BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00022643
         (1826 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III s...   671   0.0  
ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III s...   535   e-180
emb|CDP02819.1| unnamed protein product [Coffea canephora]            507   e-169
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       499   e-167
gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Erythra...   491   e-165
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s...   425   e-137
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s...   422   e-136
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   415   e-134
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s...   412   e-132
ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III s...   405   e-130
ref|XP_009621596.1| PREDICTED: DNA-directed RNA polymerase III s...   402   e-130
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   405   e-130
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p...   405   e-129
ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III s...   402   e-129
ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III s...   399   e-127
ref|XP_015578439.1| PREDICTED: DNA-directed RNA polymerase III s...   398   e-127
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p...   390   e-125
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s...   384   e-123
gb|EEF37239.1| DNA-directed RNA polymerase, putative [Ricinus co...   389   e-123
ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III s...   388   e-123

>ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum
            indicum]
          Length = 683

 Score =  671 bits (1730), Expect = 0.0
 Identities = 351/533 (65%), Positives = 399/533 (74%), Gaps = 6/533 (1%)
 Frame = -1

Query: 1583 GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPEY 1404
            GPS+ PNRP+RFAPKGSKFKPRPK EPSQ   P+ASD+VE  PVPKKEE GIK DIKPE+
Sbjct: 12   GPSQVPNRPSRFAPKGSKFKPRPKTEPSQLPPPAASDTVEGLPVPKKEEPGIKPDIKPEF 71

Query: 1403 ANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTRLYVL 1224
            AND  +M              DLM                     YF+P +D  TRLYVL
Sbjct: 72   ANDGNDMDVEVKPEVKEEEGDDLMETEAEAEPDDAIVREIDV---YFTPSIDSNTRLYVL 128

Query: 1223 QYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTTS 1044
            QYPLR  WRPYELD RC+EVRVKPAS E+E+DL V VDSKNYDSGADPRVQMKKQILT+S
Sbjct: 129  QYPLRPLWRPYELDDRCDEVRVKPASAELEVDLAVDVDSKNYDSGADPRVQMKKQILTSS 188

Query: 1043 WEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVKSEE 864
            W+P H SGYAVG+LTGNKLHLNP+HAV QLRP M+H+D+K+SK K++   NV D VK EE
Sbjct: 189  WKPPHASGYAVGILTGNKLHLNPVHAVVQLRPSMQHLDAKDSKRKTI---NVEDRVKLEE 245

Query: 863  PQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISFSMS 684
            PQEG             EQ  DS E W+PLKYH A SD+   YL+KMM+R  SQI FSMS
Sbjct: 246  PQEGKPSGSSKKLSKVPEQNNDSGEGWIPLKYHSAKSDVAAGYLRKMMSRGGSQIYFSMS 305

Query: 683  SNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDES 504
            S DYLNSLCPGTSSD FSSKGP  RVLLTLPLKERFRTWLL+GP VHRFDALK+L  DES
Sbjct: 306  SCDYLNSLCPGTSSDSFSSKGPPRRVLLTLPLKERFRTWLLEGPRVHRFDALKYLAPDES 365

Query: 503  VEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLPNN- 327
            VEE+L V+Q+HAR+VQGLWVPKSSLVYGTDQG++VLARDYVLLLFSKN+II +SQLP   
Sbjct: 366  VEEILGVIQEHARLVQGLWVPKSSLVYGTDQGVEVLARDYVLLLFSKNIIINNSQLPQRP 425

Query: 326  KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTI- 150
            +L+ AMK+VLNVLAV+R  F DWKLKELPD SF+K NPS+V+KQ       EK IND + 
Sbjct: 426  QLSKAMKEVLNVLAVERPAFSDWKLKELPDISFIKRNPSIVQKQEEEWECLEKKINDLLF 485

Query: 149  GGRNGPG----KKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
            GGRNGPG     KS+TT NPA  KSS++V  R P  A S+TAM EEVREA+TK
Sbjct: 486  GGRNGPGVKTSSKSNTTNNPAAPKSSNRVATRAPNGAPSKTAMPEEVREAVTK 538


>ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Erythranthe
            guttata]
          Length = 676

 Score =  535 bits (1377), Expect = e-180
 Identities = 302/535 (56%), Positives = 351/535 (65%), Gaps = 11/535 (2%)
 Frame = -1

Query: 1574 KGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELG--IKSDIKPEYA 1401
            + P R  RFAPKG K  P+PKIEPSQ L PSASD ++  P+PKKEE    I+ DIKPE+A
Sbjct: 15   RAPTRVVRFAPKGGKLNPKPKIEPSQPLPPSASDPMDTLPLPKKEEPKPEIEPDIKPEHA 74

Query: 1400 NDAVEMXXXXXXXXXXXXXXD----LMXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTRL 1233
            N A+EM                                         VY +  VDP T L
Sbjct: 75   NGAMEMDVEVKPDVKVKEDLMETEVAESVLDPVVKESTVDEVVREIDVYLNHSVDPNTCL 134

Query: 1232 YVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQIL 1053
            +V QYPLR  WRPYELD++C+EVRVKP+   VEIDL V   SKNYD+ ADP++QM+KQ L
Sbjct: 135  HVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEIDLAVDTYSKNYDTTADPKLQMQKQTL 194

Query: 1052 TTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGP-SNVNDTV 876
             ++W P H SG AV VL GNKL+LNPIHAV QLRP M+H+D+++SK K     SN  D+V
Sbjct: 195  RSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRPSMKHLDAEDSKKKKTNARSNTKDSV 254

Query: 875  KSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREV--SQ 702
            K E+PQ                QTK    DWVPLKYH A SD+   Y++KMMAREV  SQ
Sbjct: 255  KLEDPQPSGA------------QTKP---DWVPLKYHSARSDMAATYVKKMMAREVEGSQ 299

