BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00024270
         (1947 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposo...   417   0.0  
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]   320   0.0  
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]   324   e-166
emb|CBI37296.3| unnamed protein product [Vitis vinifera]              363   e-164
gb|KYP42102.1| Retrovirus-related Pol polyprotein from transposo...   330   e-158
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   337   e-158
gb|KYP63625.1| Retrovirus-related Pol polyprotein from transposo...   336   e-157
gb|KYP57183.1| Retrovirus-related Pol polyprotein from transposo...   325   e-149
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   212   e-146
emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]   332   e-145
gb|KYP50277.1| Retrovirus-related Pol polyprotein from transposo...   246   e-144
gb|KYP60819.1| Retrovirus-related Pol polyprotein from transposo...   308   e-142
gb|KYP60712.1| Retrovirus-related Pol polyprotein from transposo...   308   e-135
emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]   352   e-134
gb|KYP37051.1| Retrovirus-related Pol polyprotein from transposo...   304   e-130
gb|KYP36250.1| Retrovirus-related Pol polyprotein from transposo...   303   e-121
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   397   e-118
emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]   169   e-117
emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]   373   e-115
gb|KYP33374.1| Retrovirus-related Pol polyprotein from transposo...   345   e-115

>gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 560

 Score =  417 bits (1073), Expect(3) = 0.0
 Identities = 194/267 (72%), Positives = 225/267 (84%)
 Frame = +1

Query: 838  KAVVECYKYHKLGHFQYECPSLEKEANYAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGC 1017
            +A VECYK H+LGHFQ ECP+  KEANYAEH  EE+MLLMSY++++E +  D WFLDSGC
Sbjct: 215  RATVECYKCHQLGHFQNECPTWNKEANYAEHEEEEEMLLMSYMDVNETQREDAWFLDSGC 274

Query: 1018 SNHMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKN 1197
            SNHMCG+KALF NL+E FRQ VKLGNNSKM+V+GKGN+RLKV+ F HVVTEVF+VPELKN
Sbjct: 275  SNHMCGDKALFYNLNEDFRQIVKLGNNSKMSVLGKGNVRLKVNGFTHVVTEVFYVPELKN 334

Query: 1198 NLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGATKLKKPECFYTT 1377
            NLLSIGQLQEKGL+ILIQ   CKIYHPEKGL+IQ EMT+N MF LT     +KP C +TT
Sbjct: 335  NLLSIGQLQEKGLSILIQNGSCKIYHPEKGLVIQTEMTTNRMFVLTAVPMPQKPTCLHTT 394

Query: 1378 TQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDAFPKKST 1557
             Q+++HLWH RYG+LS+KGLRTLQ KKMVHGLP  ++ T VCT CMIGKQHRD  PKK+ 
Sbjct: 395  VQEIAHLWHCRYGHLSHKGLRTLQYKKMVHGLPPLKSPTDVCTVCMIGKQHRDPIPKKAN 454

Query: 1558 WRASQKLQLIHADICGPITPISNSKMR 1638
            WRA+QKLQLIHADICGPI+P SNSK R
Sbjct: 455  WRATQKLQLIHADICGPISPTSNSKKR 481



 Score =  172 bits (436), Expect(3) = 0.0
 Identities = 83/107 (77%), Positives = 99/107 (92%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           ++IW+SMK+K+EGN RVKRS LQALRKEFETL+MK+GE +++YFSRV+ VANKMR YGEQ
Sbjct: 88  KQIWESMKRKFEGNARVKRSHLQALRKEFETLEMKAGEGVTEYFSRVLIVANKMRTYGEQ 147

Query: 599 MKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           M+D T++EKILRSL EKFNY+VCSIEESKDID LSIDELQSSL+VHE
Sbjct: 148 MQDVTVVEKILRSLSEKFNYVVCSIEESKDIDQLSIDELQSSLMVHE 194



 Score =  146 bits (368), Expect(3) = 0.0
 Identities = 68/89 (76%), Positives = 80/89 (89%)
 Frame = +3

Query: 159 NFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLEELKL 338
           +FVQP+I RFDGHYDHW+MLMENF RSKEYWS++ETGYVE E G   +EAQ+K+LEELKL
Sbjct: 1   SFVQPSIPRFDGHYDHWAMLMENFLRSKEYWSLIETGYVEPEKGVEQSEAQRKRLEELKL 60

Query: 339 RDMKVKNYLFQAIDRTILETILEKNTSKR 425
           +D+KVKNYLFQAI+R ILETIL KNTSK+
Sbjct: 61  KDLKVKNYLFQAIERKILETILVKNTSKQ 89


>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score =  320 bits (820), Expect(4) = 0.0
 Identities = 169/343 (49%), Positives = 214/343 (62%), Gaps = 2/343 (0%)
 Frame = +1

Query: 739  ALKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKE-- 912
            ALKV+ ED++  R                Q F+K+ +ECY  HKLGHFQYECP+ E E  
Sbjct: 274  ALKVTYEDQSRGRGRGRGGFRGGRRGGSRQSFDKSTIECYNCHKLGHFQYECPNKETETK 333

Query: 913  ANYAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLG 1092
            A YAE   E  +LLM++ +  EA   ++WFLDSGC NHMCG+K LF  LDESF   VKLG
Sbjct: 334  AQYAEASGE--ILLMAHADGKEASKEELWFLDSGCXNHMCGKKELFSRLDESFSTFVKLG 391

Query: 1093 NNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIY 1272
            +NS M                             NNLLS+GQLQEKG AILIQ+ KCKIY
Sbjct: 392  DNSSMA----------------------------NNLLSVGQLQEKGXAILIQHGKCKIY 423

Query: 1273 HPEKGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSHLWHYRYGYLSYKGLRTLQE 1452
            HP++GLI+++ M+SN MF L     LK+  C  + T+D + LWH RYG+LS+  L+TLQ+
Sbjct: 424  HPDRGLIMEIAMSSNRMFILPAQKLLKEEICLSSFTEDQARLWHLRYGHLSFNXLKTLQQ 483

Query: 1453 KKMVHGLPQFEASTKVCTDCMIGKQHRDAFPKKSTWRASQKLQLIHADICGPITPISNSK 1632
            K++V+GLPQF+A  KVC DC++GKQ R+ FPK+STWRASQ LQL+HADICGPI P SNSK
Sbjct: 484  KRLVNGLPQFQAPLKVCEDCLVGKQRRNPFPKESTWRASQILQLVHADICGPINPTSNSK 543

Query: 1633 MRKWNQEAVDSSLHSATKWSGREEEPDYHEYALKYAFREKDSK 1761
                                 RE+EP+Y+EY  K+AFR+K  K
Sbjct: 544  K--------------------REKEPNYYEYGAKHAFRKKIPK 566



 Score =  144 bits (364), Expect(4) = 0.0
 Identities = 66/105 (62%), Positives = 90/105 (85%)
 Frame = +2

Query: 425 IWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQMK 604
           IWDS+K+KY+G  RV+R+  QALRKEFE L+MK GE++++YF+R +++ANKMR++G++M+
Sbjct: 158 IWDSLKQKYQGTARVQRAQRQALRKEFEMLNMKVGESVNEYFARTLTIANKMRVHGQKME 217

Query: 605 DATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           D  +IEKILRS+  KFN +VCSIEES D+D LSID LQSSL+VHE
Sbjct: 218 DVVVIEKILRSMTPKFNCVVCSIEESNDLDTLSIDVLQSSLLVHE 262



 Score =  138 bits (347), Expect(4) = 0.0
 Identities = 68/109 (62%), Positives = 81/109 (74%)
 Frame = +3

Query: 96  LEKQSSSLCVFAAANKMTTEGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYV 275
           LEKQ SS  V   A +M TE NFVQPAI + D HYDHW MLMENF RSKEYW+++E G  
Sbjct: 51  LEKQQSSKSV---AVRMATESNFVQPAIPKLDAHYDHWCMLMENFLRSKEYWNLIEQGIX 107

Query: 276 ELEHGTVLAEAQQKKLEELKLRDMKVKNYLFQAIDRTILETILEKNTSK 422
             E G  L E Q+K +E  KL+D+KVKNYLFQAIDR++LETIL K+T+K
Sbjct: 108 TAEAGVELTEGQKKVIENAKLKDLKVKNYLFQAIDRSVLETILNKDTAK 156



 Score =  123 bits (309), Expect(4) = 0.0
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = +2

Query: 1748 KKIPKTFWPEAVNWTVHVLNRSPTLVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDV 1927
            KKIPKTFWPEAVNWTV+VLNRSPTLVVK+MTPEEAWSG KPSV++FRV G ISHVHIPD 
Sbjct: 562  KKIPKTFWPEAVNWTVYVLNRSPTLVVKDMTPEEAWSGSKPSVDHFRVFGCISHVHIPDS 621

Query: 1928 KRTKLE 1945
            KRTKL+
Sbjct: 622  KRTKLD 627


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score =  324 bits (831), Expect(3) = e-166
 Identities = 167/300 (55%), Positives = 198/300 (66%)
 Frame = +1

Query: 739  ALKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKEAN 918
            ALKV+ ++R     +              Q FN+A VECY+ H+LGHFQY CP+  KEAN
Sbjct: 213  ALKVTTDERIGAGGHGRNGYRGRGRGRGRQAFNRATVECYRCHQLGHFQYNCPTWNKEAN 272

Query: 919  YAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLGNN 1098
            YAE    E +LLM+YVE  EA  NDVWFLD GCSNHMCG+  +F  LDESFRQ VKLGNN
Sbjct: 273  YAELEEHEDVLLMAYVEEHEAMRNDVWFLDFGCSNHMCGDARMFSELDESFRQQVKLGNN 332

