BLASTX nr result
ID: Rehmannia28_contig00024470
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00024470
(309 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099851.1| PREDICTED: pentatricopeptide repeat-containi... 139 5e-37
gb|EYU27007.1| hypothetical protein MIMGU_mgv1a005508mg [Erythra... 112 5e-27
ref|XP_012849792.1| PREDICTED: pentatricopeptide repeat-containi... 112 6e-27
emb|CDP11481.1| unnamed protein product [Coffea canephora] 98 8e-22
ref|XP_008219391.1| PREDICTED: pentatricopeptide repeat-containi... 96 3e-21
ref|XP_015900972.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-20
ref|XP_015900970.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-20
ref|XP_010107704.1| hypothetical protein L484_007723 [Morus nota... 91 3e-19
gb|KOM41794.1| hypothetical protein LR48_Vigan04g199200 [Vigna a... 91 3e-19
ref|XP_014502211.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-19
gb|EEF30142.1| pentatricopeptide repeat-containing protein, puta... 89 8e-19
ref|XP_002532248.2| PREDICTED: pentatricopeptide repeat-containi... 89 9e-19
ref|XP_006338085.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-18
ref|XP_008378558.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-18
ref|XP_004237977.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-18
ref|XP_010266308.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-18
ref|XP_015934861.1| PREDICTED: pentatricopeptide repeat-containi... 89 2e-18
ref|XP_007015425.1| Pentatricopeptide repeat superfamily protein... 88 2e-18
ref|XP_011464642.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 88 3e-18
ref|XP_009795490.1| PREDICTED: pentatricopeptide repeat-containi... 87 4e-18
>ref|XP_011099851.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Sesamum indicum]
Length = 515
Score = 139 bits (350), Expect = 5e-37
Identities = 71/100 (71%), Positives = 81/100 (81%)
Frame = +1
Query: 10 VDIMKGFSRESVHLLPMESLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYI 189
++ MK S +S LL + SLPS++Q ISP+Q LK T AD PTE TATLREFPRKSKYI
Sbjct: 1 MNTMKLASSKSRELLSINSLPSSIQFISPLQHLKATLSGADNPTETTATLREFPRKSKYI 60
Query: 190 SHEAAIDLIRREKNPEHALEIFNKVSIQKGFQHNNSTYAI 309
SHE+AI+L+RREKNPEHALEIF KVS QKGF HNNSTYAI
Sbjct: 61 SHESAINLMRREKNPEHALEIFYKVSNQKGFHHNNSTYAI 100
>gb|EYU27007.1| hypothetical protein MIMGU_mgv1a005508mg [Erythranthe guttata]
Length = 481
Score = 112 bits (279), Expect = 5e-27
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +1
Query: 46 HLLPMESLPSTLQLISPIQQLKVTACRADTPT-ENTATLREFPRKSKYISHEAAIDLIRR 222
HLL ES PS +Q I+P+ T+ RADTP+ E+ T+RE PRK KYI+HE AI+LI+R
Sbjct: 11 HLLSAESAPSLIQFITPL-----TSSRADTPSAESDTTIRESPRKRKYINHETAINLIKR 65
Query: 223 EKNPEHALEIFNKVSIQKGFQHNNSTYAI 309
EKNPE ALEIFNKVS QKGF HNNSTYA+
Sbjct: 66 EKNPEQALEIFNKVSAQKGFCHNNSTYAV 94
>ref|XP_012849792.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Erythranthe guttata]
Length = 507
Score = 112 bits (279), Expect = 6e-27
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +1
Query: 46 HLLPMESLPSTLQLISPIQQLKVTACRADTPT-ENTATLREFPRKSKYISHEAAIDLIRR 222
HLL ES PS +Q I+P+ T+ RADTP+ E+ T+RE PRK KYI+HE AI+LI+R
Sbjct: 11 HLLSAESAPSLIQFITPL-----TSSRADTPSAESDTTIRESPRKRKYINHETAINLIKR 65
Query: 223 EKNPEHALEIFNKVSIQKGFQHNNSTYAI 309
EKNPE ALEIFNKVS QKGF HNNSTYA+
