BLASTX nr result
ID: Rehmannia28_contig00019898
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00019898
(4861 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 897 0.0
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 882 0.0
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo... 865 0.0
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 861 0.0
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 851 0.0
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo... 859 0.0
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 874 0.0
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera] 855 0.0
gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposo... 797 0.0
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 827 0.0
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera] 794 0.0
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 810 0.0
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 800 0.0
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 744 0.0
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 774 0.0
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 763 0.0
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo... 720 0.0
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 733 0.0
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera] 739 0.0
gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposo... 743 0.0
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 897 bits (2319), Expect(2) = 0.0
Identities = 510/1327 (38%), Positives = 741/1327 (55%), Gaps = 20/1327 (1%)
Frame = +2
Query: 224 PFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDSNSPDYDN 403
P+ L ++++P +SLVS+PL +NYL+W ++ML+ LG K KL FI+G + P + D
Sbjct: 14 PYFLPSNENPSISLVSAPLNDHNYLSWSQSMLLVLGTKNKLAFIDGSLARPVTAGVDQTA 73
Query: 404 WKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEISNLT 583
W + + +V +WI+ SL ++ + I++ +A ++WNDL +R+ + + + ++ +EI +L
Sbjct: 74 WDRCNKLVISWIVQSLDTSLIPSVIWMPTASQIWNDLKKRYYQGDAFRISELLEEIYSLK 133
Query: 584 QGNSSVAVYFTKLKKLWDEYSSLVSWPTCTCGTVKQIMEMESHSKLIKFLMGLNDAFDGA 763
QGN S+ YFT L+ LW E P+CTC T + + I+FL GLN+ +
Sbjct: 134 QGNMSITHYFTTLQGLWQELDHFCPIPSCTCFTTECV---------IRFLKGLNEQYSNV 184
Query: 764 RSQILLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVENSALLSKTTGHEKPYIPXXXXX 943
RSQ++LM+PLPS+ K +SM+++ ER+ T ++ +L+ T+ +E+
Sbjct: 185 RSQVMLMDPLPSVQKVFSMILQQEREFHGT-------NDNQVLAVTSNNER--------- 228
Query: 944 XXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHGYPDWFKQLKEQRRLGLKP 1123
K ++ +C HCG GH V C+K HG P Q K R +
Sbjct: 229 ----NNYKGSKTFKRNKDYNTKVCSHCGRIGHLVDSCYKKHGPP---LQHKHGRIVNQYQ 281
Query: 1124 VANLAETDHKNTT---KAITENSSDKGLQLGGISTLIQQEIAKYPCQQKSGGNIGNTEYG 1294
+ +TD + + ++ NS G + T Q + QQ G+T
Sbjct: 282 SVSDEDTDDDQSVHSQRVVSHNS-------GNMFTPEQHQALLALLQQS-----GSTS-S 328
Query: 1295 HTYAHFAEYAGTFTSDDTHFALTASENLDKGSWILDTSASRHMCNNPSFMTDLNPVNTHI 1474
H+ A + + L+ + + WI+DT A+ H+C N +F + I
Sbjct: 329 HSVNQLAGPSILSSPKPPGMILSFPYSHNSDCWIIDTGATDHVCKNINFFQSYRRIKP-I 387
Query: 1475 TVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVPSFKYNLLSISYLIQKCNLKCIFYPSHC 1654
+ P+GS SG V L+ + LTDVL +P+F +NL+S+S L + + F S C
Sbjct: 388 LIQLPNGSQVSTCVSGTVLLSKTCYLTDVLFIPNFHFNLISVSKLAKTLSCTLTFSDSDC 447
Query: 1655 LIQDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSL 1834
IQ ++G A + + A SS + TS D+WH RLGH S
Sbjct: 448 QIQ--ANHSMRMIGAAELRAGLYAMVSSPESNVVHHCTSHFFTYQSDLWHLRLGHLSHDK 505
Query: 1835 LEHLPFLKP--LCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYS 2008
L L P CN K ++ C +CH+AK RLPFP S + + N+FDL+H+DIWGP S
Sbjct: 506 LSALKGSYPEIQCN---KISLP-CEICHLAKHKRLPFPDSLTKSENVFDLIHVDIWGPLS 561
Query: 2009 SSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGA 2188
+ + Y LTIVDD SR W++ M +K + LL+NF+ V+ QF N+K+ R+DNG+
Sbjct: 562 VASIFGHKYFLTIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKTIRTDNGS 621
Query: 2189 EFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFS 2368
EF+ +D + GI+HQ SCV TPQQNG+VERKH+H+L + R LMFQS + FW ++
Sbjct: 622 EFL---LKDWYAKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYA 678
Query: 2369 LLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYK 2548
+ A ++INRLPT L SPY VLYS P++S LK FGCL +++ ++ K PR K
Sbjct: 679 IGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRK 738
Query: 2549 CIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAIS----PLTPLPQVPIT 2716
C+FLGY G KGF +Y+L T++ +SRDV F+E+ FP +I P+ P+ Q+P+T
Sbjct: 739 CMFLGYSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLT 798
Query: 2717 SSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXX----------RASSRISKPPG 2866
S D + + H + ETE R S R+ PG
Sbjct: 799 SCDPIPSHTHDN---LDETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPG 855
Query: 2867 WLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSF-PYTISPLFHSTYVSFLANVST 3043
+L DY + AA K D T +PI + PYT + + SF++ +S+
Sbjct: 856 YLQDY--------HCTLAASKVDQSSSTAR--YPISDYLPYTS---YSAVQQSFVSTISS 902
Query: 3044 TKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGS 3223
EP SY A W EA+ ELDAL+ +TW + DLPP K +GC+WVFKVK + DGS
Sbjct: 903 IIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGS 962
Query: 3224 VDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHG 3403
V+RYKARLVAKG+ Q+ G+DY D FSPV +M T+R+ +AIA NWS+HQLDIN AFLHG
Sbjct: 963 VERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHG 1022
Query: 3404 HLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPC 3583
L E YM PP G P +VC L+KSLYGLKQASRQWN +L + L FG QS D
Sbjct: 1023 DLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYS 1082
Query: 3584 LFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARG 3763
LF + F+A+L+YVDD++++GS++ +I +K LD F+IKDLG YFLG+E +R
Sbjct: 1083 LFTKRTNIGFIAILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRS 1142
Query: 3764 SAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLY 3943
G + QRKY L++L D G+L KP TP+ +L +P YR L+GRL+Y
Sbjct: 1143 DQGISVCQRKYALELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIY 1202
Query: 3944 LNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCD 4123
L TRPD+ ++V +LSQF++ P H+ AA ++RY+K P+ GLF+ SSS L LT Y D
Sbjct: 1203 LTHTRPDLAFAVGKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTD 1262
Query: 4124 ADWGSCP 4144
+DW +CP
Sbjct: 1263 SDWATCP 1269
Score = 166 bits (419), Expect(2) = 0.0
Identities = 85/153 (55%), Positives = 108/153 (70%)
Frame = +1
Query: 4141 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 4320
PD+R+SI+G+C LG L+SWK KKQ VS+SS+EAEYRAL+ VCE WL L DF L
Sbjct: 1269 PDSRRSISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQL 1328
Query: 4321 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 4500
+P+ LFCDNQ+AL+I ANPVFHERTKH++IDCH VR++ + FI I+S+ QLAD
Sbjct: 1329 QDLIPISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLAD 1388
Query: 4501 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGGV 4599
ILTK L + KLG+ + + PSLR GV
Sbjct: 1389 ILTKPLLPKMFQDFVCKLGLSNF-TTPSLREGV 1420
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 882 bits (2280), Expect(2) = 0.0
Identities = 526/1354 (38%), Positives = 726/1354 (53%), Gaps = 48/1354 (3%)
Frame = +2
Query: 224 PFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDSNSPDYDN 403
P L +SD PG LVS PL +NY TW ++M +AL K K GF++G + P N +
Sbjct: 31 PLFLHHSDQPGAVLVSQPLMEDNYTTWVQSMDMALTIKNKKGFVDGTLNRPTHNPNEQQQ 90
Query: 404 WKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEISNLT 583
W + + +V W+L ++ K+I ++ I+ A +W +L ERF +N L+ I+ I
Sbjct: 91 WDRCNILVKTWLLGAISKEISNSVIHCKDAKTMWLELQERFSHTNTVQLFNIENAIHECA 150
Query: 584 QGNSSVAVYFTKLKKLWDEYSSLVSWPTCTCGTVKQIMEMESHSKLIKFLMGLNDAFDGA 763
QG +V +FTKLK LWDE +L +P CTC T ++ K +KFLMGL D +
Sbjct: 151 QGTGTVTSFFTKLKGLWDEKDALCGFPPCTCATAAEVKTYMETQKTMKFLMGLGDNYATV 210
Query: 764 RSQILLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVENSALLSKTTGHEKPYIPXXXXX 943
RS I+ M+PLP++NKAY+M ++ E+Q A+ ++ S + P
Sbjct: 211 RSNIIGMDPLPTVNKAYAMALRHEKQAEASNGKVAVPNEASAFSVRKLDQDP----NTTE 266
Query: 944 XXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHGYPDWFKQLKEQRRLGLKP 1123
TK RA L C +CG GH C + Q R +
Sbjct: 267 REVKCEKCNMTNHSTKNCRAHLKCTYCGGKGHTYDYCRRRKNTMGG-----GQGRSKVNH 321
Query: 1124 VANLAETDHKNTTKAITENSSDKGLQLGGISTLIQQEIAKYP-----------CQQKSGG 1270
A L E T ++++ Q+ G+ + I+ + +Q S
Sbjct: 322 AATLNEGKEDVTNFPLSQSECQ---QMMGLLSKIKTAATSHSDGHQMLEMLHATKQASAN 378
Query: 1271 NIGNTEYGHTYAHFAEYAGTFTSDDTHFALTASENLDKGSWILDTSASRHMCNNPSFMTD 1450
+GN ++ E +G FAL S ++ WILD+ AS H+ + SF+T
Sbjct: 379 LVGNVP------NYEELSGRV------FAL--SRDIKDTMWILDSGASDHIVCDSSFLTS 424
