BLASTX nr result
ID: Rehmannia28_contig00024051
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00024051
(1542 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178... 275 2e-79
gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposo... 260 3e-76
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177... 268 1e-75
gb|KYP47805.1| Retrovirus-related Pol polyprotein from transposo... 256 3e-75
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo... 254 1e-74
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 265 1e-74
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo... 260 2e-74
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo... 258 4e-74
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo... 254 2e-73
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424... 262 2e-73
gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposo... 254 2e-73
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo... 259 2e-72
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo... 259 2e-72
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 257 4e-72
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo... 246 5e-72
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 257 2e-71
gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposo... 244 3e-70
gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposo... 235 4e-70
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo... 251 2e-69
gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposo... 247 2e-69
>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
Length = 877
Score = 275 bits (702), Expect = 2e-79
Identities = 125/207 (60%), Positives = 158/207 (76%), Gaps = 1/207 (0%)
Frame = +2
Query: 104 FILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSI 280
+ L + DD++R+TWI+PL +KS+ S F+ F M+E RIK Q DWGGEFRP S
Sbjct: 537 YYLSILDDYTRYTWIFPLTTKSKTLSAFIDFKNMIENCLNLRIKCLQTDWGGEFRPFVSY 596
Query: 281 LQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINR 460
L GI FRHPCPY H QN K ERKH+HIVETGLTLLAQA LP KFWW+AF AT+LINR
Sbjct: 597 LSEQGIQFRHPCPYIHHQNRKIERKHRHIVETGLTLLAQAHLPLKFWWNAFHTATYLINR 656
Query: 461 LPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTH 640
LP+ L+ +SP+++LF+K PDYT +K+FGC+C+PYLRPYN KLQFR+ +C+FL YS H
Sbjct: 657 LPTPILNNKSPFEKLFHKLPDYTMMKVFGCSCYPYLRPYNHHKLQFRSERCVFLGYSSLH 716
Query: 641 KGYKCLHPSGRLYIAKTVAFNETEFPY 721
KGY+CLH SGR+YI+ V F+E+ FP+
Sbjct: 717 KGYQCLHLSGRVYISNHVTFDESFFPF 743
>gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 600
Score = 260 bits (664), Expect = 3e-76
Identities = 131/219 (59%), Positives = 152/219 (69%), Gaps = 1/219 (0%)
Frame = +2
Query: 80 LERVTNIMFILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGG 256
LE M+ L D +R+ WIY LH KS V S FL F T+ E QFQT +K Q D GG
Sbjct: 201 LESSWGYMYFLTCVDACTRYMWIYLLHRKSDVFSHFLNFKTLAEKQFQTLLKSVQTDGGG 260
Query: 257 EFRPLQSILQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFL 436
EFRPL S LQ GI R CP+TH QNG ER+H H+VE GL +L ASLP KFW FL
Sbjct: 261 EFRPLTSFLQQHGIIHRLTCPHTHHQNGIVERRHIHVVELGLAMLHHASLPLKFWDHGFL 320
Query: 437 IATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCL 616
AT+LINRLPSS++ QSPY + +K PDY FLKIFGC+CFP LRPYN K+Q R+ +CL
Sbjct: 321 TATYLINRLPSSSIGHQSPYHLIHHKEPDYQFLKIFGCSCFPLLRPYNQHKIQPRSEECL 380
Query: 617 FL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 733
FL YSPTHKGYKCL SGR+YI+K V FNE+ FPY LF
Sbjct: 381 FLGYSPTHKGYKCLSKSGRIYISKDVVFNESRFPYQDLF 419
Score = 81.3 bits (199), Expect(2) = 4e-13
Identities = 38/81 (46%), Positives = 48/81 (59%)
Frame = +1
Query: 982 IAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSV 1161