Sbjct: 66 EKNPEQALEIFNKVSAQKGFCHNNSTYAV 94
>emb|CDP11481.1| unnamed protein product [Coffea canephora]
Length = 513
Score = 97.8 bits (242), Expect = 8e-22
Identities = 46/83 (55%), Positives = 63/83 (75%)
Frame = +1
Query: 61 ESLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEH 240
ESL S ++ ISP+Q +K T + D+P E + T+ RKSK+ISH + +DLI+R+K+PEH
Sbjct: 15 ESLSSPIRWISPLQSVKNTTEKLDSPVEASDTVVGVSRKSKFISHASTVDLIKRQKDPEH 74
Query: 241 ALEIFNKVSIQKGFQHNNSTYAI 309
ALEIFN+ + QKGF HNNSTYA+
Sbjct: 75 ALEIFNRAAEQKGFSHNNSTYAV 97
>ref|XP_008219391.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Prunus mume]
Length = 517
Score = 96.3 bits (238), Expect = 3e-21
Identities = 47/81 (58%), Positives = 60/81 (74%)
Frame = +1
Query: 64 SLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHA 243
+L ++L ISP+Q KV + D P E T T E RK+KYISHE+ I+LI+RE++P+HA
Sbjct: 20 TLSASLPWISPLQFTKVNTHKPDPPPETTTTQTETRRKTKYISHESTINLIKRERDPQHA 79
Query: 244 LEIFNKVSIQKGFQHNNSTYA 306
LEIFN VS QKGF HNN+TYA
Sbjct: 80 LEIFNMVSEQKGFNHNNATYA 100
>ref|XP_015900972.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
isoform X2 [Ziziphus jujuba]
gi|1009165326|ref|XP_015900973.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
isoform X2 [Ziziphus jujuba]
gi|1009165328|ref|XP_015900974.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
isoform X2 [Ziziphus jujuba]
Length = 520
Score = 94.0 bits (232), Expect = 2e-20
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +1
Query: 67 LPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHAL 246
L S++ ISP+Q +VT+ + D PT+ T + E R++KYISHE AI+LI+REK+P+HAL
Sbjct: 21 LSSSVPWISPLQFSEVTSHKPDPPTKTTNIVVEPQRRAKYISHETAINLIKREKDPQHAL 80
Query: 247 EIFNKVSIQKGFQHNNSTYA 306
EIFN VS Q+GF HNN+TYA
Sbjct: 81 EIFNMVSEQRGFSHNNATYA 100
>ref|XP_015900970.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
isoform X1 [Ziziphus jujuba]
Length = 545
Score = 94.0 bits (232), Expect = 2e-20
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +1
Query: 67 LPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHAL 246
L S++ ISP+Q +VT+ + D PT+ T + E R++KYISHE AI+LI+REK+P+HAL
Sbjct: 46 LSSSVPWISPLQFSEVTSHKPDPPTKTTNIVVEPQRRAKYISHETAINLIKREKDPQHAL 105
Query: 247 EIFNKVSIQKGFQHNNSTYA 306
EIFN VS Q+GF HNN+TYA
Sbjct: 106 EIFNMVSEQRGFSHNNATYA 125
>ref|XP_010107704.1| hypothetical protein L484_007723 [Morus notabilis]
gi|587929521|gb|EXC16677.1| hypothetical protein
L484_007723 [Morus notabilis]
Length = 513
Score = 90.5 bits (223), Expect = 3e-19
Identities = 45/84 (53%), Positives = 63/84 (75%)
Frame = +1
Query: 55 PMESLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNP 234
P+ES S+++ ISP+Q K ++ + D PTE+ A+ E RK+KYISH+ AI+LI+RE++P
Sbjct: 18 PLES-SSSIRWISPVQLSKASSKKPDPPTESIASSLEGRRKAKYISHDTAINLIKRERDP 76
Query: 235 EHALEIFNKVSIQKGFQHNNSTYA 306
+ ALEIFN VS QKGF HN TY+
Sbjct: 77 QRALEIFNSVSEQKGFNHNGDTYS 100
>gb|KOM41794.1| hypothetical protein LR48_Vigan04g199200 [Vigna angularis]
gi|965662728|dbj|BAT78437.1| hypothetical protein
VIGAN_02111300 [Vigna angularis var. angularis]
Length = 519
Score = 90.5 bits (223), Expect = 3e-19
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +1
Query: 58 MESLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPE 237
+ S S+L ISP++ K + D P E A E PRK K+ISH+ AIDLIRREK+P+