Query: 1451 LNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVPSFKYNLLSISYLIQKCNLK 1630
PV+ I V PDG++ V+H G V + +L +VL VP F NL+SIS L
Sbjct: 425 FQPVHNRI-VKLPDGTSAHVSHIGTVSFSAQFVLHNVLCVPLFYLNLISISKLAFDSFYV 483
Query: 1631 CIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLDMWHKR 1810
IF C IQDL++ I +G LY L + +C + + T D +WH+R
Sbjct: 484 TIFLRQVCFIQDLQSGKMIGMGTESEGLYCLNLP---RKGTCNVVNTKTQD----LWHQR 536
Query: 1811 LGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHID 1990
LGH S + PFL+ + C +C +AK R PFP S S + + FDL+H+D
Sbjct: 537 LGHPSSKVSVLFPFLQ-----NKTLDVSTCSICPLAKHTRTPFPLSVSSSDSCFDLIHVD 591
Query: 1991 IWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSF 2170
IWG Y ++ Y LTIVDD SR W+YLMHHKS+ LL +F+ +V NQF + VK
Sbjct: 592 IWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKSEARSLLVHFVNLVANQFGSQVKIV 651
Query: 2171 RSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPS 2350
RSDNG EF H+ + S GILHQ SC+ TPQQNG+VERKHRHLL++ R L+FQS LP
Sbjct: 652 RSDNGPEF-KHT--QFYSSRGILHQTSCINTPQQNGVVERKHRHLLNVARALLFQSHLPK 708
Query: 2351 KFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKF 2530
FW ++LTAAY+INR PT L K+P+E L+ +PNYS L+ FGC + + KF
Sbjct: 709 PFWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKSPNYSHLRVFGCRCFVSTHPLRPSKF 768
Query: 2531 APRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHN-LTAISP-----LT 2692
PR + +F+GY GQKG+K+Y+L K+ L+SRDV F E FP+ N L+ SP
Sbjct: 769 DPRSIESVFIGYPHGQKGYKVYSLKDKKXLISRDVTFFETEFPYQNXLSTTSPSLDTFFP 828
Query: 2693 PLPQVP-------------------ITSS---------DLLDTPLHVTTPAVSETEFAXX 2788
LPQ P TSS D + HV P+ +
Sbjct: 829 SLPQTPDIDDDHISFNHSGSNLQPSATSSVDXHPQPTLDNSHSSSHVDPPSSPPS----L 884
Query: 2789 XXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPH- 2965
R SSR +K P L D+ A+ +P P T+ H
Sbjct: 885 NTSPPVISQPSPSQPRRSSRPTKTPTTLQDFHIEAALPS-------RPVPPSSTSEVAHS 937
Query: 2966 -PIHSFPYTIS-PLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNET 3139
IHS +S + +F ++ KEP S+ QA D W EAM+ E+ AL+ N+T
Sbjct: 938 GTIHSLSQVLSYDRLSPMHKAFTVKITLAKEPRSFSQAVLDSRWREAMNTEIQALQANKT 997
Query: 3140 WDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMV 3319
W +V LP K PIGCKWV+K+K NPDG+++RYKARLVAKG+ QV G+DY + F+PVAK+
Sbjct: 998 WSLVPLPSHKKPIGCKWVYKIKYNPDGTIERYKARLVAKGFSQVEGIDYRETFAPVAKLT 1057
Query: 3320 TVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGL 3499
TVR+L+++A+I+ W LHQLD+NNAFL+G L E YM P G+ + +VC L KSLYGL
Sbjct: 1058 TVRVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQLPPGFGRKGEHRVCKLHKSLYGL 1117
Query: 3500 KQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQA 3679
KQASRQW +L L G QS D LF R+ F LL+YVDDV++ G++ DI
Sbjct: 1118 KQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDVILAGNSLEDIIE 1177
Query: 3680 LKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLP 3859
K +L + F +KD+G RYFLG+E+AR G L QRKY L++L D G L KP P+
Sbjct: 1178 TKQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQRKYALELLEDAGFLGAKPSRFPVE 1237
Query: 3860 QGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALH 4039
Q L L G L + +YR L+GRL+YL +TRPD+ Y+V LSQF+++P H DAA
Sbjct: 1238 QSLTLTRGDGAELKDASQYRRLVGRLIYLTITRPDLVYAVHILSQFMDTPRQPHLDAAYK 1297
Query: 4040 LVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSC 4141
++RY+K P G+F S+ L+LTAYCDADW C
Sbjct: 1298 VLRYVKQTPGQGIFLPSTGQLELTAYCDADWARC 1331
Score = 166 bits (419), Expect(2) = 0.0
Identities = 83/155 (53%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +1
Query: 4144 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 4323
DTR+S TGYCI G ISWK KKQ TVS+SSAEAEYR+++TT CE+ WL L D ++
Sbjct: 1333 DTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVN 1392
Query: 4324 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 4503
V LFCDNQAA+HI +NPVFHERTKH+++DCH+VR K + + I + Q AD+
Sbjct: 1393 HAHAVKLFCDNQAAIHIASNPVFHERTKHIEMDCHVVREKVQRGLVKTMHIRTQEQPADL 1452
Query: 4504 LTKNLGSSQHSNISSKLGMLDLHSLPSLRGG-VDI 4605
TK L S Q S + SKLG++++H+ +LRG VD+
Sbjct: 1453 FTKPLSSKQFSTLLSKLGVINIHT--NLRGSEVDV 1485
>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1376
Score = 865 bits (2234), Expect(2) = 0.0
Identities = 506/1323 (38%), Positives = 732/1323 (55%), Gaps = 28/1323 (2%)
Frame = +2
Query: 257 LSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDSNSPDYDNWKKVDYMVTNW 436
++LVS L NY +W R+ML AL AK K+ F++G P S+ Y WK+ + MV +W
Sbjct: 1 MALVSPSLDSTNYHSWSRSMLTALSAKNKVEFVDGSAPQPPSSDRIYSAWKRCNNMVVSW 60
Query: 437 ILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEISNLTQGNSSVAVYFT 616
++ S+ I + +++DSA E+W DL R+ + + + +Q E S++ QG+ SV YFT
Sbjct: 61 LVPSVSFSIRQSILWMDSAEEIWRDLKSRYSQGDLLRISALQLEASSIKQGDLSVTDYFT 120
Query: 617 KLKKLWDEYSSLVSWPTCTCGTVKQIMEMES-------HSKLIKFLMGLNDAFDGARSQI 775
+L+ +WDE + P C C VK I ++ S + ++FL GLND + RS +
Sbjct: 121 QLRIIWDELENFRPDPICVC-IVKCICKVSSILAQRKLEDQAMQFLRGLNDQYANVRSHV 179
Query: 776 LLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVE---NSALLSKTTGHEKPYIPXXXXXX 946
LLM+PLP +NK +S + + ERQ + + + E N+A+++ T
Sbjct: 180 LLMDPLPPINKIFSYVAQQERQFAVSDSLAEVKNGFANAAIMNST--------------- 224
Query: 947 XXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHGYPDWFKQLKEQRRLGLKPV 1126
C CG NGH S C++ HG+PD K K G K
Sbjct: 225 ----------------------CNFCGRNGHTESTCYRKHGFPD--KNGKSSSNRG-KAC 259
Query: 1127 ANLAETDHKNTTKAITENSSDKGLQLGGISTLIQQEIAKYPCQQKSGGNIGNTEYGHTYA 1306
++ + H T C +K G GH ++
Sbjct: 260 SHCGKNGHTVDT-----------------------------CYKKHG-----FPPGHRFS 285
Query: 1307 HFAEYAGTFTSDDTHFALTASENLDKGSWILDTSASRHMCNNPSFMTDLNPVNTHITVHQ 1486
+ + A +S H T S D WI+D+ A+ H+ + F T + + V+
Sbjct: 286 N-NKSASANSSVQPHICTTHS--FDTTPWIIDSGATDHVTCSLQFFTSYKLIEP-VIVNL 341
Query: 1487 PDGSTKIVTHSGKVHLTDSLILTDVLLVPSFKYNLLSISYLIQKCNLKCIFYPSHCLIQD 1666
P G THSG V+ + + LTDVL + SF +NL+S+S L+ + + F + C IQD
Sbjct: 342 PTGHKVTATHSGTVYFSSNFQLTDVLYISSFAFNLISVSKLVSTTSYQITFTNNVCFIQD 401
Query: 1667 LRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSF-LDMWHKRLGHASFSLLEH 1843
+RT I G LY L P ++ D +D+WH RLGH S + L +
Sbjct: 402 IRTKMKIGSVDVRGGLYQLIPHHFKPPFIHSTIIHPKCDVIPIDLWHFRLGHLSNTRLHN 461
Query: 1844 LPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSS-SCV 2020
+ L P C T K C +CH AKQ +L F +S S A F L+H+DIWGPYS S +
Sbjct: 462 MQQLYP-CLTINKDFT--CNICHYAKQRKLSFSSSHSTASRPFSLLHMDIWGPYSCISSI 518
Query: 2021 ANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFIS 2200
+ TIVDD + W++LM +KS+ + NFI +++NQFNT +++ ++DNGAEF+
Sbjct: 519 HGHKFFFTIVDDNTHFTWIFLMINKSETRMHISNFINLIENQFNTRIQTIQTDNGAEFLM 578
Query: 2201 HSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTA 2380
Q+ F+S GI+HQ +C+ TPQQNG+VERKH+HLL++ L+F SKLP FW ++LL A
Sbjct: 579 ---QNFFNSKGIVHQTTCIETPQQNGVVERKHQHLLNVTHALLFHSKLPYCFWSYALLHA 635
Query: 2381 AYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFL 2560
Y+INR+ T L+ K+P++ LY T + + L+ FGCL Y + + ++ K PR + C+FL
Sbjct: 636 TYLINRITTPLLDNKTPFQKLYGQTCDITELRVFGCLCYVSTSTANRKKLDPRAHPCVFL 695
Query: 2561 GYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPF-------HNLTAISPLTPLPQVPITS 2719
G+ P KG+ Y+L T+ I +SR+V F+E+ FP N+ +SP++ P S
Sbjct: 696 GFSPTTKGYITYDLHTRAITISRNVSFYENHFPLLQSTSSTSNIPVVSPISFGIHSP--S 753
Query: 2720 SDLL----DTPLH-VTTPAVSETEF----AXXXXXXXXXXXXXXXXXRASSRISKPPGWL 2872
DL+ D H VT+P + T R S+R+ PP +L
Sbjct: 754 HDLISILPDPHQHNVTSPNPATTSHDSISLAPYSTTADSLPPNSSPLRRSTRLRNPPSYL 813
Query: 2873 ADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKE 3052
DY S S+ + P G +PI Y + + +F++++S E
Sbjct: 814 QDYHHSLT----STSTNLHP-------GMLYPIEK--YISYSRLSNDFQAFVSSISAVSE 860
Query: 3053 PHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDR 3232
PHSY +A K W++AMH EL+AL++N+TW + LPP K +GC+W++K+K N DGS++R
Sbjct: 861 PHSYAEAAKHDCWLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGSIER 920
Query: 3233 YKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLD 3412
YKARLVAKGY QV G+DY FSPVAK+ TVRLL+A+A + +W L QLD+NNAFLHG L+
Sbjct: 921 YKARLVAKGYTQVEGLDYLATFSPVAKLTTVRLLLALAAVFDWHLKQLDVNNAFLHGDLN 980
Query: 3413 ESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFI 3592
E YM P G QVC L+KSLYGLKQASRQW +L L G +QS D LF+
Sbjct: 981 EEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQASRQWFAKLSSFLIHHGYHQSASDHSLFM 1040
Query: 3593 RHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAG 3772
+ S ALLIYVDD+++ G+N ++IQ + LD F IKDLG +YFLG+E+AR +G
Sbjct: 1041 KFSSSSTTALLIYVDDIVLAGNNLSEIQLITGLLDVAFKIKDLGNLKYFLGLEVARNKSG 1100
Query: 3773 TFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNL 3952
L+QRKY+LDILSD GM+ +PV TP+ +L+ SG PL +P YR L+GRL+YL
Sbjct: 1101 IHLSQRKYVLDILSDCGMMASRPVSTPMDYTSRLSASSGTPLADPSSYRRLLGRLIYLTT 1160
