BLASTX nr result

ID: Rehmannia28_contig00020554 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00020554
         (1312 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_817244.1| ORF45d [Pinus koraiensis] gi|29469761|gb|AAO740...    60   2e-08
ref|YP_001152161.1| ORF49g [Pinus koraiensis] gi|145048790|gb|AB...    60   2e-08
ref|XP_003615432.1| hypothetical protein MTR_5g067940 [Medicago ...    45   6e-07
gb|KMS96934.1| hypothetical protein BVRB_7g180160 [Beta vulgaris...    55   1e-06

>ref|NP_817244.1| ORF45d [Pinus koraiensis] gi|29469761|gb|AAO74089.1| ORF45d [Pinus
           koraiensis]
          Length = 45

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 104 LTMCQEPDLNW*HEDFQSSALPAELSRPFPM*YP 205
           LT CQEPDLNW HEDFQSSALP ELSR FP+ +P
Sbjct: 8   LTSCQEPDLNWWHEDFQSSALPTELSRLFPVDHP 41


>ref|YP_001152161.1| ORF49g [Pinus koraiensis] gi|145048790|gb|ABP35408.1| ORF49g [Pinus
           koraiensis]
          Length = 49

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -3

Query: 644 DENKDRVPFYMSISTTMKFLVRGKSVDFKNREGSSPSIP 528
           DE+KDRV FYMS+STTM+  V GKSV F +REGSSPSIP
Sbjct: 3   DEDKDRVQFYMSMSTTMQIAVGGKSVGFIDREGSSPSIP 41


>ref|XP_003615432.1| hypothetical protein MTR_5g067940 [Medicago truncatula]
            gi|355516767|gb|AES98390.1| hypothetical protein
            MTR_5g067940 [Medicago truncatula]
          Length = 69

 Score = 45.4 bits (106), Expect(3) = 6e-07
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -2

Query: 1077 MAKSVDATDLIGLSLGMETY*VITFKF 997
            MA+ VDATDLIGLSLGMETY V TFKF
Sbjct: 1    MAELVDATDLIGLSLGMETYQVKTFKF 27



 Score = 30.0 bits (66), Expect(3) = 6e-07
 Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = -1

Query: 955 NKGSKNENKG-IGAETQWKMF 896
           NK  ++ENK  IGAETQWK+F
Sbjct: 49  NKSLESENKKRIGAETQWKLF 69



 Score = 26.9 bits (58), Expect(3) = 6e-07
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -3

Query: 992 KMGNPEPNPVF 960
           KMGNPEPNP F
Sbjct: 34  KMGNPEPNPSF 44


>gb|KMS96934.1| hypothetical protein BVRB_7g180160 [Beta vulgaris subsp. vulgaris]
          Length = 36

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 614 MSISTTMKFLVRGKSVDFKNREGSSPSIPK 525
           MSI TTMKF+VRG+SVDFKNREGSSPSI K
Sbjct: 1   MSILTTMKFIVRGRSVDFKNREGSSPSISK 30


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