Sbjct: 24 ISSESSSLPWISPLKFTKPAKPKPDPPPETAA---EPPRKRKFISHDGAIDLIRREKDPQ 80
Query: 238 HALEIFNKVSIQKGFQHNNSTYA 306
HAL+IFN VS QKGFQHNN+TYA
Sbjct: 81 HALKIFNMVSQQKGFQHNNATYA 103
>ref|XP_014502211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Vigna radiata var. radiata]
gi|950981089|ref|XP_014502213.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Vigna radiata var. radiata]
gi|950981094|ref|XP_014502214.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Vigna radiata var. radiata]
Length = 519
Score = 90.1 bits (222), Expect = 4e-19
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = +1
Query: 58 MESLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPE 237
+ S S+L ISP++ K + D P E A E PRK K+ISH+ AIDLIRREK+P+
Sbjct: 24 ISSESSSLPWISPLKFTKPAKPKPDPPPETAA---EPPRKRKFISHDGAIDLIRREKDPQ 80
Query: 238 HALEIFNKVSIQKGFQHNNSTYAI 309
HAL+IFN VS QKGF HNN+TYAI
Sbjct: 81 HALKIFNMVSQQKGFHHNNATYAI 104
>gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 89.4 bits (220), Expect = 8e-19
Identities = 43/73 (58%), Positives = 56/73 (76%)
Frame = +1
Query: 88 ISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHALEIFNKVS 267
ISP+Q K D+PTE ++TL E RK K+ISHE+AI+LI+REK+P+HALEIFN V
Sbjct: 24 ISPLQFSKAAPLVPDSPTETSSTLVETGRKCKFISHESAINLIKREKDPQHALEIFNMVG 83
Query: 268 IQKGFQHNNSTYA 306
QKGF HN++TY+
Sbjct: 84 EQKGFNHNHATYS 96
>ref|XP_002532248.2| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Ricinus communis]
Length = 1155
Score = 89.4 bits (220), Expect = 9e-19
Identities = 43/73 (58%), Positives = 56/73 (76%)
Frame = +1
Query: 88 ISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHALEIFNKVS 267
ISP+Q K D+PTE ++TL E RK K+ISHE+AI+LI+REK+P+HALEIFN V
Sbjct: 658 ISPLQFSKAAPLVPDSPTETSSTLVETGRKCKFISHESAINLIKREKDPQHALEIFNMVG 717
Query: 268 IQKGFQHNNSTYA 306
QKGF HN++TY+
Sbjct: 718 EQKGFNHNHATYS 730
>ref|XP_006338085.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Solanum tuberosum] gi|971534270|ref|XP_015167983.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g18475 [Solanum tuberosum]
Length = 511
Score = 89.0 bits (219), Expect = 1e-18
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +1
Query: 73 STLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHALEI 252
S++Q ISP+ + R D P + T + PRK KYISHE+A++LI++E++ ALEI
Sbjct: 20 SSVQWISPLHYQGRNSLRPDAPIKRDGTSEQLPRKRKYISHESAVNLIKQERDARRALEI 79
Query: 253 FNKVSIQKGFQHNNSTYAI 309
FNKVS QKGF HNNSTYA+
Sbjct: 80 FNKVSDQKGFNHNNSTYAV 98
>ref|XP_008378558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Malus domestica] gi|657973513|ref|XP_008378559.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g18475 [Malus domestica]
Length = 517
Score = 89.0 bits (219), Expect = 1e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +1
Query: 64 SLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHA 243
+L S+L ISP+ +V + D P E T T + RK KYISHE+AI+LI+R ++P+HA
Sbjct: 20 TLSSSLPWISPLHFSRVKLHKPDPPPETTGTQTQTRRKGKYISHESAINLIKRGRDPQHA 79
Query: 244 LEIFNKVSIQKGFQHNNSTY 303
LEIFN VS QKGF HNN+TY
Sbjct: 80 LEIFNMVSEQKGFNHNNATY 99
>ref|XP_004237977.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Solanum lycopersicum]
Length = 511
Score = 88.6 bits (218), Expect = 2e-18
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = +1
Query: 73 STLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHALEI 252