Query: 3953 TRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADW 4132
TRPDI+Y V LSQF+++P T H A ++RYLK P GLF+ ++SSL L A+ D+DW
Sbjct: 1161 TRPDISYVVHHLSQFMSAPSTAHSQAIFRILRYLKQAPGSGLFFPTNSSLHLKAFSDSDW 1220
Query: 4133 GSC 4141
C
Sbjct: 1221 AGC 1223
Score = 178 bits (452), Expect(2) = 0.0
Identities = 88/151 (58%), Positives = 111/151 (73%)
Frame = +1
Query: 4144 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 4323
DTR+SITG+ + LG LISW+ KKQ TVS+SS+EAEYRAL+TT EL WL+YL HD +P
Sbjct: 1225 DTRRSITGFSVYLGDSLISWRSKKQPTVSRSSSEAEYRALATTTSELQWLTYLLHDLHVP 1284
Query: 4324 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 4503
+ P L+CDNQ+ALHI AN VFHERTKH+DIDCH+VR K + + ++S QLADI
Sbjct: 1285 VHQPALLYCDNQSALHIAANQVFHERTKHIDIDCHLVREKLQSGLLKLLPVASPHQLADI 1344
Query: 4504 LTKNLGSSQHSNISSKLGMLDLHSLPSLRGG 4596
TK+L S + + SKLGML+L+S L GG
Sbjct: 1345 FTKSLSPSMFTALYSKLGMLNLYS--QLEGG 1373
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 861 bits (2224), Expect(2) = 0.0
Identities = 515/1340 (38%), Positives = 730/1340 (54%), Gaps = 13/1340 (0%)
Frame = +2
Query: 167 EANGTGADGKTQLVQQVADPFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKL 346
+AN TG ++ + DPF L +SDHPG+ LVS + G+NY TW RAM I+L AK K+
Sbjct: 59 DANKTGLTS-SKATTEALDPFSLHHSDHPGMVLVSKVIEGDNYSTWSRAMRISLSAKDKI 117
Query: 347 GFINGQIVAPDSNSPDYDNWKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAER- 523
GF+ G I P S + +W++ + M ++ + E
Sbjct: 118 GFVTGSIKPPSSTDDSFPSWQRCNDM-----------------------HQKSGQICENV 154
Query: 524 FGESNGPLLYQIQKEISNLTQGNSSVAVYFTKLKKLWDEYSSLVSWPTCTCGTVKQIMEM 703
F + N +YQI+++I QG S++VY+TKLK WDE SS +C+CG ++++ E
Sbjct: 155 FRQGNDSRIYQIKRDIVEHRQGQQSISVYYTKLKAFWDELSSYHEVLSCSCGGLEKLKER 214
Query: 704 ESHSKLIKFLMGLNDAFDGARSQILLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVENS 883
+ ++++FLMGLND++ R QILLM PLP + YS++++ E+Q VE
Sbjct: 215 DEKERVMQFLMGLNDSYAAIRGQILLMHPLPDTRRVYSLVLQQEKQ----------VE-- 262
Query: 884 ALLSKTTGHEKPYIPXXXXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKL 1063
+S G++ Y + ++++ L C +C + H + +C+ L
Sbjct: 263 --VSLNNGNKNHYA------MLADRDNKATSAHQVQKQKTPLHCSYCDRDYHSIEKCYYL 314
Query: 1064 HGYPDWFKQLKEQRRLGLKPVANLAETDHKNTTKAITENSSDKGLQLGGISTLIQQEIAK 1243
HG+P K + + + +N A T KA+ + G T +
Sbjct: 315 HGFPIGHKLHGKNVKPPNQRHSN-ANNVKVETNKAVETEAKLLPTNDGPRLTTEEYNQLM 373
Query: 1244 YPCQQKSGGNIGNTEYGHTYAHFAEYAGTFTSDDTHFALTASENLDKGSWILDTSASRHM 1423
++ +GGN HFA G S N+ WI+D+ A+ H+
Sbjct: 374 AMIRKNNGGNS---------QHFANATGINMSSSKIIPNCPHSNM---CWIIDSGATDHV 421
Query: 1424 CNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVPSFKYNLLSIS 1603
++ + N T T+ P+G + G +H+T + L DVL VP F+ NLLS+S
Sbjct: 422 TSSAELLDPKNLPKT-TTISLPNGGQAHIESIGSLHVTPHIKLDDVLKVPQFQVNLLSVS 480
Query: 1604 YLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTD 1783
L + +F+ C++QD T TI +G+ LY LA + P+L ++
Sbjct: 481 KLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNGLYYLAQDQN------PAL-AYAIH 533
Query: 1784 SFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTS--ASH 1957
D+WH+RLGH S L+ L + P +K C +C +AKQ RL FP+S +SH
Sbjct: 534 KHSDLWHQRLGHPSSGPLQVLAKVNPKIYFDSKHV---CDICPLAKQTRLSFPSSFISSH 590
Query: 1958 AVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMV 2137
A FDL+H DIWGP+ + + Y LTIVDD +R W++LM KS+ +L++FI V
Sbjct: 591 AP--FDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWV 648
Query: 2138 KNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIG 2317
+ QFN +K+ R+DNG E S + + GI + SC +TPQQNG+VERKHRHLL++G
Sbjct: 649 ETQFNRCIKTLRTDNGTEI--SSMKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVG 706
Query: 2318 RTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVY 2497
R L FQ+ LP KFW S+ TA Y+INRLPT L+ KSPY++L + P+Y L+ FGCL Y
Sbjct: 707 RALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCY 766
Query: 2498 SANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTA 2677
+ N P KF R +CIF+GY GQKG+++Y+L T + S DV FHEH FPFH
Sbjct: 767 ATNLLP-THKFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFPFHTNPQ 825
Query: 2678 ISP----LTPLPQV---PITSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXX- 2833
+ PLPQ PIT+ P +S E
Sbjct: 826 EEQHDVVVLPLPQTSYEPITTETTKPQADDQPPPLLSSLESTSNERTLXLDTIVSPPPPT 885
Query: 2834 -RASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHS 3010
R S RI +P L ++ + SS ++ +GT HP+ Y
Sbjct: 886 TRRSDRIKQPNVHLRNFHLYHTAKVASSQSS-------SLSGTRHPLTR--YISYAQLSP 936
Query: 3011 TYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKW 3190
Y +F+ ++T EP +Y QA DP W EAM EL ALE N TW + LP G PIGCKW
Sbjct: 937 KYRNFVCAITTLVEPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGCKW 996
Query: 3191 VFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLH 3370
V+K+K N DG+V+RYKARLVAKG+ Q G+DY + FSPVAK+ TVR L+AIA +++WSLH
Sbjct: 997 VYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLH 1056
Query: 3371 QLDINNAFLHGHLDESFYMLPPDGYTK-GKPGQVCFLKKSLYGLKQASRQWNTELCDKLT 3547
Q+D+ NAFLHG L E YM P G+ + G+ VC L KSLYGLKQASR W + +
Sbjct: 1057 QMDVQNAFLHGDLLEEVYMQLPLGFRQQGETPMVCRLNKSLYGLKQASRSWFRKFSATIQ 1116
Query: 3548 RFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGF 3727
+ G +QS D LF + G+ F A+LIYVDD+++TG+++ I ALK L T F IKDLG
Sbjct: 1117 QDGFHQSRADYSLFTKISGNSFTAVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQ 1176
Query: 3728 ARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEP 3907
RYFLG+E+AR + G ++QRKY LDIL + G+L KP+ TP+ + KL G L P
Sbjct: 1177 LRYFLGIEVARSTDGISISQRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGDLLKNP 1236
Query: 3908 DKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYA 4087
YR L+G+L+YL +TRP+I+YSV LSQF+ P H A HL+RYLKG P GL++
Sbjct: 1237 STYRRLVGQLIYLTITRPEISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGLYFP 1296
Query: 4088 SSSSLDLTAYCDADWGSCPI 4147
+ +L L +CDADW C I
Sbjct: 1297 AKGNLLLRGFCDADWARCSI 1316
Score = 171 bits (434), Expect(2) = 0.0
Identities = 79/143 (55%), Positives = 104/143 (72%)
Frame = +1
Query: 4147 TRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLPL 4326
TR+S+TGYCI L G ISWK KKQTTVS+SS E+EYRA+++ CEL WL YL D +
Sbjct: 1317 TRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITCELTWLRYLLDDLKVEH 1376
Query: 4327 QLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADIL 4506
P LFCD++AALHI ANPV+HERTKH++IDCH+VR + + I+ + S+ QLAD+
Sbjct: 1377 SQPAKLFCDSKAALHIAANPVYHERTKHIEIDCHVVRERIQSGAIVTAHVPSSCQLADLF 1436
Query: 4507 TKNLGSSQHSNISSKLGMLDLHS 4575
TK L SS ++ SK G+LD+H+
Sbjct: 1437 TKPLNSSIFHSLLSKFGVLDIHA 1459
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 851 bits (2198), Expect(2) = 0.0
Identities = 500/1265 (39%), Positives = 697/1265 (55%), Gaps = 24/1265 (1%)
Frame = +2
Query: 422 MVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEISNLTQGNSSV 601
MV +W+++S+ I + +++D A ++W DL R+ + + + +Q E S+L QG+ SV
Sbjct: 1 MVVSWLVHSVSPSIRQSILWMDQADDIWKDLKTRYSQGDLLRVSDLQLEASSLKQGDLSV 60
Query: 602 AVYFTKLKKLWDEYSSLVSWPTCTCGTVKQ-------IMEMESHSKLIKFLMGLNDAFDG 760
YFTKL+ LWDE + P CTC T+K I + + + ++FL GLND ++
Sbjct: 61 TEYFTKLRILWDELENFRPDPNCTC-TIKCACSVLTIIAQRKLEDQAMQFLRGLNDQYNN 119
Query: 761 ARSQILLMEPLPSLNKAYSMLVKIERQRS-----ATCAFPEPVENSALLSKTTGH-EKPY 922
+S +LLMEP ++K +S +V+ ERQ A +A+ S T H +
Sbjct: 120 VKSHVLLMEP--PISKIFSYVVQQERQLLGQNFIANVHLDRTSSINAVASPTCTHCNRTG 177
Query: 923 IPXXXXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHGYPDWFKQLKEQ 1102
K R + +C HCG GH + C++ HG+P K L ++
Sbjct: 178 HTDAVCFRKHGFPSTTNRSNKGSSNRPRRICTHCGKTGHTIEVCYQKHGFPPGSKPLSDK 237
Query: 1103 RRLGLKPVANLAETDHKNTTKA-ITENSSDKGLQLGGISTLIQQEIAKYPCQQKSGGNIG 1279
A +H T +TE++ +L Q++
Sbjct: 238 T----------ASVNHTVTGDCKVTESTQ----------SLESQDVR------------- 264
Query: 1280 NTEYGHTYAHFAEYAGTFTSDDTHFALTASENLDKGSWILDTSASRHMCNNPSFMTDLNP 1459
T F + S SWILD+ A+ H+ ++ S + +P
Sbjct: 265 ----------------------TSFPIVCSAISTPSSWILDSGATDHVSSSLSHFSSFSP 302
Query: 1460 VNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVPSFKYNLLSISYLIQKCNLKCIF 1639
+N I V P G + THSG V T+S L DVL +P+F YNL+SIS L+ + + IF
Sbjct: 303 INP-IDVKLPTGQHVLATHSGTVKFTNSFYLVDVLYIPAFTYNLISISKLVSSLSCQLIF 361
Query: 1640 YPSHCLIQDLRTD---GTIVVGRAVGKLYILATQSSLQPTSCPSLTSFTTDSF--LDMWH 1804
C+IQ+ T GT+ V + T S++ S S+ S +D+WH
Sbjct: 362 DHHSCIIQETNTMKKIGTVDVNEGLYSF----TASNIHHPSTNSVIVHPKCSIQPIDLWH 417
Query: 1805 KRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVH 1984
R+GH S L+ PFL T+ C CH AKQ +LPFP S S+A FDL+H
Sbjct: 418 FRMGHLSHERLQSFPFLS------VDTSFS-CNTCHHAKQKKLPFPLSHSYASQPFDLLH 470
Query: 1985 IDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVK 2164
+DIWGP S + + Y LTIVDD +R WL+LM +KS+ + + NFI V+ QF+ +VK