+ P T + AL+ P W AM E AL NHTW L + KW+FRVK DGS+
Sbjct: 520 VVPKTVKTALADPHWLAAMQTEITALHNNHTWTLTTLPPGRKPIGCKWVFRVKENPDGSI 579
Query: 1162 DRLKARLVARGFQQNAGIDFF 1224
++ KARLVA+GF Q G+DFF
Sbjct: 580 NKYKARLVAKGFHQQPGLDFF 600
Score = 23.1 bits (48), Expect(2) = 4e-13
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 914 MVTRSKNGISKPK 952
M TRSKNGI +P+
Sbjct: 498 MTTRSKNGIVQPR 510
>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
Length = 1143
Score = 268 bits (684), Expect = 1e-75
Identities = 124/205 (60%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
DD +RFTWI+PL +K + +F F T +E QF IK Q DWGGEFR + L GI
Sbjct: 623 DDCTRFTWIFPLKTKDETLPVFKIFKTQIEKQFSRPIKCLQSDWGGEFRSFVNYLLAEGI 682
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
FRH CPYTH QNG ERKH+HI E GLTLLAQA++P KFWWD+F AT++INRLP+ L
Sbjct: 683 QFRHLCPYTHNQNGLVERKHRHITELGLTLLAQAAMPLKFWWDSFHTATYIINRLPTPVL 742
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
+SPY+ LF +PDY FL++FGC+CF +LR YN K QF TSKC+FL YSP HKGYKCL
Sbjct: 743 SIKSPYESLFQLSPDYKFLRVFGCSCFLFLREYNKHKFQFHTSKCVFLGYSPLHKGYKCL 802
Query: 659 HPSGRLYIAKTVAFNETEFPYPLLF 733
HPSGR YIA V F+E+ FPY LF
Sbjct: 803 HPSGRTYIASHVLFDESSFPYSSLF 827
>gb|KYP47805.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 555
Score = 256 bits (654), Expect = 3e-75
Identities = 121/205 (59%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
D ++RFTWIY + +K+Q IF QF MV+ QFQ IK Q +WGGE+RP + L ++GI
Sbjct: 244 DAYTRFTWIYLIKNKAQTIGIFKQFHNMVKNQFQLPIKALQTNWGGEYRPFTAYLNDVGI 303
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
R CP+TH QNG E KH+HIVE GLT+LA+A+LP +F AFL + +LIN+LPSS++
Sbjct: 304 QHRLICPHTHHQNGVVEHKHRHIVELGLTMLAKANLPMQFLDYAFLTSVYLINQLPSSSI 363
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
+ PYQ+LFNK PDY FLK+FGC+CFP+LRPYN SKLQ R+ +CLFL YS +HKGYKCL
Sbjct: 364 QNEVPYQKLFNKIPDYHFLKVFGCSCFPHLRPYNKSKLQLRSQECLFLGYSTSHKGYKCL 423
Query: 659 HPSGRLYIAKTVAFNETEFPYPLLF 733
+GRLYI+K V FNE +FPY LF
Sbjct: 424 AANGRLYISKDVIFNEVKFPYKTLF 448
>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 537
Score = 254 bits (649), Expect = 1e-74
Identities = 118/205 (57%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
D H+RF WI+ SK+ +F QF M++ QFQ IK Q DWGGEFR S L GI
Sbjct: 124 DAHTRFIWIFLFKSKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGI 183
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
R CP+TH QNG ERKH+HIVE GLT+LAQA LP +FW AFL + +LINRLPSS++
Sbjct: 184 QHRLICPHTHHQNGIVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSI 243
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
P+++LF++ PDY FL+IFGC+CFP+LRPYN +KLQ R+ +C+FL YS +HKGYKCL
Sbjct: 244 QHDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQECVFLGYSTSHKGYKCL 303
Query: 659 HPSGRLYIAKTVAFNETEFPYPLLF 733
P+GR++I+K V F ET FPYP LF
Sbjct: 304 APTGRIFISKDVIFCETRFPYPSLF 328
Score = 106 bits (265), Expect = 5e-21
Identities = 47/103 (45%), Positives = 71/103 (68%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
P + +QAL+ +W AM +EY AL+ N TW LV + + KW+FR+K DG+V++
Sbjct: 435 PKSTKQALANDTWLAAMKQEYNALLNNGTWTLVSLPPNKTAIGCKWVFRIKENSDGTVNK 494
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGW 1296
KARLVA+GF + G D+ +TF+P+VKP+TIR++ TLA++ W
Sbjct: 495 YKARLVAKGFHKQFGSDYNETFSPVVKPVTIRLILTLALTHHW 537
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1165
Score = 265 bits (677), Expect = 1e-74
Identities = 123/215 (57%), Positives = 155/215 (72%), Gaps = 1/215 (0%)
Frame = +2
Query: 80 LERVTNIMFILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGG 256
+ V+ + +L DD SRFTWIYPL KS V F+QF +VE QF RIK Q D GG
