BLASTX nr result

ID: Rehmannia28_contig00024272 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00024272
         (516 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011083507.1| PREDICTED: auxin response factor 5 [Sesamum ...   184   4e-51
ref|XP_011074654.1| PREDICTED: auxin response factor 5-like [Ses...    85   3e-16
ref|XP_012835742.1| PREDICTED: auxin response factor 5 [Erythran...    61   8e-08
emb|CDP07420.1| unnamed protein product [Coffea canephora]             60   2e-07

>ref|XP_011083507.1| PREDICTED: auxin response factor 5 [Sesamum indicum]
          Length = 937

 Score =  184 bits (468), Expect = 4e-51
 Identities = 121/231 (52%), Positives = 143/231 (61%), Gaps = 59/231 (25%)
 Frame = -1

Query: 516  DQLMKMLIKPHNRVLSPANISPSLQEAK--------SVMQSAVKQKPDVVTPDVFPQGEN 361
            DQLMKML+KP  RV+SP NI+P +QEAK        S+MQSAVKQKP+++TPD FPQGE 
Sbjct: 437  DQLMKMLVKPQ-RVISPGNIAPPMQEAKDAARQEATSLMQSAVKQKPELITPDGFPQGEI 495

Query: 360  RHFTNSSVLLQPGKPAN----------------------LTTDQLSQFQSQGQCIEEKNP 247
             H TNS +LL PGKPA                       L +DQLS FQ+QGQC EEK P
Sbjct: 496  HHITNSGILL-PGKPAQTDKLENQTSSGTSSELTKVEPVLASDQLSHFQTQGQCNEEKLP 554

Query: 246  V---------NDFSVMEQNN------NGAWNSQSRLDSHVIQTQQIDPSQAVGSANANAL 112
            V         NDF+ M+QNN         W SQSRLDSH IQTQQIDPSQ V +A+ANAL
Sbjct: 555  VKPTNPHNLINDFAGMDQNNGPLPLQTSGWISQSRLDSHSIQTQQIDPSQ-VETASANAL 613

Query: 111  LQCSAGQVDFNSYT-------------GSLSVIKKSDQPS-DAAAAFPVLP 1
            LQC  GQV+F+SY+             GSL++IKKSDQPS  +  A+ VLP
Sbjct: 614  LQC-PGQVEFSSYSPMYSSPSGSFRNPGSLTMIKKSDQPSTTSCTAYTVLP 663


>ref|XP_011074654.1| PREDICTED: auxin response factor 5-like [Sesamum indicum]
           gi|747056764|ref|XP_011074655.1| PREDICTED: auxin
           response factor 5-like [Sesamum indicum]
           gi|747056766|ref|XP_011074656.1| PREDICTED: auxin
           response factor 5-like [Sesamum indicum]
           gi|747056768|ref|XP_011074657.1| PREDICTED: auxin
           response factor 5-like [Sesamum indicum]
          Length = 1012

 Score = 85.1 bits (209), Expect = 3e-16
 Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 35/161 (21%)
 Frame = -1

Query: 516 DQLMKMLIKPHNRVLSPANISPSLQEAK--------SVMQSAVKQKPDVVTPDVFPQGEN 361
           +QLMKML KP   +++P +I+ S+QE K        SVMQ A+KQ+P+++  DV+PQGE+
Sbjct: 436 EQLMKMLTKPPG-LIAPGSIAYSMQEVKDVVPREATSVMQPAMKQRPELILQDVYPQGES 494

Query: 360 R--------HFTNSSVL----LQPGKPANLTTDQLSQFQSQGQCIEEKNPV--------- 244
                      TN  +L    L   +P  LTTDQL QFQS+ Q  EE+ PV         
Sbjct: 495 NLQSVAGQPIITNPHILAGSDLSKQEPV-LTTDQLIQFQSESQLNEERMPVKPLNPHNLI 553

Query: 243 NDFSVMEQNN------NGAWNSQSRLDSHVIQTQQIDPSQA 139
           NDF+V  Q+N        +  +QSRLDSH +   ++  ++A
Sbjct: 554 NDFAVTNQHNGTVSLQTSSCITQSRLDSHALPAGKLTSAEA 594



 Score = 81.6 bits (200), Expect = 5e-15
 Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 34/199 (17%)
 Frame = -1

