BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00024050
         (2815 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   459   e-139
ref|XP_004513130.2| PREDICTED: uncharacterized protein LOC101488...   271   e-110
ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178...   353   e-104
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   355   e-102
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]   283   2e-98
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424...   342   2e-97
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   341   7e-97
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]   345   9e-97
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177...   336   9e-96
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   337   1e-94
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   336   2e-94
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...   316   5e-94
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   323   7e-94
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   329   1e-93
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   332   1e-93
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   332   2e-93
gb|KYP40244.1| Retrovirus-related Pol polyprotein from transposo...   319   6e-93
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   320   2e-92
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   329   4e-92
gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposo...   311   1e-90

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  459 bits (1180), Expect = e-139
 Identities = 244/549 (44%), Positives = 321/549 (58%), Gaps = 4/549 (0%)
 Frame = +3

Query: 1179 DKTTNQILLKGALKGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVS--TSSLDVWHQ 1352
            D +T  +L+ G LKGGLY  D + L  P+             K+  V +  TS   +WH 
Sbjct: 450  DPSTRTVLMHGQLKGGLYVFDNTQLKLPLHNSSCFASTALPSKEPTVPASPTSPFTLWHN 509

Query: 1353 RLGHPCINTFASVMKHLHIPFSCNKLS--FCEACKVGKLHSISFPSIQSKSVAPFDLIYS 1526
            RLGHP  +  + V+   ++P   NK+    C  C +GK+H  SF    S    P +LI++
Sbjct: 510  RLGHPSSHIVSLVLNKCNLPH-LNKIPSLICSXCCMGKIHKSSFLHSTSSYTKPLELIHT 568

Query: 1527 DVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKA 1706
            D+WGPA+TPS  G++YY+HF+D ++RFTWI+ L  K + +   L+F S VE Q   KIKA
Sbjct: 569  DLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKA 628

Query: 1707 FQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLR 1886
             Q DW GEYR  +    S+GI  R  CP+TH QNG+ ERKH+HIV+ G+ LL+ A LP +
Sbjct: 629  VQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFK 688

Query: 1887 FWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQ 2066
            +W +AF TS YLIN LPTPVL N SP + LF++ P YS LK FGC C+P LRP+N+HKLQ
Sbjct: 689  YWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQ 748

Query: 2067 FRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQLCXXXXXXXXXXXLVF 2246
            FRS  C FLGYS  HKGYKCL P+G I I+R V F+E  FP+ QL               
Sbjct: 749  FRSIPCTFLGYSLNHKGYKCLSPNGNILISRDVIFDEXAFPFAQL-QSQKQXTSSFSSSX 807

Query: 2247 NSLPSIQALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIHPNHSMVTR 2426
             SLP   +L                                            +H M+TR
Sbjct: 808  TSLPCQTSLPLMVLPSSTSCSTSSPTNPSIFPATSNHNVASQXPPSSAPPFPSHH-MITR 866

Query: 2427 SKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTWDLVPPSA 2606
            SK GI+KPKA+++S++       P+SV +AL    WK AM  E+ AL+ N+TWDLVPP  
Sbjct: 867  SKXGIFKPKAYLISTT-------PTSVPEALQLSHWKQAMTDEYLALLRNNTWDLVPPPT 919

Query: 2607 DMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTIRIMFSL 2786
            D  LI  KWVFKVK   DG++ + KARLVA+GF QI G D+ ETFSPVVKP TIRI+ ++
Sbjct: 920  DRKLIGCKWVFKVKENXDGTINKYKARLVAKGFHQIAGFDFNETFSPVVKPTTIRIVLTI 979

Query: 2787 VVTRGWSIQ 2813
             +   W ++
Sbjct: 980  ALNLQWKVR 988



 Score =  186 bits (473), Expect = 9e-45
 Identities = 109/370 (29%), Positives = 172/370 (46%), Gaps = 27/370 (7%)
 Frame = +2

Query: 152  ITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAPSQFLQGTSSSAPTINPEYQVWIR 331
            ++ +LD  N+   R Q+L T+R H    FL  TS  PS+FL     +   +NP++Q W +
Sbjct: 19   VSSKLDNHNFLVXRKQILTTLRGHKLQHFLSETSVLPSEFLSSDDETQNHVNPKFQDWEQ 78

Query: 332  RDSYLFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKKGD 511
            +   + S LL+SI++++L  +  C  SAQ+W  LE  F +  +A++   +  L  TKKGD
Sbjct: 79   QXQLIMSXLLASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQFKTQLHNTKKGD 138

Query: 512  LSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQEV 691
            LS+ DY+LK+R + D L     +IS  D I  I  GL  ++E+ ++++ +R D  T++E+
Sbjct: 139  LSISDYLLKIRNVVDLLALVGHKISVKDHIBAIFEGLPQDYETFIISVNSRLDPYTVEEI 198

Query: 692  QFSLQSHEMRIXXXXXXXXXXXXXV------------HVAQRRFNNSENISP-------- 811
            +  L + E RI             +            H   R    + N  P        
Sbjct: 199  EALLLAQESRIEKNIKIADFSTPSLAHLITTNRNGSPHFNYRASTRNSNFRPPTHSGNGM 258

Query: 812  -------XXXXXXXXXXXXXXXXXXPACQICGKTNHLASKCFKRFDVSFVGLDAPSQFNP 970
                                     P CQ+CG+  H+  +C+ RFD SF G        P
Sbjct: 259  QHFRGNFTQQGRGRHGRGSWKGNNKPQCQLCGRIGHVVMQCYYRFDQSFTGPSQLQGNRP 318

Query: 971  QAHLSEVSQYSPSLPQAMTASLPQAVNVTSYPATDNSWYVDSGASAHVTSELGNLSLKSP 1150
            Q +++ + Q    L +      P     T+    DN+WY DSGA+ H+T  L NL  KS 
Sbjct: 319  QGNMAHLHQ---QLSEXFFPGTPSVKPTTAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQ 375

Query: 1151 YHGSDKLTVG 1180
            +  SD++ VG
Sbjct: 376  FPSSDEVFVG 385


>ref|XP_004513130.2| PREDICTED: uncharacterized protein LOC101488260, partial [Cicer
            arietinum]
          Length = 704

 Score =  271 bits (692), Expect(2) = e-110
 Identities = 141/338 (41%), Positives = 186/338 (55%), Gaps = 1/338 (0%)
 Frame = +3

Query: 1182 KTTNQILLKGALKGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRLG 1361
            ++    LLKG +K GLYQL  ++                   + + +  S  + WH++LG
Sbjct: 334  ESNGNALLKGKVKDGLYQLSSANSQV---------------NKDSCIYMSVKENWHRKLG 378

Query: 1362 HPCINTFASVMKHLHIPFSCNK-LSFCEACKVGKLHSISFPSIQSKSVAPFDLIYSDVWG 1538
            HP       V+K+ ++  S N     CEAC+ GKLH + F S  S +  P DLI+S VWG
Sbjct: 379  HPNNKVLEKVLKNCNVKTSSNDHFLLCEACQFGKLHLLPFTSSYSHAKEPLDLIHSGVWG 438

Query: 1539 PAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKAFQCD 1718
            PA   S   +KYYVHF+D+F+RFTWIFPL  K +       F +MVE QFS KIK  QCD
Sbjct: 439  PAPILSPSNFKYYVHFIDDFSRFTWIFPLKQKPETVHAFTQFKNMVENQFSKKIKILQCD 498

Query: 1719 WRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLRFWWD 1898
              GEY+ +      SGI+FR  CP+T  QNG  ERKH+H+ +LGLTLL+           
Sbjct: 499  GGGEYKPVQKIAIESGIQFRMSCPYTSQQNGRAERKHRHVAELGLTLLAQE--------- 549

Query: 1899 AFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQFRSS 2078
                                          PDY  LK FGCAC+P L+PYN HKLQF ++
Sbjct: 550  ------------------------------PDYDALKPFGCACYPCLKPYNQHKLQFHTT 579

Query: 2079 KCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPY 2192
            +C+FLGYS+ HKGYKCL+  GRI+++R V FNE  FP+
Sbjct: 580  RCVFLGYSNSHKGYKCLNSHGRIFVSRHVVFNENHFPF 617



 Score =  159 bits (403), Expect(2) = e-110
 Identities = 97/341 (28%), Positives = 162/341 (47%), Gaps = 2/341 (0%)
 Frame = +2

Query: 146  TTITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAPSQFLQGTSSSAPTINPEYQVW 325
            TT++++LDR NY  W+S VL  +R    DG+++GT   P QF+  T+ +    NP+Y+ W
Sbjct: 19   TTVSVKLDRDNYLLWKSLVLPLIRGCKLDGYIIGTKECPEQFIS-TNDTTKKNNPDYEEW 77

Query: 326  IRRDSYLFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKK 505
            I  D  L  WL +S++  +   +  C  S ++W+  + L  + +K+R ++L+     T+K
Sbjct: 78   IAHDQALLGWLRNSVAIDIATQLLHCETSKELWNEAQSLTGAHTKSRTIYLKSEFHNTRK 137

Query: 506  GDLSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQ 685
            G + +D Y+LKM+ ++D L  A   IS  DLI+  L GL  ++  VVV L+++  +L   
Sbjct: 138  GQMKMDQYLLKMKNLSDKLKLAGSPISSSDLIIQTLNGLDADYNPVVVKLSDQI-NLNWV 196

Query: 686  EVQFSLQSHEMRIXXXXXXXXXXXXXVH--VAQRRFNNSENISPXXXXXXXXXXXXXXXX 859
            ++Q  L + E R+                  +Q  F ++++ +                 
Sbjct: 197  DLQAQLLAFENRMEQLNNFSNLSMNASANLASQTHFRSNKSGTRGNWRGSNFRGGRGRGR 256

Query: 860  XXPACQICGKTNHLASKCFKRFDVSFVGLDAPSQFNPQAHLSEVSQYSPSLPQAMTASLP 1039
              P CQ+C K  H   +CF RFD S+   +  ++ N Q + S                  
Sbjct: 257  SKPTCQVCNKIGHTTVQCFYRFDKSYTCSNHYAENNKQENHS------------------ 298

Query: 1040 QAVNVTSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGS 1162
             A   + Y   D  WY DSGA+ HVT +   L   S  +G+
Sbjct: 299  -AFIASPYHGQDYEWYFDSGANNHVTHQNEKLQDLSESNGN 338


>ref|XP_015388800.1| PREDICTED: uncharacterized protein LOC107178344 [Citrus sinensis]
          Length = 877

 Score =  353 bits (907), Expect = e-104
 Identities = 157/297 (52%), Positives = 212/297 (71%), Gaps = 3/297 (1%)
 Frame = +3

Query: 1311 CNVVSTSSLDVWHQRLGHPCINTFASVMKHLHIPFSCNKLS---FCEACKVGKLHSISFP 1481
            CN   T   ++ H+R+GHP  +    +MK L   F  +K S   FC+AC++GK H   FP
Sbjct: 449  CN--KTVDYNLLHKRMGHPITHALKQIMKCLDSTFVLSKDSKPQFCDACQLGKCHMQHFP 506

Query: 1482 SIQSKSVAPFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLN 1661
            SI++    P +L+++D+WGPA   S  GY YY+  LD++TR+TWIFPL +K    S  ++
Sbjct: 507  SIETSITQPLELLHADLWGPAPITSSQGYSYYLSILDDYTRYTWIFPLTTKSKTLSAFID 566

Query: 1662 FISMVERQFSTKIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIV 1841
            F +M+E   + +IK  Q DW GE+R   S     GI+FRHPCP+ H QN   ERKH+HIV
Sbjct: 567  FKNMIENCLNLRIKCLQTDWGGEFRPFVSYLSEQGIQFRHPCPYIHHQNRKIERKHRHIV 626

Query: 1842 DLGLTLLSHAQLPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGC 2021
            + GLTLL+ A LPL+FWW+AF T+TYLIN LPTP+L+N SPF+KLF+++PDY+ +K FGC
Sbjct: 627  ETGLTLLAQAHLPLKFWWNAFHTATYLINRLPTPILNNKSPFEKLFHKLPDYTMMKVFGC 686

Query: 2022 ACFPYLRPYNNHKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPY 2192
            +C+PYLRPYN+HKLQFRS +C+FLGYSS HKGY+CLH SGR+YI+  V F+E  FP+
Sbjct: 687  SCYPYLRPYNHHKLQFRSERCVFLGYSSLHKGYQCLHLSGRVYISNHVTFDESFFPF 743


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1165

 Score =  355 bits (911), Expect = e-102
 Identities = 167/339 (49%), Positives = 225/339 (66%), Gaps = 1/339 (0%)
 Frame = +3

Query: 1179 DKTTNQILLKGALKGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRL 1358
            DK T +ILL+G +K GLYQL     S   +                 V  S  + WH++L
Sbjct: 327  DKLTGRILLEGKIKDGLYQLPGGSTSTNKRPH---------------VFFSIKETWHRKL 371

Query: 1359 GHPCINTFASVMKHLHIPFS-CNKLSFCEACKVGKLHSISFPSIQSKSVAPFDLIYSDVW 1535
            GHP       VMK  +I  S C    FCEAC+ GK H++ F +  S +  P DL++SDVW
Sbjct: 372  GHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPLDLVHSDVW 431

Query: 1536 GPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKAFQC 1715
            GPA   S  G+KYYV FLD+++RFTWI+PL  K DV+   + F ++VE QF+ +IK  QC
Sbjct: 432  GPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQFNKRIKTLQC 491

Query: 1716 DWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLRFWW 1895
            D  GE++ LS     +GI+ R  CP+T  QNG  ERKH+H+V+ GLTLL+ A++PL +WW
Sbjct: 492  DGGGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVESGLTLLAQAKMPLHYWW 551

Query: 1896 DAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQFRS 2075
            +AFST+ +LIN LPT V+ N SP+Q+LF++ PDY+ +K FGCAC+P L+PYN HKLQF +
Sbjct: 552  EAFSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKLQFHT 611

Query: 2076 SKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPY 2192
            +KC+FLGYS  HKGYKCL+ +GRI+I+R V FNE  FP+
Sbjct: 612  TKCVFLGYSGSHKGYKCLNSTGRIFISRHVVFNEHHFPF 650



 Score =  141 bits (356), Expect = 1e-30
 Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
 Frame = +3

Query: 2409 HSMVTRSKNGIYKPKA-FVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTW 2585
            H M TRSK GI KPK  +V +   +    EP +  +AL +P WK AM  EF AL+ N TW
Sbjct: 737  HQMTTRSKMGIIKPKKPYVGAVEKTLEEQEPETTYEALENPEWKKAMIAEFKALMMNKTW 796

Query: 2586 DLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLT 2765
             LVP     N+I  KWVFK K++ADG++ER KARLVA+GFQQ  GLDY ETFSPV+K +T
Sbjct: 797  TLVPYQGQKNIIDCKWVFKTKYKADGTIERRKARLVAKGFQQTLGLDYDETFSPVIKAIT 856

Query: 2766 IRIMFSLVVTRGWSIQ 2813
            +RI+ S+ V   W I+
Sbjct: 857  VRIILSIAVHFNWEIR 872



 Score = 96.3 bits (238), Expect = 1e-16
 Identities = 79/279 (28%), Positives = 117/279 (41%), Gaps = 19/279 (6%)
 Frame = +2

Query: 401  CSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKKGDLSVDDYVLKMRGIADTLLAADQE 580
            C  S QIW   + L  + +++RI  L+     T+KG L +++Y+ KM+ IAD L  A   
Sbjct: 12   CETSQQIWEDAQSLAGAHTRSRITFLKTEFHRTRKGGLKMEEYLTKMKEIADDLALAGSS 71

Query: 581  ISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQEVQFSLQSHEMRIXXXXXXXXXXXX 760
            +S  DL+   LAGL  E+  +VV L+++ + LT  E+Q  L ++E R+            
Sbjct: 72   VSTMDLVTQTLAGLDNEYNPIVVQLSDK-EHLTWVEMQAQLLTYENRLEQIN-------- 122

Query: 761  XVHVAQRRFNNSENISPXXXXXXXXXXXXXXXXXXP-------------------ACQIC 883
              + +    N S NIS                                        CQ+C
Sbjct: 123  --NQSNLTLNPSSNISTILYNRRGKSNAFGGGRGGQINRGARGGRGRGRATKDRIVCQVC 180

Query: 884  GKTNHLASKCFKRFDVSFVGLDAPSQFNPQAHLSEVSQYSPSLPQAMTASLPQAVNVTSY 1063
             K  H AS C+ RF+ +++G ++  Q       SE  +       A  AS P  V     
Sbjct: 181  CKPGHAASHCYHRFNKNYIGQNSDEQ------KSEKDKEQNYNFNAYVAS-PSTVE---- 229

Query: 1064 PATDNSWYVDSGASAHVTSELGNLSLKSPYHGSDKLTVG 1180
               D  WY DSGAS HVT +   +   +   G   LTVG
Sbjct: 230  ---DLDWYFDSGASNHVTYDQNKVQEVNENDGKSFLTVG 265


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score =  283 bits (723), Expect(2) = 2e-98
 Identities = 144/350 (41%), Positives = 207/350 (59%), Gaps = 9/350 (2%)
 Frame = +3

Query: 1179 DKTTNQILLKGALKGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLD------ 1340
            D+ T Q LLKG LK GLY+   S  +                     VSTSS+       
Sbjct: 329  DQVTKQTLLKGWLKDGLYEFPSSSSTHAF------------------VSTSSIPALTPGA 370

Query: 1341 VWHQRLGHPCINTFASVMKHLH--IPFSCNKLSFCEACKVGKLHSISFPSIQSKSVAPFD 1514
            +WH RLGHP     +  +   +  + F  NK++ C+ C + K HS+ +    S +  P  
Sbjct: 371  IWHSRLGHPAAPILSKALAFCNPSVSFQINKIAPCKICPLAKSHSLPYSLSSSHASQPLA 430

Query: 1515 LIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFST 1694
            LI++D+WGPA +PS    +Y++ F+D+++R+TWI+ L +K    ST + F  M+E Q ++
Sbjct: 431  LIHTDLWGPAPSPSTSSARYFLLFIDDYSRYTWIYFLSTKDQALSTFITFRKMIENQLNS 490

Query: 1695 KIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQ 1874
             IK  Q D  GE+       ++ GI  +  CPHT  QNG  +RK +H+V+ G+ LL+ + 
Sbjct: 491  TIKCIQSDNGGEFIAFKPYLEAHGIVHQFSCPHTPQQNGRAKRKIRHLVETGMALLAQSF 550

Query: 1875 LPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNN 2054
            LP ++W  AF TS YLINLLPT +L+  SP Q LF++IP+Y  L+ FGC CFP LRPYN+
Sbjct: 551  LPSKYWSFAFQTSVYLINLLPTKLLNFQSPLQVLFHKIPNYHHLRVFGCLCFPSLRPYNH 610

Query: 2055 HKLQFRSSKCIFLGYSSQHKGYKCLHPS-GRIYIARTVAFNECEFPYTQL 2201
            HKL +RS+ C+FLGY+S HKGY CL  S  R+YI+R V F+E  FP+  +
Sbjct: 611  HKLSYRSTACVFLGYASAHKGYICLDVSTSRLYISRDVLFHESSFPFQSI 660



 Score =  107 bits (268), Expect(2) = 2e-98
 Identities = 71/232 (30%), Positives = 108/232 (46%)
 Frame = +2

Query: 494  TTKKGDLSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDS 673
            T KKG   + +Y+LK++ I+D L A  + + + D IL +L GLG E+ S+V +LT R D 
Sbjct: 120  TAKKGADPMLEYILKIKTISDNLAAIGEPVKETDHILQLLGGLGSEYNSIVASLTAREDD 179

Query: 674  LTLQEVQFSLQSHEMRIXXXXXXXXXXXXXVHVAQRRFNNSENISPXXXXXXXXXXXXXX 853
            L+L  +   L +HE R              V  +  R +N  +  P              
Sbjct: 180  LSLHSIHNILLTHEQR----------NRQHVPFSHTRPHNRPHNRPANRFSSSAPHRPPH 229

Query: 854  XXXXPACQICGKTNHLASKCFKRFDVSFVGLDAPSQFNPQAHLSEVSQYSPSLPQAMTAS 1033
                P CQ+CGK  H   KC+ RFD+++ G +  S           SQ S  L QAM   
Sbjct: 230  LPTRPQCQLCGKFGHTVVKCYHRFDITYQGTNGVSS----------SQDSSPL-QAM--- 275

Query: 1034 LPQAVNVTSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGSDKLTVGQNN 1189
                  +T  P   +SW+ D+GA+ H++     LS   PY G+D++T+   +
Sbjct: 276  ------LTIAPDHQDSWFFDTGATHHLSHSAQTLSHVQPYSGADQVTIADGH 321



 Score = 92.0 bits (227), Expect = 2e-15
 Identities = 48/135 (35%), Positives = 77/135 (57%)
 Frame = +3

Query: 2409 HSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTWD 2588
            H MVTR+K+GI+K K+F++ +++     EP + SQA     W  AM  E+ AL+ NHTW 
Sbjct: 734  HPMVTRAKSGIHKKKSFLMQTTS-----EPHTYSQAFKSEPWVQAMQHEYQALLRNHTWS 788

Query: 2589 LVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTI 2768
            LVPP    +++  +W++K+K+  +GSVE+ KARL +                   +  TI
Sbjct: 789  LVPPPPSAHIVGCRWIYKLKYLPNGSVEKHKARLSS------------------CEACTI 830

Query: 2769 RIMFSLVVTRGWSIQ 2813
            R++ +L V+  W I+
Sbjct: 831  RLILALAVSFQWPIR 845



 Score = 83.2 bits (204), Expect = 1e-12
 Identities = 42/103 (40%), Positives = 62/103 (60%)
 Frame = +2

Query: 383 LGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKKGDLSVDDYVLKMRGIADTL 562
           +G +     S   W  L K+F + SKARI+ LRL  QT KKG   + +Y+LK++ I+D L
Sbjct: 1   MGQIVGFQTSHDAWMALHKIFSALSKARILQLRLEFQTAKKGADPMLEYILKIKTISDNL 60

Query: 563 LAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQEV 691
            A  + + + D IL +L GLG E+ S+V +LT R D L+L  +
Sbjct: 61  AAIGEPVXETDHILQLLGGLGSEYNSIVASLTAREDDLSLHSI 103


>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
          Length = 1270

 Score =  342 bits (878), Expect = 2e-97
 Identities = 160/299 (53%), Positives = 208/299 (69%), Gaps = 4/299 (1%)
 Frame = +3

Query: 1311 CNVVSTSSLDVWHQRLGHPC---INTFASVMK-HLHIPFSCNKLSFCEACKVGKLHSISF 1478
            C   S    DV HQRLGH     IN   S+ K  LHI  S   L+FCEAC++GK H   F
Sbjct: 624  CLNTSCIDFDVLHQRLGHASEAVINKVLSLYKPDLHINKS---LAFCEACQLGKNHLCHF 680

Query: 1479 PSIQSKSVAPFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVL 1658
                SK+ AP +L+++DVWGPAAT S +GY+YY+HF+D+++RFTWI+P+  K +      
Sbjct: 681  SLSNSKASAPLELVHTDVWGPAATVSKEGYRYYIHFIDDYSRFTWIYPMTVKSEALFIFK 740

Query: 1659 NFISMVERQFSTKIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHI 1838
            +F  MVER F TK+K  Q DW GEYR      Q  GIKFRH CP+ H QNG  ERKH+HI
Sbjct: 741  HFHVMVERLFDTKLKVVQSDWGGEYRCFLPYLQQVGIKFRHSCPYMHQQNGRAERKHRHI 800

Query: 1839 VDLGLTLLSHAQLPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFG 2018
            V++GL+ L+ A +PL +WW+AF+++ Y+IN LPT +L   SPF+ LF ++PDY FLK FG
Sbjct: 801  VEVGLSFLAQAHMPLLYWWEAFTSAVYVINRLPTAILDFHSPFELLFKKVPDYDFLKVFG 860

Query: 2019 CACFPYLRPYNNHKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYT 2195
             ACFP+LRP+ NHK QF + KC+F+GYS  HKGYKC+  SG+IYIAR+V FNE EFP++
Sbjct: 861  SACFPFLRPFQNHKFQFHTEKCVFIGYSDDHKGYKCMSSSGKIYIARSVNFNEKEFPFS 919



 Score =  167 bits (424), Expect = 7e-39
 Identities = 77/141 (54%), Positives = 105/141 (74%), Gaps = 1/141 (0%)
 Frame = +3

Query: 2394 VIHPNHSMVTRSKNGIYKPKAFVLSSSASSHV-IEPSSVSQALSDPGWKAAMDLEFNALI 2570
            +I   H M TRSK+G++KPK F L+  A+  V +EP SV+ AL++P WKAAMD E+ AL+
Sbjct: 1012 IIISTHPMQTRSKSGVFKPKVFALTQQAADSVDVEPVSVTDALTNPRWKAAMDQEYGALV 1071

Query: 2571 HNHTWDLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPV 2750
             N+TW LVP  + MNLI +KW+F+VK  ADG+V+R KARLVA+GF Q PG D+ ETFSPV
Sbjct: 1072 KNNTWSLVPYHSGMNLIGHKWIFRVKRNADGTVQRYKARLVAKGFHQQPGFDFNETFSPV 1131

Query: 2751 VKPLTIRIMFSLVVTRGWSIQ 2813
            +KP TIR++ SL ++  W ++
Sbjct: 1132 IKPTTIRLVLSLAISHNWEVR 1152



 Score =  123 bits (308), Expect = 6e-25
 Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 8/202 (3%)
 Frame = +2

Query: 143 FTTITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAPSQFLQGTSSSAPTINP---- 310
           F++  ++L+  N+  W+SQ+L+ +R H  D F+L   T   +F+Q    S   +N     
Sbjct: 22  FSSSIMKLNSENFLVWKSQILSILRGHKLDKFVL---TDEPEFMQVFVFSDAEVNDHSLS 78

Query: 311 ----EYQVWIRRDSYLFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHL 478
               E QVWI +D  L  WL ++I    L  +     S ++W  +E+ +   S+  ++ L
Sbjct: 79  KFSVEQQVWILQDQLLLGWLTTTIEVEELADLVGLKTSRRLWITIEETYSCHSEVFMLQL 138

Query: 479 RLLLQTTKKGDLSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLT 658
           R  LQTTKKG + + DY  KM+ IAD + +    +S+ +L++ IL GLGPEFE+V VN T
Sbjct: 139 RNELQTTKKGSMKILDYCKKMKKIADKMCSGGFLVSEKELVMCILNGLGPEFETVRVNYT 198

Query: 659 NRSDSLTLQEVQFSLQSHEMRI 724
           +R    +LQEV+  L  +E  I
Sbjct: 199 SRPPLPSLQEVKHFLSHYETTI 220


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1268

 Score =  341 bits (874), Expect = 7e-97
 Identities = 175/344 (50%), Positives = 215/344 (62%), Gaps = 4/344 (1%)
 Frame = +3

Query: 1182 KTTNQILLKGAL-KGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRL 1358
            + TN+ILL+G +   GLY      L  P                      SS   WH RL
Sbjct: 365  QVTNEILLQGVVGSDGLYSFSNLELQGPSVLVSSSMASSVDPAVSAFAIPSSHTSWHTRL 424

Query: 1359 GHPCINTFASVMKHLHI-PFSCNKLSFCEACKVGKLHSISFPSIQSKSV--APFDLIYSD 1529
             HP  +    V+ H +I P + N   FC +C VGK H +  PS+ S+SV  AP DLI++D
Sbjct: 425  SHPNSHVLKLVLNHCNIAPSNRNVSEFCSSCCVGKSHRL--PSLVSESVYSAPLDLIFTD 482

Query: 1530 VWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKAF 1709
            +WGP+   S  GY YYV F+D F++FTWI+PL SK D  S    F +MVE Q +TKIK+ 
Sbjct: 483  LWGPSHVVSHSGYVYYVSFIDAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSI 542

Query: 1710 QCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLRF 1889
            Q DW GEYR  ++   + GI  R  CPHTH QNG+ ERKH+HIVD+G+TLL HA LPL F
Sbjct: 543  QSDWGGEYRSFTAFLATHGITHRLICPHTHHQNGVVERKHRHIVDIGITLLHHASLPLTF 602

Query: 1890 WWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQF 2069
            W  AFST+ YLIN LPT  L+   PF  LF + PDY FLK FGCACFP+LRPY  HKL F
Sbjct: 603  WDYAFSTAVYLINRLPTASLNFDIPFTVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDF 662

Query: 2070 RSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
            RS +C+FLGYS+ HKGYKCL  SG+IYI++ V FNE  FPY  L
Sbjct: 663  RSQECVFLGYSNSHKGYKCLSASGKIYISKDVIFNETRFPYLDL 706



 Score =  154 bits (390), Expect = 9e-35
 Identities = 75/135 (55%), Positives = 96/135 (71%)
 Frame = +3

Query: 2406 NHSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTW 2585
            NHSM TRSK+GIYKPK       A S   EP +V QALSDP W +AM  E++AL+ NHTW
Sbjct: 788  NHSMQTRSKSGIYKPKMPPSLFLAHS---EPKNVKQALSDPDWFSAMKQEYSALLQNHTW 844

Query: 2586 DLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLT 2765
            DLVP  ++   +  KWVF+VK  ADGS+ + KARLVA+GF Q+ G D+ ETFSPV+KP+T
Sbjct: 845  DLVPLPSNRQAVGCKWVFRVKENADGSINKFKARLVAKGFHQVHGFDFHETFSPVIKPIT 904

Query: 2766 IRIMFSLVVTRGWSI 2810
            IRI+ +L +T  W +
Sbjct: 905  IRIIITLALTYNWHL 919



 Score = 89.7 bits (221), Expect = 1e-14
 Identities = 74/298 (24%), Positives = 126/298 (42%), Gaps = 19/298 (6%)
 Frame = +2

Query: 344  LFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKKGDLSVD 523
            L +WL S++S+S+L  V    +S Q+W  + + F + +KA    LR  L+TT     ++ 
Sbjct: 2    LLTWLQSTLSKSILSRVIGSVHSYQVWEKIHEYFHTQTKACARQLRTDLRTTSLDGKTMR 61

Query: 524  DYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQEVQFSL 703
            +++ +++ IAD L         D+ +  IL GL  ++  VV  + ++  +  + EV+  L
Sbjct: 62   EFLSQIKNIADELAGVGHPFPLDEYVDAILEGLPQDYAPVVSVIESKFATPPIAEVEALL 121

Query: 704  QSHEMRIXXXXXXXXXXXXXVHVAQRRFNNSENISPXXXXXXXXXXXXXXXXXXPACQIC 883
             +HE R                    R + +                         CQIC
Sbjct: 122  LAHESRNNRFCKQSFSPSINYTHGYARGSVNHGGGNSGRRGGSSGRGRGGRFANFQCQIC 181

Query: 884  GKTNHLASKCFKRFDVSFVGLDA----------PSQFNPQAHLSEVS-------QYSPSL 1012
             K +H A+ CF R D ++   D+          P Q N    +++ S          PS 
Sbjct: 182  LKYSHTANICFYRADANYHPHDSLVLYDPSTLQPVQVNSPPSITKTSNSWGNPTSKQPSQ 241

Query: 1013 PQAMTASLPQAV--NVTSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGSDKLTVG 1180
               + +  P A+  N  S  A +++W  DSGAS HVT E  N+     + G D++ +G
Sbjct: 242  DTNVNSVTPSAMLANTPSQGAVNSTWIPDSGASFHVTGEPQNVHQLGHFDGPDQIFIG 299


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score =  345 bits (885), Expect = 9e-97
 Identities = 167/351 (47%), Positives = 218/351 (62%), Gaps = 32/351 (9%)
 Frame = +3

Query: 1179 DKTTNQILLKGALKGGLYQLDLSHLSA-----------------------PVKXXXXXXX 1289
            DK + +ILL+G LK GLYQLD+S +S+                        V        
Sbjct: 360  DKKSREILLQGNLKEGLYQLDISKVSSNRQFVGFSEDTNVFLPHLATTPSTVNKQSVAPS 419

Query: 1290 XXXXXKQCNVVSTSSLD--------VWHQRLGHPCINTFASVMKHLHIPFSC-NKLSFCE 1442
                 +   + ST  ++        +WHQRLGHPC    + V+  L I     N+L+FC 
Sbjct: 420  VGYSLQVNKIESTRCVEDNNTGVGHLWHQRLGHPCNKIVSLVLDRLGIKSKLQNELNFCT 479

Query: 1443 ACKVGKLHSISFPSIQSKSVAPFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFP 1622
            AC +GK      P+  +K+  PF+L++SDVW PA T SCDGYKYY+ F+D FT +TWI+P
Sbjct: 480  ACPLGKAKQFPLPTTINKTQVPFELVFSDVWEPAHTTSCDGYKYYIAFVDAFTNYTWIYP 539

Query: 1623 LVSKCDVYSTVLNFISMVERQFSTKIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHT 1802
               K    S VL FI++V+R+F TK+K  Q DW GE+  L S  Q  GI FRHPCPH H 
Sbjct: 540  RQQKSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFHPLQSLLQKKGILFRHPCPHVHQ 599

Query: 1803 QNGMPERKHQHIVDLGLTLLSHAQLPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFN 1982
            QNG  ERKH+ IV++GLTLL+ +QLP  FWW AFST+TYL+N LPTPVLH  +P++ LF 
Sbjct: 600  QNGKVERKHRSIVEIGLTLLAKSQLPFTFWWHAFSTATYLLNRLPTPVLHCKTPYELLFK 659

Query: 1983 RIPDYSFLKAFGCACFPYLRPYNNHKLQFRSSKCIFLGYSSQHKGYKCLHP 2135
              PD+ FLK FGCAC+PYLRPY NHKL+++S++C F+GYS  HKGY C+ P
Sbjct: 660  SSPDFLFLKTFGCACYPYLRPYKNHKLEYQSTQCTFIGYSLSHKGYLCVSP 710



 Score =  190 bits (483), Expect = 8e-46
 Identities = 115/296 (38%), Positives = 153/296 (51%), Gaps = 29/296 (9%)
 Frame = +2

Query: 380  MLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKKGDLSVDDYVLKMRGIADT 559
            M GHV  C  SA++WSVLEKLF S+SKAR + LR +LQ+ KKG LS++DYVLKMR IAD 
Sbjct: 1    MYGHVVNCQTSAEVWSVLEKLFVSNSKARTLQLRFMLQSLKKGALSINDYVLKMRNIADM 60

Query: 560  LLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQEVQFSLQSHEMRI-XXXX 736
            L A+ + + D+DLILYIL GLGPEFE++VVN+T+RS++++LQEV + LQSHE+R+     
Sbjct: 61   LSASGKPVPDEDLILYILGGLGPEFETIVVNITSRSEAISLQEVHYLLQSHEIRLEQLSA 120

Query: 737  XXXXXXXXXVHV----AQRRFNNSENISPXXXXXXXXXXXXXXXXXXPACQICGKTNHLA 904
                      H+     Q    N                          CQ+CGK  H A
Sbjct: 121  ASVIDVPPAAHITIGGVQNSNTNDGQFKSSSSKNFRPRNVCNPQTSRIVCQLCGKMGHTA 180

Query: 905  SKCFKRFDV-----------SFVGLDAPSQFN---PQAHLSEVSQYSPSLPQA------- 1021
             KCF RFDV            F  L  P Q     P  H  +     P +P         
Sbjct: 181  MKCFHRFDVYFQSPPHAQNQQFSSLHQPQQPQLRPPPLHQPQYYSIGPLVPSRPIQNSHQ 240

Query: 1022 ---MTASLPQAVNVTSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGSDKLTVG 1180
                T + P A  V     ++ SW+VDSGA+ H+T++   L +   Y G+  + VG
Sbjct: 241  QLDSTNTSPHAYIVAPDLNSNTSWFVDSGATHHMTTDSNTLDVFDHYSGTGNVVVG 296



 Score =  142 bits (358), Expect = 9e-31
 Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 8/287 (2%)
 Frame = +3

Query: 1341 VWHQRLGHPCINTFASVMKHLHI----PFSCNKLSFCEACKVGKLHSISFPSIQSKSVA- 1505
            +WH+RLGH  ++  + + K   +      +  K   CEAC++GK    SF +    S + 
Sbjct: 1034 LWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKICEACQMGKQIKNSFKNKNFISTSR 1093

Query: 1506 PFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQ 1685
            P +L++ D++GP+ TPS  G  Y    +D+F+R+TW+  L  K + +     F + V+ +
Sbjct: 1094 PLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNE 1153

Query: 1686 FSTKIKAFQCDWRGEYRKLSSQ--FQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTL 1859
                I   + D   E+     +      GI      P T  QNG+ ERK++ + ++  T+
Sbjct: 1154 KGFSITCIRSDHGREFENFDFEEYCNKHGINHNFSAPRTPQQNGVVERKNRTLQEMARTM 1213

Query: 1860 LSHAQLPLRFWWDAFSTSTYLIN-LLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPY 2036
            L+   LP  FW +A +TS Y++N +L  P+L   +P++   N+ P+ S+ K FGC CF  
Sbjct: 1214 LNENNLPKYFWAEAVNTSCYVLNRILLRPILKK-TPYELWKNKKPNISYFKVFGCKCFIL 1272

Query: 2037 LRPYNNHKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNE 2177
                N  K   +S   IFLGYS+  K +       R++  RT+   E
Sbjct: 1273 NTKDNLGKFDAKSDVGIFLGYSTSSKAF-------RVFNKRTMVVEE 1312



 Score = 61.2 bits (147), Expect = 8e-06
 Identities = 29/66 (43%), Positives = 45/66 (68%)
 Frame = +3

Query: 2586 DLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLT 2765
            +LVP  ++ ++I  KWVF+ K   +G + R KARLVA+G+ Q  G+DY ETF+PV +   
Sbjct: 1405 ELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGIDYEETFAPVARLEA 1464

Query: 2766 IRIMFS 2783
            IR++ +
Sbjct: 1465 IRMLLA 1470


>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
          Length = 1143

 Score =  336 bits (861), Expect = 9e-96
 Identities = 152/293 (51%), Positives = 201/293 (68%), Gaps = 3/293 (1%)
 Frame = +3

Query: 1332 SLDVWHQRLGHPCINTFASVMKHLHIPFSCN---KLSFCEACKVGKLHSISFPSIQSKSV 1502
            S  V+HQRLGHP  +    V+K      + N       C+ACK+GK+H + F   ++K+ 
Sbjct: 534  STSVFHQRLGHPSSHVLNHVIKTCSFVKTINGNRTFDSCDACKMGKMHRLHFSVTETKTK 593

Query: 1503 APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVER 1682
             P +++++D+WGP+   S  GY+YYV F+D+ TRFTWIFPL +K +       F + +E+
Sbjct: 594  FPLEILHTDLWGPSPVISPQGYRYYVSFVDDCTRFTWIFPLKTKDETLPVFKIFKTQIEK 653

Query: 1683 QFSTKIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLL 1862
            QFS  IK  Q DW GE+R   +   + GI+FRH CP+TH QNG+ ERKH+HI +LGLTLL
Sbjct: 654  QFSRPIKCLQSDWGGEFRSFVNYLLAEGIQFRHLCPYTHNQNGLVERKHRHITELGLTLL 713

Query: 1863 SHAQLPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLR 2042
            + A +PL+FWWD+F T+TY+IN LPTPVL   SP++ LF   PDY FL+ FGC+CF +LR
Sbjct: 714  AQAAMPLKFWWDSFHTATYIINRLPTPVLSIKSPYESLFQLSPDYKFLRVFGCSCFLFLR 773

Query: 2043 PYNNHKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
             YN HK QF +SKC+FLGYS  HKGYKCLHPSGR YIA  V F+E  FPY+ L
Sbjct: 774  EYNKHKFQFHTSKCVFLGYSPLHKGYKCLHPSGRTYIASHVLFDESSFPYSSL 826



 Score =  103 bits (258), Expect = 5e-19
 Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 4/204 (1%)
 Frame = +2

Query: 125 AFSLPTFTTITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAP-SQFLQGTSSSAPT 301
           A S  TF T  ++LD+SN+  WRSQVLA++R +  + F+  ++T P S   Q       +
Sbjct: 21  AISSFTFNT-PVKLDQSNFLIWRSQVLASIRGNRLEKFIDDSATPPPSHIAQRIGDDIRS 79

Query: 302 I-NPEYQVWIRRDSYLFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHL 478
           + NPE                                     S +E  F S SK+R++HL
Sbjct: 80  VENPE-------------------------------------SAIETQFGSQSKSRLLHL 102

Query: 479 RLLLQTTKKGDLSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLT 658
           R ++ +T+K DL ++DY +KM+ IAD + AA   +++DDLIL+IL+GLGPE+ SV   +T
Sbjct: 103 RYMMNSTRKDDLKINDYFIKMKSIADNMAAAGSALNNDDLILHILSGLGPEYNSVATYIT 162

Query: 659 NR--SDSLTLQEVQFSLQSHEMRI 724
            +     + + E    L + E RI
Sbjct: 163 GQVGVGKMNVNEAYAMLLTQEARI 186


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  337 bits (863), Expect = 1e-94
 Identities = 173/343 (50%), Positives = 217/343 (63%), Gaps = 2/343 (0%)
 Frame = +3

Query: 1179 DKTTNQILLKGALKGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRL 1358
            D+ T + LLKG     LY L  S L                 KQ       SLD WH RL
Sbjct: 415  DQITRKTLLKGRSWRRLYPLPHSSL-----------------KQAYSAIKLSLDRWHHRL 457

Query: 1359 GHPCINTFASVMKHLHIPFS-CNKLSFCEACKVGKLHSISFPSIQSKSVAPFDLIYSDVW 1535
            GHP I T   V+    +P S  +  S C AC+  K H + FP   S S  P +L++SDVW
Sbjct: 458  GHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKHPLELVFSDVW 517

Query: 1536 GPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKAFQC 1715
            GPA   S    KYYV F+D+F++FTWI+ +  K  V+     F  MVERQF  KI A Q 
Sbjct: 518  GPAPE-SVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQT 576

Query: 1716 DWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLRFWW 1895
            DW GEY+ L+S F   GI     CPHTH QNG  ERKH+HIV++GL+LLSHA +PL+FW 
Sbjct: 577  DWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWD 636

Query: 1896 DAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQFRS 2075
            +AF  +TYLIN +P+ V+HN+SP +KLF + PDYS L+ FGCAC+P LRPYNNHKLQFRS
Sbjct: 637  EAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRS 696

Query: 2076 SKCIFLGYSSQHKGYKCLHPS-GRIYIARTVAFNECEFPYTQL 2201
             +C+FLG+S+ HKG+KCL  S GRIYI+R V F+E  FP+T+L
Sbjct: 697  KRCVFLGFSTMHKGFKCLEVSTGRIYISRDVVFDENIFPFTEL 739



 Score =  137 bits (344), Expect = 3e-29
 Identities = 95/363 (26%), Positives = 162/363 (44%), Gaps = 23/363 (6%)
 Frame = +2

Query: 152  ITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAPSQFLQGTSSSAPTI--NPEYQVW 325
            I+ +L ++N++ W+ QV A VR     G L G +  P   +  T   A     NP ++ W
Sbjct: 18   ISEKLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVTKDGATKKEPNPAHEDW 77

Query: 326  IRRDSYLFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKK 505
               D  +  +LLSS++  +L  V  C  +A++WS +E+++ + ++AR ++ R  L  TKK
Sbjct: 78   EATDQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYSTHTRARAINTRFALTNTKK 137

Query: 506  GDLSVDDYVLKMRGIADTL-LAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTL 682
            G++S  +Y  KM+ + D +  A  + I +++LI YI+ GLG  +  VV  +  R + +++
Sbjct: 138  GNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVSAVCARVEPISV 197

Query: 683  QEVQFSLQSHEMRIXXXXXXXXXXXXXVHVAQR---------RFNNSENIS--------- 808
             ++   + + E R              V+VA R           N  +  S         
Sbjct: 198  SDLYSQVLNFEAR---QAIYRGAQEVTVNVANRGGFSHGGRGNSNGGQGGSRGGGGGGGH 254

Query: 809  --PXXXXXXXXXXXXXXXXXXPACQICGKTNHLASKCFKRFDVSFVGLDAPSQFNPQAHL 982
                                 P CQ+C K  H A+ C+ R+D  +V              
Sbjct: 255  GRGNGGGGHGRGRTPGGVDKRPICQVCFKRGHTAADCWYRYDEDYV-------------- 300

Query: 983  SEVSQYSPSLPQAMTASLPQAVNVTSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGS 1162
                      P A   +   A  V SY   D +WY+D+GA+ HVT EL  L++K  Y+G 
Sbjct: 301  ----------PDAKHVA---AAAVNSY-GVDTNWYIDTGATDHVTGELDKLTMKEKYNGG 346

Query: 1163 DKL 1171
            +++
Sbjct: 347  EQI 349



 Score =  135 bits (340), Expect = 1e-28
 Identities = 66/136 (48%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
 Frame = +3

Query: 2421 TRSKNGIYKPKAFVLSSSASSHVI-----EPSSVSQALSDPGWKAAMDLEFNALIHNHTW 2585
            TR ++G+ K K +   +    H       EP++  +AL D  WK AMD E++AL+ N TW
Sbjct: 915  TRLQSGVRKEKVYTDGTIKYKHSWFTASGEPTNDLEALKDKNWKLAMDSEYDALVKNKTW 974

Query: 2586 DLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLT 2765
             LVPP    N+I  KWV+K+K +ADG+++R KARLVA+GF+Q  G+DY +TFSPVVK  T
Sbjct: 975  HLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 1034

Query: 2766 IRIMFSLVVTRGWSIQ 2813
            IRI+ SL V++GWS++
Sbjct: 1035 IRIILSLAVSKGWSLR 1050


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  336 bits (862), Expect = 2e-94
 Identities = 161/346 (46%), Positives = 216/346 (62%), Gaps = 6/346 (1%)
 Frame = +3

Query: 1179 DKTTNQILLKGALKGGLYQLDLSHLSA----PVKXXXXXXXXXXXXKQCNVVSTSSLDVW 1346
            D+ T  +L+ G ++ GLY  D SHL+      +             K C    +S+ D+W
Sbjct: 465  DQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLW 524

Query: 1347 HQRLGHPCINTFASVMKHLHIPFSCNKL--SFCEACKVGKLHSISFPSIQSKSVAPFDLI 1520
            H+RLGHP   T  +V+   ++    NK+  +FC +C +GK+H   F    +    P +LI
Sbjct: 525  HKRLGHPSAATIKNVLSKCNVAH-INKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELI 583

Query: 1521 YSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKI 1700
            + D+WGP    S  GY+YY+HF+D F+RF+WIF L +K +   T +NF + VE QF  KI
Sbjct: 584  HLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKI 643

Query: 1701 KAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLP 1880
            K+ Q DW GE+R   S    +GI  R  CPHT  QNG+ ERKH+ IV+ GLTLL  A LP
Sbjct: 644  KSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLP 703

Query: 1881 LRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHK 2060
            L+FW ++F T  YL N LPT +LH+  P + LF  IPDYSFLK FGC+CFP LRPYN HK
Sbjct: 704  LKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHK 763

Query: 2061 LQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQ 2198
            LQ+RS +C FLGYS +HKGYKC+  +GR+YI+  V FNE  FPY++
Sbjct: 764  LQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSK 809



 Score =  140 bits (352), Expect = 4e-30
 Identities = 68/135 (50%), Positives = 92/135 (68%)
 Frame = +3

Query: 2409 HSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTWD 2588
            H M+TR+K+GI KPK F+ +      + EPSSVS AL    WK AM  E++AL  N+TW 
Sbjct: 914  HPMITRAKSGIVKPKIFIAA------IREPSSVSAALQQDEWKKAMVAEYDALQRNNTWS 967

Query: 2589 LVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTI 2768
            LVP  A    I  KWV+K K   DG+V++ KARLVA+GF Q  G D+ ETFSPVVKP T+
Sbjct: 968  LVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTV 1027

Query: 2769 RIMFSLVVTRGWSIQ 2813
            R++F++ ++R W+I+
Sbjct: 1028 RVVFTIALSRNWAIK 1042



 Score = 77.0 bits (188), Expect = 1e-10
 Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 4/196 (2%)
 Frame = +2

Query: 149 TITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAPSQFLQGTSSSAPTINPEYQVWI 328
           +++++LD  N+  W+ Q+++ +R +G   F+         F       +P    + +  +
Sbjct: 30  SLSVKLDNKNFLIWKQQIVSAIRGYGLQKFVFSDDEVQFNF-------SPEKMRDLEKQL 82

Query: 329 RRDSYLFSWLLSSISESMLGHVNRCSNSAQIWSV----LEKLFQSSSKARIMHLRLLLQT 496
           R  S            S    +N CS       +    LE+ F S ++A+    +  LQ 
Sbjct: 83  RNSS------------SGNNRINYCSLGFSHLFLSQYFLEQYFASQTRAKAKQFKTQLQH 130

Query: 497 TKKGDLSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSL 676
           TKKG  ++D+Y+ K++   D+L +    +S  D +  IL GL  ++ES V ++  R+D  
Sbjct: 131 TKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESILDGLPNDYESFVTSVILRNDDF 190

Query: 677 TLQEVQFSLQSHEMRI 724
           +++E++  L +HE R+
Sbjct: 191 SVEEIEALLMAHESRV 206



 Score = 63.5 bits (153), Expect = 1e-06
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
 Frame = +2

Query: 866  PACQICGKTNHLASKCFKRFDVSFVGLDAPSQFNPQAHLSEVSQYSPSLPQAMTASLPQA 1045
            PACQ+CGK  H+ ++C+ RFD +F     P   + +           S P+A  +  PQ 
Sbjct: 308  PACQLCGKIGHVVAQCYYRFDHTF---QVPQNLSSR----------NSSPRAYYSFSPQV 354

Query: 1046 VNV--TSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGSDKLTVG 1180
              V  TS   +D++WY DSGAS HVT    NL   + + G +++ VG
Sbjct: 355  NGVIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVG 401


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 537

 Score =  316 bits (810), Expect = 5e-94
 Identities = 153/300 (51%), Positives = 202/300 (67%), Gaps = 3/300 (1%)
 Frame = +3

Query: 1311 CNVVSTSSLDVWHQRLGHPCINTFASVMKHLHIPFSCNKLS-FCEACKVGKLHSISFPSI 1487
            CN V  ++   WH RLGHP  +   S+ +  + P     +S FC  C++GK H +  PS 
Sbjct: 33   CNFVPYAT---WHSRLGHPHNDVMKSMFRLCNFPIINKTVSDFCTPCRLGKSHKL--PST 87

Query: 1488 QSKSV--APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLN 1661
             SK+V   PF+LIYSD+W PA   S +GY+YYV F+D  TRF WIF   SK         
Sbjct: 88   LSKTVYHTPFELIYSDLWRPAPITSDNGYQYYVTFVDAHTRFIWIFLFKSKAHTLDVFKQ 147

Query: 1662 FISMVERQFSTKIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIV 1841
            F +M++ QF   IKA Q DW GE+R  +S    +GI+ R  CPHTH QNG+ ERKH+HIV
Sbjct: 148  FHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPHTHHQNGIVERKHRHIV 207

Query: 1842 DLGLTLLSHAQLPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGC 2021
            +LGLT+L+ A LP++FW  AF TS YLIN LP+  + +  PF+KLF+++PDY+FL+ FGC
Sbjct: 208  ELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQHDVPFRKLFHQLPDYNFLRIFGC 267

Query: 2022 ACFPYLRPYNNHKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
            +CFP+LRPYN +KLQ RS +C+FLGYS+ HKGYKCL P+GRI+I++ V F E  FPY  L
Sbjct: 268  SCFPHLRPYNKNKLQLRSQECVFLGYSTSHKGYKCLAPTGRIFISKDVIFCETRFPYPSL 327



 Score =  124 bits (311), Expect = 4e-26
 Identities = 65/132 (49%), Positives = 85/132 (64%)
 Frame = +3

Query: 2409 HSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTWD 2588
            HSM TR+K GI KP    L  +      EP S  QAL++  W AAM  E+NAL++N TW 
Sbjct: 409  HSMTTRAKAGIVKP---CLQPTLLLTHTEPKSTKQALANDTWLAAMKQEYNALLNNGTWT 465

Query: 2589 LVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTI 2768
            LV    +   I  KWVF++K  +DG+V + KARLVA+GF +  G DY ETFSPVVKP+TI
Sbjct: 466  LVSLPPNKTAIGCKWVFRIKENSDGTVNKYKARLVAKGFHKQFGSDYNETFSPVVKPVTI 525

Query: 2769 RIMFSLVVTRGW 2804
            R++ +L +T  W
Sbjct: 526  RLILTLALTHHW 537


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 785

 Score =  323 bits (828), Expect = 7e-94
 Identities = 155/289 (53%), Positives = 198/289 (68%), Gaps = 3/289 (1%)
 Frame = +3

Query: 1344 WHQRLGHPCINTFASVMKHLHIPFSCNKLS-FCEACKVGKLHSISFPSIQSKSV--APFD 1514
            WH RLGHP  +   SV +  + P      S FC  C +GK H +  PS  SK+V   PF+
Sbjct: 405  WHSRLGHPHNDVIKSVFRLCNFPIINKTASDFCTPCCLGKSHKL--PSNSSKTVYHTPFE 462

Query: 1515 LIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFST 1694
            LIYSD+WGPA   S +GY+YYV F+D  TRFTWIF L  K         F +M++ QF  
Sbjct: 463  LIYSDLWGPAPITSDNGYQYYVTFVDAHTRFTWIFLLKRKAHTLDVFKQFHAMIQNQFQL 522

Query: 1695 KIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQ 1874
             IKA Q DW GE+R  +S    +GI+ R  CPHTH QNG+ ERKH+HIV+LGLT+L+ A 
Sbjct: 523  PIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPHTHHQNGVVERKHRHIVELGLTMLAQAH 582

Query: 1875 LPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNN 2054
            LP++FW  AF TS YLIN LP+  + N  PF+KLF+++PDY+FL+ FGC+CFP+LRPYN 
Sbjct: 583  LPMQFWDHAFLTSVYLINRLPSSSIQNDVPFRKLFHQLPDYNFLRIFGCSCFPHLRPYNK 642

Query: 2055 HKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
            +KLQFRS +C+FLGYS+ HKGYKCL P+GRI+I++ V F E  FPY  L
Sbjct: 643  NKLQFRSQECVFLGYSTSHKGYKCLAPTGRIFISKDVVFCETRFPYPSL 691


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  329 bits (843), Expect = 1e-93
 Identities = 161/342 (47%), Positives = 218/342 (63%), Gaps = 4/342 (1%)
 Frame = +3

Query: 1188 TNQILLKGAL-KGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRLGH 1364
            TN++LL+G++   GLY+      +   +                  S  S   WH RLGH
Sbjct: 113  TNEVLLQGSVGSDGLYKFPALLPNPSTQSVQQQQLARIFSVNTAATSPVSFATWHSRLGH 172

Query: 1365 PCINTFASVMKHLHIPF-SCNKLSFCEACKVGKLHSISFPSIQSKSV--APFDLIYSDVW 1535
            P ++    V ++ +I   S NK +FC  C +GK H +  PS  S+++   PFDL+YSD+W
Sbjct: 173  PNVDVMKHVSRNYNIQLVSNNKSNFCTPCCLGKSHRL--PSNLSRTIYNTPFDLVYSDLW 230

Query: 1536 GPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKAFQC 1715
            GPA   S  GY+YYV F+D  TRFTWI+ L SK   ++    F +MV+ Q+   IKA Q 
Sbjct: 231  GPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQT 290

Query: 1716 DWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLRFWW 1895
            DW GEYR  ++     GI+ R  CPHTH QNG+ ERKH+HIV+LGLTL++ A+LP++FW 
Sbjct: 291  DWGGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWD 350

Query: 1896 DAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQFRS 2075
             +F T+ YLIN LP+  + N  P+ KLF++ PDY  L+ FGC+CFP+LRPYN HKLQFRS
Sbjct: 351  HSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRS 410

Query: 2076 SKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
             +C+FLGYS+ HKGYKCL   GR+YI++ V FNE +FPY  L
Sbjct: 411  QECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDL 452



 Score =  146 bits (369), Expect = 3e-32
 Identities = 72/142 (50%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
 Frame = +3

Query: 2394 VIHPN--HSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNAL 2567
            +IHP+  H M TR+K+GI KP+   L  +     +EP +  QALS+P W AAM  E+NAL
Sbjct: 528  IIHPHNVHPMTTRAKDGIVKPR---LQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNAL 584

Query: 2568 IHNHTWDLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSP 2747
            +HN+TW LVP       I  KWVF+VK   +GSV++ KARLVA+GF Q  G DY ETFSP
Sbjct: 585  LHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSP 644

Query: 2748 VVKPLTIRIMFSLVVTRGWSIQ 2813
            V+KP+T+R++ +L +T  W IQ
Sbjct: 645  VIKPVTVRLILTLALTHRWPIQ 666


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  332 bits (851), Expect = 1e-93
 Identities = 168/340 (49%), Positives = 222/340 (65%), Gaps = 2/340 (0%)
 Frame = +3

Query: 1188 TNQILLKGALKG-GLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRLGH 1364
            TN++LL+G +   GLY     HL   V             K  +V S+S++  WH RLGH
Sbjct: 321  TNEVLLQGVVGADGLYSFP--HLKLQV------LDSFNFNKNSDVSSSSTM--WHTRLGH 370

Query: 1365 PCINTFASVMKHLHIPFSCNKLS-FCEACKVGKLHSISFPSIQSKSVAPFDLIYSDVWGP 1541
            P  +    V+   ++  S   ++ FC +C VGK   +   + Q+   AP D+I++D+WGP
Sbjct: 371  PNSHVLKLVLTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLWGP 430

Query: 1542 AATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKAFQCDW 1721
            +   S  GY YYV F+D F+++TWI+PL SK +  S    F +M E QF+TKIK+ Q DW
Sbjct: 431  SHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDW 490

Query: 1722 RGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLRFWWDA 1901
             GEYR  +S   ++GI+ R  CPHTH QNG+ ERKH+HIV++GLTLL HA LPL+FW  A
Sbjct: 491  GGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFA 550

Query: 1902 FSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQFRSSK 2081
            F+T+ YLIN LP+  L+   PF  LFN+ PDY FL+ FGCACFP+LRPY +HKL FRS +
Sbjct: 551  FTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQE 610

Query: 2082 CIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
            C+FLGYS+ HKGYKCL  SGRIYI++ V FNE  FPYT L
Sbjct: 611  CVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDL 650



 Score =  150 bits (378), Expect = 3e-33
 Identities = 71/135 (52%), Positives = 95/135 (70%)
 Frame = +3

Query: 2406 NHSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTW 2585
            NH M TRSK+G + P+       A S   EP +V QAL+DP W +AM  E+NAL+ NHTW
Sbjct: 738  NHPMQTRSKSGFHNPRIHPSLFLAHS---EPKTVKQALADPNWFSAMQQEYNALMLNHTW 794

Query: 2586 DLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLT 2765
            DLV   +D   +  KWVF+VK  ADGS+++LKARLVA+GF Q+ G D+ ETFSPV+KP+T
Sbjct: 795  DLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPIT 854

Query: 2766 IRIMFSLVVTRGWSI 2810
            IRI+ +L +T  W++
Sbjct: 855  IRIILTLALTNNWNL 869



 Score = 97.4 bits (241), Expect = 6e-17
 Identities = 77/279 (27%), Positives = 122/279 (43%)
 Frame = +2

Query: 344  LFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKKGDLSVD 523
            L +WL S++S+S+L  V    +S Q+W  + + F + +KAR   LR  L++T     S+ 
Sbjct: 2    LLTWLQSTLSKSILSRVIGSVHSYQVWDKVHEYFHTQTKARARQLRTDLRSTTLDGQSMR 61

Query: 524  DYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQEVQFSL 703
            D++ +++ IAD L      +S ++ +  +L GL  E+  VV  + ++  +  + EV+  L
Sbjct: 62   DFLTQIKTIADELAGVGSPVSLEEYVDAVLEGLPQEYAPVVSVIESKFVTPPIAEVEALL 121

Query: 704  QSHEMRIXXXXXXXXXXXXXVHVAQRRFNNSENISPXXXXXXXXXXXXXXXXXXPACQIC 883
             +HE R                    R + S   S                     CQIC
Sbjct: 122  LAHESRANRFRKQSFSPSINYTQGYSRGSVSGGHSGRRGGRGSGRGRGGRFANF-QCQIC 180

Query: 884  GKTNHLASKCFKRFDVSFVGLDAPSQFNPQAHLSEVSQYSPSLPQAMTASLPQAVNVTSY 1063
             K  H A+ CF R DV++                   Q + SL  AM A+       TS 
Sbjct: 181  FKYGHTANVCFYRADVNY-------------------QPAESLVLAMVAN-------TSQ 214

Query: 1064 PATDNSWYVDSGASAHVTSELGNLSLKSPYHGSDKLTVG 1180
            P  ++SW  DSGAS HVT E  N+     + G D++ +G
Sbjct: 215  PGANSSWIPDSGASFHVTGEPQNIHQLEHFDGPDQIFIG 253


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  332 bits (851), Expect = 2e-93
 Identities = 168/340 (49%), Positives = 222/340 (65%), Gaps = 2/340 (0%)
 Frame = +3

Query: 1188 TNQILLKGALKG-GLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRLGH 1364
            TN++LL+G +   GLY     HL   V             K  +V S+S++  WH RLGH
Sbjct: 400  TNEVLLQGVVGADGLYSFP--HLKLQV------LDSFNFNKNSDVSSSSTM--WHTRLGH 449

Query: 1365 PCINTFASVMKHLHIPFSCNKLS-FCEACKVGKLHSISFPSIQSKSVAPFDLIYSDVWGP 1541
            P  +    V+   ++  S   ++ FC +C VGK   +   + Q+   AP D+I++D+WGP
Sbjct: 450  PNSHVLKLVLTQCNLLSSNTHVTEFCSSCCVGKSRRLPSSASQTIYSAPLDVIFTDLWGP 509

Query: 1542 AATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKAFQCDW 1721
            +   S  GY YYV F+D F+++TWI+PL SK +  S    F +M E QF+TKIK+ Q DW
Sbjct: 510  SHITSFSGYLYYVAFIDAFSKYTWIYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDW 569

Query: 1722 RGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLRFWWDA 1901
             GEYR  +S   ++GI+ R  CPHTH QNG+ ERKH+HIV++GLTLL HA LPL+FW  A
Sbjct: 570  GGEYRAFTSFLATNGIQHRVICPHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFA 629

Query: 1902 FSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQFRSSK 2081
            F+T+ YLIN LP+  L+   PF  LFN+ PDY FL+ FGCACFP+LRPY +HKL FRS +
Sbjct: 630  FTTAVYLINRLPSAALNFNVPFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQE 689

Query: 2082 CIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
            C+FLGYS+ HKGYKCL  SGRIYI++ V FNE  FPYT L
Sbjct: 690  CVFLGYSNSHKGYKCLSSSGRIYISKDVIFNEHRFPYTDL 729



 Score =  150 bits (378), Expect = 3e-33
 Identities = 71/135 (52%), Positives = 95/135 (70%)
 Frame = +3

Query: 2406 NHSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTW 2585
            NH M TRSK+G + P+       A S   EP +V QAL+DP W +AM  E+NAL+ NHTW
Sbjct: 817  NHPMQTRSKSGFHNPRIHPSLFLAHS---EPKTVKQALADPNWFSAMQQEYNALMLNHTW 873

Query: 2586 DLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLT 2765
            DLV   +D   +  KWVF+VK  ADGS+++LKARLVA+GF Q+ G D+ ETFSPV+KP+T
Sbjct: 874  DLVSLPSDRKAVGCKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPIT 933

Query: 2766 IRIMFSLVVTRGWSI 2810
            IRI+ +L +T  W++
Sbjct: 934  IRIILTLALTNNWNL 948



 Score =  135 bits (339), Expect = 1e-28
 Identities = 95/344 (27%), Positives = 155/344 (45%)
 Frame = +2

Query: 149  TITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAPSQFLQGTSSSAPTINPEYQVWI 328
            +I  +LD SNY +WR Q+   +++H    F++     P ++L      +  +NP Y+ W 
Sbjct: 17   SIAEKLDDSNYLHWRQQIEPVIKSHKLQRFVVNPQIPP-RYLTDADRDSDIVNPAYETWE 75

Query: 329  RRDSYLFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKKG 508
             +D  L +WL S++S+S+L  V    +S Q+W  + + F + +KAR   LR  L++T   
Sbjct: 76   VQDQMLLTWLQSTLSKSILSRVIGSVHSYQVWDKVHEYFHTQTKARARQLRTDLRSTTLD 135

Query: 509  DLSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQE 688
              S+ D++ +++ IAD L      +S ++ +  +L GL  E+  VV  + ++  +  + E
Sbjct: 136  GQSMRDFLTQIKTIADELAGVGSPVSLEEYVDAVLEGLPQEYAPVVSVIESKFVTPPIAE 195

Query: 689  VQFSLQSHEMRIXXXXXXXXXXXXXVHVAQRRFNNSENISPXXXXXXXXXXXXXXXXXXP 868
            V+  L +HE R                    R + S   S                    
Sbjct: 196  VEALLLAHESRANRFRKQSFSPSINYTQGYSRGSVSGGHSGRRGGRGSGRGRGGRFANF- 254

Query: 869  ACQICGKTNHLASKCFKRFDVSFVGLDAPSQFNPQAHLSEVSQYSPSLPQAMTASLPQAV 1048
             CQIC K  H A+ CF R DV++                   Q + SL  AM A+     
Sbjct: 255  QCQICFKYGHTANVCFYRADVNY-------------------QPAESLVLAMVAN----- 290

Query: 1049 NVTSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGSDKLTVG 1180
              TS P  ++SW  DSGAS HVT E  N+     + G D++ +G
Sbjct: 291  --TSQPGANSSWIPDSGASFHVTGEPQNIHQLEHFDGPDQIFIG 332


>gb|KYP40244.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 720

 Score =  319 bits (817), Expect = 6e-93
 Identities = 150/293 (51%), Positives = 198/293 (67%), Gaps = 1/293 (0%)
 Frame = +3

Query: 1326 TSSLDVWHQRLGHPCINTFASVMKHLHI-PFSCNKLSFCEACKVGKLHSISFPSIQSKSV 1502
            +SS  +WH RLGHP  +    V+   ++ P +     FC +C VGK H +   + Q+   
Sbjct: 427  SSSSTMWHTRLGHPNSHVLKLVLTQCNLLPSNTYVTEFCSSCYVGKSHRLPSSASQTVYS 486

Query: 1503 APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVER 1682
            AP DLI++D+WGP+   S  GY YYV F+D F+++TW++PL SK +  S    F +M E 
Sbjct: 487  APLDLIFTDLWGPSHITSFSGYIYYVAFIDAFSKYTWVYPLKSKAETLSVFQQFKAMAEL 546

Query: 1683 QFSTKIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLL 1862
            QF+TKIK+ Q DW G Y+  +S   ++GI+ R  CPHTH QNG+ ERKH+HIV++GLTLL
Sbjct: 547  QFNTKIKSVQSDWGGVYQAFTSFLATNGIEHRLICPHTHHQNGVVERKHRHIVEIGLTLL 606

Query: 1863 SHAQLPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLR 2042
             HA LPL+FW   F+T+ YLIN  P+  L+   PF  LFN+ PDY FL+ FGCACFP+LR
Sbjct: 607  HHASLPLQFWDFTFTTAIYLINRFPSAALNFDVPFTVLFNKSPDYKFLRTFGCACFPFLR 666

Query: 2043 PYNNHKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
            P  +HKL FRS +C+FLGYS+ HKGYKCL  S RIYI++ V FNE  FPYT L
Sbjct: 667  PCASHKLHFRSQECVFLGYSNSHKGYKCLSSSSRIYISKDVIFNEHRFPYTDL 719



 Score =  123 bits (308), Expect = 3e-25
 Identities = 88/351 (25%), Positives = 151/351 (43%), Gaps = 7/351 (1%)
 Frame = +2

Query: 149  TITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAPSQFLQGTSSSAPTINPEYQVWI 328
            +I  +LD SNY +WR Q+   +++H    F++     P ++L         +NP Y+ W 
Sbjct: 17   SIAEKLDDSNYLHWRQQIKPIIKSHKLQRFVVNPQIPP-RYLTDADRDYDIVNPAYETWE 75

Query: 329  RRDSYLFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIMHLRLLLQTTKKG 508
             +D  L +WL S +S+++L  V    +S Q+W  + + F + +KAR   LR  L++T   
Sbjct: 76   VQDQMLLTWLQSMLSKTILSRVIGSVHSYQVWDKVHEYFHTQTKARARQLRTDLRSTTLD 135

Query: 509  DLSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVNLTNRSDSLTLQE 688
              S+ D++ +++ IAD L      +S ++ +  +L GL  E+  VV  + ++  +  + E
Sbjct: 136  GKSMRDFLTQIKNIADQLAGVGSPMSLEEYVDVVLEGLPQEYTPVVSVIESKFVTPPIAE 195

Query: 689  VQFSLQSHEMRIXXXXXXXXXXXXXV-------HVAQRRFNNSENISPXXXXXXXXXXXX 847
            V+  L +HE R+                      ++   F + +                
Sbjct: 196  VEALLLAHESRVNRFRKQSFSPSINYTQGYSRGSISGESFRDRDGGHSGCRGGQGSGRGR 255

Query: 848  XXXXXXPACQICGKTNHLASKCFKRFDVSFVGLDAPSQFNPQAHLSEVSQYSPSLPQAMT 1027
                    CQ C K  H A+ CF R DV++                   Q    L  AM 
Sbjct: 256  GGRFANFHCQNCFKYGHTANVCFYRADVNY-------------------QLVEFLVLAMV 296

Query: 1028 ASLPQAVNVTSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGSDKLTVG 1180
            A+       TS    ++SW  DSGAS H+T E  N+     + G D++ +G
Sbjct: 297  AN-------TSQAGANSSWIPDSGASFHITGEPQNIHQLEHFDGLDQIFIG 340


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 839

 Score =  320 bits (821), Expect = 2e-92
 Identities = 161/301 (53%), Positives = 200/301 (66%), Gaps = 5/301 (1%)
 Frame = +3

Query: 1314 NVVSTSSLD--VWHQRLGHPCINTFASVMKHLHIPFSCNKLS-FCEACKVGKLHSISFPS 1484
            + VS+ S+    WH RLGHP  +   SV K  + P     +S FC +C +GK H +  PS
Sbjct: 140  HTVSSQSVSYATWHSRLGHPHNDVLKSVFKLCNFPNINKSVSDFCTSCCLGKSHKL--PS 197

Query: 1485 IQSKSV--APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVL 1658
              SK+V   PF+LIYSD+WGPA   S +GY+YYV F+D  TRFTWIF L SK        
Sbjct: 198  QLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVTFVDAHTRFTWIFMLKSKAHTLDVFK 257

Query: 1659 NFISMVERQFSTKIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHI 1838
             F +MV  QF   IKA Q DW GE+R  +S     GI  R  CPHTH QNG+ ERKH+HI
Sbjct: 258  QFHAMVRNQFQLPIKAIQTDWGGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVERKHRHI 317

Query: 1839 VDLGLTLLSHAQLPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFG 2018
            V+LGLTLL+ A LP+ FW  AF TS YLIN LP+  +    PF+KLF+ +PDY+FL+ FG
Sbjct: 318  VELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPFRKLFHHLPDYNFLRVFG 377

Query: 2019 CACFPYLRPYNNHKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQ 2198
            C+CFP+LRPYN  KLQFRS +C+FLGYS+ HKGYKCL PSGR++I++ V F E  FPY  
Sbjct: 378  CSCFPHLRPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRVFISKDVIFCENRFPYPT 437

Query: 2199 L 2201
            L
Sbjct: 438  L 438



 Score =  130 bits (326), Expect = 3e-27
 Identities = 68/135 (50%), Positives = 86/135 (63%)
 Frame = +3

Query: 2409 HSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTWD 2588
            H M TR+K GI KP+   L  +      EP +  QAL+   W AAM  E+NAL+ N TW 
Sbjct: 512  HPMTTRAKAGIVKPR---LQPTLLLTHFEPKNTKQALASDTWLAAMKQEYNALMANGTWT 568

Query: 2589 LVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTI 2768
            LVP  +    I  KWVF++K   DG+V + KARLVA+GF Q  G DY ETFSPVVKP+TI
Sbjct: 569  LVPLPSHRTAIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQFGFDYTETFSPVVKPVTI 628

Query: 2769 RIMFSLVVTRGWSIQ 2813
            R++ +L +T  WSIQ
Sbjct: 629  RLILTLALTHHWSIQ 643


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  329 bits (843), Expect = 4e-92
 Identities = 161/342 (47%), Positives = 218/342 (63%), Gaps = 4/342 (1%)
 Frame = +3

Query: 1188 TNQILLKGAL-KGGLYQLDLSHLSAPVKXXXXXXXXXXXXKQCNVVSTSSLDVWHQRLGH 1364
            TN++LL+G++   GLY+      +   +                  S  S   WH RLGH
Sbjct: 448  TNEVLLQGSVGSDGLYKFPALLPNPSTQSVQQQQLARIFSVNTAATSPVSFATWHSRLGH 507

Query: 1365 PCINTFASVMKHLHIPF-SCNKLSFCEACKVGKLHSISFPSIQSKSV--APFDLIYSDVW 1535
            P ++    V ++ +I   S NK +FC  C +GK H +  PS  S+++   PFDL+YSD+W
Sbjct: 508  PNVDVMKHVSRNYNIQLVSNNKSNFCTPCCLGKSHRL--PSNLSRTIYNTPFDLVYSDLW 565

Query: 1536 GPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVLNFISMVERQFSTKIKAFQC 1715
            GPA   S  GY+YYV F+D  TRFTWI+ L SK   ++    F +MV+ Q+   IKA Q 
Sbjct: 566  GPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQT 625

Query: 1716 DWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHIVDLGLTLLSHAQLPLRFWW 1895
            DW GEYR  ++     GI+ R  CPHTH QNG+ ERKH+HIV+LGLTL++ A+LP++FW 
Sbjct: 626  DWGGEYRSFTTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWD 685

Query: 1896 DAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFGCACFPYLRPYNNHKLQFRS 2075
             +F T+ YLIN LP+  + N  P+ KLF++ PDY  L+ FGC+CFP+LRPYN HKLQFRS
Sbjct: 686  HSFLTAVYLINRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRS 745

Query: 2076 SKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQL 2201
             +C+FLGYS+ HKGYKCL   GR+YI++ V FNE +FPY  L
Sbjct: 746  QECVFLGYSTSHKGYKCLAADGRLYISKDVVFNETKFPYKDL 787



 Score =  146 bits (369), Expect = 3e-32
 Identities = 72/142 (50%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
 Frame = +3

Query: 2394 VIHPN--HSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNAL 2567
            +IHP+  H M TR+K+GI KP+   L  +     +EP +  QALS+P W AAM  E+NAL
Sbjct: 863  IIHPHNVHPMTTRAKDGIVKPR---LQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNAL 919

Query: 2568 IHNHTWDLVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSP 2747
            +HN+TW LVP       I  KWVF+VK   +GSV++ KARLVA+GF Q  G DY ETFSP
Sbjct: 920  LHNNTWSLVPLPPHRTAIGCKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSP 979

Query: 2748 VVKPLTIRIMFSLVVTRGWSIQ 2813
            V+KP+T+R++ +L +T  W IQ
Sbjct: 980  VIKPVTVRLILTLALTHRWPIQ 1001



 Score =  132 bits (331), Expect = 1e-27
 Identities = 105/365 (28%), Positives = 159/365 (43%), Gaps = 12/365 (3%)
 Frame = +2

Query: 122  PAFSLPTFT---TITLRLDRSNYSYWRSQVLATVRAHGFDGFLLGTSTAPSQFLQGTSSS 292
            P+ S P+ T   TI+ +LD  NY  W  QV   ++ H    +L+     P +F       
Sbjct: 27   PSNSHPSLTFSHTISEKLDTKNYLLWCQQVEPVIKGHRLHHYLVNPQI-PQKFATLADRD 85

Query: 293  APTINPEYQVWIRRDSYLFSWLLSSISESMLGHVNRCSNSAQIWSVLEKLFQSSSKARIM 472
            A  I+  Y  W ++D  L SWL SS+S+ ML  V  C +S Q+W  +   F S   A+  
Sbjct: 86   AGHISESYLAWEQQDQLLLSWLQSSMSKDMLTRVIGCKSSFQLWDKIHTYFHSHMNAKAR 145

Query: 473  HLRLLLQTTKKGDLSVDDYVLKMRGIADTLLAADQEISDDDLILYILAGLGPEFESVVVN 652
             LR  L++T   +LS+ +YVL+++ + D L A    +S  + +  IL GL  E+ES V  
Sbjct: 146  QLRNELRSTTLDNLSISEYVLRIQTLVDALTAIGDSVSPKEHLDIILEGLPEEYESTVSL 205

Query: 653  LTNRSDSLTLQEVQFSLQSHEMRIXXXXXXXXXXXXXVHVAQRRFNNSENISPXXXXXXX 832
            +++R D LT+ EV+  L  HE R+                      ++ N          
Sbjct: 206  ISSRFDLLTIDEVETLLLGHESRLDKFKKKAAASINVTTAVTEPDPSATN--------PQ 257

Query: 833  XXXXXXXXXXXPACQICGKTNHLA---SKCFKRFDVSFVGLDAPSQFNPQAHLSEVSQYS 1003
                       P+ +  G+TN      S    R    F G       +   H++    Y 
Sbjct: 258  AHLTHQNNQSGPSHRRGGRTNSRGGRFSNWAGRGRGRFAGYQC-QVCHRYGHVASACYYR 316

Query: 1004 ------PSLPQAMTASLPQAVNVTSYPATDNSWYVDSGASAHVTSELGNLSLKSPYHGSD 1165
                  PS P    A  P     T+  A +N+WY DSGAS HVT+   N+   +P+ G D
Sbjct: 317  FDETYVPSSPLEAPA-YPSNNQHTNPGACNNNWYPDSGASNHVTNVSQNIHQFTPFEGPD 375

Query: 1166 KLTVG 1180
            ++ VG
Sbjct: 376  QIHVG 380


>gb|KYP34577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 661

 Score =  311 bits (797), Expect = 1e-90
 Identities = 158/301 (52%), Positives = 199/301 (66%), Gaps = 5/301 (1%)
 Frame = +3

Query: 1314 NVVSTSSLD--VWHQRLGHPCINTFASVMKHLHIPFSCNKLS-FCEACKVGKLHSISFPS 1484
            + VS++S+    WH RLGH   +   SV K  + P     +S FC +C +GK H +  PS
Sbjct: 105  HTVSSNSVSYATWHSRLGHAHNDVIKSVFKLCNFPIINKSVSDFCTSCCLGKSHKL--PS 162

Query: 1485 IQSKSV--APFDLIYSDVWGPAATPSCDGYKYYVHFLDEFTRFTWIFPLVSKCDVYSTVL 1658
              SK+V   PF+LIYSD+WGPA   S +GY+YYV  +D  TRFTWIF L SK        
Sbjct: 163  QLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVTLVDAHTRFTWIFLLKSKAHTLDVFK 222

Query: 1659 NFISMVERQFSTKIKAFQCDWRGEYRKLSSQFQSSGIKFRHPCPHTHTQNGMPERKHQHI 1838
             F +MV+ QF   IKA Q DW GE+R  +S     GI  R  CPHTH QNG+ E KH+HI
Sbjct: 223  QFHAMVQNQFQLPIKAIQTDWGGEFRSFTSYLAQHGIHHRIICPHTHHQNGVVECKHRHI 282

Query: 1839 VDLGLTLLSHAQLPLRFWWDAFSTSTYLINLLPTPVLHNLSPFQKLFNRIPDYSFLKAFG 2018
            V+LGLTLL+ AQL + FW  AF TS YLIN LP+  +    PFQKLF+++PDY+FL+ FG
Sbjct: 283  VELGLTLLAQAQLSMSFWDYAFLTSVYLINRLPSSSIQQDVPFQKLFHQLPDYNFLRVFG 342

Query: 2019 CACFPYLRPYNNHKLQFRSSKCIFLGYSSQHKGYKCLHPSGRIYIARTVAFNECEFPYTQ 2198
            C+CFP+L PYN  KLQFRS +C+FLGYS+ HKGYKCL PSGRI+I++ V F E  FPY  
Sbjct: 343  CSCFPHLWPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRIFISKDVIFCENHFPYPS 402

Query: 2199 L 2201
            +
Sbjct: 403  M 403



 Score =  121 bits (304), Expect = 7e-25
 Identities = 66/135 (48%), Positives = 85/135 (62%)
 Frame = +3

Query: 2409 HSMVTRSKNGIYKPKAFVLSSSASSHVIEPSSVSQALSDPGWKAAMDLEFNALIHNHTWD 2588
            H M TR+K GI KP+   L  +      EP S  QAL+   W AAM  +++AL+ N TW 
Sbjct: 477  HPMTTRAKAGIAKPR---LQPTLLLTHFEPKSTKQALASDTWLAAMKQKYDALMANGTWT 533

Query: 2589 LVPPSADMNLISNKWVFKVKHRADGSVERLKARLVARGFQQIPGLDYFETFSPVVKPLTI 2768
            LV   +    I  KWVF++K   DG+V + KARLVA+GF Q  G DY ETFS VVKP+TI
Sbjct: 534  LVSLPSHRTTIGCKWVFRIKENPDGTVHKHKARLVAKGFHQQFGFDYTETFSLVVKPVTI 593

Query: 2769 RIMFSLVVTRGWSIQ 2813
            R++ +LV+T  WSIQ
Sbjct: 594  RLIHTLVLTHHWSIQ 608