BLASTX nr result
ID: Rehmannia28_contig00025959
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00025959
(1173 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containi... 568 0.0
ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containi... 509 e-175
ref|XP_015062709.1| PREDICTED: pentatricopeptide repeat-containi... 428 e-144
ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containi... 428 e-144
ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containi... 428 e-144
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 426 e-143
ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containi... 426 e-143
ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containi... 425 e-142
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 424 e-142
gb|KVI07821.1| Pentatricopeptide repeat-containing protein [Cyna... 378 e-124
gb|KVI07824.1| Pentatricopeptide repeat-containing protein [Cyna... 363 e-118
ref|XP_010276672.1| PREDICTED: pentatricopeptide repeat-containi... 355 e-115
gb|KVI07848.1| Pentatricopeptide repeat-containing protein [Cyna... 360 e-115
ref|XP_008388776.1| PREDICTED: pentatricopeptide repeat-containi... 344 e-110
ref|XP_010656116.1| PREDICTED: pentatricopeptide repeat-containi... 342 e-110
ref|XP_009337222.1| PREDICTED: pentatricopeptide repeat-containi... 342 e-109
ref|XP_015889017.1| PREDICTED: pentatricopeptide repeat-containi... 342 e-109
emb|CDO97508.1| unnamed protein product [Coffea canephora] 332 e-109
ref|XP_009359734.1| PREDICTED: pentatricopeptide repeat-containi... 338 e-108
ref|XP_008337852.1| PREDICTED: pentatricopeptide repeat-containi... 338 e-108
>ref|XP_011087804.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081065|ref|XP_011087805.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081067|ref|XP_011087806.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081069|ref|XP_011087807.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081071|ref|XP_011087808.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum] gi|747081073|ref|XP_011087809.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Sesamum indicum]
gi|747081075|ref|XP_011087810.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Sesamum indicum]
Length = 552
Score = 568 bits (1463), Expect = 0.0
Identities = 275/387 (71%), Positives = 328/387 (84%)
Frame = +1
Query: 13 MRFRAQRVSISKILSTALFHGQARLESSKASPASTLWFIKVVCTLCIRHSQSFVVFNSDY 192
M+F AQRVSISK+ STAL HG AR+ESS +SPAS +WFIKVVCTLC+ HS S F++DY
Sbjct: 3 MQFWAQRVSISKVFSTALLHGHARIESSHSSPASIVWFIKVVCTLCVHHSHSLNFFDTDY 62
Query: 193 FREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLH 372
FRE L+PFVA+ V+ HI +RLNNP+LAFSFFRY+RLS NL+H ES F+LLLRSLCRM LH
Sbjct: 63 FRESLNPFVAFGVVYHINNRLNNPDLAFSFFRYSRLSFNLLHLESTFNLLLRSLCRMGLH 122
Query: 373 DSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSV 552
DSAKLV+ YM+ADG PN+A+LD +++SF NAGKFR+AE ILIA+AE+CN++GET S V
Sbjct: 123 DSAKLVFEYMKADGFWPNSAVLDLVVSSFGNAGKFRVAEEILIAQAEICNEKGETVSSFV 182
Query: 553 CNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDV 732
NKFL +LI+RNRVDEAV+ FRGH+L+ SF PD SFN V++GLC GKV+ AFE DV
Sbjct: 183 YNKFLCILINRNRVDEAVLFFRGHILRLGSFCPDTQSFNIVIKGLCRVGKVDTAFEFLDV 242
Query: 733 MRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSG 912
MRSF CHPDLVTYNTLING CRVG++DRA ELLRE++ S FSP+VVTYTSVISGYC+SG
Sbjct: 243 MRSFSCHPDLVTYNTLINGFCRVGHMDRAEELLREVKPQSGFSPDVVTYTSVISGYCRSG 302
Query: 913 KMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTST 1092
KME+AA LFDEMIN G RPNLFT+NVIIDGFGK G+VASALKMYE+MV+ GFHPD+VT T
Sbjct: 303 KMEEAAALFDEMINYGTRPNLFTFNVIIDGFGKKGKVASALKMYERMVNCGFHPDVVTFT 362
Query: 1093 SLVDAHSRLGEMDYCVKLWDEMNERKV 1173
SL+D + R GE++ +KLWDEMNERKV
Sbjct: 363 SLIDCYCRRGELEQGMKLWDEMNERKV 389
Score = 106 bits (265), Expect = 1e-21
Identities = 88/358 (24%), Positives = 159/358 (44%), Gaps = 9/358 (2%)
Frame = +1
Query: 76 QARLESSKASPASTLWFIKVVCTLCIRHSQSFVVFNSDYFREHL--------DPFVAYVV 231
QA + + K S+ + K +C L R+ V +FR H+ D +V
Sbjct: 167 QAEICNEKGETVSSFVYNKFLCILINRNRVDEAVL---FFRGHILRLGSFCPDTQSFNIV 223
Query: 232 INHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAK-LVYHYMEA 408
I + R+ + AF F R S + ++ L+ CR+ D A+ L+
Sbjct: 224 IKGLC-RVGKVDTAFEFLDVMR-SFSCHPDLVTYNTLINGFCRVGHMDRAEELLREVKPQ 281
Query: 409 DGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRN 588
G P+ +I+ + +GK A + E+ N G + N + +
Sbjct: 282 SGFSPDVVTYTSVISGYCRSGKMEEAAALF---DEMINY-GTRPNLFTFNVIIDGFGKKG 337
Query: 589 RVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVT 768
+V A+ ++ + + F PD +F +++ C G++E+ +L+D M P+ T
Sbjct: 338 KVASALKMYE--RMVNCGFHPDVVTFTSLIDCYCRRGELEQGMKLWDEMNERKVSPNAFT 395
Query: 769 YNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEM 948
++ LI LC+ ++ A +LLR++ + P Y VI G+CK+G +++A + EM
Sbjct: 396 FSILITSLCKENRLNEARDLLRQLNWREDIVPPPFIYNPVIDGFCKAGNIDEANAIVKEM 455
Query: 949 INCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLG 1122
G + T+ ++I G G + A+ MY KM+S G PD +T +SL+ + G
Sbjct: 456 EMKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKMLSIGCAPDNITISSLISCLRKAG 513
Score = 80.9 bits (198), Expect = 5e-13
Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 7/244 (2%)
Frame = +1
Query: 340 LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELC 519
++ CR + A ++ M G PN + +I F GK A + + + C
Sbjct: 294 VISGYCRSGKMEEAAALFDEMINYGTRPNLFTFNVIIDGFGKKGKVASALK-MYERMVNC 352
Query: 520 NQRGETFSPSVCNKFLSLL---ISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 690
F P V F SL+ R +++ + L+ + R +P+ +F+ ++ LC
Sbjct: 353 G-----FHPDVVT-FTSLIDCYCRRGELEQGMKLW--DEMNERKVSPNAFTFSILITSLC 404
Query: 691 MSGKVEEAFELFDVMRSFGCHPDLVT----YNTLINGLCRVGNVDRAHELLREIQLHSEF 858
++ EA D++R D+V YN +I+G C+ GN+D A+ +++E+++
Sbjct: 405 KENRLNEAR---DLLRQLNWREDIVPPPFIYNPVIDGFCKAGNIDEANAIVKEMEMKGCV 461
Query: 859 SPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALK 1038
+ T+T +I G+C G+M +A ++++M++ G P+ T + +I K G A +
Sbjct: 462 HDKM-TFTILILGHCMKGRMFEAIGMYNKMLSIGCAPDNITISSLISCLRKAGMAREANE 520
Query: 1039 MYEK 1050
+ EK
Sbjct: 521 IQEK 524
>ref|XP_012828447.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Erythranthe guttata] gi|848930449|ref|XP_012828448.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Erythranthe guttata]
gi|604298483|gb|EYU18527.1| hypothetical protein
MIMGU_mgv1a003955mg [Erythranthe guttata]
Length = 552
Score = 509 bits (1311), Expect = e-175
Identities = 250/392 (63%), Positives = 309/392 (78%), Gaps = 5/392 (1%)
Frame = +1
Query: 13 MRFRAQRVSISKILSTALFHGQARLESSKA-----SPASTLWFIKVVCTLCIRHSQSFVV 177
M+F A RV ISK+ +LFHG++ L S + SP+ST WF+KVVCTLCIR S S
Sbjct: 1 MQFWAPRVPISKVFLASLFHGRSSLVESSSPPSPSSPSSTFWFVKVVCTLCIRRSPSLAF 60
Query: 178 FNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLC 357
+DYFR +L+P VA+ V+ HI RLNNP+LAF+FFR +RL LNLIH E FDLLLRSLC
Sbjct: 61 VETDYFRVNLNPSVAFAVVYHINSRLNNPDLAFTFFRCSRLRLNLIHLEPTFDLLLRSLC 120
Query: 358 RMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGET 537
+M HDSA+LVY YM++DG LP++++LDF+++SFANAGKFRIAE ILIA+AE CN++ E
Sbjct: 121 QMGRHDSAELVYQYMKSDGFLPDSSVLDFVVSSFANAGKFRIAEEILIARAEYCNEKDEL 180
Query: 538 FSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAF 717
S V N FLS+L ++NR+D+AV+ F+ H+L+ +SF PD CSFN VMRGLC + KV++AF
Sbjct: 181 VSSFVYNNFLSMLTNKNRIDDAVLFFKSHILRLKSFCPDTCSFNIVMRGLCRASKVDKAF 240
Query: 718 ELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISG 897
E FDVMRSF C PDLVTYNTLINGLCRVG VDRA ELLREI++ SEFS +VVTYTSVISG
Sbjct: 241 EFFDVMRSFSCSPDLVTYNTLINGLCRVGKVDRAEELLREIKVQSEFSADVVTYTSVISG 300
Query: 898 YCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPD 1077
YCK GK + AA LF+EMIN GIRPNLFT+N IIDGFGK GEVASA KMYE+M + GF PD
Sbjct: 301 YCKLGKTDAAAFLFEEMINNGIRPNLFTFNAIIDGFGKKGEVASASKMYERMTATGFRPD 360
Query: 1078 IVTSTSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
+VT TSL+D H R G++ + L +EMNE++V
Sbjct: 361 VVTFTSLIDGHCRCGDLGQGIHLLNEMNEKRV 392
Score = 121 bits (303), Expect = 1e-26
Identities = 94/340 (27%), Positives = 161/340 (47%), Gaps = 5/340 (1%)
Frame = +1
Query: 154 RHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNL---AFSFFRYTRLSLNLIHSE 324
R ++ ++ ++Y E D V+ V N+ L N N A FF+ L L +
Sbjct: 161 RIAEEILIARAEYCNEK-DELVSSFVYNNFLSMLTNKNRIDDAVLFFKSHILRLKSFCPD 219
Query: 325 S-AFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILI 501
+ +F++++R LCR S D A + M + P+ + LI GK AE +L
Sbjct: 220 TCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTLINGLCRVGKVDRAEELL- 278
Query: 502 AKAELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMR 681
E+ Q + +S + D A LF + + P+ +FN ++
Sbjct: 279 --REIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMI--NNGIRPNLFTFNAIID 334
Query: 682 GLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFS 861
G G+V A ++++ M + G PD+VT+ +LI+G CR G++ + LL E+ S
Sbjct: 335 GFGKKGEVASASKMYERMTATGFRPDVVTFTSLIDGHCRCGDLGQGIHLLNEMN-EKRVS 393
