC  VSARP+R PGP+KT
Sbjct: 1    MTSATPPFTSSSLHLPHTPKFTYISTPFRALTRHPCPPSTIRMCSWVSARPERNPGPRKT 60

Query: 295  HPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQ 474
            H +       EAEDLV+LI+RNF+DKQPLVNTL+KYVKFVRT+HCFLLFEELG+++KWLQ
Sbjct: 61   HKRSTSSPSSEAEDLVKLIMRNFSDKQPLVNTLDKYVKFVRTDHCFLLFEELGKTEKWLQ 120

Query: 475  CLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALI 654
            CLEVFRWMQKQ+WYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYN+LI
Sbjct: 121  CLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLI 180

Query: 655  TAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLD 834
            TAHLHSRDKSKALAK+L YFEKMK MERCKPSIVTYNILLRAFAQAKNVDQVN LFKDL+
Sbjct: 181  TAHLHSRDKSKALAKSLGYFEKMKSMERCKPSIVTYNILLRAFAQAKNVDQVNTLFKDLE 240

Query: 835  ESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 1014
            ESIVTPDI+TFNGVMDAYGK GMIREME VL++MKSNQIKPD ITFN LIDAYG+KQEF+
Sbjct: 241  ESIVTPDIFTFNGVMDAYGKNGMIREMEFVLAKMKSNQIKPDTITFNSLIDAYGKKQEFE 300

Query: 1015 KMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYECLI 1194
            KMEQVF SLLRSKEKPTLPTFNSMITNYGKAR REK DLVF+++T+MGYKPSFVTYECLI
Sbjct: 301  KMEQVFTSLLRSKEKPTLPTFNSMITNYGKARLREKGDLVFKRMTEMGYKPSFVTYECLI 360

Query: 1195 SMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTGMF 1374
            +MYGYCD V +AR++FD+M +SE EKK+STLNAMLD YCMNGLPMEAD LF++ R++ MF
Sbjct: 361  TMYGYCDRVSRAREVFDEMVDSENEKKISTLNAMLDAYCMNGLPMEADALFDNARSSRMF 420

Query: 1375 SVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFGXXXXXXXXXX 1554
             VDSSTYKLLYKAY KADMKEL+ KL+  MDKDGIIPNKRFFLDALGA G          
Sbjct: 421  RVDSSTYKLLYKAYTKADMKELLGKLVVCMDKDGIIPNKRFFLDALGAIGSFHDGKKSTN 480

Query: 1555 XXDGLSQEAATGKA 1596
              DG  Q+AAT  A
Sbjct: 481  RKDGSRQKAATETA 494


>emb|CDP01388.1| unnamed protein product [Coffea canephora]
          Length = 598

 Score =  709 bits (1830), Expect = 0.0
 Identities = 350/427 (81%), Positives = 388/427 (90%), Gaps = 1/427 (0%)
 Frame = +1

Query: 247  CGVSARPQRKPGPKKTHPKRXXXXXXEAEDLVRLIVRNFTDK-QPLVNTLNKYVKFVRTE 423
            C +S  P R P  K+T  KR      EAE+LV L++RNF +K QPLV TLNKYVK VRTE
Sbjct: 116  CIISNVPTR-PKKKRTKTKRAIS---EAEELVGLLMRNFDEKKQPLVATLNKYVKLVRTE 171

Query: 424  HCFLLFEELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSE 603
            HCFLLFEELG++DKWLQCLEVFRWMQKQ+WYIADNGVYSKLISVMGKKGQTRMAMWLFSE
Sbjct: 172  HCFLLFEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSE 231

Query: 604  MRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAF 783
            MRNSGCKPDTSVYNALITAHLHSRDK+KALAKAL YF KMKGMERC P++VTYNILLRAF
Sbjct: 232  MRNSGCKPDTSVYNALITAHLHSRDKAKALAKALGYFGKMKGMERCPPNVVTYNILLRAF 291

Query: 784  AQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDI 963
            AQA++VDQVNALFKDLDESIVTPDI+TFNGVMDAYGK GMIREME VLSRMKSNQ++PD+
Sbjct: 292  AQARDVDQVNALFKDLDESIVTPDIFTFNGVMDAYGKNGMIREMESVLSRMKSNQLRPDL 351

Query: 964  ITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQK 1143
            ITFNLLID+YGRKQEF+KMEQVFKSLL SKEKPTLPTFNSMITNYGKAR REKA+L+FQK
Sbjct: 352  ITFNLLIDSYGRKQEFEKMEQVFKSLLHSKEKPTLPTFNSMITNYGKARLREKAELIFQK 411

Query: 1144 ITDMGYKPSFVTYECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGL 1323
            ITDMGY P+F+TYEC+I MYGYCDCV+KAR+IFD++ ES KEKKVSTLNAMLDVYCMNGL
Sbjct: 412  ITDMGYSPNFITYECVIMMYGYCDCVFKAREIFDKVRESGKEKKVSTLNAMLDVYCMNGL 471

Query: 1324 PMEADMLFESVRTTGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFL 1503
            P+EAD LFES+  +  FS+D+STYKLLYKAY KA+MKEL++KL+ YMDKDGIIPNK FFL
Sbjct: 472  PLEADTLFESIHASRAFSIDASTYKLLYKAYTKANMKELVKKLMLYMDKDGIIPNKSFFL 531

Query: 1504 DALGAFG 1524
            DALGAFG
Sbjct: 532  DALGAFG 538


>ref|XP_009762907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Nicotiana sylvestris]
          Length = 488

 Score =  700 bits (1806), Expect = 0.0
 Identities = 350/492 (71%), Positives = 407/492 (82%)
 Frame = +1

Query: 103  LKFTKMTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPG 282
            L F+   S+  P ++++       K TH   P   FT+       IR   VS RP RK G
Sbjct: 3    LPFSCSGSVQFPCSTTTTPTFQQPKLTH--NPWLNFTYKRPVFYVIRC--VSTRPGRKSG 58

Query: 283  PKKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSD 462
                          EA++LV L+++NF+DK+PLV+TLNKYVKFVRTEHCFLLFEELG++D
Sbjct: 59   TMSR------IGSSEAQELVTLLMKNFSDKKPLVSTLNKYVKFVRTEHCFLLFEELGKTD 112

Query: 463  KWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVY 642
             WLQCLEVFRWMQKQ+WYIADNGVYSKLISVMGKKGQ RMAMWLFSEMRNSGC+PDTSVY
Sbjct: 113  NWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 172

Query: 643  NALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALF 822
            NA+I+AHLHSRDKSKALAKA+ YFEKMKGMERC PSIVTYNILLRAFAQAKNV+QV+AL 
Sbjct: 173  NAVISAHLHSRDKSKALAKAMGYFEKMKGMERCSPSIVTYNILLRAFAQAKNVEQVDALL 232