Sbjct: 436 ISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQCDGGG 495
Query: 257 EFRPLQSILQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFL 436
EF+ L +L GI R CPYT QNG+AERKH+H+VE+GLTLLAQA +P +WW+AF
Sbjct: 496 EFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFS 555
Query: 437 IATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCL 616
A FLINRLP+ + +SPYQQLF+K PDYT +K FGCAC+P L+PYN KLQF T+KC+
Sbjct: 556 TAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKLQFHTTKCV 615
Query: 617 FL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPY 721
FL YS +HKGYKCL+ +GR++I++ V FNE FP+
Sbjct: 616 FLGYSGSHKGYKCLNSTGRIFISRHVVFNEHHFPF 650
Score = 205 bits (521), Expect = 1e-53
Identities = 84/162 (51%), Positives = 124/162 (76%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
P T +AL P WK AM E+ ALM N TW LVP+ N++ KW+F+ K+K DG+++R
Sbjct: 767 PETTYEALENPEWKKAMIAEFKALMMNKTWTLVPYQGQKNIIDCKWVFKTKYKADGTIER 826
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 1347
KARLVA+GFQQ G+D+ +TF+P++K +T+RI+ ++AV W++ Q+D+NNAFL G+LK
Sbjct: 827 RKARLVAKGFQQTLGLDYDETFSPVIKAITVRIILSIAVHFNWEIRQMDINNAFLNGELK 886
Query: 1348 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGHKQAPKIWYDKLR 1473
E+V+M QPEG++D ++P H+CKL +++YG KQAP+ WYD+LR
Sbjct: 887 ETVFMRQPEGFLDKSRPQHICKLTKAIYGLKQAPRSWYDRLR 928
>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 839
Score = 260 bits (665), Expect = 2e-74
Identities = 123/205 (60%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
D H+RFTWI+ L SK+ +F QF MV QFQ IK Q DWGGEFR S L GI
Sbjct: 235 DAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDWGGEFRSFTSYLAQHGI 294
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
H R CP+TH QNG ERKH+HIVE GLTLLAQA LP FW AFL + +LINRLPSS++
Sbjct: 295 HHRIICPHTHHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSI 354
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
P+++LF+ PDY FL++FGC+CFP+LRPYN +KLQFR+ +C+FL YS +HKGYKCL
Sbjct: 355 QQDVPFRKLFHHLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQECVFLGYSTSHKGYKCL 414
Query: 659 HPSGRLYIAKTVAFNETEFPYPLLF 733
PSGR++I+K V F E FPYP LF
Sbjct: 415 APSGRVFISKDVIFCENRFPYPTLF 439
Score = 182 bits (463), Expect = 3e-46
Identities = 84/163 (51%), Positives = 116/163 (71%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
P +QAL+ +W AM +EY ALM N TW LVP H + KW+FR+K DG+V +
Sbjct: 538 PKNTKQALASDTWLAAMKQEYNALMANGTWTLVPLPSHRTAIGCKWVFRIKENPDGTVHK 597
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 1347
KARLVA+GF Q G D+ +TF+P+VKP+TIR++ TLA++ W + Q+DVNNAFL G+L+
Sbjct: 598 HKARLVAKGFHQQFGFDYTETFSPVVKPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLE 657
Query: 1348 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGHKQAPKIWYDKLRA 1476
E VYM+QP G+ K + VCKL +++YG KQAP+ W+DKL+A
Sbjct: 658 EEVYMSQPPGFESSDK-SLVCKLHKAIYGLKQAPRAWFDKLKA 699
>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 785
Score = 258 bits (660), Expect = 4e-74
Identities = 120/205 (58%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
D H+RFTWI+ L K+ +F QF M++ QFQ IK Q DWGGEFR S L GI
Sbjct: 488 DAHTRFTWIFLLKRKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGI 547
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
R CP+TH QNG ERKH+HIVE GLT+LAQA LP +FW AFL + +LINRLPSS++
Sbjct: 548 QHRLICPHTHHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSI 607
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
P+++LF++ PDY FL+IFGC+CFP+LRPYN +KLQFR+ +C+FL YS +HKGYKCL
Sbjct: 608 QNDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQECVFLGYSTSHKGYKCL 667
Query: 659 HPSGRLYIAKTVAFNETEFPYPLLF 733
P+GR++I+K V F ET FPYP LF