Query: 862 PNVVTYTSVISGYCKSGKMEDAANLFDEMI-NCGIRPNLFTYNVIIDGFGKIGEVASALK 1038
PNV T++ +IS CK ++ +A +L +++ I P F YN +IDG+ K G V A
Sbjct: 394 PNVFTFSVLISALCKENRLNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKAGNVDEANA 453
Query: 1039 MYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKLWDEM 1158
+ +M + G D +T T L+ H G M + ++++M
Sbjct: 454 IVAEMEAKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKM 493
Score = 78.2 bits (191), Expect = 4e-12
Identities = 61/242 (25%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Frame = +1
Query: 340 LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELC 519
++ C++ D+A ++ M +GI PN + +I F G+ A ++ E
Sbjct: 297 VISGYCKLGKTDAAAFLFEEMINNGIRPNLFTFNAIIDGFGKKGEVASASKMY----ERM 352
Query: 520 NQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRG-HMLKS---RSFAPDNCSFNTVMRGL 687
G F P V F SL+ R + L +G H+L + +P+ +F+ ++ L
Sbjct: 353 TATG--FRPDVVT-FTSLIDGHCRCGD---LGQGIHLLNEMNEKRVSPNVFTFSVLISAL 406
Query: 688 CMSGKVEEAFELFDVMR-SFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSP 864
C ++ EA +L + ++ P YN +I+G C+ GNVD A+ ++ E++
Sbjct: 407 CKENRLNEARDLLNQLKWREDIVPPPFVYNPVIDGYCKAGNVDEANAIVAEMEAKGCVHD 466
Query: 865 NVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMY 1044
+ T+T +I G+C G+M +A ++++M++ G P+ T + +I K G A ++
Sbjct: 467 KM-TFTILILGHCMKGRMFEAIGMYNKMLSVGCVPDNITMSSLISCLRKAGMAREANEIE 525
Query: 1045 EK 1050
+K
Sbjct: 526 QK 527
>ref|XP_015062709.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X3 [Solanum pennellii]
Length = 510
Score = 428 bits (1100), Expect = e-144
Identities = 216/384 (56%), Positives = 276/384 (71%), Gaps = 7/384 (1%)
Frame = +1
Query: 43 SKILSTALFHGQARLESSKASPA-------STLWFIKVVCTLCIRHSQSFVVFNSDYFRE 201
S I A FHG L SSK+ P+ +WF KVVC LC HSQS VF SDYFR+
Sbjct: 9 SNIFLIARFHG---LTSSKSIPSYGPGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQ 65
Query: 202 HLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSA 381
+LDP +A+ VI+HI LNNP LAF F + TR++LNL+H +F+LLLRSL +M HDSA
Sbjct: 66 NLDPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSA 125
Query: 382 KLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNK 561
LV+ YM+ADG L N++L+ ++ + ANAGKF IA+ ILI++AEL + G P V N
Sbjct: 126 MLVFKYMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNS 185
Query: 562 FLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRS 741
LSLL+ R+RVDEAV F+ H+L+S PD C+FNTV+RGLC G V++AFE F+ M S
Sbjct: 186 LLSLLMKRSRVDEAVDFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGS 245
Query: 742 FGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKME 921
FGC PD VTYNTLINGLC VG V+RA LL +QL SP+VVTYTS+ISGYCK G+M+
Sbjct: 246 FGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMD 305
Query: 922 DAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLV 1101
+A NL DEMI+ GI PNL T+N++I+GFGKIG++ SA+KMY KM + G+ PD+VT TSLV
Sbjct: 306 EAINLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLV 365
Query: 1102 DAHSRLGEMDYCVKLWDEMNERKV 1173
D + R GE+D +KLWD+MN R +
Sbjct: 366 DGYCRTGEVDQGLKLWDDMNSRNL 389
Score = 102 bits (254), Expect = 3e-20
Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 34/326 (10%)
Frame = +1
Query: 211 PFVAYVVINHITHRLNNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
PFV +++ + R + + A FF++ L S L F+ ++R LCR+ D A
Sbjct: 180 PFVHNSLLSLLMKR-SRVDEAVDFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFE 238
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFL 567
++ M + G P+ + LI G+ A+ +L L Q G + +
Sbjct: 239 FFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLL---GNLQLQDGLSPDVVTYTSLI 295
Query: 568 SLLISRNRVDEAV-------------------VLFRGH--------------MLKSRSFA 648
S R+DEA+ +L G + + +
Sbjct: 296 SGYCKLGRMDEAINLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYP 355
Query: 649 PDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHEL 828
PD +F +++ G C +G+V++ +L+D M S P+L TY+ LI+ L + ++ A EL
Sbjct: 356 PDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAREL 415
Query: 829 LREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFG 1008
LR+++ + P Y V+ G+CK+G + +A + EM + G + T+ ++I G
Sbjct: 416 LRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHC 475
Query: 1009 KIGEVASALKMYEKMVSDGFHPDIVT 1086
G + AL +++KM+S G PD +T
Sbjct: 476 MKGRMLEALAIFDKMLSLGCVPDDIT 501
>ref|XP_015062693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X2 [Solanum pennellii]
gi|969996347|ref|XP_015062701.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum pennellii]
Length = 529
Score = 428 bits (1100), Expect = e-144
Identities = 216/384 (56%), Positives = 276/384 (71%), Gaps = 7/384 (1%)
Frame = +1
Query: 43 SKILSTALFHGQARLESSKASPA-------STLWFIKVVCTLCIRHSQSFVVFNSDYFRE 201
S I A FHG L SSK+ P+ +WF KVVC LC HSQS VF SDYFR+
Sbjct: 9 SNIFLIARFHG---LTSSKSIPSYGPGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQ 65
Query: 202 HLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSA 381
+LDP +A+ VI+HI LNNP LAF F + TR++LNL+H +F+LLLRSL +M HDSA
Sbjct: 66 NLDPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSA 125
Query: 382 KLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNK 561
LV+ YM+ADG L N++L+ ++ + ANAGKF IA+ ILI++AEL + G P V N
Sbjct: 126 MLVFKYMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNS 185
Query: 562 FLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRS 741
LSLL+ R+RVDEAV F+ H+L+S PD C+FNTV+RGLC G V++AFE F+ M S
Sbjct: 186 LLSLLMKRSRVDEAVDFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGS 245
Query: 742 FGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKME 921
FGC PD VTYNTLINGLC VG V+RA LL +QL SP+VVTYTS+ISGYCK G+M+
Sbjct: 246 FGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMD 305
Query: 922 DAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLV 1101
+A NL DEMI+ GI PNL T+N++I+GFGKIG++ SA+KMY KM + G+ PD+VT TSLV
Sbjct: 306 EAINLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLV 365
Query: 1102 DAHSRLGEMDYCVKLWDEMNERKV 1173
D + R GE+D +KLWD+MN R +
Sbjct: 366 DGYCRTGEVDQGLKLWDDMNSRNL 389
Score = 103 bits (258), Expect = 9e-21
Identities = 84/338 (24%), Positives = 151/338 (44%), Gaps = 34/338 (10%)
Frame = +1
Query: 211 PFVAYVVINHITHRLNNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
PFV +++ + R + + A FF++ L S L F+ ++R LCR+ D A
Sbjct: 180 PFVHNSLLSLLMKR-SRVDEAVDFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFE 238
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFL 567
++ M + G P+ + LI G+ A+ +L L Q G + +
Sbjct: 239 FFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLL---GNLQLQDGLSPDVVTYTSLI 295
Query: 568 SLLISRNRVDEAV-------------------VLFRGH--------------MLKSRSFA 648
S R+DEA+ +L G + + +
Sbjct: 296 SGYCKLGRMDEAINLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYP 355
Query: 649 PDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHEL 828
PD +F +++ G C +G+V++ +L+D M S P+L TY+ LI+ L + ++ A EL
Sbjct: 356 PDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAREL 415
Query: 829 LREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFG 1008
LR+++ + P Y V+ G+CK+G + +A + EM + G + T+ ++I G
Sbjct: 416 LRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHC 475
Query: 1009 KIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLG 1122
G + AL +++KM+S G PD +T + L + G
Sbjct: 476 MKGRMLEALAIFDKMLSLGCVPDDITVSCLTSCLLKAG 513
Score = 61.6 bits (148), Expect = 8e-07
Identities = 45/173 (26%), Positives = 77/173 (44%)
Frame = +1
Query: 331 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKA 510
F L+ CR D ++ M + + PN LI++ + + A +L
Sbjct: 361 FTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEARELL---R 417
Query: 511 ELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 690
+L ++ P + N L + EA V+ ++S+ D +F ++ G C
Sbjct: 418 QLKSRDDIVPQPFLYNPVLDGFCKAGNLSEANVI--AAEMESKGCCHDKITFTILILGHC 475
Query: 691 MSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLH 849
M G++ EA +FD M S GC PD +T + L + L + G V A++ LR + H
Sbjct: 476 MKGRMLEALAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKDLRRLLQH 528
>ref|XP_015062668.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
isoform X1 [Solanum pennellii]
gi|969996341|ref|XP_015062677.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
gi|969996343|ref|XP_015062684.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum pennellii]
Length = 552
Score = 428 bits (1100), Expect = e-144
Identities = 216/384 (56%), Positives = 276/384 (71%), Gaps = 7/384 (1%)
Frame = +1
Query: 43 SKILSTALFHGQARLESSKASPA-------STLWFIKVVCTLCIRHSQSFVVFNSDYFRE 201
S I A FHG L SSK+ P+ +WF KVVC LC HSQS VF SDYFR+
Sbjct: 9 SNIFLIARFHG---LTSSKSIPSYGPGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQ 65
Query: 202 HLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSA 381
+LDP +A+ VI+HI LNNP LAF F + TR++LNL+H +F+LLLRSL +M HDSA
Sbjct: 66 NLDPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSA 125
