BLASTX nr result
ID: Rehmannia28_contig00027040
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00027040
(503 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013624966.1| PREDICTED: uncharacterized protein LOC106331... 117 6e-46
ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448... 105 2e-40
ref|XP_013680061.1| PREDICTED: putative geranylgeranyl pyrophosp... 135 2e-38
ref|XP_013694892.1| PREDICTED: uncharacterized protein LOC106398... 93 4e-38
emb|CAZ40333.1| hypothetical protein [Raphanus sativus] 88 2e-31
ref|XP_013616994.1| PREDICTED: uncharacterized protein LOC106323... 91 3e-30
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 100 2e-29
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] 99 2e-29
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 91 3e-29
ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobrom... 89 8e-29
ref|XP_013594793.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 119 9e-29
ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobrom... 87 1e-28
ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, part... 96 1e-28
ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobrom... 89 1e-28
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] 98 2e-28
ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [The... 87 2e-28
emb|CAN79339.1| hypothetical protein VITISV_044312 [Vitis vinifera] 95 2e-28
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 94 5e-28
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 87 6e-28
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 91 8e-28
>ref|XP_013624966.1| PREDICTED: uncharacterized protein LOC106331189 [Brassica oleracea
var. oleracea]
Length = 1178
Score = 117 bits (293), Expect(2) = 6e-46
Identities = 55/97 (56%), Positives = 68/97 (70%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGN+LRCLVGDN++SWDS L QAEFAHN A NRS GF PF+V+YGI+P GP+ L TLP
Sbjct: 990 LGNILRCLVGDNLRSWDSLLCQAEFAHNHAHNRSLGFSPFKVIYGIVPHGPLALSTLPQP 1049
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
GR D ++ L +HA + +L + KYK AAD
Sbjct: 1050 GEFHGRVVDLIDELAVVHARAQDNLQGTTIKYKRAAD 1086
Score = 94.0 bits (232), Expect(2) = 6e-46
Identities = 42/65 (64%), Positives = 54/65 (83%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR V F VGD VWAVL+K+R+P +Y+KL +RKIGPVEV+E+IN NAYRL LP ++ T++
Sbjct: 1089 RREVNFQVGDQVWAVLTKERFPVGQYNKLKARKIGPVEVVERINANAYRLALPPHVHTAD 1148
Query: 16 VFNVK 2
VFNVK
Sbjct: 1149 VFNVK 1153
>ref|XP_013745520.1| PREDICTED: uncharacterized protein LOC106448142 [Brassica napus]
Length = 701
Score = 105 bits (262), Expect(2) = 2e-40
Identities = 49/99 (49%), Positives = 65/99 (65%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGN+LRCLVGDN++SWD+ L QAEFAHN A N S G+ PF+VVYG++PR P+ L T P
Sbjct: 513 LGNMLRCLVGDNLRSWDTLLCQAEFAHNHAHNWSLGYSPFKVVYGVVPRDPLALATTPQP 572
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAADGK 195
GRA + +E + +H + +L + KYK D K
Sbjct: 573 GEFHGRAFELIEEITDLHTRAQDNLAGTAIKYKREVDKK 611
Score = 87.8 bits (216), Expect(2) = 2e-40
Identities = 43/71 (60%), Positives = 51/71 (71%)
Frame = -2
Query: 214 RQQQMARRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPS 35
R+ RR V F VGD VWAVL K+R+P Y KL RKIGPVE I KIN NAY+L LP+
Sbjct: 606 REVDKKRREVNFQVGDHVWAVLIKERFPTGRYKKLLPRKIGPVEFIAKINANAYKLRLPA 665
Query: 34 YIRTSNVFNVK 2
+I T++VFNVK
Sbjct: 666 HIHTADVFNVK 676
>ref|XP_013680061.1| PREDICTED: putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic [Brassica napus]
Length = 240
