BLASTX nr result

ID: Rehmannia28_contig00024089 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00024089
         (309 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073443.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...    74   2e-13
ref|XP_012841751.1| PREDICTED: ATP-dependent RNA helicase SUV3, ...    68   2e-11
emb|CDO99089.1| unnamed protein product [Coffea canephora]             62   3e-09
ref|XP_010326677.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...    61   6e-09
ref|XP_015088189.1| PREDICTED: ATP-dependent RNA helicase SUV3, ...    61   6e-09
ref|XP_006360763.1| PREDICTED: ATP-dependent RNA helicase SUV3, ...    61   6e-09
ref|XP_004247583.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...    61   6e-09
gb|EPS66047.1| hypothetical protein M569_08726, partial [Genlise...    57   2e-07
ref|XP_009800791.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...    55   4e-07
ref|XP_007034823.1| ATP-dependent RNA helicase, mitochondrial (S...    56   5e-07
ref|XP_007034819.1| ATP-dependent RNA and DNA helicase, putative...    56   5e-07
ref|XP_007034822.1| ATP-dependent RNA and DNA helicase, putative...    56   5e-07
gb|KVH97362.1| Helicase, C-terminal [Cynara cardunculus var. sco...    55   7e-07

>ref|XP_011073443.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial
           [Sesamum indicum]
          Length = 548

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 32/49 (65%), Positives = 36/49 (73%)
 Frame = +1

Query: 160 DNADISRSSWQFKFGTSYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYP 306
           DN      +W  K GTS+ V +CLRK+SSS G KKFDFTDLTRPHTWYP
Sbjct: 17  DNVGCYYYTWDSKLGTSWSVCRCLRKISSSVGGKKFDFTDLTRPHTWYP 65


>ref|XP_012841751.1| PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial
           [Erythranthe guttata] gi|604347417|gb|EYU45669.1|
           hypothetical protein MIMGU_mgv1a004052mg [Erythranthe
           guttata]
          Length = 547

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 196 KFGTSYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYP 306
           KFGTSYGVYQCLR  SS +G KK+DFTDLT PH WYP
Sbjct: 21  KFGTSYGVYQCLRNASSYSGPKKYDFTDLTCPHKWYP 57


>emb|CDO99089.1| unnamed protein product [Coffea canephora]
          Length = 627

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +1

Query: 208 SYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           S+G+  C R+LSSS  AKKFDFTDLTRPHTWYPN
Sbjct: 38  SFGICNCFRQLSSSGDAKKFDFTDLTRPHTWYPN 71


>ref|XP_010326677.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial
           isoform X2 [Solanum lycopersicum]
          Length = 536

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 208 SYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           S+G+  CLRK SSST A+K DFTDLTRPHTWYP+
Sbjct: 6   SFGICNCLRKFSSSTAARKVDFTDLTRPHTWYPH 39


>ref|XP_015088189.1| PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial [Solanum
           pennellii]
          Length = 569

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 208 SYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           S+G+  CLRK SSST A+K DFTDLTRPHTWYP+
Sbjct: 39  SFGICNCLRKFSSSTAARKVDFTDLTRPHTWYPH 72


>ref|XP_006360763.1| PREDICTED: ATP-dependent RNA helicase SUV3, mitochondrial isoform
           X1 [Solanum tuberosum]
          Length = 569

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 208 SYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           S+G+  CLRK SSST A+K DFTDLTRPHTWYP+
Sbjct: 39  SFGICNCLRKFSSSTAARKVDFTDLTRPHTWYPH 72


>ref|XP_004247583.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial
           isoform X1 [Solanum lycopersicum]
          Length = 569

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 208 SYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           S+G+  CLRK SSST A+K DFTDLTRPHTWYP+
Sbjct: 39  SFGICNCLRKFSSSTAARKVDFTDLTRPHTWYPH 72


>gb|EPS66047.1| hypothetical protein M569_08726, partial [Genlisea aurea]
          Length = 542

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 26/49 (53%), Positives = 32/49 (65%)
 Frame = +1

Query: 160 DNADISRSSWQFKFGTSYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYP 306
           DN  +   +   K  +S+G  QCLR+LSS + A K DFTDLT PHTWYP
Sbjct: 9   DNEVLYLPNLGLKLVSSFGASQCLRQLSSCSAANKVDFTDLTSPHTWYP 57


>ref|XP_009800791.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Nicotiana sylvestris]
          Length = 172

 Score = 54.7 bits (130), Expect = 4e-07
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = +1

Query: 187 WQFKFGTSYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           W      S+ +  CLR+ S+ST A+K DFTDLT PH+WYP+
Sbjct: 33  WNMGTEASFAICNCLRQFSNSTAARKVDFTDLTHPHSWYPH 73


>ref|XP_007034823.1| ATP-dependent RNA helicase, mitochondrial (SUV3) isoform 5
           [Theobroma cacao] gi|508713852|gb|EOY05749.1|
           ATP-dependent RNA helicase, mitochondrial (SUV3) isoform
           5 [Theobroma cacao]
          Length = 412

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 27/50 (54%), Positives = 30/50 (60%)
 Frame = +1

Query: 160 DNADISRSSWQFKFGTSYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           DN D  R   + KF T   +   +RK SS   A KFDFTDLT PHTWYPN
Sbjct: 22  DNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFTDLTCPHTWYPN 71


>ref|XP_007034819.1| ATP-dependent RNA and DNA helicase, putative isoform 1 [Theobroma
           cacao] gi|508713848|gb|EOY05745.1| ATP-dependent RNA and
           DNA helicase, putative isoform 1 [Theobroma cacao]
          Length = 570

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 27/50 (54%), Positives = 30/50 (60%)
 Frame = +1

Query: 160 DNADISRSSWQFKFGTSYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           DN D  R   + KF T   +   +RK SS   A KFDFTDLT PHTWYPN
Sbjct: 22  DNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFTDLTCPHTWYPN 71


>ref|XP_007034822.1| ATP-dependent RNA and DNA helicase, putative isoform 4 [Theobroma
           cacao] gi|508713851|gb|EOY05748.1| ATP-dependent RNA and
           DNA helicase, putative isoform 4 [Theobroma cacao]
          Length = 571

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 27/50 (54%), Positives = 30/50 (60%)
 Frame = +1

Query: 160 DNADISRSSWQFKFGTSYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYPN 309
           DN D  R   + KF T   +   +RK SS   A KFDFTDLT PHTWYPN
Sbjct: 22  DNGDSFRLRLESKFETFASIGVMIRKYSSGKSAAKFDFTDLTCPHTWYPN 71


>gb|KVH97362.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 565

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = +1

Query: 187 WQFKFGTSYGVYQCLRKLSSSTGAKKFDFTDLTRPHTWYP 306
           W    G S  ++   R+ SSSTGA K DFTDLTRPHTWYP
Sbjct: 42  WDLTCGASARIHVSSRQFSSSTGAVKMDFTDLTRPHTWYP 81


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