Query: 1099 SKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHP 1278
            SK+TV G+GN+RL+++ FN+V+T VF+VPELKNNLLSIGQLQEKGLAI+I    CKIYHP
Sbjct: 333  SKITVKGRGNVRLQLNGFNYVLTVVFYVPELKNNLLSIGQLQEKGLAIMIHDGLCKIYHP 392

Query: 1279 EKGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKK 1458
             KGLIIQ  M++N MF L  A K +K E                                
Sbjct: 393  NKGLIIQTAMSTNRMFTLL-ANKQEKNE-------------------------------N 420

Query: 1459 MVHGLPQFEASTKVCTDCMIGKQHRDAFPKKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            MVHGLP    +T VCTDC+ GKQHRD  PKKS WRA++KLQLIHA+ICGP+TP SN K R
Sbjct: 421  MVHGLPHLLPTTLVCTDCLNGKQHRDPIPKKSAWRATKKLQLIHANICGPVTPTSNGKKR 480



 Score =  166 bits (420), Expect(3) = e-166
 Identities = 81/107 (75%), Positives = 96/107 (89%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           ++IWDSMKKKYE N RVKRSILQ LR++FETL+MKSGE I+DYFSRVMSV+NKMR +GEQ
Sbjct: 95  KQIWDSMKKKYEENARVKRSILQTLRRDFETLEMKSGECITDYFSRVMSVSNKMRFHGEQ 154

Query: 599 MKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           +++ TI+EKILRSL + FNYIVCSIEESKD D L+I+ELQ SLIVHE
Sbjct: 155 IREVTIVEKILRSLTDNFNYIVCSIEESKDTDTLTINELQISLIVHE 201



 Score =  146 bits (369), Expect(3) = e-166
 Identities = 67/93 (72%), Positives = 81/93 (87%)
 Frame = +3

Query: 147 TTEGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLE 326
           T+EG F QPAI  F+GHYDHWSMLMENF RSKEYWS+VETGY E +    + +AQQK+L+
Sbjct: 4   TSEGQFAQPAIPCFNGHYDHWSMLMENFLRSKEYWSLVETGYDEPQANAAMTKAQQKRLD 63

Query: 327 ELKLRDMKVKNYLFQAIDRTILETILEKNTSKR 425
           E+KL+D+KVKNY+FQAIDRTILETIL+KNTSK+
Sbjct: 64  EMKLKDLKVKNYMFQAIDRTILETILQKNTSKQ 96



 Score =  117 bits (294), Expect = 9e-24
 Identities = 51/67 (76%), Positives = 61/67 (91%)
 Frame = +2

Query: 1745 EKKIPKTFWPEAVNWTVHVLNRSPTLVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPD 1924
            EKKIPKTFWPEAVNWT++VLNRSP + VKN+TPEEAWSGVKP+VE+FRV   ++HVH+PD
Sbjct: 532  EKKIPKTFWPEAVNWTMYVLNRSPIVAVKNVTPEEAWSGVKPTVEHFRVFECVAHVHVPD 591

Query: 1925 VKRTKLE 1945
             KRTKL+
Sbjct: 592  AKRTKLD 598


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score =  363 bits (932), Expect(3) = e-164
 Identities = 168/300 (56%), Positives = 222/300 (74%)
 Frame = +1

Query: 739  ALKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKEAN 918
            ALKV+  D +  R                +FF+KA +ECY  HKLGHF +ECP  E  A 
Sbjct: 236  ALKVTHGDHSGSRGRGHGNYRGRGRGRNRRFFDKATMECYNCHKLGHFAWECPHRETGAY 295

Query: 919  YAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLGNN 1098
            YA  +N+E+MLLM+YV++++    D WFLDSGCSNHMCG+K  F + D +FR +VKLGNN
Sbjct: 296  YA--KNQEEMLLMAYVDLNKTSREDTWFLDSGCSNHMCGKKDYFSDFDGTFRDSVKLGNN 353

Query: 1099 SKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHP 1278
            + M+V+GKGN+RLKV++   ++T VF+VPELKNNLLSIGQLQEKGL IL Q+ KCK++H 
Sbjct: 354  TSMSVLGKGNVRLKVNEMTQIITGVFYVPELKNNLLSIGQLQEKGLTILFQHGKCKVFHS 413

Query: 1279 EKGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKK 1458
            +KGLI+  +M+SN MF L   ++     CF T T+D+  LWH RYG+LS++GL+TLQ++K
Sbjct: 414  QKGLIMDTKMSSNRMFMLYALSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRK 473

Query: 1459 MVHGLPQFEASTKVCTDCMIGKQHRDAFPKKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            MV+GLPQF+  +K+C DC++GKQHR + PKKS WRA++ LQL+HADICGPI PISNSK R
Sbjct: 474  MVNGLPQFQPPSKLCKDCLVGKQHRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKR 533



 Score =  148 bits (373), Expect(3) = e-164
 Identities = 68/105 (64%), Positives = 89/105 (84%)
 Frame = +2

Query: 425 IWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQMK 604
           IWDSMK+K++G  RVKR  LQALRKEF+ L MKSGET+++YFSR +++ANKM++ GE   
Sbjct: 119 IWDSMKQKFQGTTRVKRGNLQALRKEFKILHMKSGETVNEYFSRTLAIANKMKVNGEDKG 178

Query: 605 DATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           +  ++EKILRS+  KF+Y+VCSIEESKD+D L+IDELQSSL+VHE
Sbjct: 179 NTAVVEKILRSMTSKFDYVVCSIEESKDLDTLTIDELQSSLLVHE 223



 Score =  120 bits (302), Expect(3) = e-164
 Identities = 54/88 (61%), Positives = 70/88 (79%)
 Frame = +3

Query: 159 NFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLEELKL 338
           +FVQPAI +FDG+YDHW+MLMENF RSKEYW +V  G   +    VL +AQ+K +E+ +L
Sbjct: 30  SFVQPAISKFDGYYDHWAMLMENFLRSKEYWGLVVNGVPAVAEDAVLTDAQRKHIEDQQL 89

Query: 339 RDMKVKNYLFQAIDRTILETILEKNTSK 422
           +D+K KNYLFQA+DR+ILETIL K T+K
Sbjct: 90  KDLKAKNYLFQALDRSILETILNKKTTK 117



 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/102 (78%), Positives = 90/102 (88%)
 Frame = +2

Query: 1640 NGIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPT 1819
            +GI+RQL AAYTPQQNGVA RKNRTIMNM+ SMLS KK+PKTFWPEAVNWTVHVLNRSPT
Sbjct: 599  HGIRRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSAKKLPKTFWPEAVNWTVHVLNRSPT 658

Query: 1820 LVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
              V+N TPEEAW  +KPSV+YFRV G +SHVH+PD KRTKL+
Sbjct: 659  FAVQNKTPEEAWGKLKPSVDYFRVFGCLSHVHVPDSKRTKLD 700


>gb|KYP42102.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  330 bits (845), Expect(3) = e-158
 Identities = 162/273 (59%), Positives = 203/273 (74%), Gaps = 2/273 (0%)
 Frame = +1

Query: 826  QFFNKAVVECYKYHKLGHFQYECPSLEKEANYAEHR--NEEKMLLMSYVEIDEAKSNDVW 999
            Q FNKA VE +  HKLGHFQ+EC   +  AN+AE +  +EE MLLM+YVE  E    D+W
Sbjct: 240  QNFNKATVESFACHKLGHFQWECN--KGVANFAESQVESEEHMLLMAYVEEIEQHKTDMW 297

Query: 1000 FLDSGCSNHMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVFF 1179
            FLDSGCSNHMCG++  F +LDE+F   VKLGNNS + V GKGNIRLK+     +++ VF+
Sbjct: 298  FLDSGCSNHMCGKREYFSDLDENFTDLVKLGNNSNIVVNGKGNIRLKIDGIISIISGVFY 357

Query: 1180 VPELKNNLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGATKLKKP 1359
            V ELKNNLLS+GQLQEKGL+IL Q   CKIYHP+KGLI++  M +N MF L   +     
Sbjct: 358  VLELKNNLLSLGQLQEKGLSILFQQGHCKIYHPDKGLIMKANMFANRMFILHSISLPISS 417

Query: 1360 ECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDA 1539
             CF   T+DV+HLWH R+G+LS+KGL+TLQ+K+MV GLP  ++ +K+C DC+ GKQHRD+
Sbjct: 418  TCFKIATEDVAHLWHCRFGHLSFKGLQTLQQKEMVKGLPLLKSPSKLCKDCIAGKQHRDS 477

Query: 1540 FPKKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            FP KS+WRASQ LQL+HADICGPI P SNS  R
Sbjct: 478  FPIKSSWRASQILQLVHADICGPIKPASNSNKR 510



 Score =  147 bits (371), Expect(3) = e-158
 Identities = 72/125 (57%), Positives = 92/125 (73%), Gaps = 7/125 (5%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           + IWDSMKKKY+G  RVKR+ LQALRKE+E   MK GE++++Y +R++ + NKM+  GE 
Sbjct: 93  KSIWDSMKKKYQGTTRVKRANLQALRKEYEIAHMKEGESVNEYIARILVITNKMKANGED 152

Query: 599 MKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE-------H*R*VL 757
           +KD  I+EKILRS+  KFNY+VCSIEESKD   LS+DELQSSL+VHE       H    L
Sbjct: 153 LKDFAIVEKILRSMTPKFNYVVCSIEESKDTSMLSLDELQSSLLVHEQRMSNTVHEEQAL 212