Sbjct: 471 MDIWGPCSVTSMHGHKYFLTIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKHVK 530
Query: 2165 SFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKL 2344
R+DNG EF S F S GI+HQ +CV TPQQNGIVERKH+HLL++ R+L+FQ+ L
Sbjct: 531 VIRTDNGLEF---SMTQYFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANL 587
Query: 2345 PSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKD 2524
PS FW F+L+ A ++IN +PT L+ SP+E LY H + S+L FGCL YS+ H+
Sbjct: 588 PSIFWCFALMHATFLINCIPTPFLHNISPFEKLYGHPCDISILCVFGCLCYSSTITSHRT 647
Query: 2525 KFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTPLPQ 2704
K PR + CIFLG+ P KG+ L+NL T +LVSR+V FHE FP + P +P
Sbjct: 648 KLDPRAHPCIFLGFKPHTKGYLLFNLHTHGLLVSRNVLFHEDHFP----SFTKPHSPSFS 703
Query: 2705 VPITSSDLLDTPLH---VTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLA 2875
P+ P+H V P + R S+R +PP +L
Sbjct: 704 SPV--------PIHYNYVDYPTFPSSSIVESSDPPTSDQHSSPPPLRRSTRPRRPPTYLQ 755
Query: 2876 DYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPY--TISPLFHSTYVSFLANVSTTK 3049
D+ A + +TG HP+HSF +SP FH ++ ++S+
Sbjct: 756 DF----------HGAFTSTSTAHSSTGIRHPLHSFLSYDLLSPSFHH----YVFSISSVT 801
Query: 3050 EPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVD 3229
EP ++ +A K W++AMH+E+ ALE N TW + LPP K IGC+WV+KVK DGS+D
Sbjct: 802 EPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSID 861
Query: 3230 RYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHL 3409
RYKARLVAKGY Q+ G+D++D FSPVAK+ TVRLL+++A I NW L QLD+NNAFLHG L
Sbjct: 862 RYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFLHGDL 921
Query: 3410 DESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLF 3589
+E YM P G T PGQVC L++SLYGLKQASRQW L L + G SP D LF
Sbjct: 922 NEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLF 981
Query: 3590 IRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSA 3769
++ + A+LIYVDD+++ G++ +I L S L T F IKDLG +YFLG+E+AR
Sbjct: 982 LKCSPATTTAILIYVDDIVLAGNDLTEIHHLTSLLHTTFQIKDLGNLKYFLGLEVARNHT 1041
Query: 3770 GTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLN 3949
G L QRKYILD+LSD GML KPV TP+ + L+ SG PL + YR L+GRL+YL
Sbjct: 1042 GIHLCQRKYILDLLSDTGMLASKPVSTPMDYSMHLSASSGTPLTDTAAYRRLVGRLIYLT 1101
Query: 3950 LTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDAD 4129
TRPDITY+VQQLSQF+++P T H A ++RYLKG P G+F + +SS+ L A+ D+D
Sbjct: 1102 NTRPDITYAVQQLSQFVSNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSD 1161
Query: 4130 WGSCP 4144
W CP
Sbjct: 1162 WAGCP 1166
Score = 178 bits (451), Expect(2) = 0.0
Identities = 91/152 (59%), Positives = 110/152 (72%)
Frame = +1
Query: 4141 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 4320
PDTR+SITG+ + LG LISWK KKQ TVS+SS+EAEYRAL+TT CEL WLSYL DF +
Sbjct: 1166 PDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHI 1225
Query: 4321 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 4500
P L+CDNQ+AL I +NPVFHERTKH++IDCHIVR+K + +SS+ QLAD
Sbjct: 1226 DPISPSILYCDNQSALQIASNPVFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSQQLAD 1285
Query: 4501 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGG 4596
ILTK L + SKLGML++HS L GG
Sbjct: 1286 ILTKPLSPFVFRSHCSKLGMLNIHS--QLEGG 1315
>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1353
Score = 859 bits (2220), Expect(2) = 0.0
Identities = 491/1294 (37%), Positives = 706/1294 (54%), Gaps = 17/1294 (1%)
Frame = +2
Query: 314 MLIALGAKTKLGFINGQIVAPDSNSPDYDNWKKVDYMVTNWILNSLGKDIVDAFIYVDSA 493
ML+ LG K KL F++G + P + D W + + +V +WI+ SL ++ + I++ +A
Sbjct: 1 MLLVLGTKNKLAFVDGSLARPVTAGVDQTAWDRCNKLVISWIVQSLDTSLIPSVIWMPTA 60
Query: 494 YELWNDLAERFGESNGPLLYQIQKEISNLTQGNSSVAVYFTKLKKLWDEYSSLVSWPTCT 673
++WNDL +R+ + + + ++ +EI +L QGN S+ YFT L+ LW E P+CT
Sbjct: 61 SQIWNDLKKRYYQGDAFRISELLEEIYSLKQGNMSITHYFTTLQGLWQELDHFCPIPSCT 120
Query: 674 CGTVKQIMEMESHSKLIKFLMGLNDAFDGARSQILLMEPLPSLNKAYSMLVKIERQRSAT 853
C T + FL GLN+ + RSQ++LM+PLPS+ K +SM+++ ER+ T
Sbjct: 121 CFTTR-------------FLKGLNEQYSNVRSQVMLMDPLPSVQKVFSMILQQEREFHGT 167
Query: 854 CAFPEPVENSALLSKTTGHEKPYIPXXXXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVN 1033
++ +L+ T+ +E+ K ++ +C HCG
Sbjct: 168 -------NDNQVLAVTSNNER-------------NNYKGSKTFKRNKDYNTKVCSHCGRI 207
Query: 1034 GHEVSECFKLHGYPDWFKQLKEQRRLGLKPVANLAETDHKNTTKAITENSSDKGLQLGGI 1213
GH V C+K HG P Q K R + N +++++ +D
Sbjct: 208 GHLVDSCYKKHGPP---LQHKHGRIV--------------NQYQSVSDEDTDD------- 243
Query: 1214 STLIQQEIAKYPCQQKSGGNIGNTEYGHTYAHFAEYAGTFTSDDTHFALTASENLDKGSW 1393
Q + + GN+ E + +G S S N D W
Sbjct: 244 ----DQSVHSQRVVSHNSGNMFTPEQHQALLALLQQSGMILS------FPYSHNSD--CW 291
Query: 1394 ILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVP 1573
I+DT A+ H+C N +F + I + P+GS SG V L+ + LTDVL +P
Sbjct: 292 IIDTGATDHVCKNINFFQSYRRIKP-ILIQLPNGSQVSTCVSGTVLLSKTCYLTDVLFIP 350
Query: 1574 SFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQSSLQPTS 1753
+F +NL+S+S L + + F S C IQ ++G A + + A SS +
Sbjct: 351 NFHFNLISVSKLAKTLSCTLTFSDSDCQIQ--ANHSMRMIGAAELRAGLYAMVSSPESNV 408
Query: 1754 CPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKP--LCNTGAKTAIQQCVVCHMAKQH 1927
TS D+WH RLGH S L L P CN K ++ C +CH+AK
Sbjct: 409 VHHCTSHFFTYQSDLWHLRLGHLSHDKLSALKGSYPEIQCN---KISLP-CEICHLAKHK 464
Query: 1928 RLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVP 2107
RLPFP S + + N+FDL+H+DIWGP S + + Y LTIVDD SR W++ M +K +
Sbjct: 465 RLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFMKNKFETK 524
Query: 2108 KLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVE 2287
LL+NF+ V+ QF N+K+ R+DNG+EF+ +D + GI+HQ SCV TPQQNG+VE
Sbjct: 525 LLLQNFVSFVQTQFQQNIKTIRTDNGSEFL---LKDWYAKLGIVHQTSCVNTPQQNGVVE 581
Query: 2288 RKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYS 2467
RKH+H+L + R LMFQS + FW +++ A ++INRLPT L SPY VLYS P++S
Sbjct: 582 RKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFS 641
Query: 2468 LLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHE 2647
LK FGCL +++ ++ K PR KC+FLGY G KGF +Y+L T++ +SRDV F+E
Sbjct: 642 HLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDVQFYE 701
Query: 2648 HSFPFHNLTAIS----PLTPLPQVPITSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXX 2815
+ FP +I P+ P+ Q+P+TS D + + H + ETE
Sbjct: 702 NIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSHTHDN---LDETEHEHNSSTLPMTNS 758
Query: 2816 XXXXXX----------RASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPH 2965
R S R+ PG+L DY + AA K D T +
Sbjct: 759 SNSDQPNIEINIPEIRRTSQRVKNRPGYLQDY--------HCTLAASKVDQSSSTAR--Y 808
Query: 2966 PIHSF-PYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETW 3142
PI + PYT + + SF++ +S+ EP SY A W EA+ ELDAL+ +TW
Sbjct: 809 PISDYLPYTS---YSAVQQSFVSTISSIIEPRSYQDAINHDCWKEAIRAELDALDKQKTW 865
Query: 3143 DMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVT 3322
+ DLPP K +GC+WVFKVK + DGSV+RYKARLVAKG+ Q+ G+DY D FSPV +M T
Sbjct: 866 ILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKGFTQIPGLDYIDTFSPVVRMTT 925
Query: 3323 VRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLK 3502
+R+ +AIA NWS+HQLDIN AFLHG L E YM PP G P +VC L+KSLYGLK
Sbjct: 926 IRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLK 985
Query: 3503 QASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQAL 3682
Q SRQWN +L + L FG QS D LF + F+A+L+YVDD++++GS++ +I +
Sbjct: 986 QVSRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFIAILVYVDDLIISGSDETEIMKV 1045
Query: 3683 KSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQ 3862
K LD F+IKDLG YFLG+E +R G + QRKY L++L D G+L KP TP+
Sbjct: 1046 KRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKYALELLQDTGLLASKPCSTPMDH 1105
Query: 3863 GLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHL 4042
+L +P YR L+GRL+YL TRPD+ ++V +LSQF++ P H+ AA +
Sbjct: 1106 TTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAVGKLSQFMHQPNNAHFQAARKV 1165
Query: 4043 VRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCP 4144
+RY+K P+ GLF+ SSS L LT Y D+DW +CP
Sbjct: 1166 LRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCP 1199
Score = 166 bits (419), Expect(2) = 0.0
Identities = 85/153 (55%), Positives = 108/153 (70%)
Frame = +1
Query: 4141 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 4320
PD+R+SI+G+C LG L+SWK KKQ VS+SS+EAEYRAL+ VCE WL L DF L
Sbjct: 1199 PDSRRSISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQL 1258
Query: 4321 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 4500
+P+ LFCDNQ+AL+I ANPVFHERTKH++IDCH VR++ + FI I+S+ QLAD
Sbjct: 1259 QDLIPISLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLAD 1318
Query: 4501 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGGV 4599
ILTK L + KLG+ + + PSLR GV
Sbjct: 1319 ILTKPLLPKMFQDFVCKLGLSNF-TTPSLREGV 1350