Query: 823  KDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRK 1002
            KDL++SIVTPDI+TFNG+MDAYGK GMI+EME VLSRMKSN++KPDIITFN+LID+YG+K
Sbjct: 233  KDLEDSIVTPDIFTFNGLMDAYGKNGMIKEMEHVLSRMKSNELKPDIITFNILIDSYGKK 292

Query: 1003 QEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTY 1182
            QEF KMEQVFKSLLRSKEKPT+PTFNSMITNYGKAR REKADLV +K+TD+GY+PS++TY
Sbjct: 293  QEFQKMEQVFKSLLRSKEKPTIPTFNSMITNYGKARLREKADLVLEKMTDLGYRPSYITY 352

Query: 1183 ECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRT 1362
            ECLI MYG+CDCV KAR++FD++ ESEKEKKVSTLN+MLD YCMNGLP+EAD LFES+ +
Sbjct: 353  ECLIMMYGHCDCVAKARELFDRVVESEKEKKVSTLNSMLDTYCMNGLPVEADALFESIHS 412

Query: 1363 TGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFGXXXXXX 1542
               F +DSSTYKLLYKAY KADMKEL++KLL  MDKDGIIPNK+FFLDALGAFG      
Sbjct: 413  AKAFPIDSSTYKLLYKAYTKADMKELVQKLLTCMDKDGIIPNKKFFLDALGAFGTGPMSQ 472

Query: 1543 XXXXXXDGLSQE 1578
                   GL+++
Sbjct: 473  KAAGDNKGLNKQ 484


>ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Nicotiana tomentosiformis]
          Length = 488

 Score =  696 bits (1797), Expect = 0.0
 Identities = 347/490 (70%), Positives = 403/490 (82%), Gaps = 6/490 (1%)
 Frame = +1

Query: 127  ISLPFTSSSLQLSPTLKFTHISTPIHAFTHHP------SSPSGIRMCGVSARPQRKPGPK 288
            ++LPF+ S     P+   T  +      TH+P        P    +  VS RP RK G  
Sbjct: 1    MTLPFSYSGSVQFPSSTTTTPTFQQPRLTHNPWLNFTYKRPVFYLIRCVSTRPGRKSGTT 60

Query: 289  KTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKW 468
             T          E ++LV L++RNF+DK+PLV+TLNKYVKFVRTEHCFLLFEELG++D W
Sbjct: 61   STRGSS------EEQELVTLLMRNFSDKKPLVSTLNKYVKFVRTEHCFLLFEELGKTDNW 114

Query: 469  LQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNA 648
            LQCLEVFRWMQKQ+WYIADNGVYSKLISVMGKKGQ RMAMWLFSEMRNSGC+PDTSVYNA
Sbjct: 115  LQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNA 174

Query: 649  LITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKD 828
            +I+AHLHSRDKSKALAKA+ YFEKMKGMERC PSIVTYNILLRAFAQAKNV+QV+AL KD
Sbjct: 175  VISAHLHSRDKSKALAKAMGYFEKMKGMERCNPSIVTYNILLRAFAQAKNVEQVDALMKD 234

Query: 829  LDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQE 1008
            L+ESIVTPDI+TFNG+MDAYGK GMI+EME VLSRMKSN++KPDIITFN+LID+YG+KQE
Sbjct: 235  LEESIVTPDIFTFNGLMDAYGKNGMIKEMEHVLSRMKSNELKPDIITFNILIDSYGKKQE 294

Query: 1009 FDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYEC 1188
            F KMEQVFKSLLRSKEKPT+PTFNSMITNYGKAR REKA+LV +K+ D+GY+PS++TYEC
Sbjct: 295  FQKMEQVFKSLLRSKEKPTIPTFNSMITNYGKARLREKAELVLEKLIDLGYRPSYITYEC 354

Query: 1189 LISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTG 1368
            LI MYG+CDCV KAR++FD++ ESEKEKKVSTLN+MLD YCMNGLP+EA  LFES+ +  
Sbjct: 355  LIMMYGHCDCVAKARELFDRVVESEKEKKVSTLNSMLDTYCMNGLPVEAHALFESIHSAK 414

Query: 1369 MFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFGXXXXXXXX 1548
             F +DSSTYKLLYKAY KADMKEL++KLL  MDKDGIIPNK+FFLDALGAFG        
Sbjct: 415  TFPIDSSTYKLLYKAYTKADMKELVQKLLTCMDKDGIIPNKKFFLDALGAFGTGPLSQKA 474

Query: 1549 XXXXDGLSQE 1578
                 GL+++
Sbjct: 475  AGDNKGLNRQ 484


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Vitis vinifera]
            gi|296082481|emb|CBI21486.3| unnamed protein product
            [Vitis vinifera]
          Length = 489

 Score =  689 bits (1778), Expect = 0.0
 Identities = 350/484 (72%), Positives = 400/484 (82%), Gaps = 2/484 (0%)
 Frame = +1

Query: 148  SSLQLSPTLKFTHISTPIHAFT--HHPSSPSGIRMCGVSARPQRKPGPKKTHPKRXXXXX 321
            SS  LSPT  FT  S+  +  T  H P  PS   +  VS RP+RKPGPK           
Sbjct: 16   SSSTLSPT--FTLPSSRFYKPTRLHLPPRPSTTVVSCVSTRPRRKPGPKPDKS------- 66

Query: 322  XEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQCLEVFRWMQ 501
             E E+LVR++++NF  ++PL++TLNKYVK +RTEHCF LFEELG++DKWLQCLEVFRWMQ
Sbjct: 67   -EVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWMQ 125

Query: 502  KQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDK 681
            KQ+WYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNALITAHLHSRDK
Sbjct: 126  KQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDK 185

Query: 682  SKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIY 861
            SKAL KAL YF+KMKGMERCKP+IVTYNILLRAFAQA+NV+Q NALFK+L+ESIV+PDI+
Sbjct: 186  SKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIF 245

Query: 862  TFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSL 1041
            TFNGVMDAYGK GMI+EME VLSRMKSNQ KPDIITFN+LID+YGR+QEFDKMEQVFKSL
Sbjct: 246  TFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSL 305

Query: 1042 LRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYECLISMYGYCDCV 1221
            LRSKEKPTLPTFNSMITNYGKAR +EKA+ VF+K+TDMGY P+F+TYE LI MYG+CDC+
Sbjct: 306  LRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCI 365