Query: 758 KIEHG 772
           K+ HG
Sbjct: 213 KVTHG 217



 Score =  134 bits (336), Expect(3) = e-158
 Identities = 61/93 (65%), Positives = 73/93 (78%)
 Frame = +3

Query: 144 MTTEGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKL 323
           M TEG F+QPA+ RFDGHYDHW+MLMENF RSKEYW +VE G   +  G    EAQ+K  
Sbjct: 1   MATEGAFIQPAVPRFDGHYDHWAMLMENFLRSKEYWGVVENGVSLVAEGVTQTEAQKKIC 60

Query: 324 EELKLRDMKVKNYLFQAIDRTILETILEKNTSK 422
           EE KL+D+K KNYLFQA+DR+ILETI+ K+TSK
Sbjct: 61  EEQKLKDLKAKNYLFQALDRSILETIINKDTSK 93


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  337 bits (863), Expect(3) = e-158
 Identities = 166/300 (55%), Positives = 211/300 (70%)
 Frame = +1

Query: 739  ALKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKEAN 918
            ALK++  D+   R                Q+FNKA VECY  HKLG+F++ECPS E EAN
Sbjct: 210  ALKITHGDQYGGRGRGRGSFGGRGRGRGRQYFNKATVECYNCHKLGNFKWECPSKENEAN 269

Query: 919  YAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLGNN 1098
            YA+   +E+MLLM+YV++++A   D+WFLDSGCSNHMCG K  F + D SFR +VKLGNN
Sbjct: 270  YAD--TQEEMLLMAYVDMNKAHREDMWFLDSGCSNHMCGTKEYFLDFDGSFRDSVKLGNN 327

Query: 1099 SKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHP 1278
            + M V GKG               VF+VPELKNNLLSIGQLQEKGL IL Q  KCK++HP
Sbjct: 328  TSMVVTGKG---------------VFYVPELKNNLLSIGQLQEKGLTILFQSGKCKVFHP 372

Query: 1279 EKGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKK 1458
            E+G+I +++M+SN MF L   ++     CF   T+D+ HLWH RYG+LS+KGL+TLQ+KK
Sbjct: 373  ERGVITEMKMSSNRMFMLHAISQPIASTCFNAITEDIVHLWHCRYGHLSFKGLKTLQQKK 432

Query: 1459 MVHGLPQFEASTKVCTDCMIGKQHRDAFPKKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            MV+GLPQ ++  ++C DC++GKQ R +FP KSTWRASQ L L+HADI GPI PISNSK R
Sbjct: 433  MVNGLPQLKSPLRLCKDCLVGKQQRYSFPWKSTWRASQILXLVHADIXGPIKPISNSKKR 492



 Score =  144 bits (362), Expect(3) = e-158
 Identities = 66/107 (61%), Positives = 89/107 (83%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           + IWDS+K+KY+G  RVKR+ LQALRKEFE L MK+GE++++YF+R +++ANKM+  GE 
Sbjct: 92  KNIWDSLKQKYQGTTRVKRAHLQALRKEFELLHMKAGESVNEYFARTLTIANKMKANGEN 151

Query: 599 MKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
             D  ++EKILRS+  KF+Y+VCSIEESKD + L+IDELQSSL+VHE
Sbjct: 152 KGDVVVVEKILRSMTPKFDYVVCSIEESKDTNTLTIDELQSSLLVHE 198



 Score =  129 bits (324), Expect(3) = e-158
 Identities = 55/90 (61%), Positives = 74/90 (82%)
 Frame = +3

Query: 153 EGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLEEL 332
           E +FVQP + +FDGHYDHW+MLMENF RSKEYW +VE+G   +  G VL +AQ+K +++ 
Sbjct: 3   ENSFVQPTVPKFDGHYDHWAMLMENFLRSKEYWGLVESGIPTVAEGVVLTDAQRKNIDDQ 62

Query: 333 KLRDMKVKNYLFQAIDRTILETILEKNTSK 422
           KL+D+K KNYLFQA+DR++LETIL K+T+K
Sbjct: 63  KLKDLKAKNYLFQALDRSVLETILNKDTAK 92



 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/102 (81%), Positives = 90/102 (88%)
 Frame = +2

Query: 1640 NGIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPT 1819
            NGI+RQL AAYTPQQN V  RKNRTIMNM+ SM+SEKKIPK FWPEAVNWTVHVLNRSPT
Sbjct: 558  NGIRRQLTAAYTPQQNXVXERKNRTIMNMVRSMISEKKIPKPFWPEAVNWTVHVLNRSPT 617

Query: 1820 LVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
            L V+N TP EAWSGVKPSVE+FRV G ISHVH+PD KRTKL+
Sbjct: 618  LAVQNKTPXEAWSGVKPSVEHFRVFGCISHVHVPDNKRTKLD 659


>gb|KYP63625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 930

 Score =  336 bits (862), Expect(3) = e-157
 Identities = 166/274 (60%), Positives = 202/274 (73%), Gaps = 3/274 (1%)
 Frame = +1

Query: 826  QFFNKAVVECYKYHKLGHFQYECPSLEKEANYAEHR---NEEKMLLMSYVEIDEAKSNDV 996
            Q  +KA VECY  HKLGHFQ+EC   +   N+AE +    EE MLLM+YVE  E +  DV
Sbjct: 217  QNIDKATVECYNCHKLGHFQWECK--QGVTNFAESQVESAEEHMLLMAYVETKEQQKTDV 274

Query: 997  WFLDSGCSNHMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVF 1176
            WFLDS CSNHMCG+K  F  LDE+F  +VKLGNNS M V GKGNIRL V+    +++  F
Sbjct: 275  WFLDSRCSNHMCGKKEYFSELDETFSDSVKLGNNSNMVVNGKGNIRLDVNGVISIISGGF 334

Query: 1177 FVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGATKLKK 1356
            +VPELKNNLL +GQLQEKGL+IL Q  KCKIYHP+KGLI+Q  M+SN MF L   +    
Sbjct: 335  YVPELKNNLLGLGQLQEKGLSILFQQGKCKIYHPDKGLIMQSNMSSNRMFILHAISLPVA 394

Query: 1357 PECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRD 1536
            P CF T T+DV+ LWH R+G+LS+KGL+TLQ+K MV GL   +  +K+C D +IGKQHRD
Sbjct: 395  PTCFNTVTEDVAQLWHCRFGHLSFKGLQTLQQKGMVEGLAMLKPPSKLCKDYLIGKQHRD 454

Query: 1537 AFPKKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            +FP KS+WRASQ LQL+HADICGPI P+SNSK R
Sbjct: 455  SFPMKSSWRASQILQLVHADICGPIKPVSNSKKR 488



 Score =  142 bits (358), Expect(3) = e-157
 Identities = 66/107 (61%), Positives = 86/107 (80%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           + IWDSMKKKYEG  RVKR+ LQALRK+FET  MK GE++++Y  RV+ ++NKM+   + 
Sbjct: 93  KSIWDSMKKKYEGTTRVKRAHLQALRKDFETAHMKEGESVNEYLDRVLVISNKMKANCDD 152

Query: 599 MKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           +K+  ++EKILRS+  +FNY+VCSIEESKD   LSIDELQSSL+VHE
Sbjct: 153 LKEVAVVEKILRSMTSEFNYVVCSIEESKDTSILSIDELQSSLLVHE 199



 Score =  130 bits (328), Expect(3) = e-157
 Identities = 60/93 (64%), Positives = 71/93 (76%)
 Frame = +3

Query: 144 MTTEGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKL 323
           M TEG FVQPA+ RFDGHY HW+MLMENF RSKEYW +VE G      G  L EAQ+K  
Sbjct: 1   MATEGTFVQPAVPRFDGHYSHWAMLMENFLRSKEYWVVVENGVSAAAEGVTLFEAQKKTY 60

Query: 324 EELKLRDMKVKNYLFQAIDRTILETILEKNTSK 422
           E+ KL+D+  KNYLFQA+DR+ILETI+ K+TSK
Sbjct: 61  EKQKLKDLNAKNYLFQALDRSILETIINKDTSK 93



 Score =  160 bits (406), Expect = 8e-38
 Identities = 73/102 (71%), Positives = 88/102 (86%)
 Frame = +2

Query: 1640 NGIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPT 1819
            +G++RQL AAY+PQQNGVA RKNRTIMN++ SMLSEKK+PKTFWPEAVNW VHVLN  PT
Sbjct: 554  HGVQRQLTAAYSPQQNGVAERKNRTIMNLVRSMLSEKKVPKTFWPEAVNWAVHVLNHCPT 613

Query: 1820 LVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
            L VK  TPEEAWSG+KPSV++FRV G +S+ H+PD  R+KL+
Sbjct: 614  LAVKEKTPEEAWSGIKPSVQHFRVFGCVSYAHVPDNLRSKLD 655


>gb|KYP57183.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 884

 Score =  325 bits (834), Expect(3) = e-149
 Identities = 150/273 (54%), Positives = 200/273 (73%), Gaps = 1/273 (0%)
 Frame = +1

Query: 823  HQFFNKAVVECYKYHKLGHFQYECPSLEKEANYAEHRNEEKMLLMSYVEIDEAKSNDVWF 1002
            H  F+K  VECY  HKLGH+QYECP  EKE        E +MLLM+Y++  E  S D W+
Sbjct: 217  HAQFDKTRVECYHCHKLGHYQYECPDKEKETKVNLVEFEGEMLLMAYIDKKENSSGDTWY 276