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 874 bits (2259), Expect = 0.0
Identities = 523/1353 (38%), Positives = 753/1353 (55%), Gaps = 47/1353 (3%)
Frame = +2
Query: 224 PFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDSNSPDYDN 403
PF L+N D PG +LVS L G N+ +W+ AM ++L AK K+ F++G + P + P +
Sbjct: 63 PFALSNGDSPGNTLVSEVLDGTNFSSWKIAMFVSLYAKNKIAFVDGTLPRPPESDPSFRV 122
Query: 404 WKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEISNLT 583
W + + MV +WILNS+ K I + + + A E+W DL RF +N P YQ+ ++I +L
Sbjct: 123 WSRCNSMVKSWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSLQ 182
Query: 584 QGNSSVAVYFTKLKKLWDEYSSLVSWPTC-TCGTVKQIMEMESHSKLIKFLMGLNDAFDG 760
QG S++ Y+T LK LWD+ TC C M HSK++KFL GLN+++
Sbjct: 183 QGTMSLSDYYTALKTLWDDLDGASCVSTCKNCTCCIATASMIEHSKIVKFLSGLNESYST 242
Query: 761 ARSQILLMEPLPSLNKAYSMLVKIERQRSATC----------AFPEPVENSALLSKTTGH 910
RSQI++ + +P L + Y++L + QR+ + P+ + + L+K+ G
Sbjct: 243 IRSQIIMKKTIPDLAEIYNLLDQDHSQRNIVTMPTNASTFNVSAPQSDQFAVNLAKSFG- 301
Query: 911 EKPYIPXXXXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHGYPDWFKQ 1090
+ + K+ C HCG GH C+K+HGYP FK
Sbjct: 302 --------------------------TQPKPKVQCSHCGYTGHNADTCYKIHGYPVGFKH 335
Query: 1091 LKEQRRL--GLKP---VANLAETDHKNTTKAITENSSDKGLQ--LGGISTLIQQEIAKYP 1249
K+++ + KP VANLA TD K ++T+ G+ +G +S Q++ Y
Sbjct: 336 -KDKKTVTPSEKPKSVVANLALTDGK---VSVTQGIGPDGIVELVGSMSKSQIQDVIAYF 391
Query: 1250 CQQKSGGNIGNTEYGHTYAHFA----EYAGTFTSDDTH-------FALTASEN-LDKGSW 1393
Q + N T A FA + TFT +LT+S+ L +W
Sbjct: 392 STQ-----LHNPAKPITVASFASTNNDNGSTFTGISFSPSTLRLLCSLTSSKKVLSLNTW 446
Query: 1394 ILDTSASRHMCNNPSFMTDLNP-VNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLV 1570
I+D+ A+ H+ + + L+ ++ +T+ P GS + G + L +L L +VL +
Sbjct: 447 IIDSGATHHVSYDRNLFESLSDGLSNEVTL--PTGSNVKIAGIGVIKLNSNLTLKNVLYI 504
Query: 1571 PSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQSSLQPT 1750
P F+ NLLS+S + K F C+IQD + I G +G LY+L T SS++ T
Sbjct: 505 PEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVLDT-SSVECT 563
Query: 1751 SCPSLTSFTTDSFLD------MWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCH 1912
S +S T + + +WH RLGH S+ + L + L K + C +C
Sbjct: 564 SVDINSSVTEKQYCNAVVDSALWHSRLGHPSYEKNDVLHDVLGLPKRN-KEDLVHCSICQ 622
Query: 1913 MAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHH 2092
AKQ L FP+ + + N FDL+HID WGP+++ Y LTIVDD SR W+YLM
Sbjct: 623 KAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATWVYLMKA 682
Query: 2093 KSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQ 2272
K+ V ++ +F+ MV+ Q+ T VK+ RSDN E + L+ + GI+ SC TPQQ
Sbjct: 683 KNDVLQIFPDFLKMVETQYGTLVKAVRSDNAPEL---RFEALYQAKGIISYHSCPETPQQ 739
Query: 2273 NGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSH 2452
N +VERKH+H+L++ R LMF++ +P +FW +L+A ++INRLPT L+ KSP+E+L+
Sbjct: 740 NSVVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFELLHLK 799
Query: 2453 TPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRD 2632
P+Y+ LK FGCL Y + + + KFAPR C+FLGY G KG+KL +L+T I +SR
Sbjct: 800 VPDYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIHISRH 859
Query: 2633 VDFHEHSFPFHNLTAISPLTPLPQVPITSSDLLDTPLHVTT---PAVSETEFAXXXXXXX 2803
V F+E FPF + T I P DL+D P+H P+ SE+
Sbjct: 860 VVFYETVFPFTDKTII---------PRDVFDLVD-PVHENIENPPSTSESA--------- 900
Query: 2804 XXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSF- 2980
+S R S+PPG+L DY NAV P T +P++++
Sbjct: 901 --------PKVSSKRESRPPGYLQDYFC-NAV-------------PDVTKDVRYPLNAYI 938
Query: 2981 PYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLP 3160
YT + +++ V+ EP +Y QA K W++AM E+DALE TW + LP
Sbjct: 939 NYT---QLSEEFTAYICAVNKYPEPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLP 995
Query: 3161 PGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVA 3340
GK PIGCKWVFKVK+N DGS++R+KARLVAKGY Q G+DY+D FSPVAKM TV+ L++
Sbjct: 996 QGKKPIGCKWVFKVKLNADGSLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLS 1055
Query: 3341 IATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPG-----QVCFLKKSLYGLKQ 3505
+A IK WSLHQLDI+NAFL+G L E YM P GY+ + G V L+KSLYGLKQ
Sbjct: 1056 VAAIKEWSLHQLDISNAFLNGDLKEEIYMTLPPGYSMKQGGVLPQNPVLKLQKSLYGLKQ 1115
Query: 3506 ASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALK 3685
ASRQW + L + G +S D LF R G ++ALL+YVDD+++ G+ND +I+ LK
Sbjct: 1116 ASRQWYLKFSSTLKKLGFKKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELK 1175
Query: 3686 SYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQG 3865
L F ++DLG +YFLG+EIAR G + QRKY +++L D G+L C+P P+
Sbjct: 1176 KDLAKAFKLRDLGPMKYFLGLEIARTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEPS 1235
Query: 3866 LKLAGQSG-RPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHL 4042
LKL+ + +D P+ YR L+G+L+YL +TRPDITY++ +L QF +SP H AA +
Sbjct: 1236 LKLSQHNDEHVIDNPEVYRRLVGKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQKV 1295
Query: 4043 VRYLKGCPSLGLFYASSSSLDLTAYCDADWGSC 4141
V YLKG LGLFY+S S L L AY DADWGSC
Sbjct: 1296 VHYLKGTIGLGLFYSSKSDLCLKAYTDADWGSC 1328
Score = 137 bits (345), Expect = 8e-29
Identities = 66/147 (44%), Positives = 95/147 (64%)
Frame = +1
Query: 4132 GFMPDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHD 4311
G D+R+S +G C+ LG LISWK KKQ S SSAE+EYRA++ E+ WL L +
Sbjct: 1326 GSCVDSRRSTSGICMFLGDSLISWKSKKQNMASSSSAESEYRAMAMGSREIAWLVKLLAE 1385
Query: 4312 FSLPLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQ 4491
F + PVPLFCD+ AA+HI N VFHERTKH++ DCHI R++ + + + +T Q
Sbjct: 1386 FQVKQTKPVPLFCDSTAAIHIANNAVFHERTKHIENDCHITRDRIEQGMLKTMHVDTTSQ 1445
Query: 4492 LADILTKNLGSSQHSNISSKLGMLDLH 4572
LAD+LTK L + +++ K+ +L ++
Sbjct: 1446 LADVLTKPLFPTLFNSLIGKMSLLSIY 1472
>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
Length = 1236
Score = 855 bits (2210), Expect = 0.0
Identities = 519/1330 (39%), Positives = 715/1330 (53%), Gaps = 20/1330 (1%)
Frame = +2
Query: 218 ADPFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDS-NSPD 394
A+P+ L +SDHPG+ L+S PL G+NY TW RAM I+L AK+KLGFI+G P + + PD
Sbjct: 15 ANPYFLHHSDHPGIVLISKPLNGDNYWTWCRAMTISLNAKSKLGFIDGTTTMPSATDKPD 74
Query: 395 -YDNWKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEI 571
+ WKK + M+ +WILNSL +D+ D+ I+ +A E+W DL +RF ++N P ++QI+++I
Sbjct: 75 EHALWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQTNAPHIFQIERDI 134
Query: 572 SNLTQGNSSVAVYFTKLKKLWDEYSSLVSWPTCTCGTVKQIMEMESHSKLIKFLMGLNDA 751
+ LTQ +VA Y+T+LKKLWDE S C+CG + +L++FLMGLN++
Sbjct: 135 ACLTQDQMTVAAYYTRLKKLWDELGSYND-TVCSCGADHK------RRRLMQFLMGLNES 187
Query: 752 FDGARSQILLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVENSALLSKTTGHEKPYIPX 931
++ R QILLM PLP + KAYS +V+ E+QRS A E ENSA++ I
Sbjct: 188 YNAIRGQILLMNPLPDVAKAYSSIVQEEKQRSLG-ATREMTENSAMV----------IRR 236
Query: 932 XXXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHGY-PDWFKQLKEQRR 1108
R L C +C + H C+KL+GY P+ K +
Sbjct: 237 AEPMALVVRHGQGSSSRSNPSNRKPLHCSYCDRDHHVRETCWKLNGYPPEHPKHASNRSN 296
Query: 1109 LGLKPVANLAETDHKNTTKAITENS--SDKGLQLGGISTLIQQEIAKYPCQQKSGGNIGN 1282
G H+++ + E + G+S L Q+I G +
Sbjct: 297 HGSTHFKR--NNSHQSSANNVKERPVMQEVPSMTNGLSDLQIQQILSI-----MQGLLQT 349
Query: 1283 TEYGHTYAHFAEYAGTFTSDDTHFALTASENLDKGSWILDTSASRHMCNNPSFMTDLNPV 1462
+ H I+D+ A+ H+ ++P+ + + +
Sbjct: 350 LLHLHRL------------------------------IIDSGATYHITSSPTLLVNSSKN 379
Query: 1463 NTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVPSFKYNLLSISYLIQKCNLKCIFY 1642
V P G +T G + L + L + L VPSFK +L+S+S + + N F+
Sbjct: 380 TFLPLVAMPSGEQAPITSIGNLPLNYVVTLKNALGVPSFKVDLMSVSRVTKDLNCSVTFF 439
Query: 1643 PSHCLIQDLRTDGTIVVGRAVGKLYILATQSSLQP---------TSCPSLTSFTTDSFLD 1795
P C++QDL T TI +G LY L +S +P TSC S +S T S
Sbjct: 440 PHWCILQDLTTRTTIGLGEQRDGLYYLVALASKKPKTQTPSAAATSCRSPSSQVTSSTA- 498
Query: 1796 MWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFD 1975
+WH+ LGH S S L+ + K L N ++ C VC +AKQ RLPF S+ +V F+
Sbjct: 499 LWHRCLGHLSSSRLDFMA--KHLLNFPFQSN-NACDVCALAKQRRLPFSVSSISSVRPFE 555
Query: 1976 LVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNT 2155
L+H DIWGPY + +++ Y LTIVDD SR W++ MHHKS+ LL NF V+ QF+
Sbjct: 556 LIHCDIWGPYKIASLSSAKYFLTIVDDYSRFTWVFFMHHKSETQHLLVNFFSFVQTQFHV 615
Query: 2156 NVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQ 2335
++ + R DNG EF S ++ F G +Q SCV+TPQQNG+VERKH H+L+ R FQ
Sbjct: 616 SIANIRVDNGGEFF--SMREFFKQKGTTYQHSCVYTPQQNGVVERKHCHILESARAFHFQ 673
Query: 2336 SKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQ- 2512
+ LP FW + T +IINRLPT L+ ++P+E LY P+YS ++ FGCL Y+ N
Sbjct: 674 AHLPLPFWAECVSTVVHIINRLPTPLLSRQTPFERLYGKLPSYSHIRVFGCLAYATNVHI 733
Query: 2513 PHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLT 2692