Sbjct: 668 APTGRIFISKDVVFCETRFPYPSLF 692
>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 661
Score = 254 bits (649), Expect = 2e-73
Identities = 120/211 (56%), Positives = 151/211 (71%), Gaps = 1/211 (0%)
Frame = +2
Query: 104 FILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSI 280
+ + + D H+RFTWI+ L SK+ +F QF MV+ QFQ IK Q DWGGEFR S
Sbjct: 194 YYVTLVDAHTRFTWIFLLKSKAHTLDVFKQFHAMVQNQFQLPIKAIQTDWGGEFRSFTSY 253
Query: 281 LQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINR 460
L GIH R CP+TH QNG E KH+HIVE GLTLLAQA L FW AFL + +LINR
Sbjct: 254 LAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLAQAQLSMSFWDYAFLTSVYLINR 313
Query: 461 LPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTH 640
LPSS++ P+Q+LF++ PDY FL++FGC+CFP+L PYN +KLQFR+ +C+FL YS +H
Sbjct: 314 LPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRSQECVFLGYSTSH 373
Query: 641 KGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 733
KGYKCL PSGR++I+K V F E FPYP +F
Sbjct: 374 KGYKCLAPSGRIFISKDVIFCENHFPYPSMF 404
Score = 141 bits (355), Expect = 2e-32
Identities = 65/137 (47%), Positives = 91/137 (66%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
P + +QAL+ +W AM ++Y ALM N TW LV H + KW+FR+K DG+V +
Sbjct: 503 PKSTKQALASDTWLAAMKQKYDALMANGTWTLVSLPSHRTTIGCKWVFRIKENPDGTVHK 562
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 1347
KARLVA+GF Q G D+ +TF+ +VKP+TIR++ TL ++ W + Q+DVNNAFL G+L+
Sbjct: 563 HKARLVAKGFHQQFGFDYTETFSLVVKPVTIRLIHTLVLTHHWSIQQLDVNNAFLNGNLE 622
Query: 1348 ESVYMAQPEGYVDPTKP 1398
E YM+QP G T P
Sbjct: 623 EEFYMSQPPGLSHLTSP 639
>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
Length = 1270
Score = 262 bits (670), Expect = 2e-73
Identities = 118/201 (58%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
DD+SRFTWIYP+ KS+ IF F MVE F T++K Q DWGGE+R LQ +GI
Sbjct: 718 DDYSRFTWIYPMTVKSEALFIFKHFHVMVERLFDTKLKVVQSDWGGEYRCFLPYLQQVGI 777
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
FRH CPY HQQNG+AERKH+HIVE GL+ LAQA +P +WW+AF A ++INRLP++ L
Sbjct: 778 KFRHSCPYMHQQNGRAERKHRHIVEVGLSFLAQAHMPLLYWWEAFTSAVYVINRLPTAIL 837
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
F SP++ LF K PDY FLK+FG ACFP+LRP+ K QF T KC+F+ YS HKGYKC+
Sbjct: 838 DFHSPFELLFKKVPDYDFLKVFGSACFPFLRPFQNHKFQFHTEKCVFIGYSDDHKGYKCM 897
Query: 659 HPSGRLYIAKTVAFNETEFPY 721
SG++YIA++V FNE EFP+
Sbjct: 898 SSSGKIYIARSVNFNEKEFPF 918
Score = 212 bits (540), Expect = 5e-56
Identities = 93/166 (56%), Positives = 126/166 (75%)
Frame = +1
Query: 976 IPIAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDG 1155
+ + P + AL+ P WK AMD+EYGAL+KN+TW LVP+ MN++ KWIFRVK DG
Sbjct: 1043 VDVEPVSVTDALTNPRWKAAMDQEYGALVKNNTWSLVPYHSGMNLIGHKWIFRVKRNADG 1102
Query: 1156 SVDRLKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLK 1335
+V R KARLVA+GF Q G DF +TF+P++KP TIR++ +LA+S W+V Q+D NNAFL
Sbjct: 1103 TVQRYKARLVAKGFHQQPGFDFNETFSPVIKPTTIRLVLSLAISHNWEVRQLDFNNAFLN 1162
Query: 1336 GDLKESVYMAQPEGYVDPTKPTHVCKLVRSLYGHKQAPKIWYDKLR 1473
GDL+E+VY+ QP+GY D PTHVC+L ++LYG KQAP+ W++KL+
Sbjct: 1163 GDLQETVYLTQPQGYEDKQFPTHVCQLHKALYGLKQAPRAWFEKLK 1208
>gb|KYP34572.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 682
Score = 254 bits (649), Expect = 2e-73
Identities = 120/211 (56%), Positives = 151/211 (71%), Gaps = 1/211 (0%)
Frame = +2
Query: 104 FILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSI 280
+ + + D H+RFTWI+ L SK+ +F QF MV+ QFQ IK Q DWGGEFR S
Sbjct: 215 YYVTLVDAHTRFTWIFLLKSKAHTLDVFKQFHAMVQNQFQLPIKAIQTDWGGEFRSFTSY 274
Query: 281 LQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINR 460
L GIH R CP+TH QNG E KH+HIVE GLTLLAQA L FW AFL + +LINR
