BLASTX nr result
ID: Rehmannia28_contig00020640
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00020640
(300 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011093520.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Se... 126 6e-32
emb|CDO99648.1| unnamed protein product [Coffea canephora] 108 2e-25
ref|XP_015062044.1| PREDICTED: pre-mRNA-splicing factor SYF1 [So... 106 9e-25
ref|XP_002521433.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Ri... 105 1e-24
ref|XP_015888127.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Zi... 104 2e-24
ref|XP_006345465.1| PREDICTED: pre-mRNA-splicing factor SYF1 [So... 104 3e-24
gb|EPS74007.1| hypothetical protein M569_00744 [Genlisea aurea] 103 8e-24
ref|XP_004229617.1| PREDICTED: pre-mRNA-splicing factor SYF1 [So... 103 8e-24
ref|XP_009802891.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Ni... 101 4e-23
ref|XP_006467884.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Ci... 101 4e-23
ref|XP_009612309.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Ni... 101 5e-23
ref|XP_006449232.1| hypothetical protein CICLE_v10014187mg [Citr... 100 1e-22
ref|XP_010092624.1| Pre-mRNA-splicing factor SYF1 [Morus notabil... 99 2e-22
ref|XP_012844711.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Er... 99 4e-22
ref|XP_011001120.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Po... 98 6e-22
ref|XP_002305003.1| transcription-coupled DNA repair family prot... 98 6e-22
ref|XP_012444870.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Go... 98 6e-22
gb|KHG20769.1| Pre-mRNA-splicing factor SYF1 [Gossypium arboreum] 97 1e-21
ref|XP_010057541.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Eu... 97 1e-21
ref|XP_004134724.2| PREDICTED: pre-mRNA-splicing factor SYF1 [Cu... 96 4e-21
>ref|XP_011093520.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Sesamum indicum]
Length = 911
Score = 126 bits (317), Expect = 6e-32
Identities = 68/89 (76%), Positives = 74/89 (83%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQM T LEE+KDVLKKAGM +DEM ALERQLVPSAN+ TA D
Sbjct: 759 SASYSQTHFILPEYLMQKDQMQT-LEEAKDVLKKAGMADDEMAALERQLVPSANETTAND 817
Query: 118 TSRRLGFESAGVQNGGESTTNGNREDVTL 32
T RRLGF SAG+QNGGE T N+ED+ L
Sbjct: 818 TGRRLGFVSAGLQNGGE--TMANKEDIEL 844
>emb|CDO99648.1| unnamed protein product [Coffea canephora]
Length = 926
Score = 108 bits (269), Expect = 2e-25
Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQM T LEE+KDVLKKAG+ +D+M ALE++L+PSAND KD
Sbjct: 771 SASYSQTHFILPEYLMQKDQMQT-LEEAKDVLKKAGVADDQMAALEKKLLPSANDAVTKD 829
Query: 118 TSRRLGFESAGVQNGGESTTNG--NREDVTL 32
++R LGF SAGVQ+ G+ N+ED+ L
Sbjct: 830 SNRVLGFVSAGVQSVGDGAPKDTENKEDIEL 860
>ref|XP_015062044.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Solanum pennellii]
Length = 916
Score = 106 bits (264), Expect = 9e-25
Identities = 57/89 (64%), Positives = 64/89 (71%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQM T LEE+KDVLKKAG+ +DEM ALERQLVP ND +K+
Sbjct: 762 SASYSQTHFILPEYLMQKDQMQT-LEEAKDVLKKAGIADDEMAALERQLVPPENDTKSKE 820
