BLASTX nr result

ID: Rehmannia28_contig00024877 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00024877
         (402 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077568.1| PREDICTED: endochitinase A1-like isoform X1 ...    49   1e-09
ref|XP_011077570.1| PREDICTED: endochitinase A1-like isoform X2 ...    49   1e-09
ref|XP_011094995.1| PREDICTED: proteoglycan 4-like [Sesamum indi...    42   3e-06

>ref|XP_011077568.1| PREDICTED: endochitinase A1-like isoform X1 [Sesamum indicum]
           gi|747062149|ref|XP_011077569.1| PREDICTED:
           endochitinase A1-like isoform X1 [Sesamum indicum]
          Length = 472

 Score = 48.9 bits (115), Expect(2) = 1e-09
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 5/42 (11%)
 Frame = +1

Query: 214 IVSKSAPTRSATPTRKPAAPSTTS-----DRSSSGKKNGPRN 324
           I+SKS  +RSATPTRKPA PSTTS     DRSSSG  NG +N
Sbjct: 226 IISKSG-SRSATPTRKPATPSTTSRISAPDRSSSGSSNGLKN 266



 Score = 40.4 bits (93), Expect(2) = 1e-09
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +2

Query: 317 PAILKSSVPYVKSRPSKPSEMLSLSHDA 400
           PA  + + P  KSRPSKPSE+LSLSHDA
Sbjct: 267 PAPSRGTTPTPKSRPSKPSEILSLSHDA 294


>ref|XP_011077570.1| PREDICTED: endochitinase A1-like isoform X2 [Sesamum indicum]
          Length = 465

 Score = 48.9 bits (115), Expect(2) = 1e-09
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 5/42 (11%)
 Frame = +1

Query: 214 IVSKSAPTRSATPTRKPAAPSTTS-----DRSSSGKKNGPRN 324
           I+SKS  +RSATPTRKPA PSTTS     DRSSSG  NG +N
Sbjct: 219 IISKSG-SRSATPTRKPATPSTTSRISAPDRSSSGSSNGLKN 259



 Score = 40.4 bits (93), Expect(2) = 1e-09
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +2

Query: 317 PAILKSSVPYVKSRPSKPSEMLSLSHDA 400
           PA  + + P  KSRPSKPSE+LSLSHDA
Sbjct: 260 PAPSRGTTPTPKSRPSKPSEILSLSHDA 287


>ref|XP_011094995.1| PREDICTED: proteoglycan 4-like [Sesamum indicum]
          Length = 452

 Score = 41.6 bits (96), Expect(2) = 3e-06
 Identities = 23/37 (62%), Positives = 26/37 (70%), Gaps = 6/37 (16%)
 Frame = +2

Query: 308 KTGPAILKSSVP------YVKSRPSKPSEMLSLSHDA 400
           KTG  +LK+  P       VKSRPSKPS+MLSLSHDA
Sbjct: 230 KTGSIMLKTRGPSRGTYQLVKSRPSKPSQMLSLSHDA 266



 Score = 36.2 bits (82), Expect(2) = 3e-06
 Identities = 22/37 (59%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +1

Query: 220 SKSAPTRSATPTRKPAAPSTT-----SDRSSSGKKNG 315
           SK+AP RSATPTR P  PSTT     SD   SG K G
Sbjct: 197 SKTAP-RSATPTRTPLTPSTTSTVSASDHPLSGSKTG 232


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