BLASTX nr result

ID: Rehmannia28_contig00021214 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00021214
         (519 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA65519.1| unnamed protein product [Nicotiana sylvestris]         80   4e-17
gb|AFW86827.1| hypothetical protein ZEAMMB73_415054 [Zea mays]         71   1e-12
emb|CDY45488.1| BnaCnng12470D [Brassica napus] gi|674896161|emb|...    53   3e-10
ref|XP_011101349.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    63   4e-09
gb|KJB09775.1| hypothetical protein B456_001G164300 [Gossypium r...    57   3e-07
gb|KJB82783.1| hypothetical protein B456_013G212600 [Gossypium r...    57   4e-07

>emb|CAA65519.1| unnamed protein product [Nicotiana sylvestris]
          Length = 42

 Score = 79.7 bits (195), Expect = 4e-17
 Identities = 38/42 (90%), Positives = 38/42 (90%)
 Frame = -3

Query: 472 MILGRIGQK*VCAAGVERSTLHRCGLTGLGLINPFFHSSIGP 347
           MILG IG K VCAAGVERSTLHRCGLTGLGLINPFFH SIGP
Sbjct: 1   MILGPIGSKWVCAAGVERSTLHRCGLTGLGLINPFFHLSIGP 42


>gb|AFW86827.1| hypothetical protein ZEAMMB73_415054 [Zea mays]
          Length = 161

 Score = 70.9 bits (172), Expect(2) = 1e-12
 Identities = 37/56 (66%), Positives = 38/56 (67%)
 Frame = -3

Query: 517 IAGWSSN*GAAVRSPMILGRIGQK*VCAAGVERSTLHRCGLTGLGLINPFFHSSIG 350
           IAGWSS  G        +     K VCAAGVERSTLHRCGLTGLGLINP FHSS G
Sbjct: 93  IAGWSSKTGGGRSVAYDIRTNWSKWVCAAGVERSTLHRCGLTGLGLINPLFHSSRG 148



 Score = 28.5 bits (62), Expect(2) = 1e-12
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 345 GRSLFWAGIDK*KS 304
           GRSLFWAGI+K KS
Sbjct: 148 GRSLFWAGIEKWKS 161


>emb|CDY45488.1| BnaCnng12470D [Brassica napus] gi|674896161|emb|CDY36712.1|
           BnaC02g31330D [Brassica napus]
          Length = 159

 Score = 53.1 bits (126), Expect(2) = 3e-10
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -3

Query: 433 AGVERSTLHRCGLTGLGLINPFFHSSIG 350
           + VERSTLHRCGLTGLGL NPFFHSS G
Sbjct: 97  SSVERSTLHRCGLTGLGLRNPFFHSSRG 124



 Score = 38.1 bits (87), Expect(2) = 3e-10
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = -2

Query: 362 FINRALVGHFSGPGSISRSHKK 297
           FIN  LV HFSGPGSISRSHKK
Sbjct: 133 FIN--LVAHFSGPGSISRSHKK 152


>ref|XP_011101349.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC105179429 [Sesamum indicum]
          Length = 204

 Score = 62.8 bits (151), Expect = 4e-09
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   KNEMHRGPSFCCGMLLRFTDSQGASGPT 85
           KNEMHRGPSFCCGMLLRFTD QGASGPT
Sbjct: 177 KNEMHRGPSFCCGMLLRFTDLQGASGPT 204


>gb|KJB09775.1| hypothetical protein B456_001G164300 [Gossypium raimondii]
          Length = 174

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +3

Query: 3   RMKCIGDHPFVAACSSDLRIRRGPQ 77
           RMKCIGDHPFVAACSSDLRIRRGPQ
Sbjct: 125 RMKCIGDHPFVAACSSDLRIRRGPQ 149


>gb|KJB82783.1| hypothetical protein B456_013G212600 [Gossypium raimondii]
          Length = 212

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = +3

Query: 3   RMKCIGDHPFVAACSSDLRIRRGPQALLS 89
           RMKCI DHPFVA CSSDLRIRRGPQ LLS
Sbjct: 165 RMKCIEDHPFVAGCSSDLRIRRGPQTLLS 193


Top