Query: 382 KLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNK 561
LV+ YM+ADG L N++L+ ++ + ANAGKF IA+ ILI++AEL + G P V N
Sbjct: 126 MLVFKYMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNS 185
Query: 562 FLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRS 741
LSLL+ R+RVDEAV F+ H+L+S PD C+FNTV+RGLC G V++AFE F+ M S
Sbjct: 186 LLSLLMKRSRVDEAVDFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGS 245
Query: 742 FGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKME 921
FGC PD VTYNTLINGLC VG V+RA LL +QL SP+VVTYTS+ISGYCK G+M+
Sbjct: 246 FGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLGRMD 305
Query: 922 DAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLV 1101
+A NL DEMI+ GI PNL T+N++I+GFGKIG++ SA+KMY KM + G+ PD+VT TSLV
Sbjct: 306 EAINLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLV 365
Query: 1102 DAHSRLGEMDYCVKLWDEMNERKV 1173
D + R GE+D +KLWD+MN R +
Sbjct: 366 DGYCRTGEVDQGLKLWDDMNSRNL 389
Score = 104 bits (259), Expect = 8e-21
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 34/346 (9%)
Frame = +1
Query: 211 PFVAYVVINHITHRLNNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
PFV +++ + R + + A FF++ L S L F+ ++R LCR+ D A
Sbjct: 180 PFVHNSLLSLLMKR-SRVDEAVDFFKHHILRSDRLFPDTCTFNTVIRGLCRVGGVDKAFE 238
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFL 567
++ M + G P+ + LI G+ A+ +L L Q G + +
Sbjct: 239 FFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLL---GNLQLQDGLSPDVVTYTSLI 295
Query: 568 SLLISRNRVDEAV-------------------VLFRGH--------------MLKSRSFA 648
S R+DEA+ +L G + + +
Sbjct: 296 SGYCKLGRMDEAINLMDEMISYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYP 355
Query: 649 PDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHEL 828
PD +F +++ G C +G+V++ +L+D M S P+L TY+ LI+ L + ++ A EL
Sbjct: 356 PDVVTFTSLVDGYCRTGEVDQGLKLWDDMNSRNLSPNLYTYSVLISALSKENRLNEAREL 415
Query: 829 LREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFG 1008
LR+++ + P Y V+ G+CK+G + +A + EM + G + T+ ++I G
Sbjct: 416 LRQLKSRDDIVPQPFLYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHC 475
Query: 1009 KIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKL 1146
G + AL +++KM+S G PD +T + L + G + K+
Sbjct: 476 MKGRMLEALAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKV 521
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Solanum lycopersicum] gi|723664227|ref|XP_010315007.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Solanum lycopersicum]
Length = 550
Score = 426 bits (1096), Expect = e-143
Identities = 215/382 (56%), Positives = 274/382 (71%), Gaps = 5/382 (1%)
Frame = +1
Query: 43 SKILSTALFHGQARLESSKASPA-----STLWFIKVVCTLCIRHSQSFVVFNSDYFREHL 207
S I A FHG L SSK+ P+ +WF KVVC LC HSQS VF SDYFR++L
Sbjct: 9 SNISLIARFHG---LTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNL 65
Query: 208 DPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
DP +A+ VI+HI LNNP LAF F + TR++LNLIH +F+LLLRSL +M HDSA L
Sbjct: 66 DPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLIHCIGSFNLLLRSLSQMGFHDSAML 125
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFL 567
V+ YM+ADG L N++L+ ++ + ANAGKF IA+ ILI++AEL + G P V N L
Sbjct: 126 VFKYMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGSIVRPFVHNSLL 185
Query: 568 SLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFG 747
SLL+ R+RVDEAV F+ H+L+S PD C+FNTV+RGLC G V++AFE F+ M SFG
Sbjct: 186 SLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFG 245
Query: 748 CHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDA 927
C PD VTYNTLINGLC VG V+RA LL +QL SP+VVTYTS+ISGYCK +M++A
Sbjct: 246 CSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDEA 305
Query: 928 ANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDA 1107
NL DEMI GI PNL T+N++I+GFGKIG++ SA+KMY KM + G+ PD+VT TSL+D
Sbjct: 306 INLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYPPDVVTFTSLIDG 365
Query: 1108 HSRLGEMDYCVKLWDEMNERKV 1173
+ R GE+D +KLWD+MN R +
Sbjct: 366 YCRTGELDQGLKLWDDMNSRNL 387
Score = 102 bits (255), Expect = 3e-20
Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 34/346 (9%)
Frame = +1
Query: 211 PFVAYVVINHITHRLNNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
PFV +++ + R + + A FF++ L S L F+ ++R LCR+ D A
Sbjct: 178 PFVHNSLLSLLMKR-SRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFE 236
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFL 567
++ M + G P+ + LI G+ A+ +L L Q G + +
Sbjct: 237 FFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLL---GNLQLQDGLSPDVVTYTSLI 293
Query: 568 SLLISRNRVDEAV-------------------VLFRGH--------------MLKSRSFA 648
S +R+DEA+ +L G + + +
Sbjct: 294 SGYCKLSRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMFSAIKMYGKMCAVGYP 353
Query: 649 PDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHEL 828
PD +F +++ G C +G++++ +L+D M S P+L T++ LI+ L + ++ A EL
Sbjct: 354 PDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEAREL 413
Query: 829 LREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFG 1008
LR+++ + P Y V+ G+CK+G + +A + EM + G + T+ ++I G
Sbjct: 414 LRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHC 473
Query: 1009 KIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKL 1146
G + AL +++KM+S G PD +T + L + G + K+
Sbjct: 474 MKGRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKEAYKV 519
>ref|XP_009615517.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123061|ref|XP_009615518.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123063|ref|XP_009615519.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123065|ref|XP_009615520.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
gi|697123067|ref|XP_009615521.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana tomentosiformis]
Length = 546
Score = 426 bits (1095), Expect = e-143
Identities = 209/369 (56%), Positives = 274/369 (74%), Gaps = 4/369 (1%)
Frame = +1
Query: 79 ARLESSKASPA---STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITH 249
AR +SK+ P+ +WF KVVC LC HSQS VF SD+FR++LDP +A+ VI+HI
Sbjct: 15 ARFHTSKSLPSYGPEAIWFTKVVCLLCFHHSQSLDVFTSDFFRQNLDPHIAFNVIHHINT 74
Query: 250 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 429
L NP LAF+FF++TR++LNLIH F+LLLRSLC+M HDSA LV+ YM+ADG+L ++
Sbjct: 75 NLRNPRLAFNFFKHTRVNLNLIHCIGTFNLLLRSLCQMGFHDSAMLVFKYMKADGVLLDS 134
Query: 430 ALLDFLIASFANAGKFRIAERILIAKAELCNQRGETF-SPSVCNKFLSLLISRNRVDEAV 606
++L+ ++ + ANAGKF IA+ ILI++AEL ++ G P V N LSLL+ RN+VD AV
Sbjct: 135 SILEIVVLALANAGKFGIAKEILISQAELGSEEGSVVVRPFVHNSLLSLLMKRNQVDGAV 194
Query: 607 VLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLIN 786
F+ H+L+S PD C+FN V+RGLC G V++AFE F+ M SF C PDLVTYNTLIN
Sbjct: 195 DFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMGSFDCFPDLVTYNTLIN 254
Query: 787 GLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIR 966
GLC VG VDRA LLR ++L +SP+VVTYTSVISGYCK G+M+DA NL DEMI GI
Sbjct: 255 GLCGVGQVDRARGLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDDAINLMDEMITYGIS 314
Query: 967 PNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKL 1146
PN+ T+N++I+GFGKIG++ SA KMYE+M + G PD+VT TSL+D H R G++D ++L
Sbjct: 315 PNMVTFNILINGFGKIGDMFSAQKMYERMCAFGCPPDVVTLTSLIDGHCRTGDLDQGLRL 374
Query: 1147 WDEMNERKV 1173
WDEMN R +
Sbjct: 375 WDEMNARNL 383
Score = 104 bits (260), Expect = 6e-21
Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 38/342 (11%)
Frame = +1
Query: 211 PFVAYVVINHITHRLNNPNLAFSFFR-YTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
PFV +++ + R N + A FF+ + S L F++++R LCR+ D A
Sbjct: 174 PFVHNSLLSLLMKR-NQVDGAVDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFE 232
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCN--K 561
++ M + P+ + LI G+ A R L+ EL + +SP V
Sbjct: 233 FFNDMGSFDCFPDLVTYNTLINGLCGVGQVDRA-RGLLRSLEL----QDGYSPDVVTYTS 287
Query: 562 FLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRS 741
+S R+D+A+ L + + +P+ +FN ++ G G + A ++++ M +
Sbjct: 288 VISGYCKLGRMDDAINLM--DEMITYGISPNMVTFNILINGFGKIGDMFSAQKMYERMCA 345
Query: 742 FGCHPDLVTYNTLINGLCRVGNVDR----------------------------------- 816
FGC PD+VT +LI+G CR G++D+
Sbjct: 346 FGCPPDVVTLTSLIDGHCRTGDLDQGLRLWDEMNARNLWPNLYTFSVLIGAMSKENRLNE 405
Query: 817 AHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVII 996
A LLR++ L + P Y V+ G+CK+G + +A + EM + G + FT+ ++I
Sbjct: 406 ARVLLRQLILRDDIVPQPFVYNPVLDGFCKAGNLNEANVIAAEMESKGCCHDKFTFTILI 465
Query: 997 DGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLG 1122
G G + A+ +Y+KM+S G PD +T T L + G
Sbjct: 466 LGHCMKGRMLEAMAIYDKMMSLGCVPDEITVTCLTSCLLKAG 507
>ref|XP_009783824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nicotiana sylvestris] gi|698470503|ref|XP_009783825.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Nicotiana sylvestris]
gi|698470507|ref|XP_009783826.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g06000
