BLASTX nr result

ID: Rehmannia28_contig00020711 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00020711
         (307 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011079290.1| PREDICTED: ribosomal RNA processing protein ...    88   2e-18
ref|XP_012857394.1| PREDICTED: ribosomal RNA processing protein ...    85   3e-17
gb|EPS63397.1| hypothetical protein M569_11388 [Genlisea aurea]        67   6e-11
emb|CDP21879.1| unnamed protein product [Coffea canephora]             64   3e-10
emb|CDP02991.1| unnamed protein product [Coffea canephora]             62   2e-09

>ref|XP_011079290.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Sesamum
           indicum]
          Length = 576

 Score = 88.2 bits (217), Expect = 2e-18
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = -3

Query: 137 MRKRPREPKPILPVLASATGPALIKHLASCNTTVRSQALRLLQSW 3
           M+KRPREPKP+LP LASATGPALIKHLASCNTTVRSQ+LRLLQSW
Sbjct: 1   MKKRPREPKPLLPFLASATGPALIKHLASCNTTVRSQSLRLLQSW 45


>ref|XP_012857394.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Erythranthe
           guttata] gi|604301183|gb|EYU20903.1| hypothetical
           protein MIMGU_mgv1a003648mg [Erythranthe guttata]
          Length = 572

 Score = 84.7 bits (208), Expect = 3e-17
 Identities = 40/45 (88%), Positives = 42/45 (93%)
 Frame = -3

Query: 137 MRKRPREPKPILPVLASATGPALIKHLASCNTTVRSQALRLLQSW 3
           M+KR REPKPILP LASATGP LIKHLASCNTTVRSQ+LRLLQSW
Sbjct: 1   MKKRAREPKPILPALASATGPGLIKHLASCNTTVRSQSLRLLQSW 45


>gb|EPS63397.1| hypothetical protein M569_11388 [Genlisea aurea]
          Length = 521

 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 32/45 (71%), Positives = 37/45 (82%)
 Frame = -3

Query: 137 MRKRPREPKPILPVLASATGPALIKHLASCNTTVRSQALRLLQSW 3
           M+KRPRE KP  P L SA GPALIK+LASCN  VRSQ+L+L+QSW
Sbjct: 1   MKKRPRERKPSHPSLESAAGPALIKYLASCNPRVRSQSLQLIQSW 45


>emb|CDP21879.1| unnamed protein product [Coffea canephora]
          Length = 259

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 28/49 (57%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 SSMRKRPR--EPKPILPVLASATGPALIKHLASCNTTVRSQALRLLQSW 3
           S+M+K+PR  +PKP L  L++  GP+LIKHLASCN ++RSQ+L+L+Q+W
Sbjct: 63  STMKKKPRTPKPKPFLATLSALPGPSLIKHLASCNASIRSQSLKLIQAW 111


>emb|CDP02991.1| unnamed protein product [Coffea canephora]
          Length = 589

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 27/47 (57%), Positives = 39/47 (82%), Gaps = 2/47 (4%)
 Frame = -3

Query: 137 MRKRPR--EPKPILPVLASATGPALIKHLASCNTTVRSQALRLLQSW 3
           M+K+PR  +PKP L  L++  GP+LIKHLASCN ++RSQ+L+L+Q+W
Sbjct: 1   MKKKPRTPKPKPFLATLSALPGPSLIKHLASCNASIRSQSLKLIQAW 47


Top