Query: 1222 WKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTGMFSVDSSTYKL 1401
             +AR+IFD+M  S+KE KVSTLNAML+VYCMNGLPMEAD+L E  R    F   SSTYKL
Sbjct: 366  SRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFP-GSSTYKL 424

Query: 1402 LYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFGXXXXXXXXXXXXDGLSQEA 1581
            LYKAY KAD KEL+EKLLK MD DGI+PNKRFFL+ALGAFG             GL++  
Sbjct: 425  LYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRPR 484

Query: 1582 ATGK 1593
             + K
Sbjct: 485  NSAK 488


>ref|XP_015071445.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Solanum pennellii]
          Length = 478

 Score =  685 bits (1768), Expect = 0.0
 Identities = 339/491 (69%), Positives = 401/491 (81%)
 Frame = +1

Query: 103  LKFTKMTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPG 282
            L+F+  +S+ LP  SS+   +P L       P+++     S+  G R  G  +       
Sbjct: 4    LQFSSSSSVQLP--SSTTTTTPWLNLQK-KRPVYSIVRCVSTRPGGRKSGYGSSSS---- 56

Query: 283  PKKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSD 462
                          EA++LV L++RNF+DK+PLV+TL+KYVK VRTEHCFLLFE+LG++D
Sbjct: 57   --------------EAQELVTLVMRNFSDKKPLVSTLDKYVKLVRTEHCFLLFEQLGKTD 102

Query: 463  KWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVY 642
             WLQCLEVFRWMQKQ+WYIADNGVYSKLISVMGKKGQ RMAMWLFSEMRNSGC+PDTSVY
Sbjct: 103  NWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 162

Query: 643  NALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALF 822
            NA+I+AHLHSRDKSKAL KA+ YFEKMKGMERC PSIVTYNILLRAFAQAKNV+QV+AL 
Sbjct: 163  NAVISAHLHSRDKSKALTKAMGYFEKMKGMERCSPSIVTYNILLRAFAQAKNVEQVDALL 222

Query: 823  KDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRK 1002
            KDLDESIVTPDI+TFNG+MDAYGK GMI EME VLSRMKSN++KPDIITFN+LID+YG+K
Sbjct: 223  KDLDESIVTPDIFTFNGLMDAYGKNGMINEMEHVLSRMKSNKLKPDIITFNILIDSYGKK 282

Query: 1003 QEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTY 1182
            Q+F KMEQVFKSLL+SKEKPT+PTFNSMITNYGKAR REK++LV +K+ D+GYKPS++TY
Sbjct: 283  QDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREKSELVLEKMIDLGYKPSYITY 342

Query: 1183 ECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRT 1362
            ECLI MYG+CDCV KAR++FD++ ESEKEKK STLN+MLD YCMNGLPMEA +LFES+ +
Sbjct: 343  ECLIVMYGHCDCVSKARELFDRVMESEKEKKASTLNSMLDAYCMNGLPMEAHLLFESIHS 402

Query: 1363 TGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFGXXXXXX 1542
               F +DSSTYKLLYKAY KADMKEL++KLL YMD+DGIIPNK+FFLD+LGAFG      
Sbjct: 403  AKAFPIDSSTYKLLYKAYTKADMKELVQKLLTYMDEDGIIPNKKFFLDSLGAFGSAPTNR 462

Query: 1543 XXXXXXDGLSQ 1575
                   GLS+
Sbjct: 463  RAVGDNKGLSK 473


>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Solanum lycopersicum]
            gi|723692221|ref|XP_010319770.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Solanum lycopersicum]
          Length = 478

 Score =  683 bits (1762), Expect = 0.0
 Identities = 339/491 (69%), Positives = 400/491 (81%)
 Frame = +1

Query: 103  LKFTKMTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPG 282
            L+F+  +S+ LP  SS+   +P L       P+++     S+  G R  G  +       
Sbjct: 4    LQFSSSSSVQLP--SSTTTTTPWLNLQK-KRPLYSIVRCVSTRPGGRKSGYGSSSS---- 56

Query: 283  PKKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSD 462
                          EA++LV L++RNF+DK+PLV+TL+KYVK VRTEHCFLLFE+LG++D
Sbjct: 57   --------------EAQELVTLVMRNFSDKKPLVSTLDKYVKLVRTEHCFLLFEQLGKTD 102

Query: 463  KWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVY 642
             WLQCLEVFRWMQKQ+WYIADNGVYSKLISVMGKKGQ RMAMWLFSEMRNSGC+PDTSVY
Sbjct: 103  NWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 162

Query: 643  NALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALF 822
            NA+I+AHLHSRDKSKAL KA+ YFEKMK MERC PSIVTYNILLRAFAQAKNV+QV+AL 
Sbjct: 163  NAVISAHLHSRDKSKALTKAMGYFEKMKEMERCSPSIVTYNILLRAFAQAKNVEQVDALL 222

Query: 823  KDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRK 1002
            KDLDESIVTPDI+TFNG+MDAYGK GMI EME VLSRMKSN++KPDIITFN+LID+YG+K
Sbjct: 223  KDLDESIVTPDIFTFNGLMDAYGKNGMINEMEHVLSRMKSNKLKPDIITFNILIDSYGKK 282

Query: 1003 QEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTY 1182
            Q+F KMEQVFKSLL+SKEKPT+PTFNSMITNYGKAR REK++LV +K+ D+GYKPS++TY
Sbjct: 283  QDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREKSELVLEKMIDLGYKPSYITY 342

Query: 1183 ECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRT 1362
            ECLI MYG+CDCV KAR++FD++ ESEKEKK STLN+MLD YCMNGLPMEA +LFES+ +
Sbjct: 343  ECLIVMYGHCDCVSKARELFDRVMESEKEKKASTLNSMLDAYCMNGLPMEAHLLFESIHS 402

Query: 1363 TGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFGXXXXXX 1542
               F +DSSTYKLLYKAY KADMKEL++KLL YMD+DGIIPNK+FFLDALGAFG      
Sbjct: 403  AKAFPIDSSTYKLLYKAYTKADMKELVQKLLTYMDEDGIIPNKKFFLDALGAFGSAPTNR 462

Query: 1543 XXXXXXDGLSQ 1575
                   GLS+
Sbjct: 463  RAVGDNKGLSK 473


>ref|XP_006354699.2| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Solanum tuberosum]
            gi|971563349|ref|XP_006354698.2| PREDICTED:
            pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Solanum tuberosum]
            gi|971563351|ref|XP_015167479.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Solanum tuberosum]
          Length = 477

 Score =  682 bits (1761), Expect = 0.0
 Identities = 337/491 (68%), Positives = 401/491 (81%)
 Frame = +1