Score = 135 bits (341), Expect(2) = 2e-38
Identities = 64/99 (64%), Positives = 78/99 (78%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGNLLRCLVGDN+KSWD+KL QAEFAHN ALNRS GF PF+VVYG++PR P+DL TLP +
Sbjct: 27 LGNLLRCLVGDNIKSWDAKLCQAEFAHNHALNRSLGFSPFRVVYGLVPRCPLDLATLPDK 86
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAADGK 195
TR G A DF+ +LQ++H + +L S KYK+AAD K
Sbjct: 87 TRHHGEAIDFVTDLQKLHQQARDNLEASAVKYKSAADEK 125
Score = 50.1 bits (118), Expect(2) = 2e-38
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKI 68
R V F GDLVW ++ +R P EY+KL S+KIGPVEV++ I
Sbjct: 126 RCEVLFVPGDLVWVYMTNERLPLREYNKLKSKKIGPVEVVDDI 168
>ref|XP_013694892.1| PREDICTED: uncharacterized protein LOC106398939 [Brassica napus]
Length = 1353
Score = 92.8 bits (229), Expect(2) = 4e-38
Identities = 42/65 (64%), Positives = 55/65 (84%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR ++F VGD VWAVL+K+R+P + Y+KL SRK+GP+EV+EKIN NAYRL PS++ TS+
Sbjct: 1263 RRDLQFQVGDKVWAVLTKERFPPNSYNKLKSRKVGPLEVLEKINNNAYRLRQPSHMNTSD 1322
Query: 16 VFNVK 2
VFNVK
Sbjct: 1323 VFNVK 1327
Score = 92.4 bits (228), Expect(2) = 4e-38
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = -1
Query: 443 DSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSRTRLDGRATDFMENLQQ 264
DS L QAEFAHN A+NRST F PF V+YG++PR P+DL P RTR GRA D +E+
Sbjct: 1180 DSVLCQAEFAHNHAVNRSTRFSPFYVIYGVVPRSPIDLNIAPDRTRSHGRACDMIEDFTS 1239
Query: 263 IHAATKTHLLESNAKYKAAADGK 195
IH K +L + KYK + D +
Sbjct: 1240 IHQQVKANLEAATLKYKTSVDSR 1262
>emb|CAZ40333.1| hypothetical protein [Raphanus sativus]
Length = 785
Score = 88.2 bits (217), Expect(2) = 2e-31
Identities = 37/60 (61%), Positives = 51/60 (85%)
Frame = -2
Query: 181 FDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSNVFNVK 2
F+ GDLVW L+K+R P +Y+KL S+K+GPVEV+E+INPN YR+ LPS++RTS+VFN+K
Sbjct: 697 FEPGDLVWVYLTKERLPLRDYNKLKSKKLGPVEVVERINPNVYRVRLPSHLRTSDVFNIK 756
Score = 74.3 bits (181), Expect(2) = 2e-31
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = -1
Query: 374 FQVVYGIIPRGPVDLLTLPSRTRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAADGK 195
F VVYGI+PRGP+DL T P +TRL G A DF+ NLQ +H ++HL + KYK AAD K
Sbjct: 632 FCVVYGIVPRGPLDLSTAPDKTRLHGEAIDFITNLQDVHKLAQSHLESATTKYKLAADTK 691
>ref|XP_013616994.1| PREDICTED: uncharacterized protein LOC106323405 [Brassica oleracea
var. oleracea]
Length = 220
Score = 90.5 bits (223), Expect(2) = 3e-30
Identities = 42/65 (64%), Positives = 54/65 (83%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
+R + F+ GDLVW VL+KDR PA EY+KL +RKI PVEV+ +INPNAYR+ LP ++RTS+
Sbjct: 117 QRELLFETGDLVWVVLTKDRIPAGEYNKLNNRKIRPVEVLARINPNAYRVHLPHHLRTSD 176
Query: 16 VFNVK 2
VFNVK
Sbjct: 177 VFNVK 181
Score = 68.6 bits (166), Expect(2) = 3e-30
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -1
Query: 368 VVYGIIPRGPVDLLTLPSRTRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAADGK 195
VVYG++ RGP+DL LP +TR+ G A DF+ +Q++H +HL S +KYKAAAD K
Sbjct: 59 VVYGVLSRGPLDLTPLPDQTRVHGEAVDFVSKIQKVHQLASSHLTASASKYKAAADKK 116
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 99.8 bits (247), Expect(2) = 2e-29
Identities = 46/97 (47%), Positives = 63/97 (64%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGNLLRC+V D ++ WD+ L QAEFA NS+ NR+TG+ PF+V YG+ P+ PVDL+ LP+
Sbjct: 1246 LGNLLRCIVRDQLRKWDNXLPQAEFAFNSSTNRTTGYSPFEVAYGLKPKQPVDLIPLPTS 1305
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
R F +++ IH + + SN YK AAD
Sbjct: 1306 VRTSQDGDAFARHIRDIHEKVREKIKISNENYKEAAD 1342
Score = 56.6 bits (135), Expect(2) = 2e-29