[Nicotiana sylvestris] gi|698470511|ref|XP_009783827.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Nicotiana sylvestris]
Length = 546
Score = 425 bits (1092), Expect = e-142
Identities = 208/369 (56%), Positives = 272/369 (73%), Gaps = 4/369 (1%)
Frame = +1
Query: 79 ARLESSKASPA---STLWFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITH 249
AR +SK+ P+ +WF KVVC LC HSQS VF SDYFR++LDP +A+ VI+HI
Sbjct: 15 ARFHTSKSLPSYGPEAIWFTKVVCLLCFHHSQSLDVFTSDYFRQNLDPHIAFNVIHHINT 74
Query: 250 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 429
LNNP LAF+FF++TR++LNL+H F+LLLRSLC+M HDSA LV+ YM+ADG L ++
Sbjct: 75 NLNNPRLAFNFFKHTRVNLNLVHCIGTFNLLLRSLCQMGFHDSATLVFKYMKADGFLLDS 134
Query: 430 ALLDFLIASFANAGKFRIAERILIAKAELCNQRGE-TFSPSVCNKFLSLLISRNRVDEAV 606
++L+ ++ + ANAGKF IA+ ILI++AEL + G P V N LSLL+ RN+VDEAV
Sbjct: 135 SILESVLLALANAGKFGIAKEILISQAELGSDEGSFVVRPFVHNSLLSLLMKRNQVDEAV 194
Query: 607 VLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLIN 786
F+ H+L+S PD C+FN V+RGLC G V++AFE F+ M SF C PD+VTYNTLIN
Sbjct: 195 DFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFEFFNDMGSFDCFPDIVTYNTLIN 254
Query: 787 GLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIR 966
GLC VG VDRA LLR ++L +SP+VVTYTSVISGYCK G+M+DA NL DEMI GI
Sbjct: 255 GLCGVGQVDRARSLLRSLELQDGYSPDVVTYTSVISGYCKLGRMDDAINLMDEMITYGIT 314
Query: 967 PNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKL 1146
P + T+N++I+GFGKIG++ SA MYE+M + G PD+VT TSL+D H R G++D ++L
Sbjct: 315 PTMVTFNILINGFGKIGDMFSAQNMYERMCAFGCPPDVVTFTSLIDGHCRTGDLDQGLRL 374
Query: 1147 WDEMNERKV 1173
WDEMN R +
Sbjct: 375 WDEMNTRNL 383
Score = 107 bits (267), Expect = 7e-22
Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 38/342 (11%)
Frame = +1
Query: 211 PFVAYVVINHITHRLNNPNLAFSFFR-YTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
PFV +++ + R N + A FF+ + S L F++++R LCR+ D A
Sbjct: 174 PFVHNSLLSLLMKR-NQVDEAVDFFKDHILRSERLFPDTCTFNIVIRGLCRVGGVDKAFE 232
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCN--K 561
++ M + P+ + LI G+ A R L+ EL + +SP V
Sbjct: 233 FFNDMGSFDCFPDIVTYNTLINGLCGVGQVDRA-RSLLRSLEL----QDGYSPDVVTYTS 287
Query: 562 FLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRS 741
+S R+D+A+ L + + P +FN ++ G G + A +++ M +
Sbjct: 288 VISGYCKLGRMDDAINLM--DEMITYGITPTMVTFNILINGFGKIGDMFSAQNMYERMCA 345
Query: 742 FGCHPDLVTYNTLINGLCRVGNVDR----------------------------------- 816
FGC PD+VT+ +LI+G CR G++D+
Sbjct: 346 FGCPPDVVTFTSLIDGHCRTGDLDQGLRLWDEMNTRNLWPNLYTFSVLIGALSRENRLNE 405
Query: 817 AHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVII 996
A ELLR++ L + P Y V+ G+CK+G + +A + EM + G + FT+ ++I
Sbjct: 406 ARELLRQLILRDDIVPQPFVYNPVLDGFCKAGNLNEANVIAAEMESKGCCHDKFTFTILI 465
Query: 997 DGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLG 1122
G G + A+ +Y+KM+S G PD +T + L + G
Sbjct: 466 LGHCMKGRMLEAMAIYDKMMSLGCAPDDITVSCLTSCLLKAG 507
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Solanum tuberosum] gi|565370447|ref|XP_006351832.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Solanum tuberosum]
Length = 550
Score = 424 bits (1090), Expect = e-142
Identities = 212/382 (55%), Positives = 275/382 (71%), Gaps = 5/382 (1%)
Frame = +1
Query: 43 SKILSTALFHGQARLESSKASPA-----STLWFIKVVCTLCIRHSQSFVVFNSDYFREHL 207
S IL A FHG L SSK+ P+ +WF KVVC LC HSQS VF SDYFR++L
Sbjct: 9 SNILLIARFHG---LTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDYFRQNL 65
Query: 208 DPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
DP +A+ VI+HI LNNP LAF F + TR++LNL+H +F+LLLRSL +M HDSA L
Sbjct: 66 DPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFHDSAML 125
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFL 567
V+ +M+ADG L N++L+ ++ + ANAGKF IA+ ILI++AEL + G P V N L
Sbjct: 126 VFKFMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGRIVRPFVHNSLL 185
Query: 568 SLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFG 747
SLL+ R+RVDEAV F+ H+L+S PD C+FNTV+RGLC G V++AFE F+ M SFG
Sbjct: 186 SLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFNDMGSFG 245
Query: 748 CHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDA 927
C PD VTYNTLINGLC VG V+RA LL ++L SP+VVTYTSVI+GYCK G+M++A
Sbjct: 246 CFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLGRMDEA 305
Query: 928 ANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDA 1107
NL DEM GI PNL T+N++I+GFGKIG++ SA++MY +M + G+ PD+VT TSL+D
Sbjct: 306 INLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVTFTSLIDG 365
Query: 1108 HSRLGEMDYCVKLWDEMNERKV 1173
+ R GE+D +KLWDEMN R +
Sbjct: 366 YCRTGELDQGLKLWDEMNTRNL 387
Score = 99.8 bits (247), Expect = 3e-19
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 36/348 (10%)
Frame = +1
Query: 211 PFVAYVVINHITHRLNNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHDSAKL 387
PFV +++ + R + + A FF++ L S L F+ ++R LCR+ D A
Sbjct: 178 PFVHNSLLSLLMKR-SRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFE 236
Query: 388 VYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCN--K 561
++ M + G P+ + LI + G+ A R L+ EL + SP V
Sbjct: 237 FFNDMGSFGCFPDTVTYNTLINGLCSVGQVNRA-RGLLGNLEL----QDGLSPDVVTYTS 291
Query: 562 FLSLLISRNRVDEAVVL-----------------------------FRGHMLKSR----S 642
++ R+DEA+ L F + R
Sbjct: 292 VIAGYCKLGRMDEAINLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVG 351
Query: 643 FAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAH 822
+ PD +F +++ G C +G++++ +L+D M + P+L T++ LI+ L + ++ A
Sbjct: 352 YPPDVVTFTSLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEAR 411
Query: 823 ELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDG 1002
ELLR+++ + P Y V+ G+CK+G + A + EM + G + T+ ++I G
Sbjct: 412 ELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTILILG 471
Query: 1003 FGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKL 1146
G + A+ +++KM+S G PD +T + L + G + K+
Sbjct: 472 HCMKGRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKV 519
>gb|KVI07821.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus var.
scolymus]
Length = 562
Score = 378 bits (970), Expect = e-124
Identities = 188/359 (52%), Positives = 248/359 (69%), Gaps = 4/359 (1%)
Frame = +1
Query: 109 ASTLWFIKVVCTLCIRHSQSFV-VFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFF 285
AS++WF+KVVCTL +R S V SDY R++L+ A+ VI H+ NNPNLAFSF
Sbjct: 46 ASSVWFVKVVCTLYVRRKSSVKEVRVSDYLRKNLNSLTAFSVIKHMNSNWNNPNLAFSFL 105
Query: 286 RYTRLSLNLIHSESAFDLLLRS---LCRMSLHDSAKLVYHYMEADGILPNNALLDFLIAS 456
YT+ +LNL+HS + LLRS + ++ +HD AK V M D +LP+++LL F+I S
Sbjct: 106 EYTKNTLNLVHSTETYSFLLRSFGYVTQVGVHDLAKKVIDLMRIDEVLPDSSLLGFVITS 165
Query: 457 FANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKS 636
F NAGKF +A+ +++ + ++ E S V NK LS L+ N +DEAV F +L+
Sbjct: 166 FVNAGKFEVAKELMVDHSRSSVEKDEVLSCVVFNKLLSSLVKSNHMDEAVSFFENIILRL 225
Query: 637 RSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDR 816
+ ++PD C+FN V+ LC + +V++AF +F+ MR FGC PDLVTYNTL+NG CR GNVD+
Sbjct: 226 KCYSPDACTFNIVISALCRAREVDKAFSIFNKMRKFGCFPDLVTYNTLLNGFCRAGNVDK 285
Query: 817 AHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVII 996
AHELLRE + SPNVVT+TSVISGYCK GKME+A LFD MI GIRPN T+NVII
Sbjct: 286 AHELLRETCMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFDNMIGHGIRPNTVTFNVII 345
Query: 997 DGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
DGFGKIG + S L MYEKMV G PD++T TS++D H RLGE+ +K+WDEMN R +
Sbjct: 346 DGFGKIGNMVSVLNMYEKMVDLGCTPDVITFTSIIDGHCRLGELQQGLKIWDEMNRRNL 404
Score = 119 bits (297), Expect = 8e-26
Identities = 94/370 (25%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Frame = +1
Query: 130 KVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRL---NNPNLAFSFFRYTRL 300
+V L + HS+S V D ++ VV N + L N+ + A SFF L
Sbjct: 173 EVAKELMVDHSRSSV---------EKDEVLSCVVFNKLLSSLVKSNHMDEAVSFFENIIL 223
Query: 301 SLNLIHSESA-FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKF 477
L ++ F++++ +LCR D A +++ M G P+ + L+ F AG
Sbjct: 224 RLKCYSPDACTFNIVISALCRAREVDKAFSIFNKMRKFGCFPDLVTYNTLLNGFCRAGNV 283
Query: 478 RIAERIL--IAKAELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFR---GHMLKSRS 642
A +L + C+ TF+ SV + + L +++EA+VLF GH ++ +
Sbjct: 284 DKAHELLRETCMVDGCSPNVVTFT-SVISGYCKL----GKMEEAMVLFDNMIGHGIRPNT 338
Query: 643 FA------------------------------PDNCSFNTVMRGLCMSGKVEEAFELFDV 732
PD +F +++ G C G++++ +++D
Sbjct: 339 VTFNVIIDGFGKIGNMVSVLNMYEKMVDLGCTPDVITFTSIIDGHCRLGELQQGLKIWDE 398
Query: 733 MRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSG 912
M +P++ T++ LIN LC G ++ A +LLR+++ + P Y VI G+CK+G
Sbjct: 399 MNRRNLYPNIYTFSILINTLCEKGRLNEACDLLRQLKKRDDIVPKTFVYIPVIDGFCKAG 458
Query: 913 KMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTST 1092
++ A + EM +P+ T+ ++I G G + A+ +++KM+ G PD VT
Sbjct: 459 NVDKANAIVKEMEEKRCKPDKVTFTILIIGHCMKGRMIEAISLFQKMLVVGCVPDSVTVN 518
Query: 1093 SLVDAHSRLG 1122
SLV + G
Sbjct: 519 SLVSRLLKAG 528
>gb|KVI07824.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus var.