Query: 1003 LDSGCSNHMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFN-HVVTEVFF 1179
            LDSGCSNHMCG K+LF N+DE+FR+TVKLG+NS ++VMGKG+I+  + +   H ++ VF+
Sbjct: 277  LDSGCSNHMCGNKSLFYNMDETFRETVKLGDNSCISVMGKGDIKFHMKNNTVHTISNVFY 336

Query: 1180 VPELKNNLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGATKLKKP 1359
            +P+LK+NL+S+GQLQE+G  I+IQ ++C+I+HPEKGLI+  +MT+N MF +     ++K 
Sbjct: 337  IPDLKSNLISMGQLQERGYIIIIQQSRCQIHHPEKGLIVDAKMTANRMFPMHIQYDIQK- 395

Query: 1360 ECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDA 1539
             CF T  QD + LWH RYG+LS+KGL+TL EK MV GLP+    T++C DC++GKQHRD+
Sbjct: 396  -CFSTRVQDPTWLWHLRYGHLSFKGLKTLHEKNMVEGLPKINCPTEICEDCIVGKQHRDS 454

Query: 1540 FPKKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            FP    WRA Q LQL+H+DICGPI P SN   R
Sbjct: 455  FPHGKAWRAQQILQLVHSDICGPINPTSNGNKR 487



 Score =  154 bits (390), Expect(3) = e-149
 Identities = 73/105 (69%), Positives = 90/105 (85%)
 Frame = +2

Query: 425 IWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQMK 604
           IWDSMK KY+G  RVKR+ LQALRKEFE L MK GE+++DYF+R +SVANKMRI+GE+++
Sbjct: 72  IWDSMKTKYQGTARVKRAQLQALRKEFEILHMKEGESVNDYFARTLSVANKMRIHGEKLE 131

Query: 605 DATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           D  ++EKILRS+  KF+Y+VCSIEES DID LSID LQSSL+VHE
Sbjct: 132 DVAVVEKILRSMTRKFDYVVCSIEESNDIDSLSIDVLQSSLLVHE 176



 Score =  101 bits (252), Expect(3) = e-149
 Identities = 48/70 (68%), Positives = 59/70 (84%)
 Frame = +3

Query: 213 MLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLEELKLRDMKVKNYLFQAIDRTIL 392
           MLMENF RSKEYWS+VE G  +   GT++ EAQ+K LE+ KL+D+K KNYLFQAIDRTIL
Sbjct: 1   MLMENFLRSKEYWSLVEIGITKPADGTIMTEAQRKTLEDQKLKDLKTKNYLFQAIDRTIL 60

Query: 393 ETILEKNTSK 422
           ETIL+K+T+K
Sbjct: 61  ETILKKDTAK 70



 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/112 (67%), Positives = 95/112 (84%)
 Frame = +2

Query: 1610 SHRFQTAR*ENGIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNW 1789
            SH F +    +GI+RQL AAYTPQQNGVA RKN+TIMNM+ SML +K IPKTFWPEAVNW
Sbjct: 543  SHNFASFCELHGIQRQLTAAYTPQQNGVAERKNQTIMNMVRSMLVKKNIPKTFWPEAVNW 602

Query: 1790 TVHVLNRSPTLVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
            +VH+LNRSPTL VKN+TP++AWS VKPSV++F++ G I++ H+PD KRTKL+
Sbjct: 603  SVHILNRSPTLAVKNITPQQAWSEVKPSVDHFKIFGCIAYAHVPDEKRTKLD 654


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  212 bits (540), Expect(4) = e-146
 Identities = 120/272 (44%), Positives = 164/272 (60%), Gaps = 1/272 (0%)
 Frame = +1

Query: 742  LKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKEANY 921
            LKV+ E+ +  R                Q FNKA+VECYK HKLGHFQYECP+ E+ ANY
Sbjct: 186  LKVTHENTSGARGRGRGMFRGRGRGRGRQGFNKALVECYKCHKLGHFQYECPNWERTANY 245

Query: 922  AEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLGNNS 1101
            AE   EE++LLM+YVEI+ +K  DVWFLDSGCSNHMCG +  F NLDE+F+ +VKLGNN+
Sbjct: 246  AELEEEEELLLMAYVEINNSKREDVWFLDSGCSNHMCGNRKWFSNLDETFKHSVKLGNNT 305

Query: 1102 KMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHPE 1281
            +M V GKGNI+L+V    H +T+              G  ++K      Q++    Y  E
Sbjct: 306  RMAVTGKGNIKLEV----HGMTQ--------------GNYKKKAW----QFS----YSME 339

Query: 1282 KGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKKM 1461
                ++  M   ++ +         P C  T+T+D++HLWH RYG+LSYKGLRTL  KKM
Sbjct: 340  S---VECIMKQRVVLS-------DSPTCLQTSTEDLAHLWHRRYGHLSYKGLRTLHYKKM 389

Query: 1462 VHGLPQFEASTKVCTDCM-IGKQHRDAFPKKS 1554
            V GLPQ  A T+  ++   + KQ+++   K++
Sbjct: 390  VKGLPQVVAPTREKSETFTMFKQYKNLVEKET 421



 Score =  163 bits (413), Expect(4) = e-146
 Identities = 73/102 (71%), Positives = 91/102 (89%)
 Frame = +2

Query: 1640 NGIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPT 1819
            +GIKRQL AAY+PQQNGVA R+NRTIMN++ S+LSEK++PK++WPEAV W  HVLNRSPT
Sbjct: 448  SGIKRQLTAAYSPQQNGVAERRNRTIMNLVRSVLSEKRVPKSYWPEAVKWITHVLNRSPT 507

Query: 1820 LVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
            LVV+++TPEEAWSG+KP+V+YFRV G I+H HIPD KRTK +
Sbjct: 508  LVVQDVTPEEAWSGIKPNVDYFRVFGCIAHAHIPDAKRTKFD 549



 Score =  134 bits (336), Expect(4) = e-146
 Identities = 59/108 (54%), Positives = 90/108 (83%)
 Frame = +2

Query: 416 IQKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGE 595
           ++ + DSM++K++G+ +VKR+ LQ LR+EFE L M+ GE +++YF+R ++VANKM+ +GE
Sbjct: 65  LKDLKDSMRQKFQGSTKVKRAQLQTLRREFEVLGMREGEKVNEYFARTLTVANKMKAHGE 124

Query: 596 QMKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           +M+D  I+EKILRS+  K++Y+VCSIEES D+  ++IDELQSSL+VHE
Sbjct: 125 RMEDLVIVEKILRSMTRKYDYVVCSIEESNDLTTMTIDELQSSLLVHE 172



 Score = 83.6 bits (205), Expect(4) = e-146
 Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = +3

Query: 153 EGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGY-VELEHGTVLAEAQQKKLEE 329
           E NFVQPAI RFDG+YDHW+MLMENF RSKEYW +VE G       G    EAQ+K  E+
Sbjct: 3   ETNFVQPAIPRFDGYYDHWAMLMENFLRSKEYWHMVEIGIPAAAAEGGEGTEAQRKLRED 62

Query: 330 LKLRDMK 350
            KL+D+K
Sbjct: 63  AKLKDLK 69


>emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]
          Length = 1095

 Score =  332 bits (852), Expect(3) = e-145
 Identities = 166/300 (55%), Positives = 203/300 (67%)
 Frame = +1

Query: 739  ALKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKEAN 918
            ALKV+ ++R                    Q  N+A VECY+ H+LGHFQY+CP+  KEAN
Sbjct: 149  ALKVTIDERIGTGGRGRNSYRGRGRGRGRQALNRATVECYRCHQLGHFQYDCPTWNKEAN 208

Query: 919  YAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLGNN 1098
            YAE    E +LLM+YVE  EAK NDVWFLDSG SNHMCG+  +F  LDESFRQ VKLGNN
Sbjct: 209  YAELEEHEDVLLMAYVEEQEAKHNDVWFLDSGYSNHMCGDARMFSELDESFRQQVKLGNN 268

Query: 1099 SKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHP 1278
            S++T+ G+GN+RL+++ FN+V+  VF+VPELKNNLLSIGQLQEKGLAI+I    CKIYHP
Sbjct: 269  SRITMKGRGNVRLQLNGFNYVLKAVFYVPELKNNLLSIGQLQEKGLAIMIHDGLCKIYHP 328

Query: 1279 EKGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKK 1458
             KGLIIQ  M++N MF L    + KK  CF  ++Q++ HLWH RYG+LS+KGL  L  K 
Sbjct: 329  GKGLIIQTAMSTNRMFTLLTNKQEKKEVCFQASSQELYHLWHRRYGHLSHKGLNILXTKN 388

Query: 1459 MVHGLPQFEASTKVCTDCMIGKQHRDAFPKKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            MV GLP    +T  CTDC+ GKQHRD  PKK              +ICGP+TP SN K R
Sbjct: 389  MVRGLPHLLPTTLXCTDCLNGKQHRDPIPKK--------------NICGPVTPTSNGKKR 434



 Score =  176 bits (447), Expect(3) = e-145
 Identities = 86/107 (80%), Positives = 99/107 (92%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           ++IWDSMKKKYEGN RVKRSILQALR++FETL+MKSGE I+DYFSRVMSV+NKMR +GEQ
Sbjct: 31  KQIWDSMKKKYEGNARVKRSILQALRRDFETLEMKSGECITDYFSRVMSVSNKMRFHGEQ 90

Query: 599 MKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           M++ TI+EKILRSL + FNYIVCSIEESKD D L+IDELQSSLIVHE
Sbjct: 91  MREVTIVEKILRSLTDNFNYIVCSIEESKDTDTLTIDELQSSLIVHE 137



 Score = 58.9 bits (141), Expect(3) = e-145
 Identities = 27/32 (84%), Positives = 32/32 (100%)
 Frame = +3