S++Q ISP+ + R P E T + PRK KYISHE+A++LI++EK+ ALEI
Sbjct: 20 SSVQWISPLDYQGRNSLRPGAPIERDGTSEQVPRKRKYISHESAVNLIKQEKDARRALEI 79
Query: 253 FNKVSIQKGFQHNNSTYAI 309
FNKVS QKGF HNNSTYA+
Sbjct: 80 FNKVSDQKGFNHNNSTYAV 98
>ref|XP_010266308.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Nelumbo nucifera] gi|719968733|ref|XP_010266317.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g18475 [Nelumbo nucifera]
Length = 515
Score = 88.6 bits (218), Expect = 2e-18
Identities = 41/78 (52%), Positives = 59/78 (75%)
Frame = +1
Query: 76 TLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHALEIF 255
+L ISP+Q LK T + D P + + L+E RK K+ISHE+A ++I+REK+P+ ALEIF
Sbjct: 23 SLPWISPLQYLKPTRPKPDPPPQTSTLLQEPQRKPKFISHESATNMIKREKDPQRALEIF 82
Query: 256 NKVSIQKGFQHNNSTYAI 309
N VS+Q+GF HN+STY++
Sbjct: 83 NMVSLQRGFNHNHSTYSV 100
>ref|XP_015934861.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Arachis duranensis]
Length = 517
Score = 88.6 bits (218), Expect = 2e-18
Identities = 46/95 (48%), Positives = 62/95 (65%)
Frame = +1
Query: 25 GFSRESVHLLPMESLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAA 204
G V + S+ S+L ISP++ K + D P E + T E +K KYISHE+A
Sbjct: 8 GSRHSRVPSVSSSSVSSSLPWISPLKLAKPLEPKLDPPPETSGTPPESRKKHKYISHESA 67
Query: 205 IDLIRREKNPEHALEIFNKVSIQKGFQHNNSTYAI 309
I+LI+REK+P+HAL+IFN VS QKGF HN++TY I
Sbjct: 68 INLIKREKDPQHALKIFNMVSEQKGFNHNSATYGI 102
>ref|XP_007015425.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|590585358|ref|XP_007015426.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508785788|gb|EOY33044.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508785789|gb|EOY33045.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao]
Length = 530
Score = 88.2 bits (217), Expect = 2e-18
Identities = 43/77 (55%), Positives = 56/77 (72%)
Frame = +1
Query: 73 STLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHALEI 252
S L ISP+Q LK + + D P E TL E RK +++SHE AI+LI+RE++P+ ALEI
Sbjct: 22 SLLPWISPLQFLKANSQKRDPPPEIPYTLTESQRKPRFVSHETAINLIKRERDPQRALEI 81
Query: 253 FNKVSIQKGFQHNNSTY 303
FN+VS QKGF HNN+TY
Sbjct: 82 FNRVSEQKGFSHNNATY 98
>ref|XP_011464642.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18475-like [Fragaria vesca subsp. vesca]
Length = 560
Score = 87.8 bits (216), Expect = 3e-18
Identities = 45/81 (55%), Positives = 60/81 (74%)
Frame = +1
Query: 64 SLPSTLQLISPIQQLKVTACRADTPTENTATLREFPRKSKYISHEAAIDLIRREKNPEHA 243
++ S++ ISP++ K+ A + D P + T E RKSKYISH AAI+LI+RE++P+HA
Sbjct: 66 TISSSVSWISPLKLSKLNAHQPDPPPD---TRTEARRKSKYISHNAAINLIKRERDPQHA 122
Query: 244 LEIFNKVSIQKGFQHNNSTYA 306
LEIFN VS QKGF HNN+TYA
Sbjct: 123 LEIFNMVSEQKGFNHNNATYA 143
>ref|XP_009795490.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Nicotiana sylvestris] gi|698499316|ref|XP_009795491.1|
PREDICTED: pentatricopeptide repeat-containing protein
At5g18475 [Nicotiana sylvestris]
Length = 512
Score = 87.4 bits (215), Expect = 4e-18
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +1
Query: 73 STLQLISPIQQLKVTACRADTPTE-NTATLREFPRKSKYISHEAAIDLIRREKNPEHALE 249
S++Q ISP+ ++ R D E + T+ E PRK KYISHEAA+ LI++EK+ + ALE
Sbjct: 20 SSVQWISPLHYQSRSSPRQDAAIEIDGTTVEEVPRKRKYISHEAAVSLIKQEKDAKRALE 79
Query: 250 IFNKVSIQKGFQHNNSTYAI 309
IFNKVS QKGF HNNSTYA+
Sbjct: 80 IFNKVSDQKGFNHNNSTYAV 99