Sbjct: 275 LAQHGIHHRIICPHTHHQNGVVECKHRHIVELGLTLLAQAQLSMSFWDYAFLTSVYLINR 334
Query: 461 LPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTH 640
LPSS++ P+Q+LF++ PDY FL++FGC+CFP+L PYN +KLQFR+ +C+FL YS +H
Sbjct: 335 LPSSSIQQDVPFQKLFHQLPDYNFLRVFGCSCFPHLWPYNKTKLQFRSQECVFLGYSTSH 394
Query: 641 KGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 733
KGYKCL PSGR++I+K V F E FPYP +F
Sbjct: 395 KGYKCLAPSGRIFISKDVIFCENHFPYPSMF 425
Score = 141 bits (355), Expect = 2e-32
Identities = 65/137 (47%), Positives = 91/137 (66%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
P + +QAL+ +W AM ++Y ALM N TW LV H + KW+FR+K DG+V +
Sbjct: 524 PKSTKQALASDTWLAAMKQKYDALMANGTWTLVSLPSHRTTIGCKWVFRIKENPDGTVHK 583
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 1347
KARLVA+GF Q G D+ +TF+ +VKP+TIR++ TL ++ W + Q+DVNNAFL G+L+
Sbjct: 584 HKARLVAKGFHQQFGFDYTETFSLVVKPVTIRLIHTLVLTHHWSIQQLDVNNAFLNGNLE 643
Query: 1348 ESVYMAQPEGYVDPTKP 1398
E YM+QP G T P
Sbjct: 644 EEFYMSQPPGLSHLTSP 660
>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1279
Score = 259 bits (663), Expect = 2e-72
Identities = 125/212 (58%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Frame = +2
Query: 101 MFILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQS 277
++ + D S++TWIYPL SK++ S+F QF M E QF T+IK Q DWGGE+R S
Sbjct: 440 LYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTS 499
Query: 278 ILQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLIN 457
L GI R CP+TH QNG ERKH+HIVE GLTLL ASLP KFW AF A +LIN
Sbjct: 500 FLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLIN 559
Query: 458 RLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPT 637
RLPS+AL+F P+ LFNK+PDY FL+ FGCACFP+LRPY + KL FR+ +C+FL YS +
Sbjct: 560 RLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNS 619
Query: 638 HKGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 733
HKGYKCL SGR+YI+K V FNE FPY LF
Sbjct: 620 HKGYKCLSSSGRIYISKDVIFNEHRFPYTDLF 651
Score = 191 bits (484), Expect = 1e-48
Identities = 89/162 (54%), Positives = 119/162 (73%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
P T +QAL+ P+W +AM +EY ALM NHTWDLV V KW+FRVK DGS+D+
Sbjct: 765 PKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDK 824
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 1347
LKARLVA+GF Q G DF +TF+P++KP+TIRI+ TLA++ W + Q+DVNNAFL G L+
Sbjct: 825 LKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLE 884
Query: 1348 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGHKQAPKIWYDKLR 1473
E++YM QP G+ K + VCKL ++LYG KQAP+ W++KL+
Sbjct: 885 ETIYMVQPPGFEAGDK-SLVCKLNKALYGLKQAPRQWFNKLK 925
>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1358
Score = 259 bits (663), Expect = 2e-72
Identities = 125/212 (58%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Frame = +2
Query: 101 MFILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQS 277
++ + D S++TWIYPL SK++ S+F QF M E QF T+IK Q DWGGE+R S
Sbjct: 519 LYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTS 578
Query: 278 ILQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLIN 457
L GI R CP+TH QNG ERKH+HIVE GLTLL ASLP KFW AF A +LIN
Sbjct: 579 FLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLIN 638
Query: 458 RLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPT 637
RLPS+AL+F P+ LFNK+PDY FL+ FGCACFP+LRPY + KL FR+ +C+FL YS +
Sbjct: 639 RLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNS 698
Query: 638 HKGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 733
HKGYKCL SGR+YI+K V FNE FPY LF
Sbjct: 699 HKGYKCLSSSGRIYISKDVIFNEHRFPYTDLF 730
Score = 191 bits (484), Expect = 1e-48