scolymus]
Length = 557
Score = 363 bits (932), Expect = e-118
Identities = 179/356 (50%), Positives = 246/356 (69%), Gaps = 1/356 (0%)
Frame = +1
Query: 109 ASTLWFIKVVCTLCIRHSQSFV-VFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFF 285
A+++WF+KVVCTL +R S V DY R++L+ A+ VI H++ NNP LAFSF
Sbjct: 44 ATSVWFVKVVCTLYVRRKSSMEEVRILDYLRKNLNSLTAFSVIEHMSSNWNNPKLAFSFL 103
Query: 286 RYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFAN 465
YT+ +LNL+ S + LLRS ++ +HD AKL+ M DG+ P+N+LL F+I SF N
Sbjct: 104 EYTKNTLNLVPSIETYSFLLRSFSQVGVHDLAKLLIDLMRIDGVSPDNSLLGFVIKSFVN 163
Query: 466 AGKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSF 645
AGKF +A+ +++ + ++ S V NK LS L+ N+VDEAV F +L+S+ +
Sbjct: 164 AGKFEVAKELIVDSSRSSVEKDGVLSCIVVNKILSSLVKSNQVDEAVAFFENIILRSQCY 223
Query: 646 APDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHE 825
+ + +FN V+ GLC + +V++AF F+ MR FGC PD+VTYNTL+NG CR GNV++AH+
Sbjct: 224 SHNAYTFNIVISGLCRAREVDKAFGFFNHMRMFGCLPDVVTYNTLLNGFCRAGNVNKAHD 283
Query: 826 LLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGF 1005
LLRE + SPNVVT+TSVISGYCK GKME+A LF +MI+ GI P+ FT+NVIIDGF
Sbjct: 284 LLRETSMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFSDMISHGIXPSTFTFNVIIDGF 343
Query: 1006 GKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
GKIG + S L MYEKMV G PD++T TS++D H RLGE+ +K+WDEMN R +
Sbjct: 344 GKIGNMVSVLNMYEKMVDHGCTPDVITFTSIIDGHCRLGEVHQGLKIWDEMNRRNL 399
Score = 126 bits (317), Expect = 2e-28
Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 7/324 (2%)
Frame = +1
Query: 208 DPFVAYVVINHITHRL---NNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHD 375
D ++ +V+N I L N + A +FF L S H+ F++++ LCR D
Sbjct: 185 DGVLSCIVVNKILSSLVKSNQVDEAVAFFENIILRSQCYSHNAYTFNIVISGLCRAREVD 244
Query: 376 SAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERIL--IAKAELCNQRGETFSPS 549
A +++M G LP+ + L+ F AG A +L + + C+ TF+ S
Sbjct: 245 KAFGFFNHMRMFGCLPDVVTYNTLLNGFCRAGNVNKAHDLLRETSMVDGCSPNVVTFT-S 303
Query: 550 VCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFD 729
V + + L +++EA+VLF + S P +FN ++ G G + +++
Sbjct: 304 VISGYCKL----GKMEEAMVLFSDMI--SHGIXPSTFTFNVIIDGFGKIGNMVSVLNMYE 357
Query: 730 VMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKS 909
M GC PD++T+ ++I+G CR+G V + ++ E+ + + PN+ T++ +I+ CK
Sbjct: 358 KMVDHGCTPDVITFTSIIDGHCRLGEVHQGLKIWDEMNRRNLY-PNIYTFSILINTLCKZ 416
Query: 910 GKMEDAANLFDEMIN-CGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVT 1086
++ +A +L ++ I P F YN +IDGF K G V A + ++M +PD +T
Sbjct: 417 XRLNEARDLLXQLKKRXDIIPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEKRCYPDKLT 476
Query: 1087 STSLVDAHSRLGEMDYCVKLWDEM 1158
T L+ H G M + L+ +M
Sbjct: 477 FTILIIGHCMKGRMIEAISLFQKM 500
Score = 58.5 bits (140), Expect = 8e-06
Identities = 43/166 (25%), Positives = 72/166 (43%)
Frame = +1
Query: 331 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKA 510
F ++ CR+ ++ M + PN LI + + A +L
Sbjct: 371 FTSIIDGHCRLGEVHQGLKIWDEMNRRNLYPNIYTFSILINTLCKZXRLNEARDLLXQLK 430
Query: 511 ELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 690
+ + + F V N + VDEA V+ + M + R + PD +F ++ G C
Sbjct: 431 KRXDIIPKAF---VYNPVIDGFCKAGNVDEANVIVK-EMEEKRCY-PDKLTFTILIIGHC 485
Query: 691 MSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHEL 828
M G++ EA LF M GC PD +T N+L++ L + G + A E+
Sbjct: 486 MKGRMIEAISLFQKMIVXGCAPDSITVNSLVSRLLKAGMLKEAFEI 531
>ref|XP_010276672.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Nelumbo nucifera]
Length = 586
Score = 355 bits (911), Expect = e-115
Identities = 181/351 (51%), Positives = 240/351 (68%)
Frame = +1
Query: 121 WFIKVVCTLCIRHSQSFVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRL 300
W +KV+CTLC+R S DYF ++L+P +AY VI RL NPNL+ F ++R+
Sbjct: 85 WVVKVICTLCVRSSSLDTCL--DYFSKNLNPSIAYEVIK----RLRNPNLSLKLFEFSRV 138
Query: 301 SLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFR 480
L + HS ++ L++SL M LHD+AK+V+ M DG LP++++L FL++S A AGK
Sbjct: 139 KLEIRHSVRTYNFLVKSLSEMGLHDAAKVVFDCMRNDGHLPDSSILAFLLSSCARAGKLD 198
Query: 481 IAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNC 660
I + ++ L N G +P V N L +L+ NRV EAV L R H+ S F PD C
Sbjct: 199 ITKSLI--SQVLGN--GIEVNPFVYNNLLEILVKSNRVQEAVCLLREHL--SSCFRPDTC 252
Query: 661 SFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREI 840
+FN V++GLC G+V+ AFE+FD M SFGC PD+VTYNTLINGLCR +VDR H LL EI
Sbjct: 253 TFNIVIKGLCRIGEVDRAFEIFDDMGSFGCCPDVVTYNTLINGLCRASDVDRGHRLLMEI 312
Query: 841 QLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGE 1020
Q +S+FS +VVTYTS+I GYCK GKME+A+NL+DEM+ G PN+ TYN +IDGF KIGE
Sbjct: 313 QSNSKFSLDVVTYTSLIKGYCKLGKMEEASNLYDEMVRSGTEPNVITYNTLIDGFSKIGE 372
Query: 1021 VASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
V SA+ MYEK++ G PD+VT TSL+DAH R G++D +KLW EM R +
Sbjct: 373 VGSAMVMYEKLLLQGCFPDVVTFTSLIDAHCRSGQIDEGIKLWHEMQTRNI 423
Score = 90.1 bits (222), Expect = 5e-16
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Frame = +1
Query: 313 IHSESAFDL-------LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAG 471
I S S F L L++ C++ + A +Y M G PN + LI F+ G
Sbjct: 312 IQSNSKFSLDVVTYTSLIKGYCKLGKMEEASNLYDEMVRSGTEPNVITYNTLIDGFSKIG 371
Query: 472 KFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAP 651
+ V A+V++ +L+ P
Sbjct: 372 E---------------------------------------VGSAMVMYEKLLLQG--CFP 390
Query: 652 DNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELL 831
D +F +++ C SG+++E +L+ M++ P+ T++ LIN LC+ ++ A LL
Sbjct: 391 DVVTFTSLIDAHCRSGQIDEGIKLWHEMQTRNISPNAHTFHVLINSLCKENRLNEARGLL 450
Query: 832 REIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGK 1011
R+++ ++ P Y VI G+CK+G +++A + EM + + +T+ ++I G
Sbjct: 451 RQLKW-TDIVPQAFVYNPVIDGFCKAGNIDEANAIVAEMEEKRCKLDTYTFTILIIGHCM 509
Query: 1012 IGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLG 1122
G++ A+ ++ KM++ PD +T +L + G
Sbjct: 510 KGKMHEAINIFHKMLNSNCPPDTITVQALTSCLFKAG 546
>gb|KVI07848.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus var.