Query: 330 LKLRDMKVKNYLFQAIDRTILETILEKNTSKR 425
           +KL+D+KVKNYLFQAIDRTILETIL+KNTSK+
Sbjct: 1   MKLKDLKVKNYLFQAIDRTILETILQKNTSKQ 32



 Score = 96.3 bits (238), Expect = 5e-17
 Identities = 42/51 (82%), Positives = 48/51 (94%)
 Frame = +2

Query: 1745 EKKIPKTFWPEAVNWTVHVLNRSPTLVVKNMTPEEAWSGVKPSVEYFRVSG 1897
            EKKIPKTFWPEAVNWT++VLNRSP + VKN+TPEEAWSGVKP+VE+FRV G
Sbjct: 486  EKKIPKTFWPEAVNWTMYVLNRSPIVAVKNVTPEEAWSGVKPTVEHFRVFG 536


>gb|KYP50277.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 442

 Score =  246 bits (627), Expect(3) = e-144
 Identities = 108/199 (54%), Positives = 149/199 (74%)
 Frame = +1

Query: 835  NKAVVECYKYHKLGHFQYECPSLEKEANYAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSG 1014
            N+A +EC+K HKL H++ ECP  +KEA+YA    EE++LLM+  ++   ++ + WFLDSG
Sbjct: 237  NRATIECFKCHKLEHYKNECPDWDKEAHYAAFNEEEELLLMADEDLHGVQTTNAWFLDSG 296

Query: 1015 CSNHMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPELK 1194
            CSNHMCG +A F  +D++F+Q VKLGNN++M V GKG++RL +    H++T+VF VPELK
Sbjct: 297  CSNHMCGNRAWFKEVDDTFKQHVKLGNNTRMEVTGKGSVRLNIKGVTHIITDVFLVPELK 356

Query: 1195 NNLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGATKLKKPECFYT 1374
            NNLLSIGQLQEKGL ++ Q   CK+YHP+KGLI++  MT+N MF L   +  KK  CF+ 
Sbjct: 357  NNLLSIGQLQEKGLTVMFQSGTCKLYHPDKGLILETNMTTNRMFILFAQSATKKDSCFHI 416

Query: 1375 TTQDVSHLWHYRYGYLSYK 1431
            +TQD+S LWH RY +LS+K
Sbjct: 417  STQDLSSLWHRRYAHLSHK 435



 Score =  176 bits (445), Expect(3) = e-144
 Identities = 90/108 (83%), Positives = 99/108 (91%), Gaps = 1/108 (0%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           ++IWDSMK+KYEGN RVKRSILQ LRKEFE L+MKSGE+I+DYFSRVMSVA+KMR YGEQ
Sbjct: 95  KEIWDSMKRKYEGNARVKRSILQGLRKEFEILEMKSGESITDYFSRVMSVASKMRTYGEQ 154

Query: 599 MKDATIIEKILRSLREKFNYIV-CSIEESKDIDCLSIDELQSSLIVHE 739
           M+D  I+EKILRSL EKFNYIV CSIEESKDID LSIDELQSSLIVHE
Sbjct: 155 MQDVIIVEKILRSLTEKFNYIVFCSIEESKDIDSLSIDELQSSLIVHE 202



 Score =  143 bits (361), Expect(3) = e-144
 Identities = 65/90 (72%), Positives = 80/90 (88%)
 Frame = +3

Query: 153 EGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLEEL 332
           + +FVQPAI RFDGHYDHWSMLMENF RSKEYWS+VETG+ + E G+  +E Q++K +E+
Sbjct: 6   DSSFVQPAIPRFDGHYDHWSMLMENFLRSKEYWSLVETGFEDSEKGSAASEDQKRKRDEM 65

Query: 333 KLRDMKVKNYLFQAIDRTILETILEKNTSK 422
           KL+D++VKNYLFQAIDRTILETIL+KNTSK
Sbjct: 66  KLKDLQVKNYLFQAIDRTILETILQKNTSK 95


>gb|KYP60819.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 722

 Score =  308 bits (789), Expect(3) = e-142
 Identities = 147/270 (54%), Positives = 197/270 (72%), Gaps = 5/270 (1%)
 Frame = +1

Query: 844  VVECYKYHKLGHFQYECPSLEKEANYAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSN 1023
            ++ECY+  KLGHFQYECP+    A   E  +E++MLLMSYVE+   K +++WFLDSGCSN
Sbjct: 225  LIECYRCRKLGHFQYECPTYANYAEDTELDDEQEMLLMSYVEMQGDKRDEIWFLDSGCSN 284

Query: 1024 HMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNL 1203
            HM G++  F  LD+SFR +VKLGN+ K+ VMGKGN+R+K+      +TEVF+ P+LK+NL
Sbjct: 285  HMSGDRKWFTELDQSFRHSVKLGNDFKLNVMGKGNVRMKLGGRTVTITEVFYTPDLKSNL 344

Query: 1204 LSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGA-----TKLKKPECF 1368
            LSIGQLQE+ L+ILI+   C IYH  +GLII+  +++N MF LT +     T + K  C 
Sbjct: 345  LSIGQLQERNLSILIKNGCCSIYHDTEGLIIRTTISANRMFVLTASIPVVDTNISKAACL 404

Query: 1369 YTTTQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDAFPK 1548
              T+++++ LWH R+G+L+ KGLRTL  +KMV GLP  +   K+CT CM GKQ R +FP+
Sbjct: 405  NVTSENITSLWHQRFGHLNMKGLRTLAYRKMVQGLPILKNQFKLCTICMTGKQQRHSFPQ 464

Query: 1549 KSTWRASQKLQLIHADICGPITPISNSKMR 1638
            KSTWRAS+ LQLIH+DICGPITP S+S  R
Sbjct: 465  KSTWRASKPLQLIHSDICGPITPESHSHKR 494



 Score =  146 bits (368), Expect(3) = e-142
 Identities = 68/106 (64%), Positives = 90/106 (84%)
 Frame = +2

Query: 425 IWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQMK 604
           +WDSMK+KY+GN RV+R+ LQ LR+EFE L+M++GE ++DY SRVM +AN MR  GE M+
Sbjct: 93  LWDSMKQKYQGNARVQRAQLQRLRREFEILEMQNGECVNDYISRVMIIANDMRGAGEAME 152

Query: 605 DATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHEH 742
           D  I+EKILR+L +K+NYIVCSIEESKDI+ + +DELQSSL++HEH
Sbjct: 153 DGHIVEKILRTLSDKYNYIVCSIEESKDINEMMVDELQSSLLIHEH 198



 Score =  103 bits (257), Expect(3) = e-142
 Identities = 50/83 (60%), Positives = 61/83 (73%)
 Frame = +3

Query: 174 AIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLEELKLRDMKV 353
           +I +FDG YDHWSMLMEN  RSKEYWS+VE GY E +    L  A++K LE  KL D++ 
Sbjct: 9   SIPKFDGDYDHWSMLMENLLRSKEYWSVVEQGYEEPKILESLTGAERKTLETQKLNDLRA 68

Query: 354 KNYLFQAIDRTILETILEKNTSK 422
           KNYLFQ+ID+ IL+TI  K TSK
Sbjct: 69  KNYLFQSIDKNILKTITNKATSK 91



 Score =  130 bits (328), Expect = 3e-28
 Identities = 60/102 (58%), Positives = 75/102 (73%)
 Frame = +2

Query: 1640 NGIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPT 1819
            NGI RQL   Y+PQQNGVA R+NRT+MNM+  ML+ + +PK +WPEA N   H+LNR PT
Sbjct: 560  NGITRQLTTPYSPQQNGVAERRNRTLMNMVRCMLTARDVPKEYWPEAANLATHILNRCPT 619

Query: 1820 LVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
             V+ NMTPEEAW   KPSV + +V G I +VH+PDV R KL+
Sbjct: 620  SVLPNMTPEEAWKERKPSVTHLKVFGCIGYVHVPDVTRKKLD 661


>gb|KYP60712.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1110

 Score =  308 bits (789), Expect(3) = e-135
 Identities = 147/270 (54%), Positives = 197/270 (72%), Gaps = 5/270 (1%)
 Frame = +1

Query: 844  VVECYKYHKLGHFQYECPSLEKEANYAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSN 1023
            ++ECY+  KLGHFQYECP+    A   E  +E++MLLMSYVE+   K +++WFLDSGCSN
Sbjct: 204  LIECYRCRKLGHFQYECPTYANYAEDTELDDEQEMLLMSYVEMQGDKRDEIWFLDSGCSN 263

Query: 1024 HMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNL 1203
            HM G++  F  LD+SFR +VKLGN+ K+ VMGKGN+R+K+      +TEVF+ P+LK+NL
Sbjct: 264  HMSGDRKWFTELDQSFRHSVKLGNDFKLNVMGKGNVRMKLGGRTVTITEVFYTPDLKSNL 323

Query: 1204 LSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGA-----TKLKKPECF 1368
            LSIGQLQE+ L+ILI+   C IYH  +GLII+  +++N MF LT +     T + K  C 
Sbjct: 324  LSIGQLQERNLSILIKNGCCSIYHDTEGLIIRTTISANRMFVLTASIPVVDTNISKAACL 383

Query: 1369 YTTTQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDAFPK 1548
              T+++++ LWH R+G+L+ KGLRTL  +KMV GLP  +   K+CT CM GKQ R +FP+
Sbjct: 384  NVTSENITSLWHQRFGHLNMKGLRTLAYRKMVQGLPILKNQFKLCTICMTGKQQRHSFPQ 443