Identities = 89/162 (54%), Positives = 119/162 (73%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
P T +QAL+ P+W +AM +EY ALM NHTWDLV V KW+FRVK DGS+D+
Sbjct: 844 PKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWVFRVKENADGSIDK 903
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 1347
LKARLVA+GF Q G DF +TF+P++KP+TIRI+ TLA++ W + Q+DVNNAFL G L+
Sbjct: 904 LKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLE 963
Query: 1348 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGHKQAPKIWYDKLR 1473
E++YM QP G+ K + VCKL ++LYG KQAP+ W++KL+
Sbjct: 964 ETIYMVQPPGFEAGDK-SLVCKLNKALYGLKQAPRQWFNKLK 1004
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1073
Score = 257 bits (657), Expect = 4e-72
Identities = 122/205 (59%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
D H+RFTWIY L SK+Q ++F QF MV+ Q+ IK Q DWGGE+R + L +GI
Sbjct: 249 DAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGI 308
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
R CP+TH QNG AERKH+HIVE GLTL+AQA LP +FW +FL A +LINRLPSS++
Sbjct: 309 QHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSI 368
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
PY +LF++ PDY L+IFGC+CFP+LRPYN KLQFR+ +C+FL YS +HKGYKCL
Sbjct: 369 QNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCL 428
Query: 659 HPSGRLYIAKTVAFNETEFPYPLLF 733
GRLYI+K V FNET+FPY LF
Sbjct: 429 AADGRLYISKDVVFNETKFPYKDLF 453
Score = 186 bits (471), Expect = 5e-47
Identities = 83/165 (50%), Positives = 117/165 (70%)
Frame = +1
Query: 982 IAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSV 1161
+ P T +QALS P+W AM EY AL+ N+TW LVP H + KW+FRVK +GSV
Sbjct: 559 VEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSV 618
Query: 1162 DRLKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGD 1341
+ KARLVA+GF Q G D+ +TF+P++KP+T+R++ TLA++ W + Q+DVNNAFL G
Sbjct: 619 QKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGT 678
Query: 1342 LKESVYMAQPEGYVDPTKPTHVCKLVRSLYGHKQAPKIWYDKLRA 1476
L+E VYM QP G+ + + VCKL +++YG KQAP+ W+DKL++
Sbjct: 679 LEEEVYMQQPPGF-EASDKNLVCKLHKAIYGLKQAPRAWFDKLKS 722
>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 488
Score = 246 bits (627), Expect = 5e-72
Identities = 123/219 (56%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Frame = +2
Query: 80 LERVTNIMFILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGG 256
LE ++ L D +++ WIY L KS V S F F + E QFQT +K Q D GG
Sbjct: 70 LESSCGYLYFLTCVDACTKYVWIYLLRRKSDVSSNFQNFKALAEKQFQTPLKFVQTDGGG 129
Query: 257 EFRPLQSILQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFL 436
EFR L Q GI R CPYTH QNG ER+H+HIVE GL +L ++LP FW AFL
Sbjct: 130 EFRTLIPFFQQEGILHRLTCPYTHHQNGTVERRHRHIVELGLAMLHHSALPLNFWDHAFL 189
Query: 437 IATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCL 616
AT+LINRLPSS++ FQSPY+ + NK PDY FLKIFGC+CFP LRPYN K+Q R+ +C+
Sbjct: 190 TATYLINRLPSSSVGFQSPYKLIHNKDPDYAFLKIFGCSCFPLLRPYNQHKIQPRSEECV 249
Query: 617 FL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 733
FL YSP+HKGYKCL SGR+YI+K V FNE FPY LF
Sbjct: 250 FLGYSPSHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLF 288
Score = 72.0 bits (175), Expect(2) = 9e-11
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +1
Query: 982 IAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSV 1161
+ P T + AL+ P W +AM E AL NHTW LV + +W+F +K DGS+
Sbjct: 389 VEPKTVKSALTDPHWLSAMQAELTALHANHTWTLVELPSGRKPIGCRWVFHLKENPDGSI 448
Query: 1162 DRLKARLVARGFQQNAGI 1215
++ KARLVA+GF N G+
Sbjct: 449 NKYKARLVAKGFISNLGL 466
Score = 24.3 bits (51), Expect(2) = 9e-11
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 914 MVTRSKNGISKPK 952
