BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00025955
         (594 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012852549.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-24
ref|XP_011099283.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-21
gb|KVI09036.1| Pentatricopeptide repeat-containing protein [Cyna...    57   4e-06
ref|XP_009594339.1| PREDICTED: pentatricopeptide repeat-containi...    55   9e-06

>ref|XP_012852549.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Erythranthe guttata]
          Length = 576

 Score =  110 bits (274), Expect = 1e-24
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -1

Query: 261 MFSFHVSRQFLKKFKPLSDPVITKAFSSQKIAEQRRPIKHTTRKIRKFPTPKSSIKKQNV 82
           MFS+H   +FLKK KPL   V+TK F+S K  ++ +PI +  +KI K PT KSS KK + 
Sbjct: 1   MFSYHTPHRFLKKIKPLLGQVLTKGFTSLKTTKRTKPINYIRQKINKSPTKKSSTKKNDN 60

Query: 81  EQPKVYSKEKITKIYNILKYSTWDSAQ 1
            +PK+YS+EKITKIYNILKYSTWDSAQ
Sbjct: 61  PEPKIYSREKITKIYNILKYSTWDSAQ 87


>ref|XP_011099283.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390
           [Sesamum indicum]
          Length = 588

 Score =  101 bits (252), Expect = 1e-21
 Identities = 55/89 (61%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = -1

Query: 261 MFSFHVSRQFLKKFK--PLSDPVITKAFSSQKIAEQRRPIKHTTRKIRKFPTPKSSIKKQ 88
           MFS H S QFL KFK  P    ++ K FSSQKI +QR+PIK   +KI K    +S +KK 
Sbjct: 1   MFSSHSSHQFLGKFKLKPFLGLILPKPFSSQKITKQRKPIKQIPQKINKTLARQSLVKKP 60

Query: 87  NVEQPKVYSKEKITKIYNILKYSTWDSAQ 1
           NVE PKVY++E+ITKIYNILKYSTWDSAQ
Sbjct: 61  NVE-PKVYARERITKIYNILKYSTWDSAQ 88


>gb|KVI09036.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 585

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
 Frame = -1

Query: 261 MFSFHVSRQFLKKFKPLSDPVITKAF-------SSQKIAEQRRPIKHTTRKIRKFPTPKS 103
           M + + + +FL+ +KP+    +   F       S      Q +PIK  +RK +K  T KS
Sbjct: 1   MVASYFTFRFLRNYKPILRVCVCSPFCYANTLVSCFHSQTQFKPIKKISRKFKK--TNKS 58

Query: 102 SIKKQNVEQPKVYSKEKITKIYNILKYSTWDSAQ 1
            I+  NV  P+VY K+ I  I NIL+YSTWDSAQ
Sbjct: 59  YIQ-DNVVNPRVYMKDTIRNISNILRYSTWDSAQ 91


>ref|XP_009594339.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like isoform X1 [Nicotiana tomentosiformis]
           gi|697170835|ref|XP_009594340.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g01390-like isoform X1 [Nicotiana tomentosiformis]
           gi|697170837|ref|XP_009594341.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g01390-like isoform X1 [Nicotiana tomentosiformis]
           gi|697170839|ref|XP_009594342.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g01390-like isoform X1 [Nicotiana tomentosiformis]
          Length = 591

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
 Frame = -1

Query: 261 MFSFHVSRQFLKKFKP-LSDPVITKAFSSQKIA---------EQRRPIKHTTRKIRKFPT 112
           MF+   + +F KK +P L   + ++++ S+ I+         +QRR +    R + K   
Sbjct: 1   MFATLAANRFFKKLQPFLCFSISSRSWFSRSISNHVHSFTQSKQRRSVGQGNRPVSK--- 57

Query: 111 PKSSIKKQNVEQPKVYSKEKITKIYNILKYSTWDSAQ 1
              SI+KQ V+ PKV+ ++ IT+I +IL++STWDSAQ
Sbjct: 58  STRSIQKQEVDLPKVFMRDTITRISHILRFSTWDSAQ 94