Query: 701  ISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKH 522
            ISFSMSSNDY+NSLCPGTSS  FSS  P IR LL LPLKERF+TWLL+   VHRFDALKH
Sbjct: 300  ISFSMSSNDYINSLCPGTSSGSFSSNVPPIRSLLALPLKERFKTWLLEANTVHRFDALKH 359

Query: 521  LIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDS 342
            L  DES+EEVL VLQD AR+VQGLW PKS LVYG D G+ VLARDYVL LFSKNVII +S
Sbjct: 360  LAPDESIEEVLEVLQDLARLVQGLWFPKSRLVYGIDHGLDVLARDYVLALFSKNVIITNS 419

Query: 341  QLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKI 165
            QLP   +LA AMKDVLNVLAV+R  F DWKLK  PD +F+K N S+VKK        EK 
Sbjct: 420  QLPLRPQLANAMKDVLNVLAVERPAFDDWKLKASPDSNFMKFNQSIVKKHEEEWQGVEKK 479

Query: 164  INDTIG-GRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
            IND     +N    +S+    PA  KSSS V  RTP V+ SRTAMS++VREAI K
Sbjct: 480  INDDFNVAKNKAAMRSNAAKKPAIPKSSSNVETRTPNVSTSRTAMSDDVREAIKK 534


>emb|CDP02819.1| unnamed protein product [Coffea canephora]
          Length = 687

 Score =  507 bits (1305), Expect = e-169
 Identities = 271/533 (50%), Positives = 338/533 (63%), Gaps = 7/533 (1%)
 Frame = -1

Query: 1580 PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPV-PKKEELGIKSDIKPEY 1404
            PS+ P RP+RFAPKGSKFKPR +   + S   +  + +++ PV P        +    + 
Sbjct: 9    PSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTTAAAGKAEDA 68

Query: 1403 ANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTRLYVL 1224
            A+ +V                +                      VY +P +DP T+LYVL
Sbjct: 69   ASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVYLTPSIDPNTKLYVL 128

Query: 1223 QYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTTS 1044
            QYPLR  WRPYELD RCEEVRVK  S EVE+DL V VDSKNYDS ADPRV M KQ LT+S
Sbjct: 129  QYPLRPLWRPYELDDRCEEVRVKSKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLTSS 188

Query: 1043 WEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVKSEE 864
            W+P   +GYAVGVL GNKLHLNPIHAV QLRP M+H   + SK ++   SN+ D  K EE
Sbjct: 189  WKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLEDNTKGEE 248

Query: 863  PQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISFSMS 684
               G             EQ KD+ EDW+PL YHGA SD++  Y++KM+  + S I FSM+
Sbjct: 249  VTTGSLKKQGKSSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMN 308

Query: 683  SNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDES 504
             +DY+N+LCPGTS++   S GPS RVLL+LPL+ERFRTWLLQGPP+HRFDALKHL  D S
Sbjct: 309  RHDYVNTLCPGTSNENNGSNGPSRRVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDAS 368

Query: 503  VEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP-NN 327
            VE++L VL  HA++VQGLW+PKSSL+YG DQGI  LARDYVLLLFS+  II +SQLP   
Sbjct: 369  VEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQ 428

Query: 326  KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTI- 150
            KL  AM+DVLN +A +R +  DWK KE PD +F+K N  +V++Q       EK+I + I 
Sbjct: 429  KLNRAMRDVLNTVAFERASLNDWKFKEPPDMTFIKLNSKIVREQEQTWERLEKLITEKIF 488

Query: 149  GGRNGPGKKSD----TTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
            G +N P  K+     TT NPATSKS SK  + +      R  MSEE REA+ K
Sbjct: 489  GDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPK 541


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  499 bits (1285), Expect = e-167
 Identities = 271/533 (50%), Positives = 339/533 (63%), Gaps = 7/533 (1%)
 Frame = -1

Query: 1580 PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPV-PKKEELGIKSDIKPEY 1404
            PS+ P RP+RFAPKGSKFKPR +   + S   +  + +++ PV P        +    + 
Sbjct: 9    PSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTTAAAGKAEDA 68

Query: 1403 ANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTRLYVL 1224
            A+ +V                +                      VY +P +DP T+LYVL
Sbjct: 69   ASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVYLTPSIDPNTKLYVL 128

Query: 1223 QYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTTS 1044
            QYPLR  WRPYELD RCEEVRVK  S EVE+DL V VDSKNYDS ADPRV M KQ LT+S
Sbjct: 129  QYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLTSS 188

Query: 1043 WEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVKSEE 864
            W+P   +GYAVGVL GNKLHLNPIHAV QLRP M+H   + SK ++   SN+ D  K EE
Sbjct: 189  WKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLEDNTKGEE 248

Query: 863  PQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISFSMS 684
               G             EQ KD+ EDW+PL YHGA SD++  Y++KM+  + S I FSM 
Sbjct: 249  VTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSM- 307

Query: 683  SNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDES 504
            ++DY+N+LCPGTS++   S GPS RVLL+LPL+ERFRTWLLQGPP+HRFDALKHL  D S
Sbjct: 308  NHDYVNTLCPGTSNENNGSNGPS-RVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDAS 366

Query: 503  VEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP-NN 327
            VE++L VL  HA++VQGLW+PKSSL+YG DQGI  LARDYVLLLFS+  II +SQLP   
Sbjct: 367  VEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQ 426

Query: 326  KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKIINDTI- 150
            KL  AM+DVL+ +A +R +  DWK KE PD +F+K NP +V++Q       EK+I + I 
Sbjct: 427  KLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIF 486

Query: 149  GGRNGPGKKSD----TTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
            G +N P  K+     TT NPATSKS SK  + +      R  MSEE REA+ K
Sbjct: 487  GDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPK 539


>gb|EYU44675.1| hypothetical protein MIMGU_mgv1a004477mg [Erythranthe guttata]
          Length = 525

 Score =  491 bits (1264), Expect = e-165
 Identities = 286/535 (53%), Positives = 334/535 (62%), Gaps = 11/535 (2%)
 Frame = -1