M+TRSKNGI +P+
Sbjct: 367 MITRSKNGIIQPR 379
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 257 bits (657), Expect = 2e-71
Identities = 122/205 (59%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
D H+RFTWIY L SK+Q ++F QF MV+ Q+ IK Q DWGGE+R + L +GI
Sbjct: 584 DAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGI 643
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
R CP+TH QNG AERKH+HIVE GLTL+AQA LP +FW +FL A +LINRLPSS++
Sbjct: 644 QHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSI 703
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
PY +LF++ PDY L+IFGC+CFP+LRPYN KLQFR+ +C+FL YS +HKGYKCL
Sbjct: 704 QNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCL 763
Query: 659 HPSGRLYIAKTVAFNETEFPYPLLF 733
GRLYI+K V FNET+FPY LF
Sbjct: 764 AADGRLYISKDVVFNETKFPYKDLF 788
Score = 186 bits (471), Expect = 6e-47
Identities = 83/165 (50%), Positives = 117/165 (70%)
Frame = +1
Query: 982 IAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSV 1161
+ P T +QALS P+W AM EY AL+ N+TW LVP H + KW+FRVK +GSV
Sbjct: 894 VEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSV 953
Query: 1162 DRLKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGD 1341
+ KARLVA+GF Q G D+ +TF+P++KP+T+R++ TLA++ W + Q+DVNNAFL G
Sbjct: 954 QKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGT 1013
Query: 1342 LKESVYMAQPEGYVDPTKPTHVCKLVRSLYGHKQAPKIWYDKLRA 1476
L+E VYM QP G+ + + VCKL +++YG KQAP+ W+DKL++
Sbjct: 1014 LEEEVYMQQPPGF-EASDKNLVCKLHKAIYGLKQAPRAWFDKLKS 1057
>gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 623
Score = 244 bits (624), Expect = 3e-70
Identities = 117/201 (58%), Positives = 146/201 (72%), Gaps = 1/201 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
D +SRFTWIY L +KS+ +IF QF M + QF +IK FQ DWGGEFRP IL +LGI
Sbjct: 188 DAYSRFTWIYFLKNKSEALTIFKQFQAMAKLQFNHKIKSFQSDWGGEFRPFTQILTSLGI 247
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
R CP+TH QNG ERKH+HI+E GLTLL+QA LP K+W F +LINRLPS +
Sbjct: 248 THRLICPHTHHQNGVVERKHRHIIEMGLTLLSQAFLPMKYWDHVFHTTVYLINRLPSLSH 307
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
+ PYQ L++K DYTF+K+FGCAC+P L PYNT+KL FR+++C+FL YS +HKGYKCL
Sbjct: 308 NKIVPYQVLYSKDLDYTFIKVFGCACYPLLTPYNTNKLHFRSTECVFLGYSSSHKGYKCL 367
Query: 659 HPSGRLYIAKTVAFNETEFPY 721
+G L+I+K V FNE FPY
Sbjct: 368 DTNGLLFISKDVIFNEQRFPY 388
Score = 163 bits (412), Expect = 4e-40
Identities = 75/151 (49%), Positives = 107/151 (70%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
PT+ +QALS PSWK M EY AL+KN TW LVP + ++ KW++ +K DG++++
Sbjct: 469 PTSLKQALSSPSWKTVMSLEYDALIKNQTWKLVPLPSNRTLIGCKWVYCIKENHDGTINK 528
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 1347
KARLVA+GF Q G D+ +TF+P++KP+TIR++ TL V+ W + QVD+NNAFL G L+
Sbjct: 529 YKARLVAKGFHQKFGSDYSETFSPVIKPITIRVILTLVVTYHWPIKQVDINNAFLNGFLE 588
Query: 1348 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGHK 1440
E VYM QP G+ + + T VCKL +++YG K
Sbjct: 589 EDVYMMQPPGF-EVSDKTLVCKLNKAIYGLK 618
>gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 302
Score = 235 bits (599), Expect = 4e-70
Identities = 118/220 (53%), Positives = 149/220 (67%), Gaps = 2/220 (0%)
Frame = +2
Query: 80 LERVTNIMFILLMNDDHSRFTWIYPLHSKSQVQSIFLQFTM-VETQFQTRIKRFQPDWGG 256
++ N + L + + FTWIY L +K ++F QF M VE QF T +K Q DWGG
Sbjct: 81 IQSSNNYKYYLSFVNAYPCFTWIYLLQNKFDTLTVFKQFKMMVELQFNTSLKSLQTDWGG 140
Query: 257 EFR-PLQSILQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAF 433
EF PL L++LG++ R CP+T QNG ERKH+HIVE GLTL + ASLP KFW F
Sbjct: 141 EFIIPLPKYLKDLGVNHRVICPHTPHQNGVIERKHRHIVELGLTL-SHASLPLKFWDSTF 199
Query: 434 LIATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKC 613