Query: 118 TSRRLGFESAGVQNGGESTTNGNREDVTL 32
SR +GF SAGV N ED+ L
Sbjct: 821 ESRVVGFVSAGVVESNGQKVTANNEDIEL 849
>ref|XP_002521433.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Ricinus communis]
gi|223539332|gb|EEF40923.1| XPA-binding protein, putative
[Ricinus communis]
Length = 916
Score = 105 bits (263), Expect = 1e-24
Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ ++E+KD LK AG+ EDEM ALERQL P AN++TAKD
Sbjct: 760 SASYSQTHFILPEYLMQKDQ-RLNIDEAKDKLKLAGVPEDEMAALERQLAPVANNNTAKD 818
Query: 118 TSRRLGFESAGV--QNGGESTTNGNREDVTL 32
+SR++GF SAGV QN G N N+ED+ L
Sbjct: 819 SSRKVGFVSAGVESQNDGVIKVNANQEDIEL 849
>ref|XP_015888127.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Ziziphus jujuba]
Length = 545
Score = 104 bits (260), Expect = 2e-24
Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 4/92 (4%)
Frame = -3
Query: 295 ASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSAND-DTAKD 119
ASYSQTHFILPE LM KDQ L+E+KD LK+AG+ EDEM ALERQL+P+AND TAKD
Sbjct: 399 ASYSQTHFILPEYLMQKDQ-RLDLDEAKDKLKQAGLPEDEMAALERQLIPAANDTTTAKD 457
Query: 118 TSRRLGFESAGVQ---NGGESTTNGNREDVTL 32
+SR++GF SAGVQ +GG +TT NRED+ L
Sbjct: 458 SSRKVGFVSAGVQPEADGGITTT--NREDIEL 487
>ref|XP_006345465.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Solanum tuberosum]
Length = 915
Score = 104 bits (260), Expect = 3e-24
Identities = 56/89 (62%), Positives = 63/89 (70%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQM T LEE+KDVLKKAG+ +DEM ALERQL P ND +K+
Sbjct: 761 SASYSQTHFILPEYLMQKDQMQT-LEEAKDVLKKAGVADDEMAALERQLAPPENDTKSKE 819
Query: 118 TSRRLGFESAGVQNGGESTTNGNREDVTL 32
SR +GF SAGV N ED+ L
Sbjct: 820 QSRVVGFVSAGVVESNGQKVTANNEDIEL 848
>gb|EPS74007.1| hypothetical protein M569_00744 [Genlisea aurea]
Length = 908
Score = 103 bits (257), Expect = 8e-24
Identities = 59/91 (64%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE L+ KDQM T+LEE+KDVLKKAG+ EDEM ALERQ++P DD
Sbjct: 755 SASYSQTHFILPEYLLQKDQMQTSLEEAKDVLKKAGIEEDEMAALERQVLP--KDDAVVG 812
Query: 118 TSRRLGFESAGVQNGGESTTNG--NREDVTL 32
RLGF S GVQNGGE T N+ED+ L
Sbjct: 813 ---RLGFVSGGVQNGGEMTKAAAVNKEDIEL 840
>ref|XP_004229617.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Solanum lycopersicum]
Length = 916
Score = 103 bits (257), Expect = 8e-24
Identities = 56/89 (62%), Positives = 63/89 (70%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQM T LEE+KDVLKKAG+ +DEM ALERQLVP N +K+
Sbjct: 762 SASYSQTHFILPEYLMQKDQMQT-LEEAKDVLKKAGIADDEMAALERQLVPPENGTKSKE 820
Query: 118 TSRRLGFESAGVQNGGESTTNGNREDVTL 32
SR +GF SAGV N ED+ L
Sbjct: 821 ESRVVGFVSAGVVESNGQKVTANNEDIEL 849
>ref|XP_009802891.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Nicotiana sylvestris]
Length = 914
Score = 101 bits (252), Expect = 4e-23
Identities = 55/89 (61%), Positives = 63/89 (70%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQM T LEE+KDVLKKAG+ +DEM ALERQLVP ++ K+
Sbjct: 762 SASYSQTHFILPEYLMQKDQMQT-LEEAKDVLKKAGVADDEMAALERQLVPPEDETKGKE 820
Query: 118 TSRRLGFESAGVQNGGESTTNGNREDVTL 32
