BLASTX nr result
ID: Rehmannia28_contig00020925
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00020925
(3343 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVH20946.1| Copper centre Cu(A), partial [Cynara cardunculus ... 206 1e-54
ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochond... 86 2e-16
gb|KJB09741.1| hypothetical protein B456_001G161700 [Gossypium r... 91 2e-15
gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Sola... 81 1e-14
ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus... 78 9e-14
ref|YP_008802487.1| succinate dehydrogenase subunit 3 (mitochond... 78 1e-13
ref|YP_003587361.1| succinate dehydrogenase subunit 3 [Cucurbita... 78 1e-13
ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta... 78 1e-13
ref|YP_009121956.1| succinate dehydrogenase subunit 3 (mitochond... 78 1e-13
ref|YP_009049687.1| succinate dehydrogenase subunit 3 (mitochond... 78 1e-13
gb|AIG89919.1| succinate dehydrogenase subunit 3 (mitochondrion)... 78 1e-13
gb|KFK42008.1| hypothetical protein AALP_AA2G200300 [Arabis alpina] 73 8e-13
ref|YP_009045752.1| succinate dehydrogenase subunit 3 (mitochond... 75 8e-13
ref|YP_004237261.1| succinate dehydrogenase subunit 3 (mitochond... 75 1e-12
gb|AHX80427.1| succinate dehydrogenase subunit 3, partial (mitoc... 75 2e-12
gb|ALF04073.1| succinate dehydrogenase subunit 3 (mitochondrion)... 74 3e-12
ref|XP_015868827.1| PREDICTED: succinate dehydrogenase cytochrom... 74 4e-12
ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica pa... 74 4e-12
gb|AGL75423.1| succinate dehydrogenase subunit 3 (mitochondrion)... 73 5e-12
emb|CDP17405.1| unnamed protein product [Coffea canephora] 73 6e-12
>gb|KVH20946.1| Copper centre Cu(A), partial [Cynara cardunculus var. scolymus]
Length = 423
Score = 206 bits (525), Expect = 1e-54
Identities = 105/129 (81%), Positives = 107/129 (82%)
Frame = +2
Query: 71 SEWLVVNSALVDGIPLCGWHSRNHGTLHTEQASLRDETPAQGPQFSLGGRTKDLWKSGLP 250
SEWLV NSALVDGIPLCGWHSRNHG LHTEQ SLRDETPAQGPQFSLGGRTKDLWKSGL
Sbjct: 178 SEWLVANSALVDGIPLCGWHSRNHGELHTEQTSLRDETPAQGPQFSLGGRTKDLWKSGLA 237
Query: 251 RPHGQRNSGPEGGV*RPYSSTDFFFFL*VMRRGPVQDRTVPLQRQQTLSTARRHSLSELF 430
RPHGQRNS + F L VMRRGPVQDRTVPLQRQQTLSTARRHSLSELF
Sbjct: 238 RPHGQRNS----------VLREEFRGLIVMRRGPVQDRTVPLQRQQTLSTARRHSLSELF 287
Query: 431 QLLYDFVPR 457
LL+DFVPR
Sbjct: 288 HLLHDFVPR 296
>ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochondrion) (mitochondrion)
[Erythranthe guttata] gi|340007673|gb|AEK26537.1|
succinate dehydrogenase subunit 3 (mitochondrion)
(mitochondrion) [Erythranthe guttata]
Length = 111
Score = 85.9 bits (211), Expect = 2e-16
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +2
Query: 3206 QKKI*PKMNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
+KKI PKMNILRPLSPHLPIYKPQLTSTF I HRISGAFLATILFF
Sbjct: 2 KKKIQPKMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATILFF 47
>gb|KJB09741.1| hypothetical protein B456_001G161700 [Gossypium raimondii]
Length = 407
Score = 90.5 bits (223), Expect = 2e-15
Identities = 59/125 (47%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +3
Query: 120 AAGTRGTTGHSIQSKQVLGM-RRPRKDLNSH*EVEPRTYGSRGYPVPMGNATVALREEFR 296
AAG G+ G SKQVLGM P + + G P P G LREEFR
Sbjct: 266 AAGAVGSQG----SKQVLGMDETPAQGPQFSLGGRTKDLWKSGLPCPHGQRNSVLREEFR 321
Query: 297 GLIVARTSFSFYRSCEGGQSKIVLFLYKDNRRSQRLGATLFLSYSSFFMISCRGEQTKQK 476
G GQSKIVLFLYKDNRRSQRLG TLFLSYSSFF++SCR ++
Sbjct: 322 G----------------GQSKIVLFLYKDNRRSQRLGVTLFLSYSSFFILSCRAIAKPRE 365
Query: 477 KEGRL 491
+GR+
Sbjct: 366 AKGRI 370
>gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum]