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR ++F GDLV L +R+ Y KL ++K GP V++++ NAY L LPS + S
Sbjct: 1345 RRYIQFQEGDLVMVRLRPERFHPSTYQKLQAKKAGPFRVLKRLGENAYLLELPSNLHFSP 1404
Query: 16 VFNVK 2
+FNV+
Sbjct: 1405 IFNVE 1409
>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
Length = 1392
Score = 99.4 bits (246), Expect(2) = 2e-29
Identities = 46/97 (47%), Positives = 63/97 (64%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGNLLRC+V D ++ WD+ L QAEFA NS+ NR+TG+ PF+V YG+ P+ PVDL+ LP+
Sbjct: 1117 LGNLLRCIVRDQLRKWDNVLPQAEFAFNSSTNRTTGYSPFEVAYGLKPKQPVDLIPLPTS 1176
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
R F +++ IH + + SN YK AAD
Sbjct: 1177 VRTSQDGDAFARHIRDIHEKVREKIKISNENYKEAAD 1213
Score = 56.6 bits (135), Expect(2) = 2e-29
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR ++F GDLV L +R+ Y KL ++K GP V++++ NAY L LPS + S
Sbjct: 1216 RRYIQFQEGDLVMVRLRPERFHPSTYQKLQAKKAGPFRVLKRLGENAYLLELPSNLHFSP 1275
Query: 16 VFNVK 2
+FNV+
Sbjct: 1276 IFNVE 1280
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 91.3 bits (225), Expect(2) = 3e-29
Identities = 41/97 (42%), Positives = 64/97 (65%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
L +LR ++ N+K W+ L EFA+N +L+ +T CPFQ+VYG++PR P+DL+ LPS
Sbjct: 1376 LSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSS 1435
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
+L+ AT E + ++H TK ++ NA+YK A+D
Sbjct: 1436 EKLNFDATRRAELMLKLHETTKENIERMNARYKFASD 1472
Score = 64.3 bits (155), Expect(2) = 3e-29
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
R+ + F+ GDLVW L K+R+P KL R GP +V+EKIN NAYRL LP+ S
Sbjct: 1475 RKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAYRLDLPADFGVSP 1534
Query: 16 VFNV 5
FN+
Sbjct: 1535 TFNI 1538
>ref|XP_007019612.1| Uncharacterized protein TCM_035725 [Theobroma cacao]
gi|508724940|gb|EOY16837.1| Uncharacterized protein
TCM_035725 [Theobroma cacao]
Length = 499
Score = 88.6 bits (218), Expect(2) = 8e-29
Identities = 41/97 (42%), Positives = 63/97 (64%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGN+LRCL+ +N K+WD + QAEFA+N+++NRS PF+V YG+ P+ +DL+ LP
Sbjct: 244 LGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEVAYGLKPQHVLDLVPLPQE 303
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
R+ F +++++IH K L SNA+Y A+
Sbjct: 304 ARVSNEGELFADHIRKIHEEVKAALKASNAEYSFTAN 340
Score = 65.5 bits (158), Expect(2) = 8e-29
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR EF+ GD V L ++R+P YHKL SRK GP +V++KI+ NAY + LP ++ S+
Sbjct: 343 RRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLIELPPELQISH 402
Query: 16 VFNV 5
+FN+
Sbjct: 403 IFNI 406
>ref|XP_013594793.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC106302944 [Brassica oleracea var. oleracea]
Length = 464
Score = 119 bits (298), Expect = 9e-29
Identities = 55/97 (56%), Positives = 72/97 (74%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LG+LLRCLVGDN+K+WD L +AEFAHN A+NRST FCPF++VYG++P GPVDL P
Sbjct: 105 LGDLLRCLVGDNIKTWDDILCKAEFAHNHAINRSTSFCPFRIVYGLVPHGPVDLGLAPDL 164
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
+R + +AT+ + +L IH +L S+AKYK AAD
Sbjct: 165 SRENVQATELVGSLSHIHGQVHDNLQVSSAKYKVAAD 201
>ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobroma cacao]
gi|508727408|gb|EOY19305.1| Uncharacterized protein
TCM_044370 [Theobroma cacao]
Length = 1306
Score = 87.0 bits (214), Expect(2) = 1e-28
Identities = 41/97 (42%), Positives = 61/97 (62%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGN+LRCL+ +N K+WD QAEFA+N+++NRS PF+ YG+ P+ +DL+ LP