Query: 1574 KGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELG--IKSDIKPEYA 1401
            + P R  RFAPKG K  P+PKIEPSQ L PSASD ++  P+PKKEE    I+ DIKPE+A
Sbjct: 15   RAPTRVVRFAPKGGKLNPKPKIEPSQPLPPSASDPMDTLPLPKKEEPKPEIEPDIKPEHA 74

Query: 1400 NDAVEMXXXXXXXXXXXXXXD----LMXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTRL 1233
            N A+EM                                         VY +  VDP T L
Sbjct: 75   NGAMEMDVEVKPDVKVKEDLMETEVAESVLDPVVKESTVDEVVREIDVYLNHSVDPNTCL 134

Query: 1232 YVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQIL 1053
            +V QYPLR  WRPYELD++C+EVRVKP+   VEIDL V   SKNYD+ ADP++QM+KQ L
Sbjct: 135  HVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEIDLAVDTYSKNYDTTADPKLQMQKQTL 194

Query: 1052 TTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGP-SNVNDTV 876
             ++W P H SG AV VL GNKL+LNPIHAV QLRP M+H+D+++SK K     SN  D+V
Sbjct: 195  RSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRPSMKHLDAEDSKKKKTNARSNTKDSV 254

Query: 875  KSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREV--SQ 702
            K E+PQ                QTK    DWVPLKYH A SD+   Y++KMMAREV  SQ
Sbjct: 255  KLEDPQPS------------GAQTK---PDWVPLKYHSARSDMAATYVKKMMAREVEGSQ 299

Query: 701  ISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKH 522
            ISFSMSSNDY+NSLCPGTSS  FSS   +                      VHRFDALKH
Sbjct: 300  ISFSMSSNDYINSLCPGTSSGSFSSNANT----------------------VHRFDALKH 337

Query: 521  LIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDS 342
            L  DES+EEVL VLQD AR+VQGLW PKS LVYG D G+ VLARDYVL LFSKNVII +S
Sbjct: 338  LAPDESIEEVLEVLQDLARLVQGLWFPKSRLVYGIDHGLDVLARDYVLALFSKNVIITNS 397

Query: 341  QLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKI 165
            QLP   +LA AMKDVLNVLAV+R  F DWKLK  PD +F+K N S+VKK        EK 
Sbjct: 398  QLPLRPQLANAMKDVLNVLAVERPAFDDWKLKASPDSNFMKFNQSIVKKHEEEWQGVEKK 457

Query: 164  INDTIG-GRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
            IND     +N    +S+    PA  KSSS V  RTP V+ SRTAMS++VREAI K
Sbjct: 458  INDDFNVAKNKAAMRSNAAKKPAIPKSSSNVETRTPNVSTSRTAMSDDVREAIKK 512


>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
            protein product [Vitis vinifera]
          Length = 688

 Score =  425 bits (1093), Expect = e-137
 Identities = 255/543 (46%), Positives = 314/543 (57%), Gaps = 16/543 (2%)
 Frame = -1

Query: 1583 GPSKGP-NRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE 1407
            GP++ P  RP+RFAPK SK K  PK EPS   +PS  D V    + KKEE     D +P 
Sbjct: 8    GPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-----DSQPP 60

Query: 1406 YANDAVEMXXXXXXXXXXXXXXDL---MXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTR 1236
                A E               +    +                     +  P  D  T+
Sbjct: 61   LVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTK 120

Query: 1235 LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 1056
            +YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A    +MKKQ 
Sbjct: 121  IYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQT 180

Query: 1055 LTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 876
            L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+    + N  V
Sbjct: 181  LSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAV 240

Query: 875  K----SEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREV 708
            K    +EE   G             EQ  D+ E WVPLKYH + SD + RYLQKM+A + 
Sbjct: 241  KLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDN 300

Query: 707  SQISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDA 531
            S I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L +GPPVHRF A
Sbjct: 301  SPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSA 360

Query: 530  LKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVII 351
            LKH   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLFSK  +I
Sbjct: 361  LKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLI 420

Query: 350  KDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXX 174
              SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q       
Sbjct: 421  NYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESL 480

Query: 173  EKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREA 12
            EK I D I  GGR GP      K        TS  S   T  T      RTAMS E REA
Sbjct: 481  EKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREA 540

Query: 11   ITK 3
            + K
Sbjct: 541  LPK 543


>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Vitis vinifera] gi|731387214|ref|XP_010649169.1|
            PREDICTED: DNA-directed RNA polymerase III subunit RPC5
            isoform X1 [Vitis vinifera]
          Length = 693

 Score =  422 bits (1085), Expect = e-136
 Identities = 257/548 (46%), Positives = 315/548 (57%), Gaps = 21/548 (3%)
 Frame = -1

Query: 1583 GPSKGP-NRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE 1407
            GP++ P  RP+RFAPK SK K  PK EPS   +PS  D V    + KKEE     D +P 
Sbjct: 8    GPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-----DSQPP 60

Query: 1406 YANDAVEMXXXXXXXXXXXXXXDL---MXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTR 1236
                A E               +    +                     +  P  D  T+
Sbjct: 61   LVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTK 120

Query: 1235 LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 1056
            +YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A    +MKKQ 
Sbjct: 121  IYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQT 180

Query: 1055 LTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 876
            L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+    + N  V
Sbjct: 181  LSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAV 240

Query: 875  K----SEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREV 708
            K    +EE   G             EQ  D+ E WVPLKYH + SD + RYLQKM+A + 
Sbjct: 241  KLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDN 300

Query: 707  SQISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWL-----LQGPPV 546
            S I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L     LQGPPV
Sbjct: 301  SPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEKFSLQGPPV 360

Query: 545  HRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFS 366
            HRF ALKH   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLFS
Sbjct: 361  HRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFS 420

Query: 365  KNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXX 189
            K  +I  SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q  
Sbjct: 421  KGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRR 480

Query: 188  XXXXXEKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSE 27
                 EK I D I  GGR GP      K        TS  S   T  T      RTAMS 
Sbjct: 481  VWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSA 540

Query: 26   EVREAITK 3
            E REA+ K
Sbjct: 541  ETREALPK 548


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
            [Vitis vinifera]
          Length = 672

 Score =  415 bits (1066), Expect = e-134
 Identities = 252/541 (46%), Positives = 313/541 (57%), Gaps = 14/541 (2%)
 Frame = -1

Query: 1583 GPSKGP-NRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE 1407
            GP++ P  RP+RFAPK SK K  PK EPS   +PS  D V    + KKEE     D +P 
Sbjct: 8    GPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-----DSQPP 60

Query: 1406 YANDAVEMXXXXXXXXXXXXXXDL---MXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTR 1236
                A E               +    +                     +  P  D  T+
Sbjct: 61   LVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTK 120

Query: 1235 LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 1056
            +YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A    +MKKQ 
Sbjct: 121  IYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQT 180

Query: 1055 LTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 876
            L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+    + N  V
Sbjct: 181  LSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAV 240

Query: 875  KSEEPQEGXXXXXXXXXXXXSEQTKDS--EEDWVPLKYHGASSDLTERYLQKMMAREVSQ 702
            K E   E              E++  S  ++ WVPLKYH + SD + RYLQKM+A + S 
Sbjct: 241  KLEVSNE--------------EESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSP 286

Query: 701  ISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALK 525
            I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L +GPPVHRF ALK
Sbjct: 287  IQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALK 346

Query: 524  HLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKD 345
            H   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLFSK  +I  
Sbjct: 347  HFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINY 406

Query: 344  SQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEK 168
            SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q       EK
Sbjct: 407  SQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEK 466

Query: 167  IINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAIT 6
             I D I  GGR GP      K        TS  S   T  T      RTAMS E REA+ 
Sbjct: 467  QITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALP 526

Query: 5    K 3
            K
Sbjct: 527  K 527


>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
            [Vitis vinifera]
          Length = 677

 Score =  412 bits (1058), Expect = e-132
 Identities = 254/546 (46%), Positives = 314/546 (57%), Gaps = 19/546 (3%)
 Frame = -1

Query: 1583 GPSKGP-NRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE 1407
            GP++ P  RP+RFAPK SK K  PK EPS   +PS  D V    + KKEE     D +P 
Sbjct: 8    GPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-----DSQPP 60

Query: 1406 YANDAVEMXXXXXXXXXXXXXXDL---MXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTR 1236
                A E               +    +                     +  P  D  T+
Sbjct: 61   LVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTK 120

Query: 1235 LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 1056
            +YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A    +MKKQ 
Sbjct: 121  IYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQT 180

Query: 1055 LTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 876
            L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+    + N  V
Sbjct: 181  LSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAV 240

Query: 875  KSEEPQEGXXXXXXXXXXXXSEQTKDS--EEDWVPLKYHGASSDLTERYLQKMMAREVSQ 702
            K E   E              E++  S  ++ WVPLKYH + SD + RYLQKM+A + S 
Sbjct: 241  KLEVSNE--------------EESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSP 286

Query: 701  ISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWL-----LQGPPVHR 540
            I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L     LQGPPVHR
Sbjct: 287  IQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEKFSLQGPPVHR 346

Query: 539  FDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKN 360
            F ALKH   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLFSK 
Sbjct: 347  FSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKG 406

Query: 359  VIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXX 183
             +I  SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q    
Sbjct: 407  PLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVW 466

Query: 182  XXXEKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEV 21
               EK I D I  GGR GP      K        TS  S   T  T      RTAMS E 
Sbjct: 467  ESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAET 526

Query: 20   REAITK 3
            REA+ K
Sbjct: 527  REALPK 532


>ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Nicotiana sylvestris]
          Length = 681

 Score =  405 bits (1042), Expect = e-130
 Identities = 239/535 (44%), Positives = 314/535 (58%), Gaps = 8/535 (1%)
 Frame = -1

Query: 1583 GPSKGPNRPARFAPKGSKFKPRPK--IEPSQSLQPSASDSVEAFPVP-KKEELGIKSDIK 1413
            GPSK P RP+RFAPK SK KP+P+   +P      S+SD     P+P KKEEL  K  +K
Sbjct: 10   GPSKAPTRPSRFAPKSSKLKPQPQQVTKPKPETPLSSSDP----PIPTKKEELVSKPSVK 65

Query: 1412 PEYANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXV-YFSPCVDPKTR 1236
               A +   M              D+                       +F+P  DP ++
Sbjct: 66   DHPAENGAAMVKDDVPLDENTTGDDVAEEEQVTMDTDSVEDEVVREIDVFFTPSSDPNSQ 125

Query: 1235 LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 1056
            LYV QYPLR  WRPYEL++RC+EVR++P++ ++E+DL V  DSKN+D  +   V+M+KQ 
Sbjct: 126  LYVFQYPLRSVWRPYELEERCQEVRLRPSTAQMEVDLAVDFDSKNFDRDSVHAVKMEKQT 185

Query: 1055 LTTSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVND 882
            L+TSW P  +  SGYAVGVL G+KLHLNPIHAV QLRP  +H+   E K K++   +   
Sbjct: 186  LSTSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELKKKNIATGSDGK 245

Query: 881  TVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQ 702
            TV+++E +E                 KD EE WV LKYHGA SD++ RYLQ+M   E S 
Sbjct: 246  TVENKEVEEKKPAGPSKKQNKPPGNVKDIEEHWVHLKYHGARSDISARYLQEMAMEEGSP 305

Query: 701  ISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKH 522
            +SFSMS  DYLN++CPG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKH
Sbjct: 306  VSFSMSPIDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKH 364

Query: 521  LIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDS 342
            L  D+ V+E+LRVLQ +A++VQGLWVPKSSL+YG + G++VLAR+++L  FSK+ IIK  
Sbjct: 365  LALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQK 424

Query: 341  QLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKI 165
                      A K  L  LAV+R +  DWKLKE PD  F      VVK+Q        K 
Sbjct: 425  VFARRLDFLKAAKPTLKSLAVERLDLNDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQ 484

Query: 164  INDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
            IN  + GGRN P  K+    N   +  +     +    + SRT+MSE+ REA+ K
Sbjct: 485  INGILSGGRNKPPMKN---LNSNANIPALPGGGKPAPGSLSRTSMSEKTREALPK 536


>ref|XP_009621596.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Nicotiana tomentosiformis]
          Length = 584

 Score =  402 bits (1033), Expect = e-130
 Identities = 235/533 (44%), Positives = 307/533 (57%), Gaps = 6/533 (1%)
 Frame = -1

Query: 1583 GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVP-KKEELGIKSDIKPE 1407
            GPSK P RP+RFAPK SK KP+P  +P    +P    S    P+P KKEEL  K  +K  
Sbjct: 10   GPSKAPTRPSRFAPKSSKLKPQP--QPVTKPKPGTPSSSSDPPIPTKKEELVSKPSVKDH 67

Query: 1406 YANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVY-FSPCVDPKTRLY 1230
             A +   M              D+                        F+P  DP  +LY
Sbjct: 68   PAENGAAMGKDDVPLDENTTGDDMAEEEQIAMDTDSVEDEVVREIDVCFTPSSDPDNQLY 127

Query: 1229 VLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILT 1050
            V QYPLR  WRPYEL++RC+EVR++P++ ++E+DL +  DSKN+D  +   V+M+KQ L+
Sbjct: 128  VFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRDSVHAVKMEKQTLS 187

Query: 1049 TSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 876
            TSW P  +  SGYAVGVL G++LHLNPIHAV QLRP  +H+   E K K++  S+   TV
Sbjct: 188  TSWMPLSTCTSGYAVGVLIGDELHLNPIHAVVQLRPSQQHLKESELKKKNIATSSDGKTV 247

Query: 875  KSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQIS 696
            + ++ +E                 KD EE WV LKYHGA SD++ RYLQ+M   E S + 
Sbjct: 248  EKKDVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEMAMEEGSPVP 307

Query: 695  FSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLI 516
            FSMS  DYLN++CPG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKHL 
Sbjct: 308  FSMSPVDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLA 366

Query: 515  QDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQL 336
             D+ V+E+LRVLQ +A++VQGLWVPKSSL+YG + G++VLAR+++L  FSK+ IIK    
Sbjct: 367  LDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVF 426

Query: 335  PNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKIIN 159
                    A K  L  LAV+R +  DWKLKE PD  F      VVK+Q        K IN
Sbjct: 427  ARRLDFLKAAKPTLKSLAVERPDLIDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQIN 486

Query: 158  DTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
              + GGRN P  K+   +N          T     +   RT+MSE+ REA+ K
Sbjct: 487  GILSGGRNRPALKNPLNSNDNIPALPGGGTPAPGSLL--RTSMSEKTREALPK 537


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  405 bits (1042), Expect = e-130
 Identities = 246/550 (44%), Positives = 313/550 (56%), Gaps = 23/550 (4%)
 Frame = -1

Query: 1583 GPSKGPNRPARFAPKGSKFKPRPKI------EPSQSLQPSASDSVEAFPVPKKEELGIKS 1422
            GPS+   R  +FAPK SKF PR K       EPS   +P  S      P P  E +  K 
Sbjct: 11   GPSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPPPPPESISRKK 70

Query: 1421 -----DIKPEY-ANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFS 1260
                 DIKP   A    E                                      V+F+
Sbjct: 71   ENEEEDIKPPVIAETKTEQSFSNGAVKMEIEEEAKEDVIMNEGNREEEDMVVREIDVFFT 130

Query: 1259 PCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADP 1080
            P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS    
Sbjct: 131  PSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERAS 190

Query: 1079 RVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVG 900
            R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP M H+    SK K+  
Sbjct: 191  RLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAA 250

Query: 899  PSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYL 732
             ++   TVK EEP +    G            +EQ  D +E WVPLKYH + +D + +YL
Sbjct: 251  AADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYL 310

Query: 731  QKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGP 552
            Q+MMA E  +I F+MS  DY++SLCPG S++   ++GPS R+LL++PL+ER +  L +GP
Sbjct: 311  QRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLSEGP 369

Query: 551  PVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLL 372
            P HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  D   K LARDYVLLL
Sbjct: 370  PFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLARDYVLLL 428

Query: 371  FSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVV 204
            FSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLKE  D  F K  P +V
Sbjct: 429  FSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486

Query: 203  KKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSKVTARTPKVANSRTAM 33
            K Q       E  + + I  G + GP + K  T   P  + +S K   R      +   M
Sbjct: 487  KNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTM 546

Query: 32   SEEVREAITK 3
            S+E REAI K
Sbjct: 547  SDETREAIPK 556


>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao] gi|508699254|gb|EOX91150.1|
            Transcription regulators,zinc ion binding, putative
            isoform 3 [Theobroma cacao]
          Length = 736

 Score =  405 bits (1042), Expect = e-129
 Identities = 246/550 (44%), Positives = 313/550 (56%), Gaps = 23/550 (4%)
 Frame = -1

Query: 1583 GPSKGPNRPARFAPKGSKFKPRPKI------EPSQSLQPSASDSVEAFPVPKKEELGIKS 1422
            GPS+   R  +FAPK SKF PR K       EPS   +P  S      P P  E +  K 
Sbjct: 11   GPSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPPPPPESISRKK 70

Query: 1421 -----DIKPEY-ANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFS 1260
                 DIKP   A    E                                      V+F+
Sbjct: 71   ENEEEDIKPPVIAETKTEQSFSNGAVKMEIEEEAKEDVIMNEGNREEEDMVVREIDVFFT 130

Query: 1259 PCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADP 1080
            P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS    
Sbjct: 131  PSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERAS 190

Query: 1079 RVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVG 900
            R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP M H+    SK K+  
Sbjct: 191  RLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAA 250

Query: 899  PSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYL 732
             ++   TVK EEP +    G            +EQ  D +E WVPLKYH + +D + +YL
Sbjct: 251  AADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYL 310

Query: 731  QKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGP 552
            Q+MMA E  +I F+MS  DY++SLCPG S++   ++GPS R+LL++PL+ER +  L +GP
Sbjct: 311  QRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLSEGP 369

Query: 551  PVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLL 372
            P HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  D   K LARDYVLLL
Sbjct: 370  PFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLARDYVLLL 428

Query: 371  FSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVV 204
            FSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLKE  D  F K  P +V
Sbjct: 429  FSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIV 486

Query: 203  KKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSKVTARTPKVANSRTAM 33
            K Q       E  + + I  G + GP + K  T   P  + +S K   R      +   M
Sbjct: 487  KNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTM 546

Query: 32   SEEVREAITK 3
            S+E REAI K
Sbjct: 547  SDETREAIPK 556


>ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Nicotiana tomentosiformis]
          Length = 682

 Score =  402 bits (1033), Expect = e-129
 Identities = 235/533 (44%), Positives = 307/533 (57%), Gaps = 6/533 (1%)
 Frame = -1

Query: 1583 GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVP-KKEELGIKSDIKPE 1407
            GPSK P RP+RFAPK SK KP+P  +P    +P    S    P+P KKEEL  K  +K  
Sbjct: 10   GPSKAPTRPSRFAPKSSKLKPQP--QPVTKPKPGTPSSSSDPPIPTKKEELVSKPSVKDH 67

Query: 1406 YANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVY-FSPCVDPKTRLY 1230
             A +   M              D+                        F+P  DP  +LY
Sbjct: 68   PAENGAAMGKDDVPLDENTTGDDMAEEEQIAMDTDSVEDEVVREIDVCFTPSSDPDNQLY 127

Query: 1229 VLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILT 1050
            V QYPLR  WRPYEL++RC+EVR++P++ ++E+DL +  DSKN+D  +   V+M+KQ L+
Sbjct: 128  VFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRDSVHAVKMEKQTLS 187

Query: 1049 TSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 876
            TSW P  +  SGYAVGVL G++LHLNPIHAV QLRP  +H+   E K K++  S+   TV
Sbjct: 188  TSWMPLSTCTSGYAVGVLIGDELHLNPIHAVVQLRPSQQHLKESELKKKNIATSSDGKTV 247

Query: 875  KSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQIS 696
            + ++ +E                 KD EE WV LKYHGA SD++ RYLQ+M   E S + 
Sbjct: 248  EKKDVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEMAMEEGSPVP 307

Query: 695  FSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLI 516
            FSMS  DYLN++CPG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKHL 
Sbjct: 308  FSMSPVDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLA 366

Query: 515  QDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQL 336
             D+ V+E+LRVLQ +A++VQGLWVPKSSL+YG + G++VLAR+++L  FSK+ IIK    
Sbjct: 367  LDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVF 426

Query: 335  PNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKIIN 159
                    A K  L  LAV+R +  DWKLKE PD  F      VVK+Q        K IN
Sbjct: 427  ARRLDFLKAAKPTLKSLAVERPDLIDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQIN 486

Query: 158  DTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
              + GGRN P  K+   +N          T     +   RT+MSE+ REA+ K
Sbjct: 487  GILSGGRNRPALKNPLNSNDNIPALPGGGTPAPGSLL--RTSMSEKTREALPK 537


>ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Nicotiana tomentosiformis]
          Length = 681

 Score =  399 bits (1025), Expect = e-127
 Identities = 236/533 (44%), Positives = 313/533 (58%), Gaps = 6/533 (1%)
 Frame = -1

Query: 1583 GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVP-KKEELGIKSDIKPE 1407
            GPSK   RP+RFAPK SK KP+P  +P    +P    S    P+P KKEEL  K  +K  
Sbjct: 10   GPSKASTRPSRFAPKSSKLKPQP--QPVTKPKPETPLSSSDPPIPTKKEELFSKPSVKDH 67

Query: 1406 YANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXV-YFSPCVDPKTRLY 1230
             A +   +              D+                       +F+P  DP ++LY
Sbjct: 68   PAENGAAVGKDDVPLDENTTGDDVSEEEQVAMDTDSVDDEVVREIDVFFTPSSDPNSQLY 127

Query: 1229 VLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILT 1050
            V QYPLR  WRPYEL++RC+EVR++P++ ++E+DL V +DSKN+D  +   V+M+KQ L+
Sbjct: 128  VFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAVDLDSKNFDRDSVHAVKMEKQTLS 187

Query: 1049 TSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 876
            TSW P  +  SGYAVGVL G+KLHLNPIHAV QLRP  +H+   E K K++  S+   TV
Sbjct: 188  TSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELK-KNIATSSDGKTV 246

Query: 875  KSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQIS 696
            +++E +E                 KD EE WV LKYHGA SD++ RYLQ++   E S +S
Sbjct: 247  ENKEVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEIAMAEGSPVS 306

Query: 695  FSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLI 516
            FSMS  DYLN++CPG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKHL 
Sbjct: 307  FSMSPVDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLA 365

Query: 515  QDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQL 336
             D+ V+E+LRVLQ +A++VQGLWVPKSSL+YG + G++VLAR+++L  FSK+ IIK    
Sbjct: 366  LDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVF 425

Query: 335  PNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKIIN 159
                    A K  L  LAV+R +  DWKLKE PD  F      VVK+Q        K IN
Sbjct: 426  ARRLDFLKAAKPTLKSLAVERPDLNDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQIN 485

