BLASTX nr result

ID: Rehmannia28_contig00021165 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00021165
         (410 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088516.1| PREDICTED: pentatricopeptide repeat-containi...    92   5e-19
ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-10

>ref|XP_011088516.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Sesamum indicum]
           gi|747082397|ref|XP_011088517.1| PREDICTED:
           pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Sesamum indicum]
           gi|747082399|ref|XP_011088518.1| PREDICTED:
           pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Sesamum indicum]
          Length = 1190

 Score = 91.7 bits (226), Expect = 5e-19
 Identities = 52/105 (49%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = +1

Query: 103 MESSISLTPRSFSLITRAPVSWPHSPRAIGLLRSEFLSRGHTXXXXXXXXXXXXXXSQSH 282
           MESS SL P++FSL TRAPVSWP S R + LLRSEFL  GH               SQ +
Sbjct: 1   MESSFSLKPQAFSLTTRAPVSWPLSTRPVSLLRSEFLGCGHNLRLPRRRCKKLRLQSQPY 60

Query: 283 CYQFLFKASLDSQP---XXXXXXXXXXXXXXYFTYSRKQLNIKQM 408
            Y+FLFKA+L+SQ                  YFTYSRKQ N+KQM
Sbjct: 61  YYKFLFKATLESQQMLVVVAAFAAVSAITVVYFTYSRKQFNVKQM 105


>ref|XP_012837131.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic [Erythranthe guttata]
          Length = 1102

 Score = 66.2 bits (160), Expect = 4e-10
 Identities = 41/97 (42%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
 Frame = +1

Query: 127 PRSFSLITRAPVSWPHSPRAIGLLRSEFLSRGHTXXXXXXXXXXXXXXSQSHCYQFLFKA 306
           P++ SL+TR P+ +P SP A+G+LRSEFL  GH                QS   +FLFKA
Sbjct: 7   PQTLSLLTRTPI-FPLSPCAVGILRSEFLGSGHNLRLQRRRCKKSRHKHQSDNCKFLFKA 65

Query: 307 SLDSQP---XXXXXXXXXXXXXXYFTYSRKQLNIKQM 408
           SL+SQP                 YF+YSRK  NI QM
Sbjct: 66  SLESQPIFVIAAAVATVSAMTVVYFSYSRKLFNIAQM 102