Query: 103  LKFTKMTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPG 282
            L+F+  +S+ LP +++++   P L       P+ +  H  S+  G R  G  +       
Sbjct: 4    LQFSSSSSVQLPSSTTTM---PWLNLQK-KRPVFSIIHCVSTRPGGRKSGYGSSSS---- 55

Query: 283  PKKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSD 462
                          EA++LV L++RNF+DK+PLV+TL+KYVK VRTEHCFLLFE+LG++D
Sbjct: 56   --------------EAQELVTLVMRNFSDKKPLVSTLDKYVKLVRTEHCFLLFEQLGKTD 101

Query: 463  KWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVY 642
             WLQCLEVFRWMQKQ+WYIADNGVYSKLISVMGKKGQ RMAMWLFSEMRNSGC+PDTSVY
Sbjct: 102  NWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 161

Query: 643  NALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALF 822
            NA+I+AHLHSRDKSKAL KA+ YFEKMKGMERC PSIVTYNILLRAFAQAKNV+QV+AL 
Sbjct: 162  NAVISAHLHSRDKSKALTKAMGYFEKMKGMERCSPSIVTYNILLRAFAQAKNVEQVDALL 221

Query: 823  KDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRK 1002
            KDLDESIVTPDI+TFNG+MDAYGK GMI EME +LSRMKSNQ+KPDIITFN+LID+YG+K
Sbjct: 222  KDLDESIVTPDIFTFNGLMDAYGKNGMINEMEHILSRMKSNQLKPDIITFNILIDSYGKK 281

Query: 1003 QEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTY 1182
            Q+F KMEQVFKSLL+SKEKPT+PTFNSMITNYGKAR REK++LV +K+ D+GYKPS++TY
Sbjct: 282  QDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREKSELVLEKMIDLGYKPSYITY 341

Query: 1183 ECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRT 1362
            ECLI MYG+CDCV KAR++FD++ ESE EKK STLN+MLD YCMNGLPMEA +LFES+ +
Sbjct: 342  ECLIVMYGHCDCVAKARELFDRVIESETEKKASTLNSMLDAYCMNGLPMEAHLLFESIHS 401

Query: 1363 TGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFGXXXXXX 1542
              +F +DSSTYKLLYKAY KADMKEL++KLL  MD+DGIIPNK+FFLDALGAFG      
Sbjct: 402  AKVFPIDSSTYKLLYKAYTKADMKELVQKLLTCMDEDGIIPNKKFFLDALGAFGSAPTNR 461

Query: 1543 XXXXXXDGLSQ 1575
                   GLS+
Sbjct: 462  REVGDNKGLSK 472


>ref|XP_015867273.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Ziziphus jujuba]
          Length = 487

 Score =  679 bits (1752), Expect = 0.0
 Identities = 344/471 (73%), Positives = 395/471 (83%), Gaps = 8/471 (1%)
 Frame = +1

Query: 133  LPFTSSSLQLSP-TLKFTHISTPIHAFTHHPSSPSGI-------RMCGVSARPQRKPGPK 288
            +P + SS  L P T  FT  ST  + F   P  P+ +       R+  VS RP+RK   K
Sbjct: 1    MPLSLSSHSLHPSTFLFTRPSTQNYNFAK-PWLPNSLLLERTITRISCVSTRPKRKSASK 59

Query: 289  KTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKW 468
                        EAE+LVRL++R+F+DK+PL+ TLNKYVK VRTEHCFLLFEELG+SDKW
Sbjct: 60   --------IESSEAEELVRLLMRSFSDKEPLLKTLNKYVKIVRTEHCFLLFEELGKSDKW 111

Query: 469  LQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNA 648
            LQCLEVFRWMQKQ+WYIADNG+YSKLISVMGK GQTRMAMWLFSEMRNSGC+PDTSVYNA
Sbjct: 112  LQCLEVFRWMQKQRWYIADNGIYSKLISVMGKNGQTRMAMWLFSEMRNSGCRPDTSVYNA 171

Query: 649  LITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKD 828
            L+TAHLHS+DK+KAL KAL YFEKMKGMERCKP++VTYNILLRA+AQA+NV+QVNAL KD
Sbjct: 172  LMTAHLHSKDKTKALCKALGYFEKMKGMERCKPNVVTYNILLRAYAQARNVEQVNALLKD 231

Query: 829  LDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQE 1008
            LDESIV+PDIYT+NGVMDAYGK GMIREME VLSRMKSNQ KPDIITFNLLID+YG++QE
Sbjct: 232  LDESIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKRQE 291

Query: 1009 FDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYEC 1188
            FDKMEQV+KSLLRSKE+PTLPTFNSMI NYGKAR +EKA+ VF+K+TDMGY PSF+TYE 
Sbjct: 292  FDKMEQVYKSLLRSKERPTLPTFNSMIINYGKARLQEKAENVFKKMTDMGYAPSFITYES 351

Query: 1189 LISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTG 1368
            LI MYG+CDCV KA+DIFD+  ES K+ KVSTLNAMLDVYCMNGLPMEA+ LFES  + G
Sbjct: 352  LIMMYGFCDCVSKAQDIFDRWVESGKQLKVSTLNAMLDVYCMNGLPMEANKLFESANSIG 411

Query: 1369 MFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAF 1521
            +   DSSTYKLLYKAY KA+MKEL+ KLLK+M +DGI+PNK FFL+ALG F
Sbjct: 412  VIP-DSSTYKLLYKAYTKANMKELLGKLLKHMHRDGIVPNKWFFLEALGTF 461


>gb|KVI09847.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus var.
            scolymus]
          Length = 565

 Score =  672 bits (1735), Expect = 0.0
 Identities = 337/470 (71%), Positives = 389/470 (82%), Gaps = 4/470 (0%)
 Frame = +1

Query: 127  ISLPFTSSSLQLSPT----LKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPGPKKT 294
            +S  F++ SL   P     +KFTHIS+    F          R   +S    R     K+
Sbjct: 1    MSANFSNGSLHFPPIPATHMKFTHISSLNFNFCRQYPCKKPTRYAIISGSTIRSKRNSKS 60

Query: 295  HPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQ 474
                      EA++LVR +++NF   +PL++TLNKYVK VRTEHCFLLFEELG+SDKWLQ
Sbjct: 61   EENA------EAQELVRTLLKNFNYDKPLLSTLNKYVKLVRTEHCFLLFEELGKSDKWLQ 114

Query: 475  CLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALI 654
            CLEVFRWMQKQ+WY+ADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNALI
Sbjct: 115  CLEVFRWMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALI 174

Query: 655  TAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLD 834
            TAHLHS+DK KAL+KAL YF+KMKG ERCKPSIVTYNILLRAFAQA+NV QV ALFKDL+
Sbjct: 175  TAHLHSKDKPKALSKALGYFDKMKGTERCKPSIVTYNILLRAFAQARNVAQVEALFKDLE 234