SR +GF SAGV N ED+ L
Sbjct: 821 QSRVVGFVSAGVVESNGQKVTTNNEDIEL 849
>ref|XP_006467884.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Citrus sinensis]
gi|641856996|gb|KDO75762.1| hypothetical protein
CISIN_1g002477mg [Citrus sinensis]
Length = 917
Score = 101 bits (252), Expect = 4e-23
Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ +++++KD LK+AG+ EDEM ALERQL P+AN+ AKD
Sbjct: 763 SASYSQTHFILPEYLMQKDQ-RLSIDDAKDKLKQAGVHEDEMAALERQLAPAANNGNAKD 821
Query: 118 TSRRLGFESAGV--QNGGESTTNGNREDVTL 32
+SR++GF SAGV Q G T N ED+ L
Sbjct: 822 SSRKVGFVSAGVESQTDGGIKTTANHEDIEL 852
>ref|XP_009612309.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Nicotiana tomentosiformis]
Length = 914
Score = 101 bits (251), Expect = 5e-23
Identities = 55/89 (61%), Positives = 63/89 (70%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQM T LEE+KDVLKKAG+ +DEM ALERQLVP ++ K+
Sbjct: 762 SASYSQTHFILPEYLMQKDQMQT-LEEAKDVLKKAGVADDEMAALERQLVPPEDEAKGKE 820
Query: 118 TSRRLGFESAGVQNGGESTTNGNREDVTL 32
SR +GF SAGV N ED+ L
Sbjct: 821 QSRVVGFVSAGVVESNGQKVTTNNEDIEL 849
>ref|XP_006449232.1| hypothetical protein CICLE_v10014187mg [Citrus clementina]
gi|557551843|gb|ESR62472.1| hypothetical protein
CICLE_v10014187mg [Citrus clementina]
Length = 916
Score = 100 bits (248), Expect = 1e-22
Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ +++++KD LK+AG+ EDEM ALERQL P+AN+ A+D
Sbjct: 762 SASYSQTHFILPEYLMQKDQ-RLSIDDAKDKLKQAGVHEDEMAALERQLAPAANNGNAED 820
Query: 118 TSRRLGFESAGV--QNGGESTTNGNREDVTL 32
+SR++GF SAGV Q G T N ED+ L
Sbjct: 821 SSRKVGFVSAGVESQTDGGIKTTANHEDIEL 851
>ref|XP_010092624.1| Pre-mRNA-splicing factor SYF1 [Morus notabilis]
gi|587861990|gb|EXB51813.1| Pre-mRNA-splicing factor SYF1
[Morus notabilis]
Length = 915
Score = 99.4 bits (246), Expect = 2e-22
Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ +L+++KD LK+AG+ EDEM ALERQL P+AND TA+D
Sbjct: 766 SASYSQTHFILPEYLMQKDQT-VSLDDAKDKLKQAGVTEDEMAALERQLAPAANDTTARD 824
Query: 118 TSRRLGFESAGV--QNGGESTTNGNREDVTL 32
++R++GF SAG Q + + N ED+ L
Sbjct: 825 SNRKVGFVSAGTESQPNADIRSTANAEDIEL 855
>ref|XP_012844711.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Erythranthe guttata]
gi|604320379|gb|EYU31359.1| hypothetical protein
MIMGU_mgv1a0010071mg [Erythranthe guttata]
Length = 914
Score = 98.6 bits (244), Expect = 4e-22
Identities = 60/95 (63%), Positives = 72/95 (75%), Gaps = 6/95 (6%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLV-PSANDDTAK 122
SASYSQTHFILPE LM KDQ+ T LEE+KDVLKKAG+G+DEMEALER+L+ PS + A
Sbjct: 757 SASYSQTHFILPEYLMQKDQLQT-LEEAKDVLKKAGVGDDEMEALERRLLPPSGGGELAV 815
Query: 121 DTS---RRLGFESAGVQ--NGGESTTNGNREDVTL 32
S +R+GF SAG Q +GGE T GNRE++ L
Sbjct: 816 KESGGRKRVGFVSAGTQQKDGGEDET-GNREEIEL 849
>ref|XP_011001120.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Populus euphratica]
Length = 908
Score = 98.2 bits (243), Expect = 6e-22
Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 3/92 (3%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ ++++KD LK+AG+ EDEM ALERQL P+ N TA+D
