BLASTX nr result

ID: Rehmannia28_contig00024745 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00024745
         (524 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]    78   5e-14
gb|KRH29116.1| hypothetical protein GLYMA_11G0984003, partial [G...    57   4e-07
emb|CDX84578.1| BnaA03g16520D [Brassica napus]                         55   1e-06
emb|CBI37917.3| unnamed protein product [Vitis vinifera]               55   2e-06
gb|KRH37835.1| hypothetical protein GLYMA_09G093000 [Glycine max]      54   9e-06

>emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]
          Length = 358

 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
 Frame = +3

Query: 252 GWRLINVGRRWW*FIDVSWWWRGWRLVNIRRRRWGFIDVSWRWR----WG*FVNIFWWGF 419
           G  L++  RRWW  + V WWW  WR+V++   RW      W WR    W   +  +WWG 
Sbjct: 185 GLVLVDWRRRWWRLVFVWWWW--WRVVHVWLLRW------WWWRVVHVW--LLGWWWWGL 234

Query: 420 INI--RRWWW*FVHVCWRWWRFVHVCWSRR 503
           + +  RRWWW  V + W WWR + V W RR
Sbjct: 235 VLVDRRRWWWRLVLIWWWWWRLILVNWRRR 264



 Score = 70.1 bits (170), Expect = 4e-11
 Identities = 35/80 (43%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
 Frame = +3

Query: 291 FIDVSWWWRGWRLVNI----RRRRWGFIDVSWRWRWG*FVNIFWWGFINIRRWWW*FVHV 458
           FI   WWW  WR+V +    R R WG + V WR RW   V ++WW        WW  VHV
Sbjct: 162 FISRGWWW--WRVVLVWLLGRWRWWGLVLVDWRRRWWRLVFVWWW--------WWRVVHV 211

Query: 459 C---WRWWRFVHVCWSRRWW 509
               W WWR VHV W   WW
Sbjct: 212 WLLRWWWWRVVHV-WLLGWW 230


>gb|KRH29116.1| hypothetical protein GLYMA_11G0984003, partial [Glycine max]
          Length = 182

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
 Frame = +3

Query: 255 WRLINVGRRW-W*FIDVSWWWRGWRLVNIRRRRWGFIDVSWRWR-WG*FVNIFWWGFINI 428
           W+L    +RW W  +D  W W  W  +   R+RW ++ V W WR W    +  WW +  +
Sbjct: 14  WKLREWRKRWKWLLVD--WNWMKWWQLREWRKRWKWLLVDWNWRKWWQLRD--WWKWF-L 68

Query: 429 RRWWW*FVHVCWR---WWRFVHVCWSRRWW 509
             WW   +  CWR   WW     CW   WW
Sbjct: 69  EDWWTWLLWRCWRRLLWW-----CWWLLWW 93


>emb|CDX84578.1| BnaA03g16520D [Brassica napus]
          Length = 154

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 35/89 (39%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
 Frame = +3

Query: 270 VGRRWW*FIDVSW--WWRGWRLVNIRRRRWGFIDVSWR--WRWG*FVNIFWWGFINIRRW 437
           +G  WW +I   W  WW  WR    RRR W     SWR  WRW     I WW     RRW
Sbjct: 14  IGLGWWSWIR-RWRSWWARWRWRKWRRRWWR----SWRCTWRW-----IRWWR----RRW 59

Query: 438 WW*FV-----HVCWRWWRFVHVCWSRRWW 509
            W  +        WRWWR+    W RR W
Sbjct: 60  CWRRIWRWRGRWTWRWWRW----WKRRRW 84


>emb|CBI37917.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
 Frame = +3

Query: 255 WRLINVGRRW-W*FIDVSWWWRGWRLVNIRRRRWGFIDVSWRWRWG*F-VNIFWW--GFI 422
           W +I+  R W W   + +WWW+  RL+     RW ++ V W WRW    ++ +WW  G +
Sbjct: 61  WFIIHWTRWWEWLLRNWNWWWK--RLLVYGHWRWKWLLVYWHWRWKWLSIHSYWWRKGLM 118

Query: 423 NIRRWWW*FVHVCWRWWRFVHVC-WSRRW 506
               WWW     C        VC WSR W
Sbjct: 119 VYGHWWWMISFWC-------RVCNWSRDW 140


>gb|KRH37835.1| hypothetical protein GLYMA_09G093000 [Glycine max]
          Length = 193

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 35/97 (36%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
 Frame = +3

Query: 255 WRLINVGRRWW*FID---VSWWWRGWRLVNIRRRRWGFIDVSWRWRWG*FVNIFWWGFIN 425
           WRL+N    +W  ++   V+WW   W LVN     WG +   W + WG  VN   WGF N
Sbjct: 52  WRLLNWWLVYWWLLNWGLVNWWLLNWGLVNWGLLNWGLVH-WWFFNWG-LVN---WGFFN 106

Query: 426 --IRRWW---W*FVHVCWRWWRFVHVCWSRRWW*FVH 521
             +  WW   W  VH  +  W  VH  W    W  VH
Sbjct: 107 WGLVHWWFLNWGLVHWWFFNWGLVH--WGFLNWGLVH 141


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