scolymus]
Length = 746
Score = 360 bits (923), Expect = e-115
Identities = 177/352 (50%), Positives = 241/352 (68%), Gaps = 1/352 (0%)
Frame = +1
Query: 109 ASTLWFIKVVCTLCIRHSQSFV-VFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFF 285
A+++WF+KVVCTL +R S V DY R++L+ A+ VI H+ NNP LAFSF
Sbjct: 159 ATSVWFVKVVCTLYVRRKSSMEEVRILDYLRKNLNSLTAFSVIEHMNSNWNNPKLAFSFL 218
Query: 286 RYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFAN 465
YT+ +LNL+H + LLRS ++ HD AKL+ M +G+ P+ +LL F+I SF N
Sbjct: 219 EYTKNTLNLVHLIETYSFLLRSFSQVGXHDLAKLLIDLMRIBGVSPDXSLLGFVIKSFVN 278
Query: 466 AGKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSF 645
AGKF +A+ +++ + ++ S V NK LS L+ NRVDEAV F +L+S+ +
Sbjct: 279 AGKFEVAKELIVDSSRSSVEKDGVLSCIVVNKILSSLVKSNRVDEAVAFFENIILRSQCY 338
Query: 646 APDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHE 825
+ + +FN V+ GLC + +V++AF F+ MR FGC PD+VTYNTL+NG CR GNV++AH+
Sbjct: 339 SHNAYTFNIVISGLCRAREVDKAFGFFNHMRKFGCLPDVVTYNTLLNGFCRAGNVNKAHD 398
Query: 826 LLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGF 1005
LLRE + SPNVVT+TSVISGYCK GKME+A LF +MI+ GI P+ FT+NVIIDGF
Sbjct: 399 LLRETSMVDGCSPNVVTFTSVISGYCKLGKMEEAMVLFSDMISHGIXPSTFTFNVIIDGF 458
Query: 1006 GKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLGEMDYCVKLWDEMN 1161
GKIG + S L MYEKMV G PD++T TS++D H RLGE+ +K+WDEMN
Sbjct: 459 GKIGNMVSVLNMYEKMVDHGCTPDVITFTSIIDGHCRLGEVHQGLKIWDEMN 510
Score = 126 bits (316), Expect = 5e-28
Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 7/324 (2%)
Frame = +1
Query: 208 DPFVAYVVINHITHRL---NNPNLAFSFFRYTRL-SLNLIHSESAFDLLLRSLCRMSLHD 375
D ++ +V+N I L N + A +FF L S H+ F++++ LCR D
Sbjct: 300 DGVLSCIVVNKILSSLVKSNRVDEAVAFFENIILRSQCYSHNAYTFNIVISGLCRAREVD 359
Query: 376 SAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERIL--IAKAELCNQRGETFSPS 549
A +++M G LP+ + L+ F AG A +L + + C+ TF+ S
Sbjct: 360 KAFGFFNHMRKFGCLPDVVTYNTLLNGFCRAGNVNKAHDLLRETSMVDGCSPNVVTFT-S 418
Query: 550 VCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFD 729
V + + L +++EA+VLF + S P +FN ++ G G + +++
Sbjct: 419 VISGYCKL----GKMEEAMVLFSDMI--SHGIXPSTFTFNVIIDGFGKIGNMVSVLNMYE 472
Query: 730 VMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKS 909
M GC PD++T+ ++I+G CR+G V + ++ E+ + + PN+ T++ +I+ CK
Sbjct: 473 KMVDHGCTPDVITFTSIIDGHCRLGEVHQGLKIWDEMNRXNLY-PNIYTFSILINTLCKE 531
Query: 910 GKMEDAANLFDEMIN-CGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVT 1086
++ +A +L ++ I P F YN +IDGF K G V A + ++M +PD +T
Sbjct: 532 NRLNEARDLLRQLKKRSDIIPKAFVYNPVIDGFCKAGNVDEANVIVKEMEEKRCYPDKLT 591
Query: 1087 STSLVDAHSRLGEMDYCVKLWDEM 1158
T L+ H G M + L+ +M
Sbjct: 592 FTILIIGHCMKGRMIEAISLFQKM 615
Score = 58.5 bits (140), Expect = 9e-06
Identities = 43/166 (25%), Positives = 72/166 (43%)
Frame = +1
Query: 331 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKA 510
F ++ CR+ ++ M + PN LI + + A +L
Sbjct: 486 FTSIIDGHCRLGEVHQGLKIWDEMNRXNLYPNIYTFSILINTLCKENRLNEARDLLRQLK 545
Query: 511 ELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 690
+ + + F V N + VDEA V+ + M + R + PD +F ++ G C
Sbjct: 546 KRSDIIPKAF---VYNPVIDGFCKAGNVDEANVIVK-EMEEKRCY-PDKLTFTILIIGHC 600
Query: 691 MSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHEL 828
M G++ EA LF M GC PD +T N+L++ L + G + A E+
Sbjct: 601 MKGRMIEAISLFQKMIVVGCAPDSITVNSLVSRLLKAGMLKEAFEI 646
>ref|XP_008388776.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Malus domestica]
Length = 593
Score = 344 bits (883), Expect = e-110
Identities = 185/388 (47%), Positives = 254/388 (65%), Gaps = 4/388 (1%)
Frame = +1
Query: 22 RAQRVSISKILSTALFHGQAR---LESSKASPASTLWFIKVVCTLCIR-HSQSFVVFNSD 189
RA +++IS S A HG AR L + + +WF+KVVCTL +R HS +
Sbjct: 61 RASKIAISHFHSLA--HGGARPRPLYDFEVTSNPEVWFVKVVCTLFLRSHS-----LDLG 113
Query: 190 YFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSL 369
Y ++L P +A+ VI RLNNP L FF +R+SL++ HS ++ LLRSLC+M L
Sbjct: 114 YLSKNLSPSIAFEVIK----RLNNPKLGLKFFELSRVSLSVKHSVWTYNFLLRSLCQMGL 169
Query: 370 HDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPS 549
DSAKLV+ YM +DG P++++++ L++S+A GK AE+ L C + P
Sbjct: 170 QDSAKLVFDYMRSDGHTPDDSVVELLVSSYAQMGKLDDAEKFL--NEAHCGEI--RLPPF 225
Query: 550 VCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFD 729
V N ++L+ +N+VDEAV LFR HM PDN +FN ++RGLC G++++AFELF
Sbjct: 226 VYNNLFNVLVXQNKVDEAVCLFRKHM--GSHXXPDNWTFNILIRGLCRVGEIDKAFELFS 283
Query: 730 VMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKS 909
M S GC+PD+VTYNTLI+GLCR VDR +LL+E+Q E SP+V+T+TSVISGYCK
Sbjct: 284 DMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDVITFTSVISGYCKL 343
Query: 910 GKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTS 1089
GKME+A LFDEMIN G+RP T+N +IDGFGK G + SAL M++KM+ G+H D+ T
Sbjct: 344 GKMEEAXVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYHSDVFTF 403
Query: 1090 TSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
TSL+D H R G++ +KLW EMN + V
Sbjct: 404 TSLIDGHCRAGKLSQGLKLWQEMNGKNV 431
Score = 102 bits (255), Expect = 3e-20
Identities = 81/323 (25%), Positives = 140/323 (43%), Gaps = 1/323 (0%)
Frame = +1
Query: 205 LDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAK 384
L PFV + N + + N + A FR + + F++L+R LCR+ D A
Sbjct: 222 LPPFVYNNLFNVLVXQ-NKVDEAVCLFR-KHMGSHXXPDNWTFNILIRGLCRVGEIDKAF 279
Query: 385 LVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKF 564
++ M + G P+ + LI+ A
Sbjct: 280 ELFSDMGSSGCYPDIVTYNTLISGLCRA-------------------------------- 307
Query: 565 LSLLISRNRVDEAVVLFRGHMLKSR-SFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRS 741
N VD L + ++SR +PD +F +V+ G C GK+EEA LFD M +
Sbjct: 308 -------NEVDRGFQLLKE--VQSRIELSPDVITFTSVISGYCKLGKMEEAXVLFDEMIN 358
Query: 742 FGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKME 921
G P VT+N +I+G + GN+ A + +++ H S +V T+TS+I G+C++GK+
Sbjct: 359 AGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYHS-DVFTFTSLIDGHCRAGKLS 417
Query: 922 DAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLV 1101
L+ EM + P+ +T++V+I+ K + A ++ P ++
Sbjct: 418 QGLKLWQEMNGKNVSPSAYTFSVLINALCKESRLHEARDFLRQLKWSNVVPKPFIYNPVI 477
Query: 1102 DAHSRLGEMDYCVKLWDEMNERK 1170
D + G +D + EM E++
Sbjct: 478 DGFCKAGNVDEANAIVAEMEEKR 500
>ref|XP_010656116.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Vitis vinifera] gi|731406320|ref|XP_010656117.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g06000 [Vitis vinifera]
Length = 571
Score = 342 bits (878), Expect = e-110
Identities = 190/395 (48%), Positives = 255/395 (64%), Gaps = 5/395 (1%)
Frame = +1
Query: 4 LIIMRFRAQRVSISKILSTALFHGQARLESSKASPASTL----WFIKVVCTLCIR-HSQS 168
L++ R RV SKI + A FH A + S+ P W +KV+CTLC+R HS
Sbjct: 35 LLLFITRPSRVRASKI-AIAQFHEHA-VGISRNRPEVIQNPENWIVKVICTLCVRTHSLD 92
Query: 169 FVVFNSDYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLR 348
+ DYF + L P +A+ V+ LNNP LA FF+ +R++LNL HS + LLR
Sbjct: 93 ACL---DYFSKTLTPSIAFEVVRG----LNNPELALKFFQLSRVNLNLCHSFRTYSFLLR 145
Query: 349 SLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQR 528
SL M H+SAK VY M DG P+ ++L FL++S +AGKF IA +
Sbjct: 146 SLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWV---------D 196
Query: 529 GETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVE 708
G FS V NK L+ L+ N+VDEAV FR M F D+CSFN ++RGLC GKV+
Sbjct: 197 GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPF--DSCSFNILIRGLCRIGKVD 254
Query: 709 EAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSV 888
+AFELF+ MR FGC PD++TYNTLING CRV VDR H+LL+E+ ++ SP+VVTYTS+
Sbjct: 255 KAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSI 314
Query: 889 ISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGF 1068
ISGYCK GKME A+ LF+ MI+ GI+PN FT+N++I+GFGK+G++ SA MYE+M+ G
Sbjct: 315 ISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGC 374