Query: 1549 KSTWRASQKLQLIHADICGPITPISNSKMR 1638
            KSTWRAS+ LQLIH+DICGPITP S+S  R
Sbjct: 444  KSTWRASKPLQLIHSDICGPITPESHSHKR 473



 Score =  146 bits (368), Expect(3) = e-135
 Identities = 68/106 (64%), Positives = 90/106 (84%)
 Frame = +2

Query: 425 IWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQMK 604
           +WDSMK+KY+GN RV+R+ LQ LR+EFE L+M++GE ++DY SRVM +AN MR  GE M+
Sbjct: 72  LWDSMKQKYQGNARVQRAQLQRLRREFEILEMQNGECVNDYISRVMIIANDMRGAGEAME 131

Query: 605 DATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHEH 742
           D  I+EKILR+L +K+NYIVCSIEESKDI+ + +DELQSSL++HEH
Sbjct: 132 DGHIVEKILRTLSDKYNYIVCSIEESKDINEMMVDELQSSLLIHEH 177



 Score = 81.3 bits (199), Expect(3) = e-135
 Identities = 41/70 (58%), Positives = 50/70 (71%)
 Frame = +3

Query: 213 MLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLEELKLRDMKVKNYLFQAIDRTIL 392
           MLMEN  RSKEYWS+VE GY E +    L  A++K LE  KL D++ KNYLFQ+ID+ IL
Sbjct: 1   MLMENLLRSKEYWSVVEQGYEEPKILESLTGAERKTLETQKLNDLRAKNYLFQSIDKNIL 60

Query: 393 ETILEKNTSK 422
           +TI  K TSK
Sbjct: 61  KTITNKATSK 70



 Score =  130 bits (328), Expect = 6e-28
 Identities = 60/102 (58%), Positives = 75/102 (73%)
 Frame = +2

Query: 1640 NGIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPT 1819
            NGI RQL   Y+PQQNGVA R+NRT+MNM+  ML+ + +PK +WPEA N   H+LNR PT
Sbjct: 539  NGITRQLTTPYSPQQNGVAERRNRTLMNMVRCMLTARDVPKEYWPEAANLATHILNRCPT 598

Query: 1820 LVVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
             V+ NMTPEEAW   KPSV + +V G I +VH+PDV R KL+
Sbjct: 599  SVLPNMTPEEAWKERKPSVTHLKVFGCIGYVHVPDVTRKKLD 640


>emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
          Length = 1226

 Score =  352 bits (902), Expect(2) = e-134
 Identities = 165/301 (54%), Positives = 217/301 (72%)
 Frame = +1

Query: 739  ALKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKEAN 918
            ALKV+  D +  R                + F+KA VECY  HKLGHF +ECP  E  A 
Sbjct: 154  ALKVTHGDHSGSRGRGHGNYRGRGRGRNRRSFDKATVECYNCHKLGHFAWECPHRETGAY 213

Query: 919  YAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLGNN 1098
            YA  +N+E+MLLM+YV++++    D WFLDSGC+NHMCG+K  F + D +FR +VKL NN
Sbjct: 214  YA--KNQEEMLLMAYVDLNKTSREDTWFLDSGCNNHMCGKKDYFSDFDGTFRDSVKLXNN 271

Query: 1099 SKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHP 1278
            + M V+GKGN+RLKV++   ++T VF+VPELKNNLLSIGQLQEKGL IL Q+ KCK++H 
Sbjct: 272  TSMXVLGKGNVRLKVNEMTQIITGVFYVPELKNNLLSIGQLQEKGLTILFQHGKCKVFHS 331

Query: 1279 EKGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSHLWHYRYGYLSYKGLRTLQEKK 1458
            +K LI+  +M+SN MF L   ++     CF T T D+  LWH RYG+LS++GL+TLQ++K
Sbjct: 332  QKXLIMDTKMSSNRMFMLHALSQPISSTCFNTVTADILQLWHCRYGHLSFQGLQTLQQRK 391

Query: 1459 MVHGLPQFEASTKVCTDCMIGKQHRDAFPKKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            MV+GLPQF+  +K+C DC++GKQHR + PKKS WRA++ L L+HADICGPI PISNSK R
Sbjct: 392  MVNGLPQFQPPSKLCKDCLVGKQHRSSIPKKSNWRAAEILLLVHADICGPINPISNSKKR 451

Query: 1639 K 1641
            K
Sbjct: 452  K 452



 Score =  157 bits (398), Expect(2) = e-134
 Identities = 74/97 (76%), Positives = 83/97 (85%)
 Frame = +2

Query: 1655 QLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPTLVVKN 1834
            +L AAYTPQ NGVA RKNRTIMNM+ SMLS KK+PKTFWPEAVNWTVH LNRSPT  V+N
Sbjct: 480  KLTAAYTPQXNGVAERKNRTIMNMVRSMLSAKKLPKTFWPEAVNWTVHGLNRSPTFAVQN 539

Query: 1835 MTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
             TPEEAW  +KPSV+YFRV G +SHVH+PD KRTKL+
Sbjct: 540  KTPEEAWGKLKPSVDYFRVFGCLSHVHVPDSKRTKLD 576



 Score =  123 bits (308), Expect(2) = 5e-43
 Identities = 56/93 (60%), Positives = 72/93 (77%)
 Frame = +3

Query: 144 MTTEGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKL 323
           MTTE +FVQP I +FDG+YDHW+MLMENF RSKEYW +V  G   +    VL +AQ+K +
Sbjct: 1   MTTESSFVQPTIPKFDGYYDHWAMLMENFLRSKEYWGLVVNGVPAVAEDVVLXDAQRKHI 60

Query: 324 EELKLRDMKVKNYLFQAIDRTILETILEKNTSK 422
           E+ +L+D+K KNYLFQA+D +ILETIL K T+K
Sbjct: 61  EDQQLKDLKAKNYLFQALDCSILETILNKKTTK 93



 Score = 82.0 bits (201), Expect(2) = 5e-43
 Identities = 36/58 (62%), Positives = 49/58 (84%)
 Frame = +2

Query: 425 IWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           IWDSMK+K++G  RVKR  LQALRKEFE L MKSGET+++YFSR ++++NKM++  E+
Sbjct: 95  IWDSMKQKFQGTTRVKRGNLQALRKEFEILHMKSGETVNEYFSRTLAISNKMKVNEEE 152


>gb|KYP37051.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1079

 Score =  304 bits (778), Expect(3) = e-130
 Identities = 149/308 (48%), Positives = 207/308 (67%), Gaps = 9/308 (2%)
 Frame = +1

Query: 742  LKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKEANY 921
            LKV+ +DR                    Q FNKA++EC++ HKLGHFQYECP +EK A+Y
Sbjct: 187  LKVTHDDREGAGRGRGRGNRGRGRGRGRQPFNKALIECFQCHKLGHFQYECPGVEKRAHY 246

Query: 922  AEHRN----EEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNL-DESFRQTVK 1086
                     E+++LL++Y E+      + WFLDSGCSNHM G K  F  + +E   +TVK
Sbjct: 247  TTFEEATEVEDEILLVAYEEVTHVVQMEDWFLDSGCSNHMTGNKLWFTEIHEEGLHKTVK 306

Query: 1087 LGNNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCK 1266
            LGN++ + V  KGNIR+++++  HV+++V++VPELK NLLS+GQLQEKGL ILIQ+  CK
Sbjct: 307  LGNDTTLEVAAKGNIRVQINNIAHVISDVYYVPELKTNLLSLGQLQEKGLTILIQHGACK 366

Query: 1267 IYHPEKGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSH----LWHYRYGYLSYKG 1434
            I+HP++GLII   M  + MF L+ +   +   CF    +D+S     LWH R+G+L+++G
Sbjct: 367  IFHPDRGLIIHTTMRGDRMFYLSASMFPQHSRCFQV--EDISEKEMQLWHRRFGHLNFRG 424

Query: 1435 LRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDAFPKKSTWRASQKLQLIHADICGPIT 1614
            L TL +++MV GLP  + ST VCT C++GKQHRD  PK S+WRAS KLQL+HA++CGPI+
Sbjct: 425  LNTLAQEQMVIGLPSLKISTVVCTTCLVGKQHRDTIPKLSSWRASTKLQLVHANVCGPIS 484

Query: 1615 PISNSKMR 1638
            P SNS  R
Sbjct: 485  PASNSGKR 492



 Score =  134 bits (337), Expect(3) = e-130
 Identities = 64/107 (59%), Positives = 81/107 (75%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           Q IW SM++KY+G+ RVKR+ LQALR+EFE L MK GE +  Y  R +SV NKM+  GE 
Sbjct: 68  QAIWRSMQQKYQGSMRVKRAQLQALRREFELLAMKDGEKVDSYLGRTLSVVNKMKSNGEV 127

Query: 599 MKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           M  +T++ KILRSL  KFNY+VCSIEES D++ LS+DEL  SL+VHE
Sbjct: 128 MDSSTVVSKILRSLTTKFNYVVCSIEESNDLNTLSLDELHGSLLVHE 174



 Score = 79.3 bits (194), Expect(3) = e-130
 Identities = 40/70 (57%), Positives = 52/70 (74%)
 Frame = +3

Query: 213 MLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLEELKLRDMKVKNYLFQAIDRTIL 392
           M MENF RSKE W +VE G   L  G    EAQ++ + E +L+D+KVKN+LFQAIDR IL
Sbjct: 1   MTMENFLRSKELWQLVEDGIPTL--GATPTEAQRRSVAEAQLKDLKVKNFLFQAIDREIL 58

