BLASTX nr result

ID: Rehmannia28_contig00024103 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00024103
         (364 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012830970.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    87   1e-17
ref|XP_011092756.1| PREDICTED: pentatricopeptide repeat-containi...    69   2e-11
gb|EYU42638.1| hypothetical protein MIMGU_mgv1a023952mg [Erythra...    65   7e-10
emb|CDO97103.1| unnamed protein product [Coffea canephora]             58   1e-07
gb|EPS61672.1| hypothetical protein M569_13122 [Genlisea aurea]        56   9e-07
ref|XP_002306075.1| pentatricopeptide repeat-containing family p...    54   3e-06

>ref|XP_012830970.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g15980 [Erythranthe guttata]
          Length = 501

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 49/90 (54%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = -2

Query: 267 HTICSMKFLTDINAVSFNFRXXXXXXXXXXXXXXXXXXXXXXXXS-GDSVVSAAVSILKH 91
           HTICSMKFLTD+N VS NFR                        + G  V SAAVSILKH
Sbjct: 2   HTICSMKFLTDVNGVSINFRKSIVLFASLFPKPMPFSSSSTTPPTSGVDVASAAVSILKH 61

Query: 90  HRSKSRWSHLRSLITTAKYNRLAPSQFSEI 1
           HRSKSRWSHLRSLI   + NRL   QFS+I
Sbjct: 62  HRSKSRWSHLRSLIAAGEDNRLTADQFSQI 91


>ref|XP_011092756.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980
           [Sesamum indicum] gi|747090159|ref|XP_011092757.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980 [Sesamum indicum]
           gi|747090161|ref|XP_011092758.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g15980
           [Sesamum indicum] gi|747090163|ref|XP_011092759.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980 [Sesamum indicum]
           gi|747090165|ref|XP_011092760.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g15980
           [Sesamum indicum] gi|747090167|ref|XP_011092761.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980 [Sesamum indicum]
          Length = 463

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 132 GDSVVSAAVSILKHHRSKSRWSHLRSLITTAKYNRLAPSQFSEI 1
           GD++VSAAVSILKHHRSKSRWS+LRSL+T  K  RL  SQFSEI
Sbjct: 33  GDALVSAAVSILKHHRSKSRWSNLRSLLTATKDKRLTASQFSEI 76


>gb|EYU42638.1| hypothetical protein MIMGU_mgv1a023952mg [Erythranthe guttata]
          Length = 415

 Score = 64.7 bits (156), Expect = 7e-10
 Identities = 32/44 (72%), Positives = 34/44 (77%)
 Frame = -2

Query: 132 GDSVVSAAVSILKHHRSKSRWSHLRSLITTAKYNRLAPSQFSEI 1
           G  V SAAVSILKHHRSKSRWSHLRSLI   + NRL   QFS+I
Sbjct: 14  GVDVASAAVSILKHHRSKSRWSHLRSLIAAGEDNRLTADQFSQI 57


>emb|CDO97103.1| unnamed protein product [Coffea canephora]
          Length = 507

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = -2

Query: 126 SVVSAAVSILKHHRSKSRWSHLRSLITTAKYNRLAPSQFSEI 1
           ++VS A+SILKHHRSKSRWS+LRSL+T++    L PSQFS+I
Sbjct: 53  NLVSTAISILKHHRSKSRWSYLRSLLTSSN-EALTPSQFSQI 93


>gb|EPS61672.1| hypothetical protein M569_13122 [Genlisea aurea]
          Length = 464

 Score = 55.8 bits (133), Expect = 9e-07
 Identities = 27/44 (61%), Positives = 36/44 (81%)
 Frame = -2

Query: 132 GDSVVSAAVSILKHHRSKSRWSHLRSLITTAKYNRLAPSQFSEI 1
           G+S+VSAAVS+L+HHRSKSRWS+LRSL++      L PS FS++
Sbjct: 15  GESLVSAAVSVLQHHRSKSRWSNLRSLLSGPA--NLTPSHFSQV 56


>ref|XP_002306075.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222849039|gb|EEE86586.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 498

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = -2

Query: 123 VVSAAVSILKHHRSKSRWSHLRSLITTAKYNRLAPSQFSEI 1
           + +A +S+L HHRSKSRWSHLRSL+TT     LAP  FS I
Sbjct: 39  LTTAIISLLTHHRSKSRWSHLRSLLTTTTSTPLAPGHFSLI 79


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