Query: 1069 HPDIVTSTSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
PDI+T TSL+D H R G+++ +KLW E+N R +
Sbjct: 375 PPDIITFTSLIDGHCRTGKVERSLKLWHELNARNL 409
Score = 87.8 bits (216), Expect = 3e-15
Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 3/247 (1%)
Frame = +1
Query: 340 LLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELC 519
++ C++ + A ++++ M + GI PN + LI F G AE + L
Sbjct: 314 IISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLG 373
Query: 520 NQRGETFSPSVCNKFLSLLISRNR---VDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 690
P F SL+ R V+ ++ L+ H L +R+ +P+ +F + LC
Sbjct: 374 -------CPPDIITFTSLIDGHCRTGKVERSLKLW--HELNARNLSPNEYTFAILTNALC 424
Query: 691 MSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNV 870
++ EA ++ YN +I+G C+ GNVD A+ +L E++ P+
Sbjct: 425 KENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEME-EKRCKPDK 483
Query: 871 VTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEK 1050
+TYT +I G+C G++ +A ++F+ M+ G P+ T +I K G A ++ +
Sbjct: 484 ITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQ- 542
Query: 1051 MVSDGFH 1071
+ S+ F+
Sbjct: 543 IASEDFN 549
>ref|XP_009337222.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Pyrus x bretschneideri]
Length = 597
Score = 342 bits (878), Expect = e-109
Identities = 184/388 (47%), Positives = 255/388 (65%), Gaps = 4/388 (1%)
Frame = +1
Query: 22 RAQRVSISKILSTALFHGQAR---LESSKASPASTLWFIKVVCTLCIR-HSQSFVVFNSD 189
RA +++IS S A HG AR L + + +WF+KVVCTL +R HS +
Sbjct: 65 RASKIAISHFHSLA--HGGARPRPLYDFEVTSNPEVWFVKVVCTLFLRSHS-----LDLG 117
Query: 190 YFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSL 369
Y ++L P +A+ VI RLNNP L FF +R+SL++ HS ++ LLRSLC+M L
Sbjct: 118 YLSKNLSPSIAFEVIK----RLNNPKLGLKFFELSRVSLSVKHSVWTYNFLLRSLCQMGL 173
Query: 370 HDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPS 549
DSAKLV+ YM +DG P++++++ L++S+A GK AE+ L C + P
Sbjct: 174 QDSAKLVFDYMRSDGHTPDDSVVELLVSSYAQIGKLDDAEKFL--DEAHCGEI--RLPPF 229
Query: 550 VCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFD 729
V N ++L+ +N+VDEAV LFR HM PDN +FN ++RGLC G++++AFELF
Sbjct: 230 VYNNLFNVLVKQNKVDEAVSLFRKHM--GSHCHPDNWTFNILIRGLCRVGEIDKAFELFS 287
Query: 730 VMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKS 909
M S GC+PD+VTYNTLI+GLCR VDR +LL+E+Q E SP+V+T+TSVISGYCK
Sbjct: 288 DMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQSRIELSPDVITFTSVISGYCKL 347
Query: 910 GKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTS 1089
GKME+A+ LFDEMI+ G+RP T+N +IDGFGK G + SAL M++KM+ G+H D+ T
Sbjct: 348 GKMEEASVLFDEMISAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYHSDVFTF 407
Query: 1090 TSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
TSL+D H R G++ +KLW EMN + V
Sbjct: 408 TSLIDGHCRAGQLSQGLKLWQEMNGKNV 435
Score = 103 bits (256), Expect = 2e-20
Identities = 84/324 (25%), Positives = 150/324 (46%), Gaps = 6/324 (1%)
Frame = +1
Query: 205 LDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAK 384
L PFV Y + ++ + N + A S FR + + F++L+R LCR+ D A
Sbjct: 226 LPPFV-YNNLFNVLVKQNKVDEAVSLFR-KHMGSHCHPDNWTFNILIRGLCRVGEIDKAF 283
Query: 385 LVYHYMEADGILPNNALLDFLIASFANAGK----FRIAERILIAKAELCNQRGETFSPSV 552
++ M + G P+ + LI+ A + F++ + + ++ EL SP V
Sbjct: 284 ELFSDMGSSGCYPDIVTYNTLISGLCRANEVDRGFQLLKEVQ-SRIEL--------SPDV 334
Query: 553 CN--KFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELF 726
+S +++EA VLF + S P + +FN ++ G +G + A +
Sbjct: 335 ITFTSVISGYCKLGKMEEASVLF--DEMISAGVRPTSVTFNAMIDGFGKTGNMGSALAMH 392
Query: 727 DVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCK 906
M G H D+ T+ +LI+G CR G + + +L +E+ SP+ T++ +I+ C+
Sbjct: 393 QKMLFHGYHSDVFTFTSLIDGHCRAGQLSQGLKLWQEMN-GKNVSPSAYTFSVLINALCR 451
Query: 907 SGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVT 1086
++ +A + ++ + P F YN +IDGF K G V A + +M PD VT
Sbjct: 452 ESRLHEARDFLRQLKWSNVVPKPFIYNPVIDGFCKAGNVDEANAIVAEMEEKRCSPDKVT 511
Query: 1087 STSLVDAHSRLGEMDYCVKLWDEM 1158
T L+ + G M + + +M
Sbjct: 512 FTILILGNCMKGRMSEAISNFKKM 535
>ref|XP_015889017.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Ziziphus jujuba]
Length = 595
Score = 342 bits (877), Expect = e-109
Identities = 183/389 (47%), Positives = 259/389 (66%), Gaps = 5/389 (1%)
Frame = +1
Query: 22 RAQRVSISKILSTALFHGQAR----LESSKASPASTLWFIKVVCTLCIR-HSQSFVVFNS 186
RA +++I+ A HG +R + S WF+KVV TL IR HS +
Sbjct: 61 RASKIAIANFHGLA--HGGSRPRRAFHDREVISNSETWFLKVVYTLFIRSHSLDSCL--- 115
Query: 187 DYFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMS 366
Y ++L P +A+ VI RLNNP+L FF +TR++L++ H ++ L+RSLC+M
Sbjct: 116 GYLHKNLTPSIAFEVIK----RLNNPSLGLKFFEFTRMNLSINHKFRTYNFLMRSLCQMG 171
Query: 367 LHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSP 546
LH SAKLV+ M +DG P++++++FL+ S+A GK IA ++L E + +
Sbjct: 172 LHGSAKLVFDCMRSDGHSPDDSIIEFLVVSYAQIGKLDIAVKML----EEVHCDAVKVAV 227
Query: 547 SVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELF 726
V N LS+L+ RN+VDEAV LFR + + F PDN + NT+++GLC G+V++AFE F
Sbjct: 228 VVYNSLLSVLVRRNQVDEAVSLFRKFV--ASHFRPDNWTCNTLVKGLCGVGEVDKAFEFF 285
Query: 727 DVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCK 906
+ M SFGC PD+VTYNTLINGLCR VD+ LL+E+QL E SPNV+T+TSVISGYCK
Sbjct: 286 NDMGSFGCSPDVVTYNTLINGLCRTNEVDKGCRLLKEVQLRRELSPNVITFTSVISGYCK 345
Query: 907 SGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVT 1086
G+M++A+ LFDEM + G++PN T+N +IDGFGK GE+ASAL MYEKMVS G+ PD+VT
Sbjct: 346 LGRMDEASILFDEMCSSGVKPNDVTFNALIDGFGKAGELASALAMYEKMVSHGYQPDVVT 405
Query: 1087 STSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
TSL++ + R G++ + + LW EMN +K+
Sbjct: 406 FTSLINGYCRAGQLSHGLNLWHEMNAKKI 434
Score = 109 bits (273), Expect = 1e-22
Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 39/315 (12%)
Frame = +1
Query: 331 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKA 510
++ LL L R + D A ++ A P+N + L+ G+ + KA
Sbjct: 230 YNSLLSVLVRRNQVDEAVSLFRKFVASHFRPDNWTCNTLVKGLCGVGE--------VDKA 281
Query: 511 -ELCNQRGET-FSPSVC--NKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVM 678
E N G SP V N ++ L N VD+ L + L+ R +P+ +F +V+
Sbjct: 282 FEFFNDMGSFGCSPDVVTYNTLINGLCRTNEVDKGCRLLKEVQLR-RELSPNVITFTSVI 340
Query: 679 RGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEF 858
G C G+++EA LFD M S G P+ VT+N LI+G + G + A + ++ H +
Sbjct: 341 SGYCKLGRMDEASILFDEMCSSGVKPNDVTFNALIDGFGKAGELASALAMYEKMVSHG-Y 399
Query: 859 SPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNV---------------- 990
P+VVT+TS+I+GYC++G++ NL+ EM I PN +T+NV
Sbjct: 400 QPDVVTFTSLINGYCRAGQLSHGLNLWHEMNAKKIFPNGYTFNVLIHALCKDNRLDEARD 459
Query: 991 -------------------IIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHS 1113
+IDGF K G V A + +M G PD T T L+ +
Sbjct: 460 FLRQLKWSNIVPKPFMYNPVIDGFCKAGNVDEANIIVAEMEEKGCRPDKCTFTILILGNC 519
Query: 1114 RLGEMDYCVKLWDEM 1158
G M + L+ +M
Sbjct: 520 MKGRMFEAIDLFKKM 534
Score = 101 bits (252), Expect = 7e-20
Identities = 67/291 (23%), Positives = 124/291 (42%)
Frame = +1
Query: 250 RLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAKLVYHYMEADGILPNN 429
R N + + +L L + F ++ C++ D A +++ M + G+ PN+
Sbjct: 309 RTNEVDKGCRLLKEVQLRRELSPNVITFTSVISGYCKLGRMDEASILFDEMCSSGVKPND 368
Query: 430 ALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKFLSLLISRNRVDEAVV 609
+ LI F AG+ A
Sbjct: 369 VTFNALIDGFGKAGEL-----------------------------------------ASA 387
Query: 610 LFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLING 789
L + S + PD +F +++ G C +G++ L+ M + P+ T+N LI+
Sbjct: 388 LAMYEKMVSHGYQPDVVTFTSLINGYCRAGQLSHGLNLWHEMNAKKIFPNGYTFNVLIHA 447
Query: 790 LCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRP 969
LC+ +D A + LR+++ S P Y VI G+CK+G +++A + EM G RP
Sbjct: 448 LCKDNRLDEARDFLRQLKW-SNIVPKPFMYNPVIDGFCKAGNVDEANIIVAEMEEKGCRP 506
Query: 970 NLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLG 1122
+ T+ ++I G G + A+ +++KM++ G PD +T + L+ + G
Sbjct: 507 DKCTFTILILGNCMKGRMFEAIDLFKKMLAVGCAPDYITVSCLISCLLKAG 557
Score = 64.3 bits (155), Expect = 1e-07
Identities = 43/166 (25%), Positives = 70/166 (42%)
Frame = +1
Query: 331 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKA 510
F L+ CR ++H M A I PN + LI + + A L
Sbjct: 406 FTSLINGYCRAGQLSHGLNLWHEMNAKKIFPNGYTFNVLIHALCKDNRLDEARDFL---- 461
Query: 511 ELCNQRGETFSPSVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLC 690
P + N + VDEA ++ ++ + PD C+F ++ G C
Sbjct: 462 RQLKWSNIVPKPFMYNPVIDGFCKAGNVDEANIIVAE--MEEKGCRPDKCTFTILILGNC 519
Query: 691 MSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHEL 828
M G++ EA +LF M + GC PD +T + LI+ L + G + A+ +
Sbjct: 520 MKGRMFEAIDLFKKMLAVGCAPDYITVSCLISCLLKAGMPNEAYHI 565
>emb|CDO97508.1| unnamed protein product [Coffea canephora]
Length = 322
Score = 332 bits (850), Expect = e-109
Identities = 167/329 (50%), Positives = 226/329 (68%)
Frame = +1
Query: 25 AQRVSISKILSTALFHGQARLESSKASPASTLWFIKVVCTLCIRHSQSFVVFNSDYFREH 204
++++++ I T FHG S A T+WFIKV H
Sbjct: 9 SKKIALKSI--TRCFHGTPAQFESHLPKAETIWFIKV----------------------H 44
Query: 205 LDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAK 384
L+P +A+ VI HI + +NP LAF FF++TRL+L+L+HS S F+LLL SLC++ D A+
Sbjct: 45 LNPSIAFFVIQHINNHFSNPRLAFEFFQFTRLNLSLVHSVSTFNLLLMSLCQIGFFDLAQ 104
Query: 385 LVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCNKF 564
L+ Y DG+L + ++++FL++ FANAGKFRI + +LI++A L +++ E S N
Sbjct: 105 LMLDYTITDGLLLDGSVVEFLVSCFANAGKFRICKEVLISQANLSSEKEEVVSSFAHNIL 164
Query: 565 LSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSF 744
LS+L+ RNRVDEAV F+ H+L R F PD CSFN V+RGLC G+V++AF+LF M SF
Sbjct: 165 LSMLVKRNRVDEAVQFFQDHILILRGFCPDTCSFNIVIRGLCKGGQVDKAFQLFYDMGSF 224
Query: 745 GCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMED 924
GC PD++TYN+LINGLC VGN+DRA LLR+IQ +P+VVTYTS+ISG CKSGKME+
Sbjct: 225 GCSPDMITYNSLINGLCTVGNLDRALCLLRDIQSQVGVAPDVVTYTSIISGLCKSGKMEE 284
Query: 925 AANLFDEMINCGIRPNLFTYNVIIDGFGK 1011
AA+L DEM+ CGIRPNL T+NV+IDGFGK
Sbjct: 285 AASLLDEMVQCGIRPNLITFNVLIDGFGK 313
>ref|XP_009359734.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Pyrus x bretschneideri]
Length = 547
Score = 338 bits (867), Expect = e-108
Identities = 184/388 (47%), Positives = 252/388 (64%), Gaps = 4/388 (1%)
Frame = +1
Query: 22 RAQRVSISKILSTALFHGQAR---LESSKASPASTLWFIKVVCTLCIR-HSQSFVVFNSD 189
RA ++++S + A HG AR L + + WF+KVVCTL +R HS V
Sbjct: 15 RASKIAVSHFHNLA--HGGARPRPLHDFEVTSNPEAWFVKVVCTLFLRSHSLDLV----- 67
Query: 190 YFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSL 369
Y ++L P A+ VI RLNNP L FF +R+SL++ HS ++ LLRSLC+M L
Sbjct: 68 YLSKNLSPSTAFEVIK----RLNNPILGLKFFELSRVSLSVNHSVWTYNFLLRSLCQMGL 123
Query: 370 HDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPS 549
DSAKLV+ YM +DG P+++ ++ L++S+A GK AE+ L C++ T P
Sbjct: 124 QDSAKLVFDYMRSDGHTPDDSAVELLVSSYAQMGKLDNAEKFL--DEVHCDEIRLT--PF 179
Query: 550 VCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFD 729
V N ++L+ +N+ DEAV LFR HM PD+ +FN ++RGLC G+V++AFELF
Sbjct: 180 VYNNLFNVLVQQNKADEAVYLFRKHMWSH--CRPDSWTFNILIRGLCRVGEVDKAFELFS 237
Query: 730 VMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKS 909
M SFGC+PD+VTYNTLI GLCR VDR +LL+E+Q E SP+V+T+TSVISGYCK
Sbjct: 238 DMGSFGCYPDIVTYNTLITGLCRTNKVDRGCQLLKEVQSRIELSPDVITFTSVISGYCKL 297
Query: 910 GKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTS 1089
GKME+A+ LFDEMIN G+RP T+N +IDGFGK G + SAL M++KM+ G+ D+ T
Sbjct: 298 GKMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYRSDVFTF 357
Query: 1090 TSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
TSL+D H R G++ +KLW EMN + V
Sbjct: 358 TSLIDGHCRAGQLSQGLKLWQEMNGKNV 385
Score = 84.7 bits (208), Expect = 3e-14
Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 35/299 (11%)
Frame = +1
Query: 331 FDLLLRSLCRMSLHDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKA 510
F++L+R LCR+ D A ++ M + G P+ + LI K ++L
Sbjct: 216 FNILIRGLCRVGEVDKAFELFSDMGSFGCYPDIVTYNTLITGLCRTNKVDRGCQLLKEV- 274
Query: 511 ELCNQRGETFSPSVCN--KFLSLLISRNRVDEAVVLF----------------------- 615
Q SP V +S +++EA VLF
Sbjct: 275 ----QSRIELSPDVITFTSVISGYCKLGKMEEASVLFDEMINAGVRPTSVTFNAMIDGFG 330
Query: 616 -RGHM---------LKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLV 765
G+M + + D +F +++ G C +G++ + +L+ M P
Sbjct: 331 KTGNMGSALAMHQKMLFHGYRSDVFTFTSLIDGHCRAGQLSQGLKLWQEMNGKNVSPSAY 390
Query: 766 TYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDE 945
T++ LIN LC+ + A + LR+++ S P Y VI G+CK+G +++A + E
Sbjct: 391 TFSVLINALCKESRLHEARDFLRQLKW-SNVVPKPFIYNPVIDGFCKAGNVDEANAIVAE 449
Query: 946 MINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLG 1122
M P+ T+ ++I G G ++ A+ ++KM++ G PD +T +L + G
Sbjct: 450 MEEKRCSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVNALTSCLMKAG 508
>ref|XP_008337852.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
[Malus domestica]
Length = 597
Score = 338 bits (867), Expect = e-108
Identities = 185/389 (47%), Positives = 254/389 (65%), Gaps = 5/389 (1%)
Frame = +1
Query: 22 RAQRVSISKILSTALFHGQAR---LESSKASPASTLWFIKVVCTLCIR-HSQSFVVFNSD 189
RA ++++S + A HG AR L + + WF+KVVCTL +R HS V
Sbjct: 65 RASKIAVSHFHNLA--HGGARPRPLHDFEVTSNPEAWFVKVVCTLFLRSHSLDLV----- 117
Query: 190 YFREHLDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSL 369
Y ++L P A+ VI RLNNP L FF +R+SL++ HS ++ LLRSLC+M L
Sbjct: 118 YLSKNLSPSTAFEVIK----RLNNPILGLKFFELSRVSLSVNHSVWTYNFLLRSLCQMGL 173
Query: 370 HDSAKLVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAEL-CNQRGETFSP 546
DSAKLV+ YM +DG P+++ ++ L++S+A GK AE+ L E+ C++ T P
Sbjct: 174 QDSAKLVFDYMRSDGHTPDDSAVELLVSSYAQMGKLDNAEKFL---GEVHCDEIRLT--P 228
Query: 547 SVCNKFLSLLISRNRVDEAVVLFRGHMLKSRSFAPDNCSFNTVMRGLCMSGKVEEAFELF 726
V N ++L+ +N+VDEAV LFR HM PD+ +FN ++RGLC G++ +AFELF
Sbjct: 229 FVYNNLFNVLVKQNKVDEAVCLFRKHM--GSHCCPDSWTFNILIRGLCRVGEIGKAFELF 286
Query: 727 DVMRSFGCHPDLVTYNTLINGLCRVGNVDRAHELLREIQLHSEFSPNVVTYTSVISGYCK 906
M SFGC+PD+VTYNTLI GLCR VDR +LL+E+Q E SP+V+T+TSVISGYCK
Sbjct: 287 SDMGSFGCYPDIVTYNTLITGLCRTNEVDRGCQLLKEVQSRIELSPDVITFTSVISGYCK 346
Query: 907 SGKMEDAANLFDEMINCGIRPNLFTYNVIIDGFGKIGEVASALKMYEKMVSDGFHPDIVT 1086
GKME+A+ LFDEMIN G+RP T+N +IDGFGK G + SAL M++KM+ G+ D+ T
Sbjct: 347 LGKMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFHGYRSDVFT 406
Query: 1087 STSLVDAHSRLGEMDYCVKLWDEMNERKV 1173
TSL+D H R G++ +KLW EMN + V
Sbjct: 407 FTSLIDGHCRAGQLSQGLKLWQEMNGKDV 435
Score = 77.8 bits (190), Expect = 5e-12
Identities = 75/341 (21%), Positives = 141/341 (41%), Gaps = 35/341 (10%)
Frame = +1
Query: 205 LDPFVAYVVINHITHRLNNPNLAFSFFRYTRLSLNLIHSESAFDLLLRSLCRMSLHDSAK 384
L PFV Y + ++ + N + A FR + + F++L+R LCR+ A
Sbjct: 226 LTPFV-YNNLFNVLVKQNKVDEAVCLFR-KHMGSHCCPDSWTFNILIRGLCRVGEIGKAF 283
Query: 385 LVYHYMEADGILPNNALLDFLIASFANAGKFRIAERILIAKAELCNQRGETFSPSVCN-- 558
++ M + G P+ + LI + ++L Q SP V
Sbjct: 284 ELFSDMGSFGCYPDIVTYNTLITGLCRTNEVDRGCQLLKEV-----QSRIELSPDVITFT 338
Query: 559 KFLSLLISRNRVDEAVVLF------------------------RGHM---------LKSR 639
+S +++EA VLF G+M +
Sbjct: 339 SVISGYCKLGKMEEASVLFDEMINAGVRPTSVTFNAMIDGFGKTGNMGSALAMHQKMLFH 398
Query: 640 SFAPDNCSFNTVMRGLCMSGKVEEAFELFDVMRSFGCHPDLVTYNTLINGLCRVGNVDRA 819
+ D +F +++ G C +G++ + +L+ M P T++ LIN LC+ + A
Sbjct: 399 GYRSDVFTFTSLIDGHCRAGQLSQGLKLWQEMNGKDVSPSAYTFSVLINALCKESRLHEA 458
Query: 820 HELLREIQLHSEFSPNVVTYTSVISGYCKSGKMEDAANLFDEMINCGIRPNLFTYNVIID 999
+ LR+++ + + Y VI G+CK+G +++A + EM P+ T+ ++I
Sbjct: 459 RDFLRQLKWSNVVLKPFI-YNPVIDGFCKAGNVDEANAIVAEMEEKRCSPDKVTFTILIL 517
Query: 1000 GFGKIGEVASALKMYEKMVSDGFHPDIVTSTSLVDAHSRLG 1122
G G ++ A+ ++KM++ G PD +T +L + G
Sbjct: 518 GNCMKGRMSEAISNFKKMLAIGCAPDNITVNALTSCLMKAG 558