Query: 393 ETILEKNTSK 422
           ET+L+K+TS+
Sbjct: 59  ETMLDKSTSQ 68



 Score =  140 bits (352), Expect = 6e-31
 Identities = 63/101 (62%), Positives = 79/101 (78%)
 Frame = +2

Query: 1643 GIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPTL 1822
            GI RQL AAYTPQQNGVA RKNRTIMN + ++L EK++ K+FWPE V W VH+ NRSPT 
Sbjct: 559  GISRQLTAAYTPQQNGVAERKNRTIMNAVRAVLHEKQVSKSFWPEVVRWCVHIQNRSPTT 618

Query: 1823 VVKNMTPEEAWSGVKPSVEYFRVSGFISHVHIPDVKRTKLE 1945
             + + T EE WSG+KP V+YFR  G ++HVHIPD +R+KL+
Sbjct: 619  AIDHGTLEEVWSGIKPRVDYFRTFGCVAHVHIPDQRRSKLD 659


>gb|KYP36250.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 401

 Score =  303 bits (777), Expect(3) = e-121
 Identities = 138/241 (57%), Positives = 189/241 (78%)
 Frame = +1

Query: 832  FNKAVVECYKYHKLGHFQYECPSLEKEANYAEHRNEEKMLLMSYVEIDEAKSNDVWFLDS 1011
            F K+ VECY  H+LGHF +EC +  +EANY E  NEE+MLLM + +I +A  + VWFLDS
Sbjct: 162  FEKSTVECYTCHQLGHFSWECSNQRREANYVE--NEEEMLLMVHNDITKATEDIVWFLDS 219

Query: 1012 GCSNHMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPEL 1191
            GCSNHMC +K  F +LDE+++ +VKLGNNS MTV+GKGN+RL+++   ++VT+VFFVP+L
Sbjct: 220  GCSNHMCEKKEYFSDLDETYKDSVKLGNNSSMTVVGKGNVRLRMNGTTYIVTDVFFVPDL 279

Query: 1192 KNNLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGATKLKKPECFY 1371
            +NNLLSIGQLQEKGL+IL Q+ KCK++HPE GL+I+ +++SN M+ L  ++   K  CF+
Sbjct: 280  RNNLLSIGQLQEKGLSILFQHGKCKVFHPENGLVIETKISSNRMYLLHVSSPPAKSTCFH 339

Query: 1372 TTTQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDAFPKK 1551
            + T+D  HLWH RYG+LS++GL TL ++ MV+GLP  +A T +C DC+IGKQ RD+FPKK
Sbjct: 340  SVTEDKMHLWHCRYGHLSFQGLNTLYQQDMVYGLPMMKAPTNLCQDCLIGKQSRDSFPKK 399

Query: 1552 S 1554
            S
Sbjct: 400  S 400



 Score =  135 bits (340), Expect(3) = e-121
 Identities = 63/108 (58%), Positives = 83/108 (76%)
 Frame = +2

Query: 425 IWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQMK 604
           IWDS+K+KY G  RVKR+ LQALR+EFE L MK GE+++DYF+R +++ANKM+  GE   
Sbjct: 34  IWDSLKQKYHGTSRVKRAQLQALRREFEILHMKEGESVNDYFARTLTIANKMKANGEDKG 93

Query: 605 DATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHEH*R 748
           D  ++EKILRS+  KF+Y+VCSIEESK+ D L+IDELQ+  I   H R
Sbjct: 94  DVAVVEKILRSMTPKFDYVVCSIEESKETDTLTIDELQNQQIAQGHNR 141



 Score = 49.3 bits (116), Expect(3) = e-121
 Identities = 21/30 (70%), Positives = 29/30 (96%)
 Frame = +3

Query: 333 KLRDMKVKNYLFQAIDRTILETILEKNTSK 422
           +L+D+KVKNYLFQA+DR +LETIL+K+T+K
Sbjct: 3   QLKDLKVKNYLFQALDRLVLETILKKDTTK 32


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  397 bits (1021), Expect = e-118
 Identities = 181/271 (66%), Positives = 223/271 (82%)
 Frame = +1

Query: 826  QFFNKAVVECYKYHKLGHFQYECPSLEKEANYAEHRNEEKMLLMSYVEIDEAKSNDVWFL 1005
            Q FNKA+VECYK H+LGHFQYECP  EKEANYAE   +E+MLLMSYVE+++++  DVWFL
Sbjct: 180  QTFNKAIVECYKCHQLGHFQYECPKWEKEANYAELEEKEEMLLMSYVELNQSRREDVWFL 239

Query: 1006 DSGCSNHMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVFFVP 1185
            DSGCSNHMC  K  F +LDE FRQ+VKLGNNSKM V+GK NIRL+++    V+T+VF++P
Sbjct: 240  DSGCSNHMCANKEWFLDLDEEFRQSVKLGNNSKMAVLGKDNIRLQIAGVTQVITDVFYIP 299

Query: 1186 ELKNNLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGATKLKKPEC 1365
            ELKNNLLS+GQLQE+G+AILIQ+  C++YHP+KGLI+Q  M++  MF L+     K P C
Sbjct: 300  ELKNNLLSVGQLQERGVAILIQHGVCRVYHPKKGLIMQTAMSTKRMFILSARILSKAPTC 359

Query: 1366 FYTTTQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDAFP 1545
            F T  +D +HLWH RYG+LS+KGLRTLQ K+MV GLPQ +A +K+CTDCM+GKQHRDA P
Sbjct: 360  FQTILEDNTHLWHCRYGHLSFKGLRTLQYKQMVRGLPQLKAPSKICTDCMVGKQHRDAIP 419

Query: 1546 KKSTWRASQKLQLIHADICGPITPISNSKMR 1638
            K+S WRASQ+LQL+HADICGPI PISNSK R
Sbjct: 420  KRSLWRASQRLQLVHADICGPIKPISNSKKR 450



 Score = 98.6 bits (244), Expect = 1e-17
 Identities = 48/82 (58%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
 Frame = +3

Query: 144 MTTEGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKL 323
           M  E NFVQPAI +FDGHYDHWSMLMENF RSKEYWS+VE G      G    EAQQK +
Sbjct: 1   MAAENNFVQPAIPKFDGHYDHWSMLMENFLRSKEYWSLVEIGIPAAAEGVEFTEAQQKSI 60

Query: 324 EELKLRDMK----VKNYLFQAI 377
            + KL+D+K    VK    QA+
Sbjct: 61  ADQKLKDLKGSTRVKRAQLQAL 82



 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 44/85 (51%), Positives = 60/85 (70%)
 Frame = +2

Query: 407 EEHIQKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRI 586
           E   + I D   K  +G+ RVKR+ LQALRKEFE L MK GE++  YF+R + +ANKM+I
Sbjct: 54  EAQQKSIADQKLKDLKGSTRVKRAQLQALRKEFEVLQMKEGESVDAYFARTLIIANKMKI 113

Query: 587 YGEQMKDATIIEKILRSLREKFNYI 661
           +GE M+   IIEKILRS+  +F+Y+
Sbjct: 114 HGENMQQVVIIEKILRSMTSRFDYV 138



 Score = 73.2 bits (178), Expect = 1e-09
 Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 8/221 (3%)
 Frame = +1

Query: 988  NDVWFLDSGCSNHMCGEKALFCNLDESFRQ-TVKLGNNSKMTVMGKGNIRLKVSDFNHVV 1164
            +  W  DS C NHM    +LF  LD +     + + + S M     GN    VS  N  V
Sbjct: 1461 SQTWLFDSACXNHMTPHSSLFSKLDPAPHPLNIHIADGSTM----HGNSLGFVSTSNLSV 1516

Query: 1165 TEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGA- 1341
              VF VP+L  NL S+GQL E G  ++  Y+ C +  P  G  +        MF ++   
Sbjct: 1517 PGVFHVPDLSYNLCSVGQLAELGYRLIFXYSGCIVQDPRTGXELGTGPRVGXMFPVSNLH 1576

Query: 1342 TKLKKPECFYTTTQDVSH-----LWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCT 1506
                 P    T    VS      L H R G+ S   ++ L  + +   L         CT
Sbjct: 1577 LPPVAPVSIATAAAAVSSLPSLALXHSRLGHXSSSRVQQLVSRGL---LGSXSKDIFXCT 1633

Query: 1507 DCMIGKQHRDAFPKKSTWRASQKL-QLIHADICGPITPISN 1626
             C + KQ   A P  +    S  + +LIH+D+ GP +P+++
Sbjct: 1634 SCXLXKQ--PALPFNNXESISNSIFELIHSDVWGP-SPVAS 1671



 Score = 68.6 bits (166), Expect = 3e-08
 Identities = 50/140 (35%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
 Frame = +2

Query: 1529 IEMHFQKKALGEPLKNFNSF-MLTYVALSHRFQTAR*ENGIKRQLIAAYTPQQNGVAGRK 1705
            IE  F K+     +K F S   L Y    H FQ      G    L    T QQNG A RK
Sbjct: 1711 IETQFSKR-----IKTFRSDNALEYT--QHAFQALLHSYGTVHHLTCPGTSQQNGRAERK 1763

Query: 1706 NRTIMNML*SMLSEKKIPKTFWPEAVNWTVHVLNRSPTLVVKNMTPEEAWSGVKPSVEYF 1885
             R I++ + ++L   KIP  FW EA    VH +NR P+ V+ N TP E   G  P   + 
Sbjct: 1764 LRHILDTVRALLLSAKIPAPFWGEAALHAVHAINRIPSAVIHNQTPYERLFGSPPVYHHL 1823

