BLASTX nr result

ID: Rehmannia28_contig00022942 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00022942
         (735 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB09734.1| hypothetical protein B456_001G161000, partial [Go...   114   1e-27
ref|YP_007516852.1| hypothetical protein GlmaxMp02 (mitochondrio...   101   4e-24
ref|YP_173477.1| hypothetical protein NitaMp140 [Nicotiana tabac...    61   1e-08
ref|NP_064104.1| orf110b gene product (mitochondrion) [Beta vulg...    56   9e-07
gb|KVH96909.1| hypothetical protein Ccrd_001000 [Cynara carduncu...    49   2e-06

>gb|KJB09734.1| hypothetical protein B456_001G161000, partial [Gossypium raimondii]
          Length = 244

 Score =  114 bits (286), Expect = 1e-27
 Identities = 58/66 (87%), Positives = 59/66 (89%)
 Frame = -1

Query: 735 CSNQLSYLNHFPKVCFLHRIAPYLTT*LVREKPLTNKNI*AFSLVRQAFEQLFQLPPNPP 556
           CSNQLSYLNHFPKV FLHRIAPYLTT LVREKPLTN  +  FSLVRQAFEQLFQLPPN P
Sbjct: 117 CSNQLSYLNHFPKVSFLHRIAPYLTTLLVREKPLTNM-LGLFSLVRQAFEQLFQLPPNLP 175

Query: 555 TCSRTE 538
           TCSRTE
Sbjct: 176 TCSRTE 181



 Score =  101 bits (252), Expect = 1e-22
 Identities = 49/53 (92%), Positives = 49/53 (92%)
 Frame = -3

Query: 412 DSTKRFFLSRNFARPFHFRAGGNGIRTHDTIFLYVDLANQCLKPLSHTSKLLI 254
           DSTKRFFLSRNFA P  FRAGGNGIRTHDTIFLYVDLANQCLKPLSH SKLLI
Sbjct: 190 DSTKRFFLSRNFACPLDFRAGGNGIRTHDTIFLYVDLANQCLKPLSHPSKLLI 242


>ref|YP_007516852.1| hypothetical protein GlmaxMp02 (mitochondrion) [Glycine max]
           gi|403311585|gb|AFR34333.1| hypothetical protein
           GlmaxMp02 (mitochondrion) [Glycine max]
          Length = 104

 Score =  101 bits (252), Expect = 4e-24
 Identities = 48/53 (90%), Positives = 50/53 (94%)
 Frame = -2

Query: 227 GWLPEGLSDPINCLSRSALARVLFFYERDSIQICHSLGDAFFSMNSPPLNDEL 69
           G LPEGLSDPINC+SRSALARVLF YERDSIQICHSLGDA FSMN+PPLNDEL
Sbjct: 3   GRLPEGLSDPINCVSRSALARVLFLYERDSIQICHSLGDALFSMNTPPLNDEL 55


>ref|YP_173477.1| hypothetical protein NitaMp140 [Nicotiana tabacum]
           gi|56806642|dbj|BAD83543.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 116

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -1

Query: 735 CSNQLSYLNHFPKVCFLHRIAPYLTT 658
           CSNQLSYLNHFPKVCFLHRIAPYLTT
Sbjct: 91  CSNQLSYLNHFPKVCFLHRIAPYLTT 116


>ref|NP_064104.1| orf110b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435128|ref|YP_004222346.1| hypothetical
           protein BevumaM_p112 (mitochondrion) [Beta vulgaris
           subsp. maritima] gi|346683219|ref|YP_004842151.1|
           hypothetical protein BemaM_p107 (mitochondrion) [Beta
           macrocarpa] gi|9087354|dbj|BAA99498.1| orf110b
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|317905682|emb|CBJ14076.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
           gi|319439861|emb|CBJ17566.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
           gi|320148051|emb|CBJ20714.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
           gi|345500137|emb|CBX24956.1| hypothetical protein
           (mitochondrion) [Beta macrocarpa]
           gi|384939116|emb|CBL51962.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 110

 Score = 55.8 bits (133), Expect = 9e-07
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -1

Query: 735 CSNQLSYLNHFPKVCFLHRIAPY 667
           CSNQLSYLNHFPKVCFLHRIAPY
Sbjct: 61  CSNQLSYLNHFPKVCFLHRIAPY 83


>gb|KVH96909.1| hypothetical protein Ccrd_001000 [Cynara cardunculus var. scolymus]
          Length = 156

 Score = 48.9 bits (115), Expect(2) = 2e-06
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = -1

Query: 417 DWTPPRGSFSHVISPAPFISVPE 349
           DWTPPRGSFSHVISPA F SVPE
Sbjct: 57  DWTPPRGSFSHVISPARFTSVPE 79



 Score = 31.2 bits (69), Expect(2) = 2e-06
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 556 NMLKNREPSRDWT 518
           NMLKNREP RDWT
Sbjct: 47  NMLKNREPPRDWT 59


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