Sbjct: 1093 LGNILRCLIQNNPKTWDLVKPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQE 1152
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
R+ F +++Q+IH K L SNA+Y A+
Sbjct: 1153 ARVSNEGELFADHIQKIHEEVKAALKASNAEYSFTAN 1189
Score = 66.6 bits (161), Expect(2) = 1e-28
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR EF+ GD V L ++R+P YHKL SRK GP +V++KI+ NAY + LP ++ S+
Sbjct: 1192 RRKQEFEEGDQVLVYLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLIELPPELQISH 1251
Query: 16 VFNV 5
+FNV
Sbjct: 1252 IFNV 1255
>ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
gi|462403623|gb|EMJ09180.1| hypothetical protein
PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 96.3 bits (238), Expect(2) = 1e-28
Identities = 47/97 (48%), Positives = 63/97 (64%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LG+LLRCLVGD +WD L AEFA+N+++NRSTG PF+VV+G PR PVDL+ LP
Sbjct: 1166 LGDLLRCLVGDKPGNWDLLLPVAEFAYNNSVNRSTGKSPFEVVHGFSPRSPVDLVALPVA 1225
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
R AT F E+++Q+H + + YK AA+
Sbjct: 1226 ARTSDSATSFAEHIRQLHDDVRRQISMHTDTYKLAAN 1262
Score = 57.0 bits (136), Expect(2) = 1e-28
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR EF GD V + +R+P H + KL +R +GP +I+K+ NAY + LP+ + S
Sbjct: 1265 RRQQEFREGDFVMVRVCPERFPKHSFKKLHARSMGPYRIIKKLGSNAYLIELPADMHISP 1324
Query: 16 VFNV 5
+FNV
Sbjct: 1325 IFNV 1328
>ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobroma cacao]
gi|508724802|gb|EOY16699.1| Uncharacterized protein
TCM_035549 [Theobroma cacao]
Length = 1392
Score = 88.6 bits (218), Expect(2) = 1e-28
Identities = 41/97 (42%), Positives = 63/97 (64%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGN+LRCL+ +N K+WD + QAEFA+N+++NRS PF+ YG+ P+ +DL+ LP
Sbjct: 1137 LGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKPQHVLDLVPLPQE 1196
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
R+ F +++++IH KT L SNA+Y A+
Sbjct: 1197 PRVSNEGELFADHIRKIHEEVKTALKASNAQYSFTAN 1233
Score = 64.7 bits (156), Expect(2) = 1e-28
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR EF+ GD V L ++R+P YHKL SRK GP +V++KI+ NAY + LP ++ S
Sbjct: 1236 RRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLIELPPELQISP 1295
Query: 16 VFNV 5
+FNV
Sbjct: 1296 IFNV 1299
>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
Length = 1323
Score = 97.8 bits (242), Expect(2) = 2e-28
Identities = 45/97 (46%), Positives = 63/97 (64%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGNLLRC+V D +++WD+ L QAEFA NS+ NR+TG+ PF+V YG+ P+ PVDL+ LP+
Sbjct: 1047 LGNLLRCIVRDQLRNWDNVLPQAEFAFNSSTNRTTGYLPFEVAYGLKPKQPVDLIPLPTS 1106
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
R F +++ IH + + SN YK A D
Sbjct: 1107 VRTSQDGDAFARHIRDIHEKVREKIKISNENYKEAXD 1143
Score = 55.1 bits (131), Expect(2) = 2e-28
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR ++F G LV L +R+ Y KL ++K GP V++++ NAY L LPS + S
Sbjct: 1146 RRYIQFQEGGLVMVRLRPERFHPSTYQKLQAKKAGPFRVLKRLGENAYLLELPSNLXFSP 1205
Query: 16 VFNVK 2
+FNVK
Sbjct: 1206 IFNVK 1210
>ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508700944|gb|EOX92840.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 647
Score = 87.0 bits (214), Expect(2) = 2e-28
Identities = 41/97 (42%), Positives = 62/97 (63%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGN+LRCL+ +N K+WD + QAEFA+N+++NRS PF+V YG+ P+ +DL+ LP
Sbjct: 465 LGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEVAYGLKPQHVLDLVPLPQE 524
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
