BLASTX nr result

ID: Rehmannia28_contig00023675 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00023675
         (578 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006576521.1| coat protein [Amazon lily mild mottle virus]...   106   2e-25
ref|YP_009104377.1| putative coat protein [Cassava Ivorian bacil...   106   2e-25

>ref|YP_006576521.1| coat protein [Amazon lily mild mottle virus]
           gi|398650497|dbj|BAM34546.1| coat protein [Amazon lily
           mild mottle virus]
          Length = 204

 Score =  106 bits (264), Expect = 2e-25
 Identities = 51/58 (87%), Positives = 55/58 (94%)
 Frame = -3

Query: 576 FLTMNGTSRTRHVVIPFANRTVADLSQQRVWLGARTGTVTADNLVVGLVRVFIEHRPI 403
           FLTM  TSRTRHVV+PF NRTVADL+QQRVWLGARTGTVTA++LVVGLVRVFIEHRPI
Sbjct: 139 FLTMRETSRTRHVVVPFVNRTVADLAQQRVWLGARTGTVTAESLVVGLVRVFIEHRPI 196


>ref|YP_009104377.1| putative coat protein [Cassava Ivorian bacilliform virus]
           gi|586908848|gb|AHJ89008.1| putative coat protein
           [Cassava Ivorian bacilliform virus]
          Length = 205

 Score =  106 bits (264), Expect = 2e-25
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = -3

Query: 576 FLTMNGTSRTRHVVIPFANRTVADLSQQRVWLGARTGTVTADNLVVGLVRVFIEHRPI 403
           FLTM  TSR RHVVIPFA RTVADL+QQRVWLGARTGTVTADNLVVGLVR+FIEHRPI
Sbjct: 140 FLTMRETSRNRHVVIPFAGRTVADLAQQRVWLGARTGTVTADNLVVGLVRLFIEHRPI 197


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