BLASTX nr result
ID: Rehmannia28_contig00020888
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00020888
(323 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011090005.1| PREDICTED: pentatricopeptide repeat-containi... 171 3e-48
gb|EYU36097.1| hypothetical protein MIMGU_mgv1a020159mg [Erythra... 160 1e-44
ref|XP_012838555.1| PREDICTED: pentatricopeptide repeat-containi... 160 3e-44
ref|XP_011021682.1| PREDICTED: pentatricopeptide repeat-containi... 151 4e-42
ref|XP_009801460.1| PREDICTED: pentatricopeptide repeat-containi... 154 8e-42
emb|CDP07966.1| unnamed protein product [Coffea canephora] 152 2e-41
ref|XP_015895887.1| PREDICTED: pentatricopeptide repeat-containi... 151 4e-41
ref|XP_011021681.1| PREDICTED: pentatricopeptide repeat-containi... 151 6e-41
gb|EEF40501.1| pentatricopeptide repeat-containing protein, puta... 148 8e-41
ref|XP_002314741.2| hypothetical protein POPTR_0010s10900g [Popu... 150 9e-41
emb|CBI27495.3| unnamed protein product [Vitis vinifera] 149 2e-40
ref|XP_006470889.1| PREDICTED: pentatricopeptide repeat-containi... 149 2e-40
ref|XP_015167622.1| PREDICTED: pentatricopeptide repeat-containi... 150 2e-40
ref|XP_009601923.1| PREDICTED: pentatricopeptide repeat-containi... 149 2e-40
ref|XP_004237182.2| PREDICTED: pentatricopeptide repeat-containi... 149 3e-40
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi... 149 3e-40
ref|XP_015073573.1| PREDICTED: pentatricopeptide repeat-containi... 149 3e-40
ref|XP_015576450.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 148 3e-40
gb|ABK95746.1| unknown [Populus trichocarpa] 138 2e-39
emb|CBI24106.3| unnamed protein product [Vitis vinifera] 146 2e-39
>ref|XP_011090005.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Sesamum indicum]
Length = 621
Score = 171 bits (432), Expect = 3e-48
Identities = 82/107 (76%), Positives = 90/107 (84%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
G YS+AE VF+EME+KG+ NC KMGRTRDA+RLVAKMK+RGCEPNVW Y
Sbjct: 431 GRYSKAESVFAEMERKGFDNCIVAYSSMVAAYAKMGRTRDAMRLVAKMKERGCEPNVWTY 490
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NSLLDMNG+ALNLR VEKTWKEMKRRKI+PDRVSYTTVISAYNRARE
Sbjct: 491 NSLLDMNGRALNLRFVEKTWKEMKRRKIIPDRVSYTTVISAYNRARE 537
>gb|EYU36097.1| hypothetical protein MIMGU_mgv1a020159mg [Erythranthe guttata]
Length = 573
Score = 160 bits (405), Expect = 1e-44
Identities = 76/107 (71%), Positives = 86/107 (80%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+ E VFSEMEKKGY NC K GRT++A LVAKMKQRGCEPNVWIY
Sbjct: 384 GLYSKGETVFSEMEKKGYRNCVVAYSSMIAAYAKTGRTKEANMLVAKMKQRGCEPNVWIY 443
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NS+LDMNG+A N+RLVEKTWKEMKRR+I+PDRVSYT+VIS YNR +E
Sbjct: 444 NSILDMNGRASNMRLVEKTWKEMKRRRIVPDRVSYTSVISGYNRVKE 490
>ref|XP_012838555.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Erythranthe guttata]
Length = 624
Score = 160 bits (405), Expect = 3e-44
Identities = 76/107 (71%), Positives = 86/107 (80%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+ E VFSEMEKKGY NC K GRT++A LVAKMKQRGCEPNVWIY
Sbjct: 435 GLYSKGETVFSEMEKKGYRNCVVAYSSMIAAYAKTGRTKEANMLVAKMKQRGCEPNVWIY 494
