BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00023658
         (665 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposo...    92   6e-18
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...    91   1e-17
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...    90   2e-17
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    90   3e-17
gb|KYP66330.1| Transposon Ty2-C Gag-Pol polyprotein [Cajanus cajan]    87   6e-17
gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposo...    86   4e-16
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...    86   5e-16
gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposo...    84   3e-15
ref|XP_013731927.1| PREDICTED: uncharacterized protein LOC106435...    83   5e-15
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...    82   1e-14
gb|KYP52269.1| Retrovirus-related Pol polyprotein from transposo...    80   4e-14
gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposo...    80   5e-14
gb|KYP34400.1| Retrovirus-related Pol polyprotein from transposo...    80   6e-14
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    80   7e-14
gb|KYP57632.1| hypothetical protein KK1_003897 [Cajanus cajan]         80   9e-14
gb|KYP44418.1| Retrovirus-related Pol polyprotein from transposo...    79   1e-13
gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposo...    79   1e-13
ref|XP_012472262.1| PREDICTED: uncharacterized protein LOC105789...    79   1e-13
gb|KYP51540.1| hypothetical protein KK1_026567 [Cajanus cajan] g...    76   2e-13
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    77   6e-13

>gb|KYP38888.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 546

 Score = 91.7 bits (226), Expect = 6e-18
 Identities = 58/167 (34%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSK-GLYRL*LHQXXX 347
           VP ITKN++S+SQ  KDN VF EF+ ++C V  Q S   LL GV+   GLY+        
Sbjct: 360 VPTITKNMISVSQFCKDNSVFFEFHSNFCLVKSQDSNETLLHGVVGPDGLYQF------- 412

Query: 348 XXXXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEFLSV 527
                         + PA                 WH RLGH              F  +
Sbjct: 413 -------PSLLLPRQPPAVLPFVHTVSSNSVSYATWHSRLGHAHNDVIKSVFKLCNFPII 465

Query: 528 ---ASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
               S FC +C +GKS       S TV   P E+I+SD+WGPAP+LS
Sbjct: 466 NKSVSDFCTSCCLGKSHKLPSHLSKTVYHTPFELIYSDLWGPAPVLS 512


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score = 91.3 bits (225), Expect = 1e-17
 Identities = 59/169 (34%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKGLYRL*LHQXXXX 350
           VPKITKNLLSIS+LT DN ++VEF+   C V D+ + R LL G +  GLY+L        
Sbjct: 295 VPKITKNLLSISKLTFDNDIYVEFHDVACFVKDKLTGRILLEGKIKDGLYQL-------- 346

Query: 351 XXXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEFLSVA 530
                       +K+P  F               WH +LGH             +  ++ 
Sbjct: 347 -----PGGSTSTNKRPHVF---------FSIKETWHRKLGH---PNSKVLNEVMKLCNIE 389

Query: 531 SS------FCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
           +S      FC AC  GK+ +     S++   +PL+++HSDVWGPAPI S
Sbjct: 390 ASPCENFEFCEACQFGKAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISS 438


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 785

 Score = 90.1 bits (222), Expect = 2e-17
 Identities = 61/167 (36%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLS-KGLYRL*LHQXXX 347
           VP ITKNL+S+SQ  KDN VF EF+   C V  Q +K  LL GV+   GLY+        
Sbjct: 324 VPNITKNLISVSQFCKDNSVFFEFHSTCCLVKSQDTKDTLLMGVVGPDGLYQF------- 376

Query: 348 XXXXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEFLSV 527
                         +QPA                 WH RLGH              F  +
Sbjct: 377 -------PSLLQPRQQPAITPSANTASCHSVPYVTWHSRLGHPHNDVIKSVFRLCNFPII 429

Query: 528 ---ASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
              AS FC  C +GKS     + S TV   P E+I+SD+WGPAPI S
Sbjct: 430 NKTASDFCTPCCLGKSHKLPSNSSKTVYHTPFELIYSDLWGPAPITS 476


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 89.7 bits (221), Expect = 3e-17
 Identities = 59/170 (34%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKGLYRL*LHQXXXX 350
           VP ITKNLLS+S+  KDN VF EF+ D C V DQ ++  L+ G +  GLY          
Sbjct: 433 VPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLYAF-------D 485

Query: 351 XXXXXXXXXXCVSKQP----AQFQXXXXXXXXXXXXXXWHMRLGH---LXXXXXXXXXXX 509
                      +SK P    + F               WH RLGH               
Sbjct: 486 SSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAATIKNVLSKCNV 545

Query: 510 XEFLSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
                + S+FC++C +GK      S S T  TKPLE+IH D+WGP  +LS
Sbjct: 546 AHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLS 595


>gb|KYP66330.1| Transposon Ty2-C Gag-Pol polyprotein [Cajanus cajan]
          Length = 287

 Score = 86.7 bits (213), Expect = 6e-17
 Identities = 58/167 (34%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSK-GLYRL*LHQXXX 347
           VP I KNL+S+SQ  K N VF EF+  +CSV  Q S   LL GV+   GLY+        
Sbjct: 76  VPTIIKNLISVSQFCKYNSVFFEFHSTFCSVKSQDSNETLLHGVVGPDGLYQF------- 128

Query: 348 XXXXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEFLSV 527
                         + PA                 WH RLGH              F  +
Sbjct: 129 -------PSLLLPRQPPAVLPSSHTVSSNSVSYATWHSRLGHAHNDVIKSVFKLCNFPII 181

Query: 528 ---ASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
               S FC +C  GKS       S TV   P E+I+SD+WGPAP+LS
Sbjct: 182 NKSVSDFCTSCCPGKSHKLPSQLSKTVYHTPFELIYSDLWGPAPVLS 228


>gb|KYP53212.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 533

 Score = 86.3 bits (212), Expect = 4e-16
 Identities = 65/214 (30%), Positives = 88/214 (41%), Gaps = 4/214 (1%)
 Frame = +3

Query: 36  TKSNTKGINHLLIGNEQSLFIXXXXXXXXXXXXXXXXXXXXXXXCVPKITKNLLSISQLT 215
           +K++  G + + +GN Q++ I                        VP ITKNLLS+S+  
Sbjct: 215 SKTDYTGQDKIHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFC 274

Query: 216 KDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKGLYRL*LHQXXXXXXXXXXXXXXCVSKQ 395
           KDN V+VEF+ +YC V  Q SK  LLRG L  GLY     Q                ++ 
Sbjct: 275 KDNNVYVEFHTNYCLVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSVPTNRT 334

Query: 396 PAQFQXXXXXXXXXXXXXXWHMRLGH----LXXXXXXXXXXXXEFLSVASSFCNACHIGK 563
               Q              WH RL H    +                  S  C +C IGK
Sbjct: 335 TLYVQ------RTRKSYDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGK 388

Query: 564 SKHKHDSPSLTVTTKPLEIIHSDVWGPAPILSKD 665
           S     S S TV   PLE+++SDVWGP+   S++
Sbjct: 389 SHTLPFSDSYTVYNSPLELVYSDVWGPSHYASRE 422


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1403

 Score = 86.3 bits (212), Expect = 5e-16
 Identities = 65/214 (30%), Positives = 88/214 (41%), Gaps = 4/214 (1%)
 Frame = +3

Query: 36  TKSNTKGINHLLIGNEQSLFIXXXXXXXXXXXXXXXXXXXXXXXCVPKITKNLLSISQLT 215
           +K++  G + + +GN Q++ I                        VP ITKNLLS+S+  
Sbjct: 349 SKTDYTGQDKIHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFC 408

Query: 216 KDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKGLYRL*LHQXXXXXXXXXXXXXXCVSKQ 395
           KDN V+VEF+ +YC V  Q SK  LLRG L  GLY     Q                ++ 
Sbjct: 409 KDNNVYVEFHTNYCLVKSQDSKETLLRGNLKNGLYVFDEVQILKPDVYEHTVDSVPTNRT 468

Query: 396 PAQFQXXXXXXXXXXXXXXWHMRLGH----LXXXXXXXXXXXXEFLSVASSFCNACHIGK 563
               Q              WH RL H    +                  S  C +C IGK
Sbjct: 469 TLYVQ------RTRKSYDVWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGK 522

Query: 564 SKHKHDSPSLTVTTKPLEIIHSDVWGPAPILSKD 665
           S     S S TV   PLE+++SDVWGP+   S++
Sbjct: 523 SHTLPFSDSYTVYNSPLELVYSDVWGPSHYASRE 556


>gb|KYP34307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1102

 Score = 84.0 bits (206), Expect = 3e-15
 Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLS-KGLYRL*LHQXXX 347
           VP ITKNL+S+SQ +KDN V+ EF+   C V  Q +K  LL+G++   GLY+        
Sbjct: 459 VPSITKNLISVSQFSKDNSVYFEFHPYICLVKSQDTKEVLLQGLVGPDGLYQF------- 511

Query: 348 XXXXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEFLSV 527
                          QPA+                WH RLGH                 V
Sbjct: 512 PTLLPTPSPQSVQQVQPARTFSVNTATKSSISFATWHSRLGHPNVDVMKHVSRNFNIQLV 571

Query: 528 A---SSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
               S+FC  C +GKS     + S T+   P +++++D+WGPAP+ S
Sbjct: 572 TNNKSNFCTPCCLGKSHRLPSNLSKTIYNTPFDLVYNDLWGPAPVTS 618


>ref|XP_013731927.1| PREDICTED: uncharacterized protein LOC106435564 [Brassica napus]
          Length = 606

 Score = 83.2 bits (204), Expect = 5e-15
 Identities = 55/165 (33%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
 Frame = +3

Query: 174 PKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKGLYRL*LHQXXXXX 353
           P+ITKNLLS+S+LTKD P    F  D+  V D+ +K  + +G   K LY L         
Sbjct: 453 PEITKNLLSVSKLTKDYPCEFTFDSDHVFVKDKVTKAVITQGRRLKDLYML--------- 503

Query: 354 XXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEFLSVAS 533
                        + A+FQ              WH RLGH               +S  +
Sbjct: 504 -------------KDARFQVFYSNRQQATSDEVWHQRLGHPHKDILQHLSRKNAIVSNKT 550

Query: 534 S---FCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
           S    C+AC +GKS       S TVT +PLE IH D+W P P++S
Sbjct: 551 SSKTLCDACQVGKSSRLPFLVSETVTNRPLERIHCDLWDPCPVMS 595


>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1408

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 55/169 (32%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSK-GLYRL*LHQXXX 347
           VP +TKNL+S+S+  KDN V+  F+   C V  Q     LL G L + GLY    H    
Sbjct: 406 VPSLTKNLISVSKFAKDNNVYFVFHPHSCFVKSQDLNETLLEGHLGEDGLYHFHPHLATK 465

Query: 348 XXXXXXXXXXXCVSK-QPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEF-- 518
                        SK  P  F               WH+RLGH                 
Sbjct: 466 TSSNTNIEQNLIFSKPDPCIFLSEKCNSVVPNTYKQWHLRLGHPHHDSLTRALQTCNIRL 525

Query: 519 --LSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
             ++  S FC++C I KS      PS T+ +KPLE++  DVWGPA + S
Sbjct: 526 PTVNKISDFCDSCCIAKSHRLPSHPSTTIYSKPLELVFLDVWGPASLES 574


>gb|KYP52269.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 397

 Score = 80.1 bits (196), Expect = 4e-14
 Identities = 58/171 (33%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSK-GLYRL*LHQXXX 347
           VP +TKNL+S+S+ TKDN  +  FY   C V  Q     LL G L + GLYR   H    
Sbjct: 35  VPTLTKNLISVSKFTKDNNFYFVFYPYSCFVKSQDLNETLLEGKLGEDGLYRF--HPSLA 92

Query: 348 XXXXXXXXXXX---CVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEF 518
                          VS +P  F               WH+RLGH               
Sbjct: 93  NNQSLKADIKNNSISVSSEPCIFLSEKCKNTVPSTYKQWHLRLGHPHHDALIKALKICNI 152

Query: 519 ----LSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
               ++  S F ++C I KS      PS+TV +KPLE I  DVWGPA + S
Sbjct: 153 HIPTVNKISDFGDSCCIAKSHRIPSQPSITVYSKPLEFIFLDVWGPASLES 203


>gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 904

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 54/169 (31%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKG-LYRL*LHQXXX 347
           VP +TKNL+S+S+  KDN V+  FY   C V  Q     LL G L +  LY    H    
Sbjct: 373 VPTLTKNLISVSKFAKDNNVYFVFYPHSCFVKSQDLNETLLEGKLGEDDLYHFHPHLAKK 432

Query: 348 XXXXXXXXXXXCVSKQ-PAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEF-- 518
                         K  P  F               WH+RLGH                 
Sbjct: 433 TSFNIDIEQNLAFPKSDPCIFLSEKCNHVVSNTYKQWHLRLGHPHHDSLTKALQTCNIRL 492

Query: 519 --LSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
             ++  S FC++C I KS      PS T+ +KPLE++  DVWGPA + S
Sbjct: 493 PTVNKISDFCDSCCIAKSHRLPSQPSTTIYSKPLELVFLDVWGPASLES 541


>gb|KYP34400.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 428

 Score = 79.7 bits (195), Expect = 6e-14
 Identities = 55/169 (32%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSK-GLYRL*LHQXXX 347
           VP +TKNL+S+S+  KDN V+  FY   C V  Q     LL G L + GLY    H    
Sbjct: 126 VPTLTKNLISVSKFAKDNNVYFVFYPHSCFVKSQDLNETLLEGKLGEDGLYHFHPHLVKK 185

Query: 348 XXXXXXXXXXXCVSKQ-PAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEF-- 518
                         K  P  F               WH+RLGH                 
Sbjct: 186 ESINIDIEKNSAFLKSNPCIFLFEKCNHVVSNTYKQWHLRLGHPHHDALTKALQTCNIHL 245

Query: 519 --LSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
             ++  S FC++C I KS       S TV +KPLE++  DVWGPA + S
Sbjct: 246 PTVNKISDFCDSCCIAKSHRIPSQSSTTVYSKPLELVFLDVWGPASLES 294


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 52/164 (31%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
 Frame = +3

Query: 174 PKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKGLYRL*LHQXXXXX 353
           P ITK+LLS+S+LT+D P  VEF  D   + D+ +K+ L+ G    GLY L         
Sbjct: 395 PSITKSLLSVSKLTQDYPCTVEFDSDGVRINDKATKKLLIMGSTCDGLYCL--------- 445

Query: 354 XXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEFL--SV 527
                       K  +QF+              WH RLGH                    
Sbjct: 446 ------------KDDSQFKAFFSTRQQSASDEVWHRRLGHPHPQVLQQLVKTNSISINKT 493

Query: 528 ASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
           + S C AC +GKS       S   + +PLE +H D+WGP+PI S
Sbjct: 494 SKSLCEACQLGKSTRLPFVSSSFTSNRPLERVHCDLWGPSPITS 537


>gb|KYP57632.1| hypothetical protein KK1_003897 [Cajanus cajan]
          Length = 1360

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 55/169 (32%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSK-GLYRL*LHQXXX 347
           VP +TKNL+S+S+  KDN V+  FY   C V  Q     LL G L + GLY    H    
Sbjct: 475 VPTLTKNLISVSKFAKDNNVYFVFYPHSCFVKSQDLNETLLEGKLGEDGLYHFHPHLVEK 534

Query: 348 XXXXXXXXXXXCVSKQ-PAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEF-- 518
                         K  P  F               WH+RLGH                 
Sbjct: 535 KYFNIDIEKNSTFLKSNPCIFLSEKCNHVVSNTYKQWHLRLGHPHHDSLTKALQTCNIHL 594

Query: 519 --LSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
             ++  S FC++C I KS       S TV +KPLE++  DVWGPA + S
Sbjct: 595 PTVNKISDFCDSCCIAKSHRLPSQSSTTVYSKPLELVFLDVWGPASLES 643


>gb|KYP44418.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 463

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 55/171 (32%), Positives = 72/171 (42%), Gaps = 8/171 (4%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSK-GLYRL*LH---Q 338
           VP +TKNL+S+S+  KDN V+  F    C V  Q   + LL G L + GLYR   H    
Sbjct: 148 VPNLTKNLMSVSKFAKDNYVYFVFTPHSCFVKSQDLNKTLLEGKLGEDGLYRF--HPSLM 205

Query: 339 XXXXXXXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEF 518
                          V  +P  F               WH+RLGH               
Sbjct: 206 KNEIIKVAHKKNSISVLSEPCTFLSTTCTNTVPSAYRQWHLRLGHPHHDALTKALKICNI 265

Query: 519 ----LSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
               ++  S FC++C I KS      PS  V +KPLE++  DVWGPA + S
Sbjct: 266 HIPTVNKISDFCDSCCIAKSHRLPSQPSFYVYSKPLELVFLDVWGPASLES 316


>gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 653

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 55/167 (32%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRG-VLSKGLYRL*LHQXXX 347
           VP ITKNL+S+SQ +KDN V+ EF+   C V  Q +K  LL+G V   GLY+        
Sbjct: 285 VPSITKNLISVSQFSKDNSVYFEFHPYICLVKSQDTKEVLLQGSVGPDGLYQF------- 337

Query: 348 XXXXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXXXEFLSV 527
                          QPA+                WH RLGH                 V
Sbjct: 338 PALLPTPSTQSVQQVQPARSFSVNTTAKSYVSFATWHSRLGHPNVDVMKHVSRNFNIQLV 397

Query: 528 A---SSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
               S FC  C +GKS     + S TV   P ++++SD+ GPAP+ S
Sbjct: 398 TNNKSDFCTPCCLGKSHRLPSNLSKTVYNTPFDLVYSDLCGPAPVTS 444


>ref|XP_012472262.1| PREDICTED: uncharacterized protein LOC105789428 [Gossypium
           raimondii]
          Length = 668

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 54/171 (31%), Positives = 75/171 (43%), Gaps = 9/171 (5%)
 Frame = +3

Query: 174 PKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKGLYRL*LHQXXXXX 353
           P +TKNLLS+S+ T+DN V  EF    C V D  ++  LLRG +  GLY+  LH      
Sbjct: 337 PDVTKNLLSVSKFTRDNQVMFEFLPSQCQVRDLRTREILLRGSVQHGLYK--LHLNDGLR 394

Query: 354 XXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGH---------LXXXXXXXXXX 506
                    C + + A                 WH +LGH         L          
Sbjct: 395 KFQTMPTAHCFTAKSA------------TPLRVWHSKLGHPCKNVLLKSLQHCNLAFDVN 442

Query: 507 XXEFLSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPAPILS 659
             EF+ V      ACH+GK   +  SPS +  + PL+++ +DVWGPA + S
Sbjct: 443 KDEFVYV------ACHLGKEHKQPFSPSTSQYSVPLQLVVADVWGPALVTS 487


>gb|KYP51540.1| hypothetical protein KK1_026567 [Cajanus cajan]
           gi|1012340350|gb|KYP51568.1| hypothetical protein
           KK1_026596 [Cajanus cajan]
          Length = 229

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 58/165 (35%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLS-KGLYRL*LHQXXX 347
           VP ITKNL+S+SQ +KDN VF EF+   C V  Q +K  LL+G +S  GLY+        
Sbjct: 78  VPSITKNLISVSQFSKDNSVFFEFHPSVCLVKSQDTKEILLQGSVSPDGLYQF------- 130

Query: 348 XXXXXXXXXXXCVSKQPAQ-FQ-----XXXXXXXXXXXXXXWHMRLGHLXXXXXXXXXXX 509
                        SKQP Q FQ                   WH RLGH            
Sbjct: 131 ------PALLPATSKQPVQCFQTATSPSVNIAGHKSVSFATWHSRLGHPNVDVMKLVFRN 184

Query: 510 XEFLS---VASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDV 635
               S   + S FC++C +GK      S S TV T P E+I SD+
Sbjct: 185 FNIQSINNIDSDFCSSCCLGKPHRLPSSLSKTVYTTPFELIFSDL 229


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 77.4 bits (189), Expect = 6e-13
 Identities = 54/169 (31%), Positives = 70/169 (41%), Gaps = 10/169 (5%)
 Frame = +3

Query: 171 VPKITKNLLSISQLTKDNPVFVEFYHDYCSVMDQTSKRELLRGVLSKGLY-------RL* 329
           VP+ITKNLLS+S+   DN VF EF+   C V D +++  L+ G L  GLY       +L 
Sbjct: 418 VPEITKNLLSVSKFAADNHVFFEFHPTSCFVKDPSTRTVLMHGQLKGGLYVFDNTQLKLP 477

Query: 330 LHQXXXXXXXXXXXXXXCVSKQPAQFQXXXXXXXXXXXXXXWHMRLGH---LXXXXXXXX 500
           LH                V   P                  WH RLGH            
Sbjct: 478 LHNSSCFASTALPSKEPTVPASPTS------------PFTLWHNRLGHPSSHIVSLVLNK 525

Query: 501 XXXXEFLSVASSFCNACHIGKSKHKHDSPSLTVTTKPLEIIHSDVWGPA 647
                   + S  C+ C +GK        S +  TKPLE+IH+D+WGPA
Sbjct: 526 CNLPHLNKIPSLICSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPA 574