Query: 835  ESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 1014
            ESI TPDI+TFNGVMDAYGK GMI EME VL+RMKS QIKPDII++NLLID+YGRKQEF+
Sbjct: 235  ESIATPDIFTFNGVMDAYGKNGMIGEMEGVLARMKSKQIKPDIISYNLLIDSYGRKQEFE 294

Query: 1015 KMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYECLI 1194
            KMEQVFKSLLRSKE+PTL TFNSMITNYGKAR R KADLVFQKITDMGY P+F+TYEC+I
Sbjct: 295  KMEQVFKSLLRSKERPTLSTFNSMITNYGKARLRGKADLVFQKITDMGYTPNFITYECMI 354

Query: 1195 SMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTGMF 1374
             MYG CDCV +AR+I+D+M ESEK  KVSTLN ML+VYC+NGL MEAD LFE+  ++ MF
Sbjct: 355  MMYGCCDCVSRAREIYDKMIESEKIVKVSTLNVMLNVYCLNGLTMEADRLFETACSSEMF 414

Query: 1375 SVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFG 1524
             VDSSTYKLLYK+Y KA+MKEL++KL+K+MD+DGI+PNK+FFLDALGA G
Sbjct: 415  RVDSSTYKLLYKSYTKANMKELLQKLMKHMDRDGIVPNKKFFLDALGALG 464


>ref|XP_002532046.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Ricinus communis]
            gi|223528289|gb|EEF30336.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  668 bits (1724), Expect = 0.0
 Identities = 341/469 (72%), Positives = 393/469 (83%), Gaps = 6/469 (1%)
 Frame = +1

Query: 133  LPFTSSSLQLSP--TLKFTHISTPIH--AFTHHP-SSPSGIRMCGVSARPQRKPGPKKTH 297
            L  +  SLQLSP  +  FT+    IH    + HP  +     +  VS RP++K  P    
Sbjct: 3    LNLSPHSLQLSPLGSSNFTNNFPQIHNPTLSWHPCKNLRQTHITCVSTRPRKKRFPISEE 62

Query: 298  PKRXXXXXXEAEDLVRLIVRNFT-DKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQ 474
                     E EDLVR ++R+F+ DK PLV TL+KYV+ VRTEHCFLLFEELGR DKWLQ
Sbjct: 63   S--------ETEDLVRYVLRSFSSDKVPLVRTLDKYVRVVRTEHCFLLFEELGRRDKWLQ 114

Query: 475  CLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALI 654
            CLEVFRWMQKQ+WYIAD+GVYSKLISVMGKKGQTRMAMWLFSEMRNSGC+PD+SVYNALI
Sbjct: 115  CLEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALI 174

Query: 655  TAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLD 834
            TAHLHS+DK+KAL KAL YFEKMKGM+RC+P++VTYNILLRAFAQA+NV+QVNALFKDLD
Sbjct: 175  TAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLD 234

Query: 835  ESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 1014
            +SIV+PDIYT+NGVMDAYGK GMIREME VLSRMKSNQ KPDIITFNLLID+YG+KQ+FD
Sbjct: 235  QSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFD 294

Query: 1015 KMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYECLI 1194
            KMEQVFKSLL SKE+PTLPTFNSMITNYGKARQ+E A+ V QK+T M Y P+F+TYE LI
Sbjct: 295  KMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPNFITYESLI 354

Query: 1195 SMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTGMF 1374
             MYG+CD V KAR+IFD M ES KE KVSTLNAMLDVYC+NGLPMEAD+LF++ R  G+ 
Sbjct: 355  MMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLFDNARNVGLL 414

Query: 1375 SVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAF 1521
              DS+TYKLLYKAY KA+MK+L++KLLK+MD+DGIIPNKRFFLDALGAF
Sbjct: 415  P-DSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFFLDALGAF 462


>ref|XP_008364127.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Malus domestica]
          Length = 486

 Score =  667 bits (1721), Expect = 0.0
 Identities = 336/471 (71%), Positives = 393/471 (83%), Gaps = 6/471 (1%)
 Frame = +1

Query: 127  ISLPFTSSSLQLSPTLKFTHISTPIHAFTH----HP--SSPSGIRMCGVSARPQRKPGPK 288
            +SL  + +SLQ S T +FT  S+  ++FT     HP        R+  VS RP+R PGPK
Sbjct: 1    MSLTISPNSLQPS-TFQFTFHSSQNYSFTQPWLPHPLIRKRPRTRISCVSTRPKRNPGPK 59

Query: 289  KTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKW 468
               P        E  ++VR ++R+F+DK+PL+ TLNKYVK VRTEHCF+LFEELG++DKW
Sbjct: 60   TEDP--------EVREVVRTLMRSFSDKEPLLKTLNKYVKIVRTEHCFMLFEELGKTDKW 111

Query: 469  LQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNA 648
            LQCLEVFRWMQ+Q+WY+ADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNA
Sbjct: 112  LQCLEVFRWMQRQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNA 171

Query: 649  LITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKD 828
            LI+AHL+S+DK+KAL KAL YF KMKGMERC+PSIVTYNILLRAFAQ++NV++VNALFKD
Sbjct: 172  LISAHLNSKDKAKALDKALGYFNKMKGMERCQPSIVTYNILLRAFAQSRNVEKVNALFKD 231

Query: 829  LDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQE 1008
            LDES+ +PDIYT+NGVMDAYGK G IREME VLSRMKSNQ KPDIITFNLLID+YG+KQ+
Sbjct: 232  LDESVASPDIYTYNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQQ 291

Query: 1009 FDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYEC 1188
            FDKMEQVFKSLLRSKEKPTLPTFNSMI NYGKAR  EKA+ VF K+TDM Y PSF+TYE 
Sbjct: 292  FDKMEQVFKSLLRSKEKPTLPTFNSMIINYGKARLMEKAEHVFXKMTDMKYTPSFITYES 351

Query: 1189 LISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTG 1368
            LI MYG+CDCV KARD+F+++ +S +E KVSTLNAMLDVYCMNGLPMEAD LF S  + G
Sbjct: 352  LIMMYGFCDCVSKARDVFERLADSGRELKVSTLNAMLDVYCMNGLPMEADKLFVSANSIG 411

Query: 1369 MFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAF 1521
            +   + STYKLLYK Y K +MKEL+EKLLK M+ DGI+PNKRFFL+ALGAF
Sbjct: 412  V-RPNVSTYKLLYKYYTKGNMKELLEKLLKSMENDGIVPNKRFFLEALGAF 461