Query: 1886 RVSGFISHVHIPDVKRTKLE 1945
            R  G    V +   +  KLE
Sbjct: 1824 RSFGSACFVLLQSHEHNKLE 1843



 Score = 63.2 bits (152), Expect = 1e-06
 Identities = 33/56 (58%), Positives = 37/56 (66%)
 Frame = +2

Query: 1607 LSHRFQTAR*ENGIKRQLIAAYTPQQNGVAGRKNRTIMNML*SMLSEKKIPKTFWP 1774
            +SH F      NGI RQL AAYTPQQNGVA RKNRTIMNM+  M  E K  + + P
Sbjct: 467  ISHEFNVFCKANGISRQLTAAYTPQQNGVAERKNRTIMNMVRRMSEESKAYRLYDP 522


>emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]
          Length = 972

 Score =  169 bits (429), Expect(3) = e-117
 Identities = 83/107 (77%), Positives = 96/107 (89%)
 Frame = +2

Query: 419 QKIWDSMKKKYEGNQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQ 598
           ++IWDSMKKKYEGN RVKRSILQALR++FET++MKS E I+DYFSRVMSV+NKMR +GEQ
Sbjct: 95  KQIWDSMKKKYEGNARVKRSILQALRRDFETVEMKSSECITDYFSRVMSVSNKMRFHGEQ 154

Query: 599 MKDATIIEKILRSLREKFNYIVCSIEESKDIDCLSIDELQSSLIVHE 739
           M + TI+EKILR L + FNYIVCSIEESKD D L+IDELQSSLIVHE
Sbjct: 155 MLEVTIVEKILRXLTDNFNYIVCSIEESKDTDTLTIDELQSSLIVHE 201



 Score =  153 bits (387), Expect(3) = e-117
 Identities = 71/93 (76%), Positives = 82/93 (88%)
 Frame = +3

Query: 147 TTEGNFVQPAIHRFDGHYDHWSMLMENFFRSKEYWSIVETGYVELEHGTVLAEAQQKKLE 326
           T+EG F QPAI RFDGHYDHWSMLMENF RSKEYWS+VETGY E +    + EAQQK+L+
Sbjct: 4   TSEGXFAQPAIPRFDGHYDHWSMLMENFLRSKEYWSLVETGYDEPQANAAMTEAQQKRLD 63

Query: 327 ELKLRDMKVKNYLFQAIDRTILETILEKNTSKR 425
           E+KL+D+KVKNYLFQAIDRTILETIL+KNTSK+
Sbjct: 64  EMKLKDLKVKNYLFQAIDRTILETILQKNTSKQ 96



 Score =  150 bits (379), Expect(3) = e-117
 Identities = 86/206 (41%), Positives = 103/206 (50%)
 Frame = +1

Query: 739  ALKVSPEDRTWERSYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKEAN 918
            ALKV+ ++R                    Q FN+A+VECY+ H+LGHFQY+CP+  KEAN
Sbjct: 213  ALKVTTDERIGAGGRGRNSYRGRGRGRGRQAFNRAIVECYRCHQLGHFQYDCPTWNKEAN 272

Query: 919  YAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLGNN 1098
            YAE    E +LLM+YVE  EA  NDVWFLDSGCSNHMCG+  +F  L+ESFRQ    G  
Sbjct: 273  YAELEEHEDVLLMAYVEEHEAMRNDVWFLDSGCSNHMCGDARMFSELNESFRQQTTTG-- 330

Query: 1099 SKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIYHP 1278
                                                       KGLAI I    CKIYHP
Sbjct: 331  -------------------------------------------KGLAITIHDGLCKIYHP 347

Query: 1279 EKGLIIQVEMTSNIMFNLTGATKLKK 1356
             K LIIQ  M++N MF L    + KK
Sbjct: 348  NKVLIIQTAMSTNRMFTLLANKQEKK 373


>emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]
          Length = 1146

 Score =  373 bits (957), Expect(2) = e-115
 Identities = 178/302 (58%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
 Frame = +1

Query: 739  ALKVSPEDRTWER--SYXXXXXXXXXXXXXHQFFNKAVVECYKYHKLGHFQYECPSLEKE 912
            ALKV+ +DR   R  S               Q F+KA+V+CYK H+LGHFQYECP  EKE
Sbjct: 447  ALKVTYDDRIGGRGGSRARGAFQGRGRGRGGQTFSKAIVKCYKCHQLGHFQYECPKWEKE 506

Query: 913  ANYAEHRNEEKMLLMSYVEIDEAKSNDVWFLDSGCSNHMCGEKALFCNLDESFRQTVKLG 1092
            AN  E   +E+MLLMSYVE+++++  DVWFLDS CSNH C  K  F  LDE FRQ+VKLG
Sbjct: 507  ANNVELEEKEEMLLMSYVELNQSRREDVWFLDSRCSNHTCANKEWFSGLDEEFRQSVKLG 566

Query: 1093 NNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPELKNNLLSIGQLQEKGLAILIQYNKCKIY 1272
            NNSKMT++GKGNIR K++    V+T+VF++PELKNNLLS+GQLQE+G+AILIQ+  C++Y
Sbjct: 567  NNSKMTMLGKGNIRWKIAGVTQVITDVFYIPELKNNLLSVGQLQERGVAILIQHGVCRVY 626

Query: 1273 HPEKGLIIQVEMTSNIMFNLTGATKLKKPECFYTTTQDVSHLWHYRYGYLSYKGLRTLQE 1452
            HP+KG I+Q  M +N MF L      K   CF T  +D +HLWH RYG+LS+KGLRTLQ 
Sbjct: 627  HPKKGFIMQTTMYANKMFILLAKILSKASTCFQTILEDNTHLWHCRYGHLSFKGLRTLQY 686

Query: 1453 KKMVHGLPQFEASTKVCTDCMIGKQHRDAFPKKSTWRASQKLQLIHADICGPITPISNSK 1632
            K+M  GLPQ +A +K+CTDCM+ KQH+DA PK+S WRASQ+LQL+HA+ICGPI P+SNSK
Sbjct: 687  KQMGRGLPQLKAPSKICTDCMLRKQHKDAIPKRSLWRASQRLQLVHANICGPIKPVSNSK 746

Query: 1633 MR 1638
             R
Sbjct: 747  KR 748



 Score = 74.3 bits (181), Expect(2) = e-115
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = +2

Query: 458 NQRVKRSILQALRKEFETLDMKSGETISDYFSRVMSVANKMRIYGEQMKDATIIEKILRS 637
           +Q++K   LQALRKEFE L MK GE++  YF+R + +ANKM+I+GE M+   IIEKILRS
Sbjct: 367 DQKLKDLKLQALRKEFEVLQMKEGESVDAYFTRTLIIANKMKIHGENMQQVVIIEKILRS 426

Query: 638 L 640
           +
Sbjct: 427 M 427


>gb|KYP33374.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 421

 Score =  345 bits (885), Expect(2) = e-115
 Identities = 159/269 (59%), Positives = 213/269 (79%)
 Frame = +1

Query: 832  FNKAVVECYKYHKLGHFQYECPSLEKEANYAEHRNEEKMLLMSYVEIDEAKSNDVWFLDS 1011
            F+K+ VECY  H+LGHF +EC +  +EANY E  NEE+MLLM + +I +A  + VWFLDS
Sbjct: 79   FDKSTVECYTCHQLGHFSWECSNQRREANYVE--NEEEMLLMVHNDITKAIEDIVWFLDS 136

Query: 1012 GCSNHMCGEKALFCNLDESFRQTVKLGNNSKMTVMGKGNIRLKVSDFNHVVTEVFFVPEL 1191
            GCSNHMCG+K  F +LDE+++ +VKLGNNS MTV+GKGN+RL+++   ++V +V FVP+L
Sbjct: 137  GCSNHMCGKKEYFSDLDETYKDSVKLGNNSSMTVVGKGNVRLRMNGTTYIVIDVIFVPDL 196

Query: 1192 KNNLLSIGQLQEKGLAILIQYNKCKIYHPEKGLIIQVEMTSNIMFNLTGATKLKKPECFY 1371
            +NNLLSIGQLQEKGL+IL Q+ KCK++H E GL+I+ ++++N M+ L  ++   K  CF+
Sbjct: 197  RNNLLSIGQLQEKGLSILFQHGKCKVFHLENGLVIETKISANRMYLLHVSSPPAKSTCFH 256

Query: 1372 TTTQDVSHLWHYRYGYLSYKGLRTLQEKKMVHGLPQFEASTKVCTDCMIGKQHRDAFPKK 1551
            + T+D  HLWH RYG+LS++GL TL ++ MV+GLP  +A T +C DC+IGKQ RD+FPKK
Sbjct: 257  SVTKDKMHLWHCRYGHLSFQGLNTLYQQYMVYGLPMMKAPTNLCQDCLIGKQSRDSFPKK 316

Query: 1552 STWRASQKLQLIHADICGPITPISNSKMR 1638
            S WRA+Q LQLIHADICGPITPISNSK R
Sbjct: 317  SNWRATQVLQLIHADICGPITPISNSKKR 345



 Score = 99.8 bits (247), Expect(2) = e-115
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = +2

Query: 518 MKSGETISDYFSRVMSVANKMRIYGEQMKDATIIEKILRSLREKFNYIVCSIEESKDIDC 697
           MK GE+++DYF+R +++ANKM+   E   D  ++EKILRS+  KF+Y+VCSIEESKD D 
Sbjct: 1   MKEGESVNDYFARTLTIANKMKANREDKGDVAVVEKILRSMTPKFDYVVCSIEESKDTDT 60

Query: 698 LSIDELQSSLIVHE 739
           L+IDELQSSL+VHE
Sbjct: 61  LTIDELQSSLLVHE 74