A +LINRLP+++L + PY LF ++PDYTFLK FGCACFP LRPYN KL FR+ +C
Sbjct: 200 CTAVYLINRLPTASLKYVVPYTILFKQSPDYTFLKTFGCACFPLLRPYNKHKLDFRSHEC 259
Query: 614 LFL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 733
+FL YS +HKGYKCL P G+++I+K V FNE FPY LF
Sbjct: 260 VFLGYSTSHKGYKCLSPIGKIFISKDVVFNEYRFPYHELF 299
>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1268
Score = 251 bits (641), Expect = 2e-69
Identities = 121/205 (59%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Frame = +2
Query: 122 DDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGGEFRPLQSILQNLGI 298
D S+FTWIYPL SKS S+F QF MVE Q T+IK Q DWGGE+R + L GI
Sbjct: 503 DAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLATHGI 562
Query: 299 HFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFLIATFLINRLPSSAL 478
R CP+TH QNG ERKH+HIV+ G+TLL ASLP FW AF A +LINRLP+++L
Sbjct: 563 THRLICPHTHHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYAFSTAVYLINRLPTASL 622
Query: 479 HFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCLFL*YSPTHKGYKCL 658
+F P+ LF + PDY FLK FGCACFP+LRPY T KL FR+ +C+FL YS +HKGYKCL
Sbjct: 623 NFDIPFTVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCL 682
Query: 659 HPSGRLYIAKTVAFNETEFPYPLLF 733
SG++YI+K V FNET FPY LF
Sbjct: 683 SASGKIYISKDVIFNETRFPYLDLF 707
Score = 189 bits (479), Expect = 5e-48
Identities = 88/162 (54%), Positives = 119/162 (73%)
Frame = +1
Query: 988 PTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSVDR 1167
P +QALS P W +AM +EY AL++NHTWDLVP + V KW+FRVK DGS+++
Sbjct: 815 PKNVKQALSDPDWFSAMKQEYSALLQNHTWDLVPLPSNRQAVGCKWVFRVKENADGSINK 874
Query: 1168 LKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVSRGWKVHQVDVNNAFLKGDLK 1347
KARLVA+GF Q G DF +TF+P++KP+TIRI+ TLA++ W + Q+DVNNAFL G L+
Sbjct: 875 FKARLVAKGFHQVHGFDFHETFSPVIKPITIRIIITLALTYNWHLFQLDVNNAFLNGILE 934
Query: 1348 ESVYMAQPEGYVDPTKPTHVCKLVRSLYGHKQAPKIWYDKLR 1473
E+VYM QP G+ K + VCKL ++LYG KQAP+ W+D+L+
Sbjct: 935 ETVYMVQPPGFEVEDK-SLVCKLNKALYGVKQAPRQWFDRLK 975
>gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 872
Score = 247 bits (631), Expect = 2e-69
Identities = 123/219 (56%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Frame = +2
Query: 80 LERVTNIMFILLMNDDHSRFTWIYPLHSKSQVQSIFLQF-TMVETQFQTRIKRFQPDWGG 256
LE ++ L D +++ WIY L KS V S F F + E QFQT +K Q D GG
Sbjct: 201 LESSCGYLYFLTCVDACTKYMWIYLLRRKSDVYSNFQNFKALAEKQFQTPLKSVQTDGGG 260
Query: 257 EFRPLQSILQNLGIHFRHPCPYTHQQNGKAERKHQHIVETGLTLLAQASLPQKFWWDAFL 436
EFR L LQ GI R CPY H QNG ER+H+HI+E GL +L ++LP KFW AFL
Sbjct: 261 EFRTLIPFLQQEGILHRLTCPYMHHQNGTVERRHRHIIELGLAMLHHSALPLKFWDHAFL 320
Query: 437 IATFLINRLPSSALHFQSPYQQLFNKAPDYTFLKIFGCACFPYLRPYNTSKLQFRTSKCL 616
AT+LINRLPSS++ FQSPY+ + NK PDY FLK+FGC+CFP LRPYN K+Q R+ +CL
Sbjct: 321 TATYLINRLPSSSVGFQSPYKLIHNKDPDYAFLKVFGCSCFPLLRPYNQHKIQPRSEECL 380
Query: 617 FL*YSPTHKGYKCLHPSGRLYIAKTVAFNETEFPYPLLF 733
FL YSP+HKGYKCL SGR+YI+K V FNE FPY LF
Sbjct: 381 FLGYSPSHKGYKCLSRSGRIYISKDVIFNEGRFPYNDLF 419
Score = 103 bits (256), Expect(2) = 5e-20
Identities = 48/102 (47%), Positives = 67/102 (65%)
Frame = +1
Query: 982 IAPTTAQQALSIPSWKNAMDEEYGALMKNHTWDLVPFSEHMNVVTSKWIFRVKFKVDGSV 1161
+ P T + AL+ P W AM E AL N TW LV + +W+FR+K DGS+
Sbjct: 520 VEPKTVKSALTDPHWLAAMQAEITALHANRTWTLVELPSGRKPIGCRWVFRLKENPDGSI 579
Query: 1162 DRLKARLVARGFQQNAGIDFFDTFNPIVKPLTIRIMFTLAVS 1287
++ KARLVA+GF Q G+DF +TF+P+VKP+TIRI+ +LAV+
Sbjct: 580 NKYKARLVAKGFHQQPGVDFSETFSPVVKPVTIRIVLSLAVT 621
Score = 24.3 bits (51), Expect(2) = 5e-20
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 914 MVTRSKNGISKPK 952
M+TRSKNGI +P+
Sbjct: 498 MITRSKNGIIQPR 510