Query: 158  DTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 3
              + GGRN P  K+    NP  +  +     +    +  RT+MSE+ REA+ K
Sbjct: 486  GILSGGRNRPAMKN--PLNPNANIPALPGGGKPAPGSLLRTSMSEKTREALPK 536


>ref|XP_015578439.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Ricinus
            communis]
          Length = 699

 Score =  398 bits (1023), Expect = e-127
 Identities = 235/549 (42%), Positives = 321/549 (58%), Gaps = 23/549 (4%)
 Frame = -1

Query: 1580 PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAF------PVPKKEELGIKSD 1419
            PS+ P+RP+++APK +KFKP+PK +P+    P    S          P+ KK E   + +
Sbjct: 10   PSQVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSKKNEDDEEEE 69

Query: 1418 IKPEYA----NDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFSPCV 1251
            IKP+      N+A                 +                      V+F+P +
Sbjct: 70   IKPKIISTPKNEAWLSNNGAVKMEIDDSMDEDKREEGENEEEEEEDMIVREIDVFFTPSI 129

Query: 1250 DPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQ 1071
            D  T+LYV+QYPLR  WRPYELD+RCEEVRVKP S EVE+DLT+  DS N+D     +  
Sbjct: 130  DSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPAQASKYN 188

Query: 1070 MKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSN 891
             KKQ L+TS+ P  V+GYAVGVL GNKLHLNPIHAV QLRP +EHV+S +SK K+   + 
Sbjct: 189  FKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKN--SAT 246

Query: 890  VNDTVKSEEPQEGXXXXXXXXXXXXSE----QTKDSEEDWVPLKYHGASSDLTERYLQKM 723
            +N  VK E+  EG             E    Q  DSEE W+ LKYHG+ SD + RYL+KM
Sbjct: 247  LNPEVKLEDSNEGKPIGSSKKQIKRMEVTNNQISDSEECWISLKYHGSKSDFSSRYLEKM 306

Query: 722  MAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVH 543
            +A+E S + F+M+  DY++SLCP  S++   SKGP  R LL+LPL ER +  +L+GPPV 
Sbjct: 307  IAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQ 366

Query: 542  RFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSK 363
            RF  LKH   D+SVE+VL+VLQ++ ++VQGLW PKSSL++  D   K   RDYVLLLFSK
Sbjct: 367  RFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLF-PDANSKQGIRDYVLLLFSK 425

Query: 362  NVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXX 186
            N++I  SQ+    K+   +K  LN+ AV+R +FKDWK KE  D +F+K  P +VKKQ   
Sbjct: 426  NLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEA 485

Query: 185  XXXXEKIINDTIGGRNGPGKKSDTTTNPATSKSSSK---VTARTPKVAN-----SRTAMS 30
                EK ++  +  R+G     +    P    ++ K        PK+A+     ++T ++
Sbjct: 486  WDNTEKRLS-KVFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTIT 544

Query: 29   EEVREAITK 3
             E REA+ K
Sbjct: 545  VETREALLK 553


>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao] gi|508699253|gb|EOX91149.1|
            Transcription regulators,zinc ion binding, putative
            isoform 2 [Theobroma cacao]
          Length = 588

 Score =  390 bits (1002), Expect = e-125
 Identities = 216/433 (49%), Positives = 279/433 (64%), Gaps = 11/433 (2%)
 Frame = -1

Query: 1268 YFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSG 1089
            +F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL V VDS NYDS 
Sbjct: 31   FFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSE 90

Query: 1088 ADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSK 909
               R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP M H+    SK K
Sbjct: 91   RASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRK 150

Query: 908  SVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTE 741
            +   ++   TVK EEP +    G            +EQ  D +E WVPLKYH + +D + 
Sbjct: 151  NAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSA 210

Query: 740  RYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLL 561
            +YLQ+MMA E  +I F+MS  DY++SLCPG S++   ++GPS R+LL++PL+ER +  L 
Sbjct: 211  QYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLSIPLEERLKKLLS 269

Query: 560  QGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYV 381
            +GPP HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  D   K LARDYV
Sbjct: 270  EGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLARDYV 328

Query: 380  LLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLKELPDFSFVKSNP 213
            LLLFSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLKE  D  F K  P
Sbjct: 329  LLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYP 386

Query: 212  SVVKKQXXXXXXXEKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSKVTARTPKVANSR 42
             +VK Q       E  + + I  G + GP + K  T   P  + +S K   R      + 
Sbjct: 387  DIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAG 446

Query: 41   TAMSEEVREAITK 3
              MS+E REAI K
Sbjct: 447  RTMSDETREAIPK 459


>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X4 [Solanum tuberosum]
          Length = 536

 Score =  384 bits (986), Expect = e-123
 Identities = 229/535 (42%), Positives = 307/535 (57%), Gaps = 8/535 (1%)
 Frame = -1

Query: 1583 GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIK-SDIKPE 1407
            GPSK P R +RFAPK SK KP+P+ +P     P +  ++    + KKEEL +  ++    
Sbjct: 7    GPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPHSDSAI----LTKKEELSVSLAENGAV 62

Query: 1406 YANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFSPCVDPKTRLYV 1227
              ND V +               +                        +P  DP T+LYV
Sbjct: 63   TGNDDVPLEGETTGNYLGEDEGQVTDSDHDEVVREIDVC--------INPSFDPSTQLYV 114

Query: 1226 LQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTT 1047
             QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  +     +KKQ+L+T
Sbjct: 115  FQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATIKKQMLST 174

Query: 1046 SWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVK 873
            SW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K+V  +N   +V+
Sbjct: 175  SWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVTTNNDEKSVE 233

Query: 872  SEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISF 693
            +E+ +E                 KD  E W+ LKYHGA SD++ RYLQKM   E S + F
Sbjct: 234  NEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQKMAMEEGSPVPF 293

Query: 692  SMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQ 513
            SMS  DYLN+  PG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKHL  
Sbjct: 294  SMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHRFDALKHLAP 352

Query: 512  DESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP 333
            D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F+K ++IK S   
Sbjct: 353  DNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFG 412

Query: 332  NN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXEKIIND 156
               +   A    L  LAV+R +  DWKLKE PD  F      VV+++        K IND
Sbjct: 413  RRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQIND 472

Query: 155  TI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANS---RTAMSEEVREAITK 3
             + GGRN P     T  NP    +         K  +S   RT+MSEE+REA+ K
Sbjct: 473  VLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIREALPK 522


>gb|EEF37239.1| DNA-directed RNA polymerase, putative [Ricinus communis]
          Length = 677

 Score =  389 bits (998), Expect = e-123
 Identities = 229/545 (42%), Positives = 317/545 (58%), Gaps = 19/545 (3%)
 Frame = -1

Query: 1580 PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAF------PVPKKEELGIKSD 1419
            PS+ P+RP+++APK +KFKP+PK +P+    P    S          P+ KK E   + +
Sbjct: 10   PSQVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSKKNEDDEEEE 69

Query: 1418 IKPEYA----NDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFSPCV 1251
            IKP+      N+A                 +                      V+F+P +
Sbjct: 70   IKPKIISTPKNEAWLSNNGAVKMEIDDSMDEDKREEGENEEEEEEDMIVREIDVFFTPSI 129

Query: 1250 DPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQ 1071
            D  T+LYV+QYPLR  WRPYELD+RCEEVRVKP S EVE+DLT+  DS N+D     +  
Sbjct: 130  DSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPAQASKYN 188

Query: 1070 MKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSN 891
             KKQ L+TS+ P  V+GYAVGVL GNKLHLNPIHAV QLRP +EHV+S +SK K+   + 
Sbjct: 189  FKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKN--SAT 246

Query: 890  VNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMARE 711
            +N  VK E+  EG                   ++ W+ LKYHG+ SD + RYL+KM+A+E
Sbjct: 247  LNPEVKLEDSNEGKPIG------------SSKKQCWISLKYHGSKSDFSSRYLEKMIAQE 294

Query: 710  VSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDA 531
             S + F+M+  DY++SLCP  S++   SKGP  R LL+LPL ER +  +L+GPPV RF  
Sbjct: 295  SSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFSV 354

Query: 530  LKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVII 351
            LKH   D+SVE+VL+VLQ++ ++VQGLW PKSSL++  D   K   RDYVLLLFSKN++I
Sbjct: 355  LKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLF-PDANSKQGIRDYVLLLFSKNLVI 413

Query: 350  KDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXX 174
              SQ+    K+   +K  LN+ AV+R +FKDWK KE  D +F+K  P +VKKQ       
Sbjct: 414  NSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNT 473

Query: 173  EKIINDTIGGRNGPGKKSDTTTNPATSKSSSK---VTARTPKVAN-----SRTAMSEEVR 18
            EK ++  +  R+G     +    P    ++ K        PK+A+     ++T ++ E R
Sbjct: 474  EKRLS-KVFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTITVETR 532

Query: 17   EAITK 3
            EA+ K
Sbjct: 533  EALLK 537


>ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Populus
            euphratica]
          Length = 666

 Score =  388 bits (996), Expect = e-123
 Identities = 224/534 (41%), Positives = 303/534 (56%), Gaps = 17/534 (3%)
 Frame = -1

Query: 1580 PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE-- 1407
            PSK    P+RFAP   K +P+PK +P    +P   +SV   P P         D KP+  
Sbjct: 9    PSKVRKPPSRFAPTSKKPQPKPKPKP----KPEPQESVPVAPKPDHSVSNTAEDAKPKTD 64

Query: 1406 ---------YANDAVEMXXXXXXXXXXXXXXDLMXXXXXXXXXXXXXXXXXXXXVYFSPC 1254
                      +N  V+M              +                      VY++P 
Sbjct: 65   DTLSKTETGVSNGNVKMEIDAKEERGAAVKENDPMDVDKEEDEDEDDVVVREIDVYYTPS 124

Query: 1253 VDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRV 1074
            VDP T+LYV+QYPLR  WRPYELD+RC+EVRVKP S EVE+DL++  D+KNYD     R+
Sbjct: 125  VDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPQSAEVEVDLSID-DTKNYDPDIASRL 183

Query: 1073 QMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPS 894
             MKKQ L++SW P   +GYAVGVL GNKLHLNPIHAV QLRP M+++ S  SK K    S
Sbjct: 184  NMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNATS 243

Query: 893  NVNDTVKSEEPQEGXXXXXXXXXXXXSEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAR 714
              +    +E    G            +EQ  D EE W+PLKYHG+ SDL+ RYLQ M+A 
Sbjct: 244  GEDS---NEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSARYLQNMVAP 300

Query: 713  EVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFD 534
            E S I F+MS  DY++SLCPG S++     GPS RVLL+LPL+ER +   L+GPP+HRF 
Sbjct: 301  ESSTIEFAMSPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFA 360

Query: 533  ALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT---DQGIKVLARDYVLLLFSK 363
            AL+HLI ++S+E++L VLQ++ ++VQGLWVPK+SL++      + +K+ ARDY+LLLFSK
Sbjct: 361  ALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAARDYILLLFSK 420

Query: 362  NVIIKDSQLPNNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXX 183
            ++++  S+L        +K  LN+ AV+R +FKDWK KE  D  FV+  P +V+KQ    
Sbjct: 421  SLVVTPSELNVPMKPLILKSFLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQAW 480

Query: 182  XXXEKIINDTIGGRNGPGKKSDTTTNP---ATSKSSSKVTARTPKVANSRTAMS 30
                K I+     R G     +  T P    T ++   +    PKV  +    S
Sbjct: 481  EVMGKNISAAF-DRAGKSVSKNVITKPKKTMTDETREALRKALPKVLQTHKVCS 533