BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00020063
         (1504 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH88997.1| Nucleotide-binding, alpha-beta plait, partial [Cy...    40   4e-06

>gb|KVH88997.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
            var. scolymus]
          Length = 349

 Score = 40.4 bits (93), Expect(3) = 4e-06
 Identities = 28/84 (33%), Positives = 39/84 (46%)
 Frame = +3

Query: 1146 SLFSIPSVAISPVW*WWI*VHHAMLPQL**GVNVSVQNAMPTTLILWRTMSSIMPCHPFT 1325
            SL S+P  AIS    WW                  + +AMP+       M+SI+PC PF 
Sbjct: 28   SLASLP--AISQGLSWW-----------------DLYHAMPSITYPKGVMNSILPCLPFL 68

Query: 1326 EHCCETGEQ*LAMTTQLPMDLALI 1397
              CC+ GE  LA+ + L + L +I
Sbjct: 69   NTCCQNGEPCLAVISDLRLGLNVI 92



 Score = 32.0 bits (71), Expect(3) = 4e-06
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +1

Query: 1414 HLSLVHHARPLHGYFHQ-----NLHIFAGFAFVYF 1503
            H  L+  AR LH Y HQ      L + AGFAFVY+
Sbjct: 96   HHDLLDLARLLHPYVHQLFSCLTLFVLAGFAFVYY 130



 Score = 26.9 bits (58), Expect(3) = 4e-06
 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +2

Query: 1091 NLSTCQLS-YTQMELFYISF 1147
            NLS C  S Y+QME FYISF
Sbjct: 3    NLSACLPSFYSQMESFYISF 22