Sbjct: 760 SASYSQTHFILPEYLMQKDQ-RLNIDDAKDKLKQAGLPEDEMAALERQLAPAINKTTARD 818
Query: 118 TSRRLGFESAGVQ---NGGESTTNGNREDVTL 32
+SR +GF SAGVQ +GG T N+ED+ L
Sbjct: 819 SSRTVGFVSAGVQSQSDGGMQVT-ANQEDIEL 849
>ref|XP_002305003.1| transcription-coupled DNA repair family protein [Populus trichocarpa]
gi|222847967|gb|EEE85514.1| transcription-coupled DNA
repair family protein [Populus trichocarpa]
Length = 908
Score = 98.2 bits (243), Expect = 6e-22
Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 3/92 (3%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ ++++KD LK+AG+ EDEM ALERQL P+ N TA+D
Sbjct: 760 SASYSQTHFILPEYLMQKDQ-RLNIDDAKDKLKQAGLPEDEMAALERQLAPAINKTTARD 818
Query: 118 TSRRLGFESAGVQ---NGGESTTNGNREDVTL 32
+SR +GF SAGVQ +GG T N+ED+ L
Sbjct: 819 SSRTVGFVSAGVQSQSDGGMQVT-ANQEDIEL 849
>ref|XP_012444870.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Gossypium raimondii]
gi|763790640|gb|KJB57636.1| hypothetical protein
B456_009G172900 [Gossypium raimondii]
Length = 913
Score = 98.2 bits (243), Expect = 6e-22
Identities = 55/92 (59%), Positives = 70/92 (76%), Gaps = 3/92 (3%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ ++E+KD +K+AG+ EDEM ALERQL+P+A++ AKD
Sbjct: 761 SASYSQTHFILPEYLMQKDQ---NIDEAKDKMKQAGISEDEMAALERQLLPAADNAIAKD 817
Query: 118 TSRRLGFESAGVQ---NGGESTTNGNREDVTL 32
SR++GF SAGV+ +GG TT N ED+ L
Sbjct: 818 NSRKVGFVSAGVESQADGGLKTT-ANLEDIDL 848
>gb|KHG20769.1| Pre-mRNA-splicing factor SYF1 [Gossypium arboreum]
Length = 915
Score = 97.4 bits (241), Expect = 1e-21
Identities = 54/92 (58%), Positives = 70/92 (76%), Gaps = 3/92 (3%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ ++E+KD +K+AG+ EDEM ALERQ++P+A++ AKD
Sbjct: 763 SASYSQTHFILPEYLMQKDQ---NIDEAKDKMKQAGISEDEMAALERQILPAADNAIAKD 819
Query: 118 TSRRLGFESAGVQ---NGGESTTNGNREDVTL 32
SR++GF SAGV+ +GG TT N ED+ L
Sbjct: 820 NSRKVGFVSAGVESQADGGLKTT-ANLEDIDL 850
>ref|XP_010057541.1| PREDICTED: pre-mRNA-splicing factor SYF1 [Eucalyptus grandis]
gi|629109579|gb|KCW74725.1| hypothetical protein
EUGRSUZ_E03448 [Eucalyptus grandis]
Length = 921
Score = 97.4 bits (241), Expect = 1e-21
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE +M KDQ L++++D LK+AG+ EDEM ALERQL PSAND K+
Sbjct: 771 SASYSQTHFILPEYVMQKDQK-MDLDDARDKLKQAGVSEDEMAALERQLAPSANDIATKE 829
Query: 118 TSRRLGFESAGV--QNGGESTTNGNREDVTL 32
SR++GF SAGV Q G +N N ED+ L
Sbjct: 830 ASRKVGFVSAGVESQADGGLRSNVNNEDIEL 860
>ref|XP_004134724.2| PREDICTED: pre-mRNA-splicing factor SYF1 [Cucumis sativus]
gi|700193993|gb|KGN49197.1| hypothetical protein
Csa_6G517050 [Cucumis sativus]
Length = 913
Score = 95.9 bits (237), Expect = 4e-21
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
Frame = -3
Query: 298 SASYSQTHFILPECLMLKDQMHTTLEESKDVLKKAGMGEDEMEALERQLVPSANDDTAKD 119
SASYSQTHFILPE LM KDQ L+E+KD LK+AG+ EDEM ALERQL P A +DTAKD
Sbjct: 766 SASYSQTHFILPEYLMQKDQT-MNLDEAKDKLKQAGVTEDEMAALERQLAP-AIEDTAKD 823
Query: 118 TSRRLGFESAGV--QNGGESTTNGNREDVTL 32
R++GF SAGV Q GE ++ED+ L
Sbjct: 824 NGRKVGFVSAGVESQADGELKVTAHQEDIEL 854