Query: 495  IKPHN-----RVLSPANISPSLQEAKSVMQSAVKQKPDVVTPDVFPQGENRHFTNSSVLL 331
            + PHN      V +  N + SLQ +  + QS +            P G+       S L 
Sbjct: 547  LNPHNLINDFAVTNQHNGTVSLQTSSCITQSRLDSH-------ALPAGKLTSAEAGSELS 599

Query: 330  QPGKPANLTTDQLSQFQSQGQCIEEKNPV---------NDFSVMEQNNN------GAWNS 196
            +  +P  L TDQLSQF+S+ Q  E+  PV         NDF+V  QNN         + S
Sbjct: 600  KQ-EPV-LATDQLSQFESEMQLNEKSMPVRPVNPQNVINDFAVTNQNNGMPALHTSPYIS 657

Query: 195  QSRLDSHVIQTQQIDPSQAVGSANANALLQCSAGQVDFNSY-------TGSL------SV 55
             SRLD H++QTQQIDPSQ V SA+AN L Q S+ QV+FNSY       +GSL      S+
Sbjct: 658  HSRLDPHILQTQQIDPSQ-VTSASANDLPQYSS-QVEFNSYSSIYPPPSGSLRNPRPPSM 715

Query: 54   IKKSDQPSDAA-AAFPVLP 1
            ++KSDQ S ++   +P+LP
Sbjct: 716  LQKSDQLSTSSDIVYPMLP 734


>ref|XP_012835742.1| PREDICTED: auxin response factor 5 [Erythranthe guttata]
          Length = 825

 Score = 60.8 bits (146), Expect = 8e-08
 Identities = 65/177 (36%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
 Frame = -1

Query: 516 DQLMKMLIKPHNR--VLSPANIS--PSLQEAKSVMQSAVKQKPDVVTPDVFPQGENRHFT 349
           DQLMKML    N+  ++  AN +  P  QE+KSV          V +PDVF QG+NR+F 
Sbjct: 443 DQLMKMLTSKPNKLPIMQDANDTAPPPPQESKSVT---------VQSPDVFQQGQNRNFA 493

Query: 348 NSSVLLQPG-KPANLTTDQLSQFQSQGQCIEEKNPVNDFSVMEQNNNGAWNSQSRLDSHV 172
           N+S  + P  KPA  T++++    S     E  +P N+       ++G     +R D  V
Sbjct: 494 NTSNNIPPPVKPA--TSNKIGSQISSETSSELIHPTNN----GLQSSGWVPQPTRFDPPV 547

Query: 171 I-QTQQIDPSQAVGSANANALLQCSAGQVDFNSY------------TGSLSVIKKSD 40
           I QTQQIDP Q          LQ S G +DF SY             G+ S+IKKSD
Sbjct: 548 INQTQQIDPFQVDPQP-----LQYS-GLIDFASYPPMSSPSGTFQNPGTFSMIKKSD 598


>emb|CDP07420.1| unnamed protein product [Coffea canephora]
          Length = 949

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 58/187 (31%)
 Frame = -1

Query: 516 DQLMKMLIKPH----------NRVLSPANISPSLQEAKSVMQSAVKQKPDVVTPDV---- 379
           +QLMKMLI+P+          + + + A +SP L EA+ + Q+ +KQK +++  +     
Sbjct: 437 EQLMKMLIRPNCVDNLPSTASSILEANAKVSPVL-EAEKITQAVIKQKAEIIPQEHVSSQ 495

Query: 378 --------FPQGENRHFTNSSVLLQPGKPANLT---------------------TDQLSQ 286
                     Q  N     SS  + PGKP +L                      +DQLSQ
Sbjct: 496 SESIQQSHLDQANNSKLNFSSQSVLPGKPQHLDKLGNQTPVIHTEATKLEPELQSDQLSQ 555

Query: 285 FQSQGQCIEEK---------NPVNDFSVMEQNNN------GAWNSQSRLDSHVIQTQQID 151
           + S G C +++         N VND  ++ QNNN           Q++LDSH++Q+   D
Sbjct: 556 YSSLGHCNDDRLVVKPANSHNLVNDIVLLNQNNNMLAVQASPKMMQAQLDSHLLQSLPSD 615

Query: 150 PSQAVGS 130
            SQ   S
Sbjct: 616 ASQVENS 622


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