PH KFAPR +CIFLGY GQK +KLY+LDT Q+ SRDV FHE FP+ ++ + S +
Sbjct: 734 PH--KFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHETIFPYESIPSPSSNS 791
Query: 2693 PLPQVPITSSDL-----LDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISK 2857
P +P++ SDL +P +P + R S R
Sbjct: 792 D-PVIPLSISDLSPPVQQPSPPEPISPIQQPSLPNSVSTQPSPTSPPPEPILRRSQRPHH 850
Query: 2858 PPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANV 3037
PP L DYV + +FP + PL S
Sbjct: 851 PPMALRDYVCNQV--------------------------TFPNHLPPLSSSPQKDI---- 880
Query: 3038 STTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPD 3217
EP SY +A W EAM EL ALE N TW + LPPGK PIGC+WV+K+K + D
Sbjct: 881 ----EPTSYAEAASHSHWQEAMQSELAALEANHTWSLTSLPPGKKPIGCRWVYKIKRHSD 936
Query: 3218 GSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFL 3397
G+++R+KARLVAKGY Q+ G+DY D FSP AKM+ VR L+A+A +NWSLHQLD NNAFL
Sbjct: 937 GTIERFKARLVAKGYTQLEGIDYHDTFSPTAKMIIVRCLLALAAAQNWSLHQLDANNAFL 996
Query: 3398 HGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 3577
HG L E YM PP G R+ L KL N P
Sbjct: 997 HGDLHEEIYMSPPPGI----------------------RRQGENLLSKLLAL-FNPKP-- 1031
Query: 3578 PCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIA 3757
LF G F ALLIYVDD+L+TG++ I ALK +L + F IK LG +YFLG+E++
Sbjct: 1032 --LFTCRKGKSFTALLIYVDDILITGNDVNAIVALKQFLHSHFRIKALGDLKYFLGIEVS 1089
Query: 3758 RGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRL 3937
R G ++QRKY L+IL D G L KPV P+ Q +KL+ SG L +P +YR L GRL
Sbjct: 1090 RSKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNIKLS-DSGELLKDPSQYRRLFGRL 1148
Query: 3938 LYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAY 4117
+YL +TRPDITYSV LS+F+++P H +AAL ++RYLK P GLF+ S + L L A+
Sbjct: 1149 IYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAF 1208
Query: 4118 CDADWGSCPI 4147
D+DW CPI
Sbjct: 1209 SDSDWAGCPI 1218
>gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1352
Score = 797 bits (2058), Expect(2) = 0.0
Identities = 467/1240 (37%), Positives = 668/1240 (53%), Gaps = 24/1240 (1%)
Frame = +2
Query: 494 YELWNDLAERFGESNGPLLYQIQKEISNLTQGNSSVAVYFTKLKKLWDEYSSLVSWPTCT 673
Y W+ R+ +S+ + +Q E S++ QG+ S+ +FTKL+ +WDE + PTC+
Sbjct: 36 YHSWSRSISRYAQSDLLRISDLQHEASSIRQGDLSITEFFTKLRVIWDELENFRPDPTCS 95
Query: 674 C------GTVKQIMEMESHSKLIKFLMGLNDAFDGARSQILLMEPLPSLNKAYSMLVKIE 835
C + I + + + ++FL GLN+ + +S +LLM+P+P ++K +S +V+ E
Sbjct: 96 CTQKCSCNVIPTIAQRKREDQAMQFLRGLNEQYSNVKSHVLLMDPIPPISKIFSYVVQQE 155
Query: 836 RQRSATCAFPEPVENSALLSKTTGHEKPYIPXXXXXXXXXXXXXXXXXXKTKEERAKLLC 1015
RQ + + +A+++ + + C
Sbjct: 156 RQLLGSNFVANTITKTAIINAASS---------------------------------VTC 182
Query: 1016 EHCGVNGHEVSECFKLHGYPDWFKQLKEQ----RRLGLKPVANLAETDHKNTTK----AI 1171
+CG GH + C++ HG+P + + +G + N TD T I
Sbjct: 183 TYCGKQGHAENVCYRKHGFPSNHENKTNKGVYKASIGKTSIVNSTVTDECKTNDQQQATI 242
Query: 1172 TENSSDKGLQLGGISTLIQQEIAKYPCQQKSGGNIG-NTEYGHTYAHFAEYA----GTFT 1336
T++ Q + LIQQ C S + +T + H+ + + GT +
Sbjct: 243 TQDYRFTPQQYQVLMDLIQQ------CTNDSSASPSPSTNHIHSVSSCSTQPSPPPGTVS 296
Query: 1337 SDDTHFALTASENLDKGSWILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTH 1516
S TH ++ S W++D+ A+ H+ ++ S N +N ITV P G + TH
Sbjct: 297 SISTHTQISTS-------WVIDSGATDHVSSSLSNFFTYNSINP-ITVKLPTGQHVLATH 348
Query: 1517 SGKVHLTDSLILTDVLLVPSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVG 1696
+G V TD+ LTDVL +P FKYNL+SIS L+ +++ IFY +HCLIQD+ T I
Sbjct: 349 AGVVKFTDTFYLTDVLFIPEFKYNLISISKLVSSLDVQLIFYSTHCLIQDVNTKEKIGTV 408
Query: 1697 RAVGKLYILATQSSLQPTSCPSLTSFTTD-SFLDMWHKRLGHASFSLLEHLPFLKPLCNT 1873
LY + T + +QP+ ++ + +D+WH RLGH + L + P +
Sbjct: 409 DVEVGLYTMTT-AVVQPSILSAIYNPEWSIQNIDLWHFRLGHLPYDKLHSMKQYYPCLYS 467
Query: 1874 GAKTAIQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVD 2053
C CH AKQ +L FP S SHA+ F L+HIDIWGP S + + Y LTIVD
Sbjct: 468 NKHFT---CNTCHHAKQKKLSFPLSHSHALQSFALLHIDIWGPCSKTSIHGHRYFLTIVD 524
Query: 2054 DCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHG 2233
D +R W++LM K+ + NFI ++NQF T VK R+DNGAEF S + F S G
Sbjct: 525 DHTRYTWVFLMASKADTCNCVTNFISHIENQFATRVKVIRTDNGAEF---SMNNYFDSKG 581
Query: 2234 ILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSS 2413
I+HQ +C+ TP+QN IVERKH+HLL++ R L+FQS LP FW F+L+ A YIIN +PT
Sbjct: 582 IIHQTTCIETPEQNRIVERKHQHLLNVTRALLFQSNLPPTFWNFALMHATYIINCIPTPF 641
Query: 2414 LNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKL 2593
L SP+E L + + L+ FGCL Y + + H+ K PR C+FLG+ P KG+
Sbjct: 642 LQHTSPFENLNGKPCDITTLRVFGCLCYVSTLKAHRTKLDPRASPCVFLGFQPHTKGYLT 701
Query: 2594 YNLDTKQILVSRDVDFHEHSFPFHNL-TAISPLTPLPQVPITSSDLL-DTPLHVTTPAVS 2767
+NL+T+ I VSR+V F+E+ FP+ T + TP P TS+ ++ D + +P+
Sbjct: 702 FNLNTRSIEVSRNVVFYENHFPYFTQDTQSASSTPSLPTPFTSNPMIHDYNFYPPSPSSH 761
Query: 2768 ETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADY-VTSNAVAQFSSPAAVKP-DSP 2941
+R PP +L DY +T + SSP P DS
Sbjct: 762 PPH-----SLSSPESPTSSPIPSRPTRSRHPPSYLRDYHMTFTSTGPSSSPGIRYPLDSV 816
Query: 2942 RPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDA 3121
HP F + ++S EP SY +A K W++AM E+ A
Sbjct: 817 ISYNRLSHPFRHF---------------IMSISLLTEPKSYAEASKSDCWIKAMTDEITA 861
Query: 3122 LELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFS 3301
LE N TW + LPP K IGCKW++KVK + DGSV+R+KARLVAKGY Q+ G+D+ D F+
Sbjct: 862 LEANNTWTVTSLPPHKTAIGCKWIYKVKHHADGSVERHKARLVAKGYTQLEGLDFLDTFA 921
Query: 3302 PVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLK 3481
PVAK+ TV LL+++A I NW L QLDINNAFLHG L+E YM P G T PGQVC L
Sbjct: 922 PVAKLTTVHLLLSLAAIHNWFLKQLDINNAFLHGDLNEEVYMHLPPGLTTTTPGQVCKLN 981
Query: 3482 KSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSN 3661
+SLYGLKQASRQW L + + G + S D LF++ S ALL+YVDD+++ G++
Sbjct: 982 RSLYGLKQASRQWYARLSTFIMQQGFHHSSADHSLFLKFTNSACTALLVYVDDIVLAGND 1041
Query: 3662 DADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKP 3841
+I + + L F IKDLG YFLG+E+AR S L QRKY LDILSD GML C P
Sbjct: 1042 LTEIHQITALLHKTFKIKDLGDLTYFLGLEVARNSIEIHLCQRKYTLDILSDTGMLACCP 1101
Query: 3842 VVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDH 4021
T + L+ +G PL +P YR LIGRL+YL T PDIT++VQ LSQF + P T H
Sbjct: 1102 SSTLMDYKAALSSDTGTPLTDPSAYRQLIGRLIYLTNTHPDITHAVQHLSQFASKPTTYH 1161
Query: 4022 WDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSC 4141
AA ++RYLK P G+F +++SSL L ++ D+DW C
Sbjct: 1162 QHAAFRILRYLKQAPGRGIFLSANSSLQLKSFSDSDWAGC 1201
Score = 171 bits (432), Expect(2) = 0.0
Identities = 84/151 (55%), Positives = 108/151 (71%)
Frame = +1
Query: 4144 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 4323
DTR+SITG+ + LG LISWK KKQ TVS+SS+EAEYRAL++T CE+ WL+YL DF L
Sbjct: 1203 DTRRSITGFAVYLGHSLISWKSKKQATVSRSSSEAEYRALASTSCEIQWLTYLLEDFRLQ 1262
Query: 4324 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 4503
P L+CDNQ+ L I N VFHERTKH++IDCH+VR K + + +SS+ QLADI
Sbjct: 1263 FIRPALLYCDNQSVLQIACNQVFHERTKHIEIDCHLVREKVSNGLLKLLPVSSSAQLADI 1322
Query: 4504 LTKNLGSSQHSNISSKLGMLDLHSLPSLRGG 4596
TK L S+ + ++SKLGM D++S L GG
Sbjct: 1323 YTKALSPSRFNELNSKLGMSDIYS--QLAGG 1351
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 827 bits (2137), Expect = 0.0
Identities = 492/1346 (36%), Positives = 738/1346 (54%), Gaps = 24/1346 (1%)
Frame = +2
Query: 179 TGADGKTQLVQQVADPFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFIN 358
+G D TQ PF L ++DHPGLS++S L Y W AM I+L AK KLGF++
Sbjct: 56 SGFDDPTQ------SPFFLHSADHPGLSIISHRLDETTYGDWSVAMRISLDAKNKLGFVD 109
Query: 359 GQIVAPDSNSPDYDNWKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESN 538
G + P + P++ W + + MV +W+LNS+ I + + ++ A ++W DL +RF +N
Sbjct: 110 GSLPRPLESDPNFRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDATDIWRDLFDRFNLTN 169
Query: 539 GPLLYQIQKEISNLTQGNSSVAVYFTKLKKLWDEYSSLVSWPT-CTCGTVKQIMEMESHS 715
P Y + +EI +L QG S++ Y+T LK LWD+ S + CTCG ++ + +
Sbjct: 170 LPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWDQLDSTEALDDPCTCGKAVRLYQKAEKA 229
Query: 716 KLIKFLMGLNDAFDGARSQILLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVE---NSA 886
K++KFL GLN+++ R QI+ + LPSL + Y +L + Q+ P +
Sbjct: 230 KIMKFLAGLNESYAIVRRQIIAKKALPSLAEVYHILDQDNSQKGFFNVVAPPAAFQVSEV 289
Query: 887 LLSKTTGHEKPYIPXXXXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLH 1066
S T E Y+ ++ + + C C GH C+K H
Sbjct: 290 SHSPITSPEIMYV-------------------QSGPNKGRPTCSFCNRVGHIAERCYKKH 330
Query: 1067 GYPDWFKQLKEQRRLGLKPVANLAE---TDHKNTTKAITENSSDKGLQLGGISTLIQQEI 1237
G+P F + KP A A+ + K T + T + Q+ + L ++
Sbjct: 331 GFPPGFTPKGKSSDKPPKPQAVAAQVTLSPDKMTGQLETLAGNFSPDQIQNLIALFSSQL 390
Query: 1238 AKYPCQQKSGGNIGNTEYGHTYAHFAEYAGTFTSDDTHF---ALTASEN-LDKGSWILDT 1405
Q ++++ + + +G S T+ L S N L +W++D+
Sbjct: 391 QP----QIVSPQTASSQHEASSSQSVAPSGILFSPSTYCFIGILAVSHNSLSSDTWVIDS 446