>ref|XP_010245873.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Nelumbo nucifera]
          Length = 491

 Score =  666 bits (1719), Expect = 0.0
 Identities = 337/482 (69%), Positives = 393/482 (81%), Gaps = 4/482 (0%)
 Frame = +1

Query: 91   TAIPLKFTKMTSISLPFTSSSL----QLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVS 258
            TA+ L+ + +T   L F  SS+    Q  P         PIH            R+  ++
Sbjct: 6    TALSLQLSSVTPFPLQFRESSISKLKQAYPCPPQRFSLKPIH------------RISCIA 53

Query: 259  ARPQRKPGPKKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLL 438
             RP+++   K            EA +LVR ++RNF+D++PLV+TLNKYVK VRTEHCFLL
Sbjct: 54   TRPKKRFASKSDKS--------EAGELVRFLLRNFSDQKPLVSTLNKYVKLVRTEHCFLL 105

Query: 439  FEELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSG 618
            FEELG+ D+WLQCLEVFRWMQKQ+WYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSG
Sbjct: 106  FEELGKRDRWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSG 165

Query: 619  CKPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKN 798
            C+PDTSVYNALITAHLHSRDKSKALAKAL YFEKMKG+ERCKP+IVTYNILLRAFAQA+N
Sbjct: 166  CRPDTSVYNALITAHLHSRDKSKALAKALGYFEKMKGIERCKPNIVTYNILLRAFAQARN 225

Query: 799  VDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNL 978
            VDQVNALFKDL+ S V+PD+YTFNGVMDAYGK GMIREME VLSRMKSNQ KPD+ITFNL
Sbjct: 226  VDQVNALFKDLENSSVSPDVYTFNGVMDAYGKNGMIREMESVLSRMKSNQCKPDVITFNL 285

Query: 979  LIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMG 1158
            LID+YG++Q FDKMEQVFKSLLRSK+KPTLPTFNSMI NYGKAR REKA+ +F+K+TDMG
Sbjct: 286  LIDSYGKRQAFDKMEQVFKSLLRSKDKPTLPTFNSMIVNYGKARLREKAESIFKKMTDMG 345

Query: 1159 YKPSFVTYECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEAD 1338
            Y PS+VT E LI+ YG CDCV +AR+IFD + E+ K+ +VST+N MLDVYC+NGLP EAD
Sbjct: 346  YTPSYVTNESLITTYGLCDCVSRAREIFDGIMENSKDIQVSTVNCMLDVYCINGLPSEAD 405

Query: 1339 MLFESVRTTGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGA 1518
             LFE   + G F  D+STYKLLYKAY KA+MKEL++KLLK+MDKDGI+PNK+FFL+ALGA
Sbjct: 406  KLFEYACSNG-FLPDASTYKLLYKAYTKANMKELLQKLLKHMDKDGIVPNKKFFLEALGA 464

Query: 1519 FG 1524
            FG
Sbjct: 465  FG 466


>ref|XP_009345820.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Pyrus x bretschneideri]
            gi|694437606|ref|XP_009345821.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Pyrus x bretschneideri]
          Length = 486

 Score =  665 bits (1716), Expect = 0.0
 Identities = 337/472 (71%), Positives = 392/472 (83%), Gaps = 7/472 (1%)
 Frame = +1

Query: 127  ISLPFTSSSLQLSPTLKFTHISTPIHAFTH----HP---SSPSGIRMCGVSARPQRKPGP 285
            +SL  +  SLQ S T +FT  S+  ++FT     HP     P     C VS RP+R PGP
Sbjct: 1    MSLTISPHSLQPS-TFQFTFHSSQNYSFTQPWLPHPLIRKRPRTQISC-VSTRPKRNPGP 58

Query: 286  KKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDK 465
            +   P        E  ++VR ++R+F+DK+PL+ TLNKYVK VRTEHCF+LFEELG++DK
Sbjct: 59   RTEDP--------EVREVVRTLMRSFSDKEPLLKTLNKYVKIVRTEHCFMLFEELGKTDK 110

Query: 466  WLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYN 645
            WLQCLEVFRWMQ+Q+WY+ADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYN
Sbjct: 111  WLQCLEVFRWMQRQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYN 170

Query: 646  ALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFK 825
            ALI+AHL+S+DK KAL KAL YF KMKGMERC+PSIVTYNILLRAFAQ++NV++VNALFK
Sbjct: 171  ALISAHLNSKDKVKALDKALGYFNKMKGMERCQPSIVTYNILLRAFAQSRNVEKVNALFK 230

Query: 826  DLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQ 1005
            DLDES+ +PDIYT+NGVMDAYGK G IREME VLSRMKSNQ KPDIITFNLLID+YG+KQ
Sbjct: 231  DLDESVASPDIYTYNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQ 290

Query: 1006 EFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYE 1185
            +FDKMEQVFKSLLRSKEKPTLPTFNSMI NYGKAR  EKA+ VFQK+TDM Y PSF+TYE
Sbjct: 291  QFDKMEQVFKSLLRSKEKPTLPTFNSMIINYGKARLMEKAEHVFQKMTDMKYTPSFITYE 350

Query: 1186 CLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTT 1365
             LI MYG+CDCV KARD+FD++ +S +E KVSTLNAMLDVYCMNGLP+EAD LF S  + 
Sbjct: 351  SLIMMYGFCDCVSKARDVFDRLADSGRELKVSTLNAMLDVYCMNGLPVEADKLFVSANSI 410

Query: 1366 GMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAF 1521
            G+   + STYKLLYK Y K +MKEL+EKLLK M+ DGI+PNKRFFL+ALGAF
Sbjct: 411  GV-RPNVSTYKLLYKYYTKGNMKELLEKLLKSMENDGIVPNKRFFLEALGAF 461


>ref|XP_010681106.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Beta vulgaris subsp. vulgaris]
            gi|731339902|ref|XP_010681107.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Beta vulgaris subsp. vulgaris]
            gi|731339904|ref|XP_010681108.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Beta vulgaris subsp. vulgaris]
            gi|870857097|gb|KMT08673.1| hypothetical protein
            BVRB_6g139490 [Beta vulgaris subsp. vulgaris]
          Length = 487

 Score =  664 bits (1713), Expect = 0.0
 Identities = 326/429 (75%), Positives = 379/429 (88%)
 Frame = +1

Query: 238  IRMCGVSARPQRKPGPKKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVR 417
            I++  +S+RP ++   K  +         EA++LVRLI+RNF+DK+PLV+TLNKYVK +R
Sbjct: 49   IKITCISSRPNKRSSSKSVNS--------EAQELVRLILRNFSDKEPLVSTLNKYVKILR 100

Query: 418  TEHCFLLFEELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLF 597
            TEHCF+LFE+LG+SDKWLQCLEVFRWMQKQ+WYIADNGVYSKLISVMGK+GQTRMAMWLF
Sbjct: 101  TEHCFMLFEDLGKSDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKRGQTRMAMWLF 160

Query: 598  SEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLR 777
            SEMRNSGC+PDTSVYNALITAHLHSRDKSK L KAL Y +KMKG+ERCKPSIVTYNILLR
Sbjct: 161  SEMRNSGCRPDTSVYNALITAHLHSRDKSKGLEKALGYLDKMKGIERCKPSIVTYNILLR 220

Query: 778  AFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKP 957
            AFAQA+NV+QVNALFKDL+ESIV+PDIYTFNGVMDAYGK GMIREME VLSRMK NQ KP
Sbjct: 221  AFAQARNVNQVNALFKDLEESIVSPDIYTFNGVMDAYGKNGMIREMEDVLSRMKINQCKP 280

Query: 958  DIITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVF 1137
            DIITFNLLIDAYG++QEF+KMEQV+KSLLRSKEKPTLPTFNSMI NYGKAR REKA+ VF
Sbjct: 281  DIITFNLLIDAYGKRQEFEKMEQVYKSLLRSKEKPTLPTFNSMIVNYGKARLREKAESVF 340

Query: 1138 QKITDMGYKPSFVTYECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMN 1317
            Q IT MGY P+++TYE +I MYG CD V +AR+ FD +T S+KE KVSTLNAMLDVYC++
Sbjct: 341  QSITTMGYTPNYITYESVIMMYGLCDSVSRARETFDGITASKKELKVSTLNAMLDVYCLS 400

Query: 1318 GLPMEADMLFESVRTTGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRF 1497
             LPMEADML +S ++ G+   +SSTYKLLYKAY KA+MK+L++KLLK MD+DGI+PNKRF
Sbjct: 401  SLPMEADMLLDSAQSLGVHP-NSSTYKLLYKAYTKANMKDLLQKLLKRMDQDGIVPNKRF 459

Query: 1498 FLDALGAFG 1524
            FL+ALGAFG
Sbjct: 460  FLEALGAFG 468


>ref|XP_011021906.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Populus euphratica]
          Length = 487

 Score =  662 bits (1708), Expect = 0.0
 Identities = 334/462 (72%), Positives = 392/462 (84%), Gaps = 6/462 (1%)
 Frame = +1

Query: 151  SLQLSP--TLKFTH----ISTPIHAFTHHPSSPSGIRMCGVSARPQRKPGPKKTHPKRXX 312
            SLQLS   +  FTH    I  P  +   HP   S  ++  VS RP+++P P  T  K   
Sbjct: 6    SLQLSTLHSSSFTHSVSLIYNPTPSLPWHPMKYSPTQVSCVSTRPKKRPVP--TDDKS-- 61

Query: 313  XXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQCLEVFR 492
                EA++LVR++VR+F+DKQPLV TLNKYVK +RTEHCF+LFEELG++D WLQCLEVFR
Sbjct: 62   ----EAQELVRVLVRSFSDKQPLVKTLNKYVKVMRTEHCFMLFEELGKTDNWLQCLEVFR 117

Query: 493  WMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHS 672
            WMQKQ+WY+ADNG YSKLISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNALITAHLHS
Sbjct: 118  WMQKQRWYVADNGCYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 177

Query: 673  RDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTP 852
            +DK+KAL KAL+YFEKMKG+ERC+P++VTYNILLRAFAQA+NV+QVNALFKDL+ESIV+P
Sbjct: 178  KDKAKALTKALAYFEKMKGIERCQPNVVTYNILLRAFAQARNVNQVNALFKDLEESIVSP 237

Query: 853  DIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVF 1032
            DIYT+NGV+DAYGK GMIREME VLSRMK +Q KPDIITFNLLID+YG+KQ+F+KMEQVF
Sbjct: 238  DIYTYNGVLDAYGKNGMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFEKMEQVF 297

Query: 1033 KSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYECLISMYGYC 1212
            KSLLRSKEKPTLPTFNSMI NYGKAR ++KA+ VF+K+ DM Y PSF+T+E LI MYG C
Sbjct: 298  KSLLRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFITFESLIMMYGIC 357

Query: 1213 DCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTGMFSVDSST 1392
            DCV KARDIFD M  S K  KVSTLNA+L+VYCMNGL MEA +L E+ R++G+   +SST
Sbjct: 358  DCVSKARDIFDDMVASGKVVKVSTLNAVLNVYCMNGLHMEAHILLENARSSGV-PPNSST 416

Query: 1393 YKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGA 1518
            YKLLY+AY KA MKEL++KLLK+MDKDGIIPNKRFF+DALGA
Sbjct: 417  YKLLYRAYTKAKMKELVQKLLKHMDKDGIIPNKRFFVDALGA 458


>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Cucumis sativus]
            gi|700193584|gb|KGN48788.1| hypothetical protein
            Csa_6G501290 [Cucumis sativus]
          Length = 528

 Score =  663 bits (1710), Expect = 0.0
 Identities = 339/464 (73%), Positives = 385/464 (82%), Gaps = 4/464 (0%)
 Frame = +1

Query: 145  SSSLQLSPTLKFTHISTPI-HAFTHHPSSPS---GIRMCGVSARPQRKPGPKKTHPKRXX 312
            S SLQ SPT   ++ S+ +   +   PSS       R+  +S RP RK G K        
Sbjct: 4    SFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRS---- 59

Query: 313  XXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQCLEVFR 492
                EAE+LVR I+RNF+DK+PL+ TL+KYV+ +RTEHCFLLFEELG+ DKWL+CLEVFR
Sbjct: 60   ----EAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFR 115

Query: 493  WMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHS 672
            WMQKQ+WYIADNGVYSKLIS+MGKKGQ RMAMWLFSEMRNSGC+PDTSVYNALITAHLHS
Sbjct: 116  WMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 175

Query: 673  RDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTP 852
            +DK+KAL K LSYFEKMKGMERCKP+IVTYNIL RAFAQA  VDQVN LFKDLDES+V+ 
Sbjct: 176  KDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSA 235

Query: 853  DIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVF 1032
            DIYT+NGVMDAYGK G I+EMEL+L+RMKSNQIKPDII+FNLLID+YG+KQ FDKMEQVF
Sbjct: 236  DIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVF 295

Query: 1033 KSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFVTYECLISMYGYC 1212
            KSLLRSKE+PTLPTFNSMITNYGKAR REKA+ VF+K+ DMGY PS+VT E LI MYG+C
Sbjct: 296  KSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 355

Query: 1213 DCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESVRTTGMFSVDSST 1392
            DCV KAR+IFD M  S KE +VSTLNAMLDVYC+NGLP+EAD+LFES     +F  DS+T
Sbjct: 356  DCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFP-DSTT 414

Query: 1393 YKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFG 1524
            YKLLYKAY KAD KEL+EKLLK MDK GIIPNKRFFLDALG  G
Sbjct: 415  YKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIG 458


>ref|XP_008227123.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Prunus mume]
          Length = 486

 Score =  660 bits (1703), Expect = 0.0
 Identities = 322/427 (75%), Positives = 378/427 (88%)
 Frame = +1

Query: 241  RMCGVSARPQRKPGPKKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRT 420
            R+  VS RP+RKPG K   P        +  ++VR+++R+F+DK+PL+ TLNKYV+ VRT
Sbjct: 44   RISCVSTRPKRKPGTKTEDP--------DVREVVRMLMRSFSDKEPLLKTLNKYVRIVRT 95

Query: 421  EHCFLLFEELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFS 600
            EHCFLLFEELG+SD+WLQCLEVFRWMQKQ+WY+ADNGVYSKLISVMGKKGQTRMAMWLFS
Sbjct: 96   EHCFLLFEELGKSDEWLQCLEVFRWMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFS 155

Query: 601  EMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRA 780
            EMRNSGC+PDTSVYNALI+AHL+S+DK++AL KAL YF+KMKGMERC+P+IVTYNILLRA
Sbjct: 156  EMRNSGCRPDTSVYNALISAHLNSKDKARALDKALRYFDKMKGMERCQPNIVTYNILLRA 215

Query: 781  FAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPD 960
            FAQ++NV++VN+LFKDLDESI +PDIYT+NGVMDAYGK G IREME VLSRMKSNQ KPD
Sbjct: 216  FAQSRNVEKVNSLFKDLDESIASPDIYTYNGVMDAYGKNGNIREMESVLSRMKSNQCKPD 275

Query: 961  IITFNLLIDAYGRKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQ 1140
            IITFNLLID+YG+KQ+FDKMEQVFKSLLRSKEKPTLPTFNSMI NYGKAR +EKA+ VF+
Sbjct: 276  IITFNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPTLPTFNSMIINYGKARLKEKAEDVFK 335

Query: 1141 KITDMGYKPSFVTYECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNG 1320
            K+ DM Y PSF+TYE LI MYG+CDCV KAR++FD++ +S KE KVSTLNAMLDVYCMNG
Sbjct: 336  KMIDMKYTPSFITYESLIMMYGFCDCVSKAREVFDRLADSGKELKVSTLNAMLDVYCMNG 395

Query: 1321 LPMEADMLFESVRTTGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFF 1500
            LP+EAD LF +  + G+   + STYKLLYKAY KA+MKEL+EKLLK MDKDGI+PNKRFF
Sbjct: 396  LPVEADKLFVNGNSIGV-RPNVSTYKLLYKAYTKANMKELLEKLLKCMDKDGIVPNKRFF 454

Query: 1501 LDALGAF 1521
            L+ALGAF
Sbjct: 455  LEALGAF 461


>gb|KJB71228.1| hypothetical protein B456_011G111900 [Gossypium raimondii]
            gi|763804291|gb|KJB71229.1| hypothetical protein
            B456_011G111900 [Gossypium raimondii]
            gi|763804292|gb|KJB71230.1| hypothetical protein
            B456_011G111900 [Gossypium raimondii]
          Length = 502

 Score =  659 bits (1699), Expect = 0.0
 Identities = 330/476 (69%), Positives = 385/476 (80%), Gaps = 1/476 (0%)
 Frame = +1

Query: 100  PLKFTKMTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSG-IRMCGVSARPQRK 276
            P    KM  I  P++          K     T I + T   + PS  I     + RP+RK
Sbjct: 6    PKAKNKMPLILSPYSLQLSTFPSPFKRNSSPTNISSLTQPCNLPSRPITRISCTTRPRRK 65

Query: 277  PGPKKTHPKRXXXXXXEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGR 456
             G  K           EA++LVR+++R+F DK+PLV TL++YV+ VR EHCFLLFEELG+
Sbjct: 66   TGSSKPEDA-------EAKELVRVLMRSFGDKEPLVKTLSRYVRVVRCEHCFLLFEELGK 118

Query: 457  SDKWLQCLEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTS 636
            +DKWLQCLEVFRWMQKQ+WYIADNGVYSKLI+VMGKKG+TRMAMWLFSEMRNSGC+PD+S
Sbjct: 119  TDKWLQCLEVFRWMQKQRWYIADNGVYSKLITVMGKKGRTRMAMWLFSEMRNSGCRPDSS 178

Query: 637  VYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNA 816
            VYNALITAHLHSRDK+KAL KAL YF KMKG+ERCKP++VTYNILLRAFAQA+NVDQVNA
Sbjct: 179  VYNALITAHLHSRDKAKALDKALGYFNKMKGIERCKPNVVTYNILLRAFAQARNVDQVNA 238

Query: 817  LFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMELVLSRMKSNQIKPDIITFNLLIDAYG 996
            LFKDL ES + PDIYTFNGVMDAYGK GMIREME VLSRMKSNQ KPDIITFN+LID+YG
Sbjct: 239  LFKDLAESSIAPDIYTFNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNVLIDSYG 298

Query: 997  RKQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARQREKADLVFQKITDMGYKPSFV 1176
            +KQEFDKMEQVFKSLLRSKEKPTLPTFNSMI NYGKAR +E+A+ +F+++TDM Y PSF+
Sbjct: 299  KKQEFDKMEQVFKSLLRSKEKPTLPTFNSMIINYGKARLKERAENIFKRMTDMKYTPSFI 358

Query: 1177 TYECLISMYGYCDCVWKARDIFDQMTESEKEKKVSTLNAMLDVYCMNGLPMEADMLFESV 1356
            TYE LI MYG+CDCV +AR+IFD++ +S KE KVSTLN ML+VYC NGLPMEAD LF+  
Sbjct: 359  TYESLIMMYGFCDCVSRAREIFDEIVDSGKEMKVSTLNVMLEVYCRNGLPMEADRLFDKA 418

Query: 1357 RTTGMFSVDSSTYKLLYKAYNKADMKELIEKLLKYMDKDGIIPNKRFFLDALGAFG 1524
               G    DSSTYKLLYKAY KADMK+L++KL+K M+KDGI+PNKRFFL+AL AFG
Sbjct: 419  NNIGAIP-DSSTYKLLYKAYTKADMKDLVQKLVKEMEKDGIVPNKRFFLEALEAFG 473