R+ F ++++IH K L SNA+Y A+
Sbjct: 525 ARVSNEGELFAYHIRKIHEEVKAALKASNAEYSFTAN 561
Score = 65.5 bits (158), Expect(2) = 2e-28
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR EF+ GD V L ++R+P YHKL SRK GP +VI+KI+ NAY + LP ++ S
Sbjct: 564 RRKQEFEEGDQVLVHLRQERFPKGTYHKLKSRKFGPCKVIKKISSNAYLIELPPELQISP 623
Query: 16 VFNV 5
+FNV
Sbjct: 624 IFNV 627
>emb|CAN79339.1| hypothetical protein VITISV_044312 [Vitis vinifera]
Length = 354
Score = 95.1 bits (235), Expect(2) = 2e-28
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGNLLRC+V D +++WD+ L QAEFA NS+ NR+TG+ PF+V YG+ P+ VDL+ LP+
Sbjct: 79 LGNLLRCIVRDQLRNWDNVLPQAEFAFNSSTNRTTGYSPFEVAYGLKPKQLVDLIPLPTS 138
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
F ++Q IH + + SN YK AAD
Sbjct: 139 VHTSQDGDAFTRHIQDIHENVREKIKISNENYKEAAD 175
Score = 57.4 bits (137), Expect(2) = 2e-28
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR ++F GDLV L +R+ Y KL ++K GP +V++++ NAY L LPS + S
Sbjct: 178 RRYIQFQEGDLVMVRLRPERFHPSTYQKLQAKKAGPFQVLKRLGENAYLLELPSNLHFSP 237
Query: 16 VFNVK 2
+FNV+
Sbjct: 238 IFNVE 242
>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
Length = 1292
Score = 94.0 bits (232), Expect(2) = 5e-28
Identities = 43/95 (45%), Positives = 60/95 (63%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
LGNLLRC+V D ++ WD+ L Q EFA NS+ NR+TG+ PF+V YG+ P+ PVDL+ LP+
Sbjct: 1077 LGNLLRCIVRDQLRKWDNVLPQVEFAFNSSTNRTTGYSPFEVAYGLKPKQPVDLIPLPTS 1136
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAA 207
R F +++ IH + + SN YK A
Sbjct: 1137 VRTSQDGDAFARHIRDIHEKVREKIKISNENYKEA 1171
Score = 57.4 bits (137), Expect(2) = 5e-28
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR ++F GDLV L +R+ Y KL ++K GP V++++ NAY L LPS + S
Sbjct: 1176 RRYIQFQXGDLVMVCLRPERFHPSTYQKLQAKKAGPFRVLKQLGENAYLLELPSNLHFSP 1235
Query: 16 VFNVK 2
+FNV+
Sbjct: 1236 IFNVE 1240
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 86.7 bits (213), Expect(2) = 6e-28
Identities = 39/92 (42%), Positives = 59/92 (64%)
Frame = -1
Query: 476 RCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSRTRLDG 297
R ++ N+K W+ L EFA+N +L+ +T CPFQ+VYG++PR P+DL+ LPS +L+
Sbjct: 1327 RAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNF 1386
Query: 296 RATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
A E + ++H TK ++ NAKYK A D
Sbjct: 1387 DAKQRAELMLKLHETTKENIERMNAKYKFAGD 1418
Score = 64.3 bits (155), Expect(2) = 6e-28
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR + F+ GDLVW L K+R+P KL R GP +V+ KIN NAY++ LP+ R S+
Sbjct: 1421 RRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFRVSS 1480
Query: 16 VFNV 5
FNV
Sbjct: 1481 TFNV 1484
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 90.5 bits (223), Expect(2) = 8e-28
Identities = 41/97 (42%), Positives = 62/97 (63%)
Frame = -1
Query: 491 LGNLLRCLVGDNVKSWDSKLSQAEFAHNSALNRSTGFCPFQVVYGIIPRGPVDLLTLPSR 312
L +LR ++ N+K W+ L EFA+N +L+ +T CPFQ+VYG++PR P+DL+ LPS
Sbjct: 1373 LSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSS 1432
Query: 311 TRLDGRATDFMENLQQIHAATKTHLLESNAKYKAAAD 201
+L+ A E + ++H TK ++ NAKYK A D
Sbjct: 1433 EKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGD 1469
Score = 60.1 bits (144), Expect(2) = 8e-28
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = -2
Query: 196 RRPVEFDVGDLVWAVLSKDRYPAHEYHKLASRKIGPVEVIEKINPNAYRLGLPSYIRTSN 17
RR + F+ GDLVW L K+R+P KL R GP +V+ KIN NAY++ LP+ S
Sbjct: 1472 RRELTFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSP 1531
Query: 16 VFNV 5
FNV
Sbjct: 1532 TFNV 1535