Query: 1406 SASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVPSFKY 1585
A+ H+ ++ L+ V+ P G ++ G V + +IL +VL +P F+
Sbjct: 447 GATHHVSHDRKLFQTLDTSIVSF-VNLPTGPNVRISGVGTVLINKDIILQNVLFIPEFRL 505
Query: 1586 NLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQSSLQPTSCPSL 1765
NL+SIS L + IF PS C IQDL T+ G+ +G LY+L TQS P++
Sbjct: 506 NLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLDTQS-------PAI 558
Query: 1766 TSFTTDSFLDMWHKRLGHASFSLLEHLP-FLKPLCNTGAKTAIQQCVVCHMAKQHRLPFP 1942
S + +WHKRLGH SFS L+ L L + K+A C VCH+AKQ +L FP
Sbjct: 559 -SVNAVVDVSVWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAY--CHVCHLAKQKKLSFP 615
Query: 1943 TSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLEN 2122
++ + + F+L+HID+WGP+S V Y LTIVDD SR W+YL+ KS V +
Sbjct: 616 SANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKSDVLTVFPA 675
Query: 2123 FILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRH 2302
FI +V+NQ++T VKS RSDN E + + + + GI+ SC TP+QN +VERKH+H
Sbjct: 676 FIDLVENQYDTRVKSVRSDNAKEL---AFTEFYKAKGIVSFHSCPETPEQNSVVERKHQH 732
Query: 2303 LLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPF 2482
+L++ R LMFQS + +W +LTA ++INR P++ L+ K+P+EVL P+YS LK F
Sbjct: 733 ILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTF 792
Query: 2483 GCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPF 2662
GCL YS+ + + KF PR C+FLGY G KG+KL +L++ + +SR+V+FHE FP
Sbjct: 793 GCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHEELFPL 852
Query: 2663 HN-----LTAISPLTPLPQVPITSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXX 2827
+ TA TP+ P++S + + + H+ +P +S +
Sbjct: 853 ASSQQSATTASDVFTPMD--PLSSGNSITS--HLPSPQISPSTQI--------------- 893
Query: 2828 XXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHS-FPYT-ISPL 3001
+ RI+K P L DY F + K DS HPI S Y+ ISP
Sbjct: 894 ---SKRRITKFPAHLQDYH-----CYFVN----KDDS--------HPISSSLSYSQISP- 932
Query: 3002 FHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIG 3181
+++ ++ N+S P SY +A W A+ +E+ A+E +TW++ LPPGK +G
Sbjct: 933 ---SHMLYINNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVG 989
Query: 3182 CKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNW 3361
CKWVF VK + DGS++R+KAR+VAKGY Q G+DY + FSPVAKM TV+LL+ ++ K W
Sbjct: 990 CKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKW 1049
Query: 3362 SLHQLDINNAFLHGHLDESFYMLPPDGYTKGK-----PGQVCFLKKSLYGLKQASRQWNT 3526
L+QLDI+NAFL+G L+E+ YM PDGY K P VC LKKS+YGLKQASRQW
Sbjct: 1050 YLNQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFL 1109
Query: 3527 ELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLF 3706
+ + L G + D LF+R GS F+ LL+YVDD+++ + + Q+L L F
Sbjct: 1110 KFSNSLLALGFEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASF 1169
Query: 3707 TIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQS 3886
+++LG +YFLG+E+AR S G L+QRKY L++L+ ML CKP P+ ++L+
Sbjct: 1170 KLRELGPLKYFLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKND 1229
Query: 3887 GRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCP 4066
G L++ + YR L+G+L+YL +TRPDIT++V +L QF ++P T H A +++Y+KG
Sbjct: 1230 GLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTV 1289
Query: 4067 SLGLFYASSSSLDLTAYCDADWGSCP 4144
GLFY++ L L Y DADWG+CP
Sbjct: 1290 GQGLFYSAEDDLTLKGYTDADWGTCP 1315
Score = 132 bits (333), Expect = 2e-27
Identities = 68/146 (46%), Positives = 98/146 (67%)
Frame = +1
Query: 4132 GFMPDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHD 4311
G PD+R+S TG+ + +G LISW+ KKQ TVS+SSAEAEYRAL+ CE+ WLS L
Sbjct: 1312 GTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLA 1371
Query: 4312 FSLPLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQ 4491
+ +P+ L+ D+ AA++I NPVFHERTKH++IDCH VR K + + + + Q
Sbjct: 1372 LRVHSGVPI-LYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQ 1430
Query: 4492 LADILTKNLGSSQHSNISSKLGMLDL 4569
+ADILTK L Q +++ SK+ + ++
Sbjct: 1431 VADILTKPLFPYQFAHLLSKMSIQNI 1456
>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
Length = 1322
Score = 794 bits (2050), Expect(2) = 0.0
Identities = 498/1300 (38%), Positives = 692/1300 (53%), Gaps = 22/1300 (1%)
Frame = +2
Query: 314 MLIALGAKTKLGFINGQIVAPDS-NSPD-YDNWKKVDYMVTNWILNSLGKDIVDAFIYVD 487
M I+L AK+KLGFI+G P + + PD + +WKK + M+ +WILNSL +D+ D+ I+
Sbjct: 1 MTISLNAKSKLGFIDGTTTMPSATDKPDEHASWKKCNDMILSWILNSLSQDLADSVIFST 60
Query: 488 SAYELWNDLAERFGESNGPLLYQIQKEISNLTQGNSSVAVYFTKLKKLWDEYSSLVSWPT 667
+A E+W DL +RF +SN P ++QI++ I+ LTQ +VA Y+T+LKKLWDE S
Sbjct: 61 TAQEVWEDLRDRFSQSNAPRIFQIERGIACLTQDQMTVAAYYTRLKKLWDELGSYND-TV 119
Query: 668 CTCGTVKQIMEMESHSKLIKFLMGLNDAFDGARSQILLMEPLPSLNKAYSMLVKIERQRS 847
C+CG + +L++FLMGLN++++ R QILLM PLP++ KAYS +V+ E+QRS
Sbjct: 120 CSCGADYK------RRRLMQFLMGLNESYNAIRGQILLMNPLPNVAKAYSSIVQEEKQRS 173
Query: 848 ATCAFPEPVENSALLSKTTGHEKPYIPXXXXXXXXXXXXXXXXXXKTKEERAKLLCEHCG 1027
A E ENSA++ + R L C +C
Sbjct: 174 LG-ATRETTENSAMVVRRA----------EPMALAVRHGQGSSSRSNPSNRKPLHCSYCD 222
Query: 1028 VNGHEVSECFKLHGYP-DWFKQLKEQRRLGLKPVANLAETDHKNTTKAITENS--SDKGL 1198
+ H C+KL+GYP + K + G H+++ + E+ +
Sbjct: 223 RDHHVRETCWKLNGYPPEHPKHASNRSNHGSTHFKR--NNSHQSSANNVNEHPVMQEVPS 280
Query: 1199 QLGGISTLIQQEIAKYPCQQKSGGNIGNTEYGHTYAHFAEYAGTFTSDDTHFALTASENL 1378
G+S L Q+I Q K G T+ + A+ A T H
Sbjct: 281 MTNGLSDLQIQQILSI-MQGK-----GTTQSTNPKANAAASGLLQTLLHLH--------- 325
Query: 1379 DKGSWILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTD 1558
I+D+ A+ H+ ++P+ + + + V P G +T G + L ++ L +
Sbjct: 326 ---RLIIDSGATDHITSSPTLLVNSSKNTLLPLVGMPSGEQAPITSIGNLPLNPAVTLKN 382
Query: 1559 VLLVPSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQSS 1738
VL VPSFK +L+S+S + + N F+P C++QDL T TI +G LY L +S
Sbjct: 383 VLGVPSFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDGLYYLVALAS 442
Query: 1739 LQP---------TSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAI 1891
+P TSC S +S T S +WH RLGH S S L+ + K L N ++
Sbjct: 443 EKPKNQTPSAAATSCRSPSSQVTSSTA-LWHHRLGHLSSSRLDFMA--KHLLNFPFQSN- 498
Query: 1892 QQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGV 2071
C VC +AKQ RLPF S+ ++ F+L+H DIWGPY + ++
Sbjct: 499 NACDVCALAKQRRLPFSVSSISSIRPFELIHCDIWGPYKIASLS---------------- 542
Query: 2072 WLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKS 2251
+ R DNG EF S ++ F G +Q S
Sbjct: 543 ------------------------------ANIRVDNGGEFFS--MREFFKQKGTTYQHS 570
Query: 2252 CVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSP 2431
CV+TPQQNG+VERKHRH+L+ R FQ+ LP FW + TA +IINRLPT L+ ++P
Sbjct: 571 CVYTPQQNGVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTP 630
Query: 2432 YEVLYSHTPNYSLLKPFGCLVYSANTQ-PHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDT 2608
+E LY P+YS ++ FGCL Y+ N PHK FAPR +CIFLGY GQK +KLY+LDT
Sbjct: 631 FERLYGKLPSYSHIRVFGCLAYATNVHVPHK--FAPRAKRCIFLGYPVGQKAYKLYDLDT 688
Query: 2609 KQILVSRDVDFHEHSFPFHNLTAISPLTPLPQVPITSSDLLD-----TPLHVTTPAVSET 2773
Q+ SRDV FHE FP+ ++ + S + P +P++ SDL +P +P +
Sbjct: 689 HQMFTSRDVVFHETIFPYESIPSPSSNSD-PVIPLSISDLSPPVQQPSPPEPISPIQQPS 747
Query: 2774 EFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTT 2953
R S R PP L DYV + Q + P + P S P
Sbjct: 748 LPNSVSTQPSHASPPPEPILRRSQRPHHPPMALRDYVCN----QVTFPNHLPPLSSSPQK 803
Query: 2954 GTPHPIHSFP--YTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALE 3127
GT +P+ +F + SP + SF A VS EP SY +A W EAM EL ALE
Sbjct: 804 GTRYPLCNFVSYHRYSP----QHRSFTAAVSQDIEPTSYAEAASHSHWQEAMQSELAALE 859
Query: 3128 LNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPV 3307
N TW + LP GK PIGC+WV+K+K + DG+++R+KARLVAKGY Q+ G+DY D FSP
Sbjct: 860 ANHTWSLTSLPLGKKPIGCRWVYKIKRHSDGTIERFKARLVAKGYTQLEGIDYHDTFSPT 919
Query: 3308 AKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKS 3487
AKM+TVR L+A+A +NWSLHQLD+NNAFLHG L E YM PP G
Sbjct: 920 AKMITVRCLLALAAAQNWSLHQLDVNNAFLHGDLHEEIYMSPPPG--------------- 964
Query: 3488 LYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDA 3667
RQ + G QS D LF G F+ALLIYVDD+L+TG++
Sbjct: 965 ------LRRQGENLFSTAIQAAGFVQSKADYSLFTCRKGKSFIALLIYVDDILITGNDAN 1018
Query: 3668 DIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVV 3847
I ALK +L + F IKDLG +YFLG+E++R G ++QRKY L+IL D G L KPV
Sbjct: 1019 AIVALKQFLHSDFRIKDLGDLKYFLGIEVSRSKKGISISQRKYTLEILKDGGFLGAKPVN 1078
Query: 3848 TPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWD 4027
P+ Q +KL+ S L +P +YR L+GRL+YL +TRPDITYSV LS+F+++P H +
Sbjct: 1079 FPMEQNIKLS-DSSELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHME 1137
Query: 4028 AALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCPI 4147
AAL ++RYLK P GLF+ S + L L A+ D+DW CPI
Sbjct: 1138 AALRVLRYLKNSPGQGLFFPSQNDLSLRAFSDSDWAGCPI 1177
Score = 167 bits (424), Expect(2) = 0.0
Identities = 80/145 (55%), Positives = 101/145 (69%)
Frame = +1
Query: 4141 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 4320
P +R+S TGYC+ LG LISW+ K+Q TVS SSAEAEYRA++ T CEL WL L D +
Sbjct: 1176 PISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMTGTCCELSWLRSLLKDLRI 1235
Query: 4321 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 4500
P L+CDN ALHI ANPVFHERT+H+++DCH +R K +D + K I+ST QLAD
Sbjct: 1236 LHPKPALLYCDNTTALHIAANPVFHERTRHIEMDCHFIREKIQDGSFVTKHIASTNQLAD 1295
Query: 4501 ILTKNLGSSQHSNISSKLGMLDLHS 4575
+ TK LG S + KLG+LD+HS
Sbjct: 1296 VFTKPLGKETFSTMIHKLGVLDIHS 1320
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 810 bits (2092), Expect = 0.0
Identities = 480/1368 (35%), Positives = 727/1368 (53%), Gaps = 20/1368 (1%)
Frame = +2
Query: 98 VMAPPRNTRNTRAAAWNTIADDDEANGTGADGKTQLVQQVADPFPLTNSDHPGLSLVSSP 277
V PP + R+ A + + + T + PF L ++DHPGL+++S
Sbjct: 31 VTTPPNSPPVNRSGASRALTSSESGDPTQS------------PFFLHSADHPGLNIISHR 78
Query: 278 LTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDSNSPDYDNWKKVDYMVTNWILNSLGK 457
L NY W AMLI+L AK K GFI+G + P + ++ W + + MV +W+LNS+
Sbjct: 79 LDETNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMVKSWLLNSVSP 138
Query: 458 DIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEISNLTQGNSSVAVYFTKLKKLWD 637
I + + ++ A ++W DL RF +N P Y + +EI + QG S++ Y+T+LK LWD
Sbjct: 139 QIYRSILRMNDASDIWRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTLWD 198
Query: 638 EYSSLVSWPT-CTCGTVKQIMEMESHSKLIKFLMGLNDAFDGARSQILLMEPLPSLNKAY 814
+ S + CTCG ++ + +K++KFL GLN+++ R QI+ + LPSL + Y
Sbjct: 199 QLDSTEALDEPCTCGKAMRLQQKAEQAKIVKFLAGLNESYAIVRRQIIAKKALPSLGEVY 258
Query: 815 SMLVKIERQRSATCAFPEPVENSALLSKTTGHEKPYIPXXXXXXXXXXXXXXXXXXKTKE 994
+L + Q+S F V A + + P + +
Sbjct: 259 HILDQDNSQQS----FSNVVAPPAAFQVSEITQSPSMDPTVCYV------------QNGP 302
Query: 995 ERAKLLCEHCGVNGHEVSECFKLHGYPDWFKQLKEQRRLGLKP---VANLAETDHKNTT- 1162
+ + +C GH C+K HG+P F + KP AN+AE+ NT+
Sbjct: 303 NKGRPICSFYNRVGHIAERCYKKHGFPPGFTPKGKAGEKLQKPKPLAANVAESSEVNTSL 362
Query: 1163 KAITENSSDKGLQLGGISTLIQQEIAKYPCQQKSGGNIGNTEYGHTYAHFAEYAGTFTSD 1342
+++ N S + LQ Q IA + Q + N + Y ++ G S
Sbjct: 363 ESMVGNLSKEQLQ---------QFIAMFSSQLQ---NTPPSTYATASTSQSDNLGICFSP 410
Query: 1343 DTHFAL----TASENLDKGSWILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIV 1510
T+ + A L +W++D+ A+ H+ ++ S + L+ + V+ P G T +
Sbjct: 411 STYSFIGILTVARHTLSSATWVIDSGATHHVSHDRSLFSSLD-TSVLSAVNLPTGPTVKI 469
Query: 1511 THSGKVHLTDSLILTDVLLVPSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIV 1690
+ G + L D ++L +VL +P F+ NL+SIS L + IF + C IQDL +
Sbjct: 470 SGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLG 529
Query: 1691 VGRAVGKLYILATQSSLQPTSCPSLTSFTTDSFLD--MWHKRLGHASFSLLEHLPFLKPL 1864
GR V LY+L S + ++ +D MWH+RLGHAS L+ + L
Sbjct: 530 QGRRVANLYLLDVGDQ----------SISVNAVVDISMWHRRLGHASLQRLDAIS--DSL 577
Query: 1865 CNTGAKTAIQQ-CVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYML 2041
T K C VCH+AKQ +L FPTS +FDL+HID+WGP+S V Y L
Sbjct: 578 GTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFL 637
Query: 2042 TIVDDCSRGVWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLF 2221
TIVDD SR W+YL+ KS+V + FI V+NQ+ VK+ RSDN E S +
Sbjct: 638 TIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPELKFTS---FY 694
Query: 2222 HSHGILHQKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRL 2401
GI+ SC TP+QN +VERKH+H+L++ R LMFQS++P W +LTA ++INR
Sbjct: 695 AEKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRT 754
Query: 2402 PTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQK 2581
P+ L K+PYE+L P Y L+ FGCL YS+ + + KF PR C+FLGY G K
Sbjct: 755 PSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYK 814
Query: 2582 GFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTPL--PQVPITSSDLLDTPLHVTT 2755
G+KL +L++ + +SR+V FHE FP L P VP++S + DT +
Sbjct: 815 GYKLMDLESNTVFISRNVQFHEEVFPLAKNPGSESSLKLFTPMVPVSSGIISDT---THS 871
Query: 2756 PAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPD 2935
P+ ++ + +S R+ KPP L DY + ++ D
Sbjct: 872 PSSLPSQISDLPPQI------------SSQRVRKPPAHLNDYHCNT----------MQSD 909
Query: 2936 SPRPTTGTPHPIHSFPYT-ISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKE 3112
P + T Y+ ISP +++ ++ N++ P +Y +A W EA+ E
Sbjct: 910 HKYPISST------ISYSKISP----SHMCYINNITKIPIPTNYAEAQDTKEWCEAVDAE 959
Query: 3113 LDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWD 3292
+ A+E TW++ LP GK +GCKWVF +K DG+++RYKARLVAKGY Q G+DY D
Sbjct: 960 IGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDYTD 1019
Query: 3293 CFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGK----P 3460
FSPVAKM T++LL+ ++ K W L QLD++NAFL+G L+E +M P+GY + K P
Sbjct: 1020 TFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERKGIVLP 1079
Query: 3461 GQVCF-LKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVD 3637
V LK+S+YGLKQASRQW + L G ++ D LF++ F+ +L+YVD
Sbjct: 1080 SNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIVLVYVD 1139
Query: 3638 DVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSD 3817
D+++ +++A L LD F ++DLG +YFLG+E+AR +AG + QRKY L++L
Sbjct: 1140 DIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYALELLQS 1199
Query: 3818 LGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQF 3997
GML CKPV P+ LK+ G +++ ++YR ++G+L+YL +TRPDIT++V +L QF
Sbjct: 1200 TGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQF 1259
Query: 3998 INSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSC 4141
++P T H AA +++Y+KG GLFY++SS L L + D+DW SC
Sbjct: 1260 SSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASC 1307
Score = 129 bits (324), Expect = 2e-26
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Frame = +1
Query: 4144 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 4323
D+R+S T + + +G LISW+ KKQ TVS+SSAEAEYRAL+ CE++WL L SL
Sbjct: 1309 DSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLL--VSLQ 1366
Query: 4324 LQLPVP-LFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 4500
PVP L+ D+ AA++I NPVFHERTKH+ +DCH VR + + + + + Q+AD
Sbjct: 1367 ASPPVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVAD 1426
Query: 4501 ILTKNLGSSQHSNISSKLGMLDLHSLPS 4584
ILTK L Q ++ SK+ +L++ S S
Sbjct: 1427 ILTKPLFPYQFEHLKSKMSILNIFSCSS 1454
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 800 bits (2066), Expect = 0.0
Identities = 484/1342 (36%), Positives = 717/1342 (53%), Gaps = 33/1342 (2%)
Frame = +2
Query: 215 VADPFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDSNSPD 394
V P L N+DHPG+S+VS L G NY W AM IAL AK K+ FI+G P+ +
Sbjct: 50 VHSPLFLHNADHPGISIVSVQLDGANYNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHL 109
Query: 395 YDNWKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEIS 574
W + + MV +WILNS+ ++I + + D A ++WNDL RF +N P +Q+ ++I
Sbjct: 110 LRIWSRCNSMVKSWILNSVNREIYGSILSFDDAAQIWNDLHNRFHMTNLPRTFQLVQQIQ 169
Query: 575 NLTQGNSSVAVYFTKLKKLWDEYSSLVSWPTCTCGTVKQIMEMESHSK-------LIKFL 733
+L QG+ +++ Y+T LK L D + C C K E + +K +IKFL
Sbjct: 170 DLRQGSMNLSTYYTTLKTLRDNLDGAEASVPCHC-CKKSTCESQIFAKSNVNRGRIIKFL 228
Query: 734 MGLNDAFDGARSQILLMEPLPSLNKAYSMLVKIERQRS-----ATCAFP---EPVENSAL 889
GLN+ + R QI++ +PLP L + Y++L + + QR A+ AF + V+ AL
Sbjct: 229 AGLNEKYSIIRGQIIMKKPLPDLAEVYNILDQDDSQRQFSNNVASAAFQVTKDDVQPGAL 288
Query: 890 LSKTTGHEKPYIPXXXXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHG 1069
S + + + +++ K +C H G GH C+KLHG
Sbjct: 289 ASSSNMPQPGML------------------GAVQKKDKKSICSHYGYTGHTSERCYKLHG 330
Query: 1070 YP-DWFKQLKEQRRLGLKPVANLAETDHKNTTKAITENSSDK--GLQ--LGGIST-LIQQ 1231
YP W K ++ ++ A + T +T NS + GL+ +G +S IQ
Sbjct: 331 YPVGWKKGKSFYEKIAQASQSSQAPKPNSAVTAQVTGNSQNTPAGLESLIGNMSKDQIQN 390
Query: 1232 EIAKYPCQQKSGGNIGNTEYGHTYAHFAEYAG-TFTSDDTHFA--LTASEN-LDKGSWIL 1399
IA + Q + + NT T +H + +G TF+S F LT SE + G+WI+
Sbjct: 391 LIALFSSQLQPASPVLNTAPMST-SHNNDPSGITFSSSTFSFIGILTVSETEMTHGTWIV 449
Query: 1400 DTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVPSF 1579
D+ A+ H+C+ +L+ H V+ P G+T V G + + LIL +VL +P F
Sbjct: 450 DSGATHHVCHVKDMFLNLDTSVQH-HVNLPTGTTIRVGGVGNIAVNADLILKNVLYIPEF 508
Query: 1580 KYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQSSLQPTSCP 1759
+ NLLS+S L + +F P+ C++ DL TI L I T++
Sbjct: 509 RLNLLSVSALTTDIGARVVFDPTCCVVHDLTKGSTIGSDLLTDVLGIFKTKNK------- 561
Query: 1760 SLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVCHMAKQHRLPF 1939
+ C +C AKQ +L +
Sbjct: 562 ------------------------------------------GLLHCDICQRAKQKKLTY 579
Query: 1940 PTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLE 2119
P+ + + FDL+HID+WGP+S Y LTIVDD +R W+YLM +KS V +
Sbjct: 580 PSRHNICLAPFDLