BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00022959
         (362 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012858484.1| PREDICTED: pentatricopeptide repeat-containi...   103   4e-28
gb|EYU19829.1| hypothetical protein MIMGU_mgv1a000898mg [Erythra...   103   4e-28
ref|XP_011076849.1| PREDICTED: pentatricopeptide repeat-containi...    95   1e-27
ref|XP_009619247.1| PREDICTED: pentatricopeptide repeat-containi...    54   3e-10
ref|XP_002269194.2| PREDICTED: pentatricopeptide repeat-containi...    52   6e-09
emb|CBI25022.3| unnamed protein product [Vitis vinifera]               52   6e-09
ref|XP_015058177.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-07
ref|XP_004250470.2| PREDICTED: pentatricopeptide repeat-containi...    57   4e-07
ref|XP_010262938.1| PREDICTED: pentatricopeptide repeat-containi...    43   8e-06

>ref|XP_012858484.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Erythranthe guttata]
           gi|604299985|gb|EYU19828.1| hypothetical protein
           MIMGU_mgv1a000898mg [Erythranthe guttata]
          Length = 948

 Score =  103 bits (258), Expect(2) = 4e-28
 Identities = 51/68 (75%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
 Frame = +3

Query: 141 PTNPTTNSAGLRRPTTHKPLKTSTAHS-TQLPENPLKKFVNSQNSPPVTSSPSHDTLSNK 317
           P NP TNSAGLRRP T KPLKTS     +QLPENPLKKFVN QN+P  T+SP HDTLSNK
Sbjct: 47  PQNPNTNSAGLRRPATQKPLKTSIPQQPSQLPENPLKKFVNFQNTPSATNSPPHDTLSNK 106

Query: 318 LWLSSKLT 341
           LWLSSKL+
Sbjct: 107 LWLSSKLS 114



 Score = 47.8 bits (112), Expect(2) = 4e-28
 Identities = 25/45 (55%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = +2

Query: 14  MDIFSISS-VHCSHTPTPFSTSNLAGKQHYATSSTPPALVILASN 145
           MDIFSISS VH SHTP PF+   LAGK H+AT+++  +L++ +S+
Sbjct: 1   MDIFSISSAVHYSHTPPPFT---LAGKHHHATTTSAASLILASSS 42


>gb|EYU19829.1| hypothetical protein MIMGU_mgv1a000898mg [Erythranthe guttata]
          Length = 945

 Score =  103 bits (258), Expect(2) = 4e-28
 Identities = 51/68 (75%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
 Frame = +3

Query: 141 PTNPTTNSAGLRRPTTHKPLKTSTAHS-TQLPENPLKKFVNSQNSPPVTSSPSHDTLSNK 317
           P NP TNSAGLRRP T KPLKTS     +QLPENPLKKFVN QN+P  T+SP HDTLSNK
Sbjct: 47  PQNPNTNSAGLRRPATQKPLKTSIPQQPSQLPENPLKKFVNFQNTPSATNSPPHDTLSNK 106

Query: 318 LWLSSKLT 341
           LWLSSKL+
Sbjct: 107 LWLSSKLS 114



 Score = 47.8 bits (112), Expect(2) = 4e-28
 Identities = 25/45 (55%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = +2

Query: 14  MDIFSISS-VHCSHTPTPFSTSNLAGKQHYATSSTPPALVILASN 145
           MDIFSISS VH SHTP PF+   LAGK H+AT+++  +L++ +S+
Sbjct: 1   MDIFSISSAVHYSHTPPPFT---LAGKHHHATTTSAASLILASSS 42


>ref|XP_011076849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Sesamum indicum]
          Length = 951

 Score = 94.7 bits (234), Expect(2) = 1e-27
 Identities = 47/62 (75%), Positives = 54/62 (87%), Gaps = 1/62 (1%)
 Frame = +3

Query: 159 NSAGLRRPTTHKPLKTSTAHSTQLPENPLKKFVNSQNSPP-VTSSPSHDTLSNKLWLSSK 335
           ++  LRRPTT KPLK ST++S+QL ENPLK+FVNSQN PP VTSSPS DTLSNKLWLSSK
Sbjct: 54  STTSLRRPTTQKPLKASTSNSSQLRENPLKRFVNSQNGPPSVTSSPSRDTLSNKLWLSSK 113

Query: 336 LT 341
           L+
Sbjct: 114 LS 115



 Score = 55.5 bits (132), Expect(2) = 1e-27
 Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +2

Query: 14  MDIFSISS-VHCSHTPTPFSTSNLAGKQHYATSSTPPALVILASN 145
           MDIFS+SS VH SHTP  FSTS+LAGK H AT+S   A  ILASN
Sbjct: 1   MDIFSLSSTVHYSHTPPSFSTSSLAGKNHAATTSISLASFILASN 45


>ref|XP_009619247.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Nicotiana tomentosiformis]
          Length = 946

 Score = 53.5 bits (127), Expect(2) = 3e-10
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
 Frame = +3

Query: 150 PTTN--SAGLRRPTTH--KPLKTSTAHSTQLPENPLKKFVNSQNSPPVTSSPSHDTLSNK 317
           PTT+  SA LRRPTT+  K L    + + +  +NPLK  +NS   PP TS P   +LSNK
Sbjct: 56  PTTSYSSASLRRPTTNNNKSLNNPLSQNLEFTKNPLKLLLNS---PPATSPPP-PSLSNK 111

Query: 318 LWLSSKLT 341
           LWLS+KL+
Sbjct: 112 LWLSNKLS 119



 Score = 38.1 bits (87), Expect(2) = 3e-10
 Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 11  SMDIFSISSV-HCSHTPTPFSTSNLAGKQHYATSST 115
           S  IFS+SS  H S TP PF+TS LAGK H   +ST
Sbjct: 5   STTIFSLSSTAHYSPTPPPFTTSILAGKHHPTATST 40


>ref|XP_002269194.2| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 930

 Score = 51.6 bits (122), Expect(2) = 6e-09
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +3

Query: 141 PTNPTTNSAGLRRPTTHKPLKTSTAHSTQLPENPLKKFVNSQNSPPVTSSPSHDTLSNKL 320
           P  P+ +S  LRRP T KP    T  S +  +NPLK  VN   SP   ++P++  L+NKL
Sbjct: 43  PDEPSNSSGHLRRPKTLKPSLNPTPPSPKTTKNPLKNIVNPTISP---TNPAN--LTNKL 97

Query: 321 WLSSKLT 341
           WLSS+L+
Sbjct: 98  WLSSQLS 104



 Score = 35.4 bits (80), Expect(2) = 6e-09
 Identities = 19/32 (59%), Positives = 22/32 (68%)
 Frame = +2

Query: 14  MDIFSISSVHCSHTPTPFSTSNLAGKQHYATS 109
           MDIFS++S  C HT T FS S LAGK H  T+
Sbjct: 2   MDIFSLASPLCPHT-TTFSASILAGKTHPTTA 32


>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score = 51.6 bits (122), Expect(2) = 6e-09
 Identities = 30/67 (44%), Positives = 41/67 (61%)
 Frame = +3

Query: 141 PTNPTTNSAGLRRPTTHKPLKTSTAHSTQLPENPLKKFVNSQNSPPVTSSPSHDTLSNKL 320
           P  P+ +S  LRRP T KP    T  S +  +NPLK  VN   SP   ++P++  L+NKL
Sbjct: 43  PDEPSNSSGHLRRPKTLKPSLNPTPPSPKTTKNPLKNIVNPTISP---TNPAN--LTNKL 97

Query: 321 WLSSKLT 341
           WLSS+L+
Sbjct: 98  WLSSQLS 104



 Score = 35.4 bits (80), Expect(2) = 6e-09
 Identities = 19/32 (59%), Positives = 22/32 (68%)
 Frame = +2

Query: 14  MDIFSISSVHCSHTPTPFSTSNLAGKQHYATS 109
           MDIFS++S  C HT T FS S LAGK H  T+
Sbjct: 2   MDIFSLASPLCPHT-TTFSASILAGKTHPTTA 32


>ref|XP_015058177.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Solanum pennellii]
          Length = 932

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
 Frame = +3

Query: 39  FTVPTLQH--PSPPPISPE----NXXXXXXXXXXXXXFSLPTNPTTNSAGLRRPTTHKPL 200
           F++ +  H  PSPPP +                     S  T   T S  LRRPTT+KP 
Sbjct: 8   FSLSSTAHYSPSPPPFATSILAGKHHPSTTCILSLKSSSDSTEKPTTSTSLRRPTTNKPP 67

Query: 201 KTST-AHSTQLPENPLKKFVNSQNSPPVTSSPSHDTLSNKLWLSSKLT 341
             +T + + +  +NPLK  +   NSPP TSSP    LSNKLWLS+KL+
Sbjct: 68  DITTHSQNLEFSKNPLKLLL---NSPPNTSSP--PILSNKLWLSNKLS 110


>ref|XP_004250470.2| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Solanum lycopersicum]
          Length = 934

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 46/110 (41%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
 Frame = +3

Query: 39  FTVPTLQH--PSPPPISPENXXXXXXXXXXXXXF-----SLPTNPTTNSAGLRRPTTHKP 197
           F++ +  H  PSPPP +                F       P  PTT S  LRRPTT+KP
Sbjct: 8   FSLSSTAHYSPSPPPFATSILAGKHHPSTTCILFLKSSSDSPEKPTT-STSLRRPTTNKP 66

Query: 198 LKTSTAHSTQLP--ENPLKKFVNSQNSPPVTSSPSHDTLSNKLWLSSKLT 341
              +T HS  L   +NPLK  +   +SPP TSSP    LSNKLWLS+KL+
Sbjct: 67  PDITT-HSQNLAFSKNPLKLLL---SSPPNTSSP--PILSNKLWLSNKLS 110


>ref|XP_010262938.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Nelumbo nucifera]
           gi|720022106|ref|XP_010262939.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 955

 Score = 43.1 bits (100), Expect(2) = 8e-06
 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 147 NPTTNSAGLRRPTTHK--PLKTSTAHSTQLPENPLKKFVNSQNSPPVTSSPSHDTLSNKL 320
           NP+  S  +RRP T K  P K +   S ++  NPL+ F       P  +S + D L+NKL
Sbjct: 49  NPSRLSDNVRRPKTLKSPPAKPNPLQS-RISTNPLRNFTG-----PSKTSQNQDNLANKL 102

Query: 321 WLSSKLT 341
           WLSSK++
Sbjct: 103 WLSSKIS 109



 Score = 33.1 bits (74), Expect(2) = 8e-06
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = +2

Query: 14 MDIFSISSVHCSHTPTPFSTSNLAGK 91
          MDIFSISS H  H+ +PFS S  AGK
Sbjct: 2  MDIFSISSTHQCHS-SPFSPSTFAGK 26