gi|316996003|dbj|BAD83440.2| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana tabacum]
Length = 108
Score = 80.9 bits (198), Expect = 1e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATI+FF
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFF 39
>ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
gi|295311667|ref|YP_003587234.1| succinate dehydrogenase
subunit 3 [Citrullus lanatus] gi|259156794|gb|ACV96656.1|
succinate dehydrogenase subunit 3 [Citrullus lanatus]
gi|259156795|gb|ACV96657.1| succinate dehydrogenase
subunit 3 [Citrullus lanatus]
Length = 95
Score = 77.8 bits (190), Expect = 9e-14
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLAT++ F
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLF 39
>ref|YP_008802487.1| succinate dehydrogenase subunit 3 (mitochondrion) (mitochondrion)
[Asclepias syriaca] gi|556562358|gb|AGZ63054.1| succinate
dehydrogenase subunit 3 (mitochondrion) (mitochondrion)
[Asclepias syriaca]
Length = 109
Score = 78.2 bits (191), Expect = 1e-13
Identities = 39/51 (76%), Positives = 42/51 (82%)
Frame = +2
Query: 3191 SRANEQKKI*PKMNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
S+ N +K K NILRPLSPHLPIYKPQLTSTFSIFHRISGAFL TI+ F
Sbjct: 3 SQVNSKKN---KFNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLVTIVLF 50
>ref|YP_003587361.1| succinate dehydrogenase subunit 3 [Cucurbita pepo]
gi|259156837|gb|ACV96698.1| succinate dehydrogenase
subunit 3 [Cucurbita pepo]
Length = 105
Score = 77.8 bits (190), Expect = 1e-13
Identities = 36/39 (92%), Positives = 38/39 (97%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLAT++ F
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLF 39
>ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
gi|57013992|ref|YP_173464.1| succinate dehydrogenase
subunit 3 [Nicotiana tabacum]
gi|57014032|ref|YP_173503.1| succinate dehydrogenase
subunit 3 [Nicotiana tabacum] gi|56806628|dbj|BAD83529.1|
succinate dehydrogenase subunit 3 (mitochondrion)
[Nicotiana tabacum] gi|56806668|dbj|BAD83569.1| succinate
dehydrogenase subunit 3 (mitochondrion) [Nicotiana
tabacum] gi|756762098|gb|AJM70207.1| succinate
dehydrogenase subunit 3 (mitochondrion) [Nicotiana
tabacum/Hyoscyamus niger cybrid]
gi|756762122|gb|AJM70230.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana tabacum/Hyoscyamus
niger cybrid] gi|756762137|gb|AJM70242.1| succinate
dehydrogenase subunit 3 (mitochondrion) [Nicotiana
tabacum/Hyoscyamus niger cybrid]
gi|927029487|gb|ALD61781.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana tabacum]
gi|927029488|gb|ALD61782.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana tabacum]
gi|1008910438|gb|AMR36204.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana sylvestris]
gi|1008910457|gb|AMR36223.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana sylvestris]
gi|1008910466|gb|AMR36232.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Nicotiana sylvestris]
Length = 108
Score = 77.8 bits (190), Expect = 1e-13
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTFSI HRISGAFLATI+FF
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFF 39
>ref|YP_009121956.1| succinate dehydrogenase subunit 3 (mitochondrion) [Hyoscyamus niger]
gi|756142189|gb|AJK91400.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Hyoscyamus niger]
Length = 108
Score = 77.8 bits (190), Expect = 1e-13
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTFSI HRISGAFLATI+FF
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFF 39
>ref|YP_009049687.1| succinate dehydrogenase subunit 3 (mitochondrion) [Capsicum annuum]
gi|667751959|gb|AIG90045.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Capsicum annuum]
Length = 110
Score = 77.8 bits (190), Expect = 1e-13
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTFSI HRISGAFLATI+FF
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFF 39
>gb|AIG89919.1| succinate dehydrogenase subunit 3 (mitochondrion) [Capsicum annuum]
Length = 110
Score = 77.8 bits (190), Expect = 1e-13
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTFSI HRISGAFLATI+FF
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFF 39
>gb|KFK42008.1| hypothetical protein AALP_AA2G200300 [Arabis alpina]
Length = 35
Score = 73.2 bits (178), Expect = 8e-13
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 105 MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH 209
MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH
Sbjct: 1 MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH 35
>ref|YP_009045752.1| succinate dehydrogenase subunit 3 (mitochondrion) [Batis maritima]
gi|655168526|gb|AIC83355.1| succinate dehydrogenase
subunit 3 (mitochondrion) (mitochondrion) [Batis
maritima]
Length = 108
Score = 75.5 bits (184), Expect = 8e-13
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTF I+HRISGAFLATI+ F
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPIYHRISGAFLATIVLF 39
>ref|YP_004237261.1| succinate dehydrogenase subunit 3 (mitochondrion) [Ricinus communis]
gi|322394268|gb|ADW96025.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Ricinus communis]
Length = 103
Score = 74.7 bits (182), Expect = 1e-12
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTST+ I HRISGAFLATI+FF
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTYPISHRISGAFLATIVFF 39
>gb|AHX80427.1| succinate dehydrogenase subunit 3, partial (mitochondrion) [Parinari
campestris]
Length = 124
Score = 75.1 bits (183), Expect = 2e-12
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2
Query: 3224 KMNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
+ ILRPLSPHLPIYKPQLTSTF IFHRISGAFLATI+FF
Sbjct: 9 RKKILRPLSPHLPIYKPQLTSTFPIFHRISGAFLATIVFF 48
>gb|ALF04073.1| succinate dehydrogenase subunit 3 (mitochondrion) [Cannabis sativa]
Length = 103
Score = 73.6 bits (179), Expect = 3e-12
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTF I HRISGAFLATI+ F
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLF 39
>ref|XP_015868827.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit-like
[Ziziphus jujuba] gi|1004606532|gb|AMP43654.1| succinate
dehydrogenase subunit 3 (mitochondrion) [Ziziphus jujuba]
Length = 105
Score = 73.6 bits (179), Expect = 4e-12
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTF I HRISGAFLATI+ F
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLF 39
>ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica papaya]
gi|170522372|gb|ACB20482.1| succinate dehydrogenase
subunit 3 (mitochondrion) [Carica papaya]
Length = 108
Score = 73.6 bits (179), Expect = 4e-12
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTF I HRISGAFLATI+ F
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLF 39
>gb|AGL75423.1| succinate dehydrogenase subunit 3 (mitochondrion) [Utricularia gibba]
Length = 104
Score = 73.2 bits (178), Expect = 5e-12
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRPLSPHLPIYKPQLTSTF I +RISGAFLATI+FF
Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISNRISGAFLATIVFF 39
>emb|CDP17405.1| unnamed protein product [Coffea canephora]
Length = 102
Score = 72.8 bits (177), Expect = 6e-12
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 3227 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATILFF 3343
MNILRP SPHLPIYKPQLTSTFSI HRISGAFLATI+ F
Sbjct: 1 MNILRPNSPHLPIYKPQLTSTFSISHRISGAFLATIVLF 39