BLASTX nr result

ID: Rehmannia28_contig00025779 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00025779
         (961 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                55   5e-08

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 55.5 bits (132), Expect(2) = 5e-08
 Identities = 44/207 (21%), Positives = 74/207 (35%)
 Frame = -2

Query: 945 YKTTSSRYKMIFHQKTNVVQVADQSFPRLLFSFKSYPELRNAERFDETTXXXXXXXXXXX 766
           YKT+  +Y + F+ KT V ++ D  FP  +F  +   +L+     +E             
Sbjct: 90  YKTSPHKYMLKFYYKTVVRELKDIVFPSHMFRLQPLSQLKQKIDINE------------- 136

Query: 765 XXXXXYDECRQKNXXXXXXXXXXXXFPKKNSDIIGRIVTMQSVQTKEYGGKMTRFIDITL 586
                                      K+  D+IG +V + + Q K   GK TR ID  L
Sbjct: 137 ---------------------------KELIDLIGMVVEINTPQDKVIAGKATRLIDFLL 169

Query: 585 EDLE*LFSSKSYSTIVYTXXXXXXXXXXXXXXXX*FKKLDYFIIILYRNNRISCTLWEEY 406
           ED E                                              +I CT+W+++
Sbjct: 170 EDTE--------------------------------------------GTQIKCTVWDDH 185

Query: 405 VDAILPYLENHTFDPLVVIIQMCRAKV 325
           V  + P+ ++   DP+++++Q CR KV
Sbjct: 186 VSKLEPFYQSTKQDPVIILLQFCRVKV 212



 Score = 30.4 bits (67), Expect(2) = 5e-08
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 226 EVKVSNTFHVTKLIVNGDIEEIENFRTRFE 137
           ++KV ++F VT++ VN D  E + FR R +
Sbjct: 218 DIKVCSSFDVTQIWVNSDFPEFQEFRDRLK 247


Top