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NS+LDMNG+A N+RLVEKTWKEMKRR+I+PDRVSYT+VIS YNR +E
Sbjct: 495 NSILDMNGRASNMRLVEKTWKEMKRRRIVPDRVSYTSVISGYNRVKE 541
>ref|XP_011021682.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like isoform X2 [Populus euphratica]
Length = 413
Score = 151 bits (381), Expect = 4e-42
Identities = 71/107 (66%), Positives = 86/107 (80%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+AEMVFSEME+KG+ C K GR RDA+RLVAKMK +GCEPNVWIY
Sbjct: 223 GLYSKAEMVFSEMEEKGFDKCVVAYSSMISMYGKTGRARDAMRLVAKMKLKGCEPNVWIY 282
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NSLLDM+G+A NLR VEK WKEMKRRK+ PD+V+Y++VISAYN+++E
Sbjct: 283 NSLLDMHGRAKNLRQVEKLWKEMKRRKVTPDKVTYSSVISAYNKSKE 329
>ref|XP_009801460.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Nicotiana sylvestris]
Length = 641
Score = 154 bits (388), Expect = 8e-42
Identities = 72/107 (67%), Positives = 86/107 (80%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS AEMVFSEME+KG+ C K GR +DA++LVAKMK+RGC+PNVW+Y
Sbjct: 451 GLYSNAEMVFSEMEQKGFDKCVVAYSSMIAMYGKTGRPKDAMKLVAKMKERGCQPNVWVY 510
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
N+LLD++GK LNLR VEK WKEMKRRKI PDRVSYT++ISAY+RARE
Sbjct: 511 NALLDIHGKVLNLRQVEKIWKEMKRRKIFPDRVSYTSIISAYSRARE 557
>emb|CDP07966.1| unnamed protein product [Coffea canephora]
Length = 615
Score = 152 bits (385), Expect = 2e-41
Identities = 73/107 (68%), Positives = 85/107 (79%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
G Y +AEM+FSEME+KG+ C K GR DA+RLVAKMK+RGCEPNVWIY
Sbjct: 425 GQYFKAEMIFSEMEEKGFDKCVVAYASMVAMYGKTGRVGDAMRLVAKMKERGCEPNVWIY 484
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NSLLDM+G+A+NLR VEK WKEM RRK+LPDRVSYT+VISAY+RARE
Sbjct: 485 NSLLDMHGRAVNLRQVEKIWKEMNRRKVLPDRVSYTSVISAYSRARE 531
>ref|XP_015895887.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic isoform X1 [Ziziphus jujuba]
Length = 610
Score = 151 bits (382), Expect = 4e-41
Identities = 70/107 (65%), Positives = 86/107 (80%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+AE +FSEME+KG+ C K GR R+A+R+VAKMK+RGCEPNVWIY
Sbjct: 420 GLYSKAETIFSEMEQKGFEKCVVAYCSMVVMYGKTGRIREAMRIVAKMKERGCEPNVWIY 479
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
N+LLDM+G+A NLR VEK WKEMKRRK+ PD+VSYT+VISAYN+AR+
Sbjct: 480 NALLDMHGRAKNLRQVEKLWKEMKRRKVAPDKVSYTSVISAYNKARD 526
>ref|XP_011021681.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like isoform X1 [Populus euphratica]
Length = 613
Score = 151 bits (381), Expect = 6e-41
Identities = 71/107 (66%), Positives = 86/107 (80%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+AEMVFSEME+KG+ C K GR RDA+RLVAKMK +GCEPNVWIY
Sbjct: 423 GLYSKAEMVFSEMEEKGFDKCVVAYSSMISMYGKTGRARDAMRLVAKMKLKGCEPNVWIY 482
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NSLLDM+G+A NLR VEK WKEMKRRK+ PD+V+Y++VISAYN+++E
Sbjct: 483 NSLLDMHGRAKNLRQVEKLWKEMKRRKVTPDKVTYSSVISAYNKSKE 529
>gb|EEF40501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 449
Score = 148 bits (374), Expect = 8e-41
Identities = 70/107 (65%), Positives = 84/107 (78%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+AEMVF EM+ KG+ C K GRTRDA+RLVAKMK +GCEPNVWIY
Sbjct: 259 GLYSKAEMVFLEMQGKGFDKCVVAYSSIVAMYGKTGRTRDAMRLVAKMKVKGCEPNVWIY 318
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NSLLDM+G+ NLR VEK WKEMKRRK+ PD+V+YT+VI+AYN+A+E
Sbjct: 319 NSLLDMHGRVKNLRQVEKLWKEMKRRKVAPDKVTYTSVIAAYNKAKE 365
>ref|XP_002314741.2| hypothetical protein POPTR_0010s10900g [Populus trichocarpa]
gi|550329541|gb|EEF00912.2| hypothetical protein
POPTR_0010s10900g [Populus trichocarpa]
Length = 582
Score = 150 bits (379), Expect = 9e-41
Identities = 71/107 (66%), Positives = 85/107 (79%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+AEMVFSEME+KG+ C K GR RDA RLVAKMK +GCEPNVWIY
Sbjct: 392 GLYSKAEMVFSEMEEKGFDKCVVAYSSMISMYGKTGRARDATRLVAKMKLKGCEPNVWIY 451
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NSLLDM+G+A NLR VEK WKEMKRRK+ PD+V+Y++VISAYN+++E
Sbjct: 452 NSLLDMHGRAKNLRQVEKLWKEMKRRKVAPDKVTYSSVISAYNKSKE 498
>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
Length = 552
Score = 149 bits (376), Expect = 2e-40
Identities = 69/104 (66%), Positives = 85/104 (81%)
Frame = +1
Query: 4 LYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIYN 183
LYS+AEMVFSEMEKKG++ C K GR R+A+RLVAKMK+RGCEPNVW+YN
Sbjct: 352 LYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYN 411
Query: 184 SLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRA 315
SL+DM+G+ NLR VEK WKEMKR+K++PDRVSYT+VISAY++A
Sbjct: 412 SLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKA 455
>ref|XP_006470889.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Citrus sinensis]
Length = 603
Score = 149 bits (377), Expect = 2e-40
Identities = 72/107 (67%), Positives = 83/107 (77%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+AE VF EM+ KG+ C K GR RDA+RLVAKMK +GCEPNVWIY
Sbjct: 413 GLYSKAEKVFIEMQLKGFDKCVVAYSTMVAMYGKTGRIRDAMRLVAKMKAKGCEPNVWIY 472
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NSL+DM+G+A NLR VEK WKEM+RRK+ PD+VSYTTVISAYNRARE
Sbjct: 473 NSLMDMHGRAKNLRQVEKLWKEMERRKVTPDKVSYTTVISAYNRARE 519
>ref|XP_015167622.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Solanum tuberosum]
Length = 648
Score = 150 bits (378), Expect = 2e-40
Identities = 70/107 (65%), Positives = 85/107 (79%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS AEMVFSEME+KG+ C K GR +DA++LVA MK+RGC+PNVW+Y
Sbjct: 458 GLYSNAEMVFSEMEQKGFDKCVVAYSSMIAMYGKTGRPKDAMKLVAIMKERGCQPNVWVY 517
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
N+LLD++GK LNLR VEK WKEMKRRKI PDRVSYT++ISAY++ARE
Sbjct: 518 NALLDIHGKVLNLRQVEKVWKEMKRRKIFPDRVSYTSIISAYSKARE 564
>ref|XP_009601923.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Nicotiana tomentosiformis]
Length = 619
Score = 149 bits (377), Expect = 2e-40
Identities = 70/107 (65%), Positives = 85/107 (79%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS AEMVFSEME+KG+ C K R +DA++LVAKMK+RGC+PNVW+Y
Sbjct: 429 GLYSNAEMVFSEMEQKGFDKCVVAYSSMIAMYGKTERPKDAMKLVAKMKERGCQPNVWVY 488
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
N+LLD++GK LNLR VEK WKEMKRRKI PDRVSYT++I+AY+RARE
Sbjct: 489 NALLDIHGKVLNLRQVEKIWKEMKRRKIFPDRVSYTSIITAYSRARE 535
>ref|XP_004237182.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Solanum lycopersicum]
Length = 642
Score = 149 bits (377), Expect = 3e-40
Identities = 70/107 (65%), Positives = 85/107 (79%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS AEMVFSEME+KG+ C K GR +DA++LVA MK+RGC+PNVW+Y
Sbjct: 452 GLYSNAEMVFSEMEQKGFDKCVVAYSSMIAMYGKTGRPKDAMKLVAIMKERGCQPNVWVY 511
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
N+LLD++GK LNLR VEK WKEMKRRKI PDRVSYT++ISAY++ARE
Sbjct: 512 NALLDIHGKVLNLRQVEKIWKEMKRRKIFPDRVSYTSIISAYSKARE 558
>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Vitis vinifera]
Length = 603
Score = 149 bits (376), Expect = 3e-40
Identities = 69/104 (66%), Positives = 85/104 (81%)
Frame = +1
Query: 4 LYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIYN 183
LYS+AEMVFSEMEKKG++ C K GR R+A+RLVAKMK+RGCEPNVW+YN
Sbjct: 414 LYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCEPNVWVYN 473
Query: 184 SLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRA 315
SL+DM+G+ NLR VEK WKEMKR+K++PDRVSYT+VISAY++A
Sbjct: 474 SLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKA 517
>ref|XP_015073573.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic [Solanum pennellii]
Length = 646
Score = 149 bits (377), Expect = 3e-40
Identities = 70/107 (65%), Positives = 85/107 (79%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS AEMVFSEME+KG+ C K GR +DA++LVA MK+RGC+PNVW+Y
Sbjct: 456 GLYSNAEMVFSEMEQKGFDKCVVAYSSMIAMYGKTGRPKDAMKLVAIMKERGCQPNVWVY 515
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
N+LLD++GK LNLR VEK WKEMKRRKI PDRVSYT++ISAY++ARE
Sbjct: 516 NALLDIHGKVLNLRQVEKIWKEMKRRKIFPDRVSYTSIISAYSKARE 562
>ref|XP_015576450.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g13770, chloroplastic [Ricinus communis]
Length = 557
Score = 148 bits (374), Expect = 3e-40
Identities = 70/107 (65%), Positives = 84/107 (78%)
Frame = +1
Query: 1 GLYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIY 180
GLYS+AEMVF EM+ KG+ C K GRTRDA+RLVAKMK +GCEPNVWIY
Sbjct: 367 GLYSKAEMVFLEMQGKGFDKCVVAYSSIVAMYGKTGRTRDAMRLVAKMKVKGCEPNVWIY 426
Query: 181 NSLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
NSLLDM+G+ NLR VEK WKEMKRRK+ PD+V+YT+VI+AYN+A+E
Sbjct: 427 NSLLDMHGRVKNLRQVEKLWKEMKRRKVAPDKVTYTSVIAAYNKAKE 473
>gb|ABK95746.1| unknown [Populus trichocarpa]
Length = 184
Score = 138 bits (347), Expect = 2e-39
Identities = 65/100 (65%), Positives = 78/100 (78%)
Frame = +1
Query: 22 MVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIYNSLLDMN 201
MVFSEME+KG+ C K GR RDA RLVAKMK +GCEPNVWIYNSLLDM+
Sbjct: 1 MVFSEMEEKGFDKCVVAYSSMISMYGKTGRARDATRLVAKMKLKGCEPNVWIYNSLLDMH 60
Query: 202 GKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRARE 321
G+A NLR VEK WKEMKRRK+ PD+V+Y++VISAYN+++E
Sbjct: 61 GRAKNLRQVEKLWKEMKRRKVAPDKVTYSSVISAYNKSKE 100
>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 146 bits (369), Expect = 2e-39
Identities = 67/104 (64%), Positives = 85/104 (81%)
Frame = +1
Query: 4 LYSRAEMVFSEMEKKGYHNCXXXXXXXXXXXXKMGRTRDAIRLVAKMKQRGCEPNVWIYN 183
LYS+AEM+FSEMEKKG++ C K GR R+A+RLVAKMK+RGC+PNVW+YN
Sbjct: 338 LYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMRLVAKMKERGCKPNVWVYN 397
Query: 184 SLLDMNGKALNLRLVEKTWKEMKRRKILPDRVSYTTVISAYNRA 315
SL+DM+G+ NLR VEK WKEMKR+K++PDRVSYT+VISAY++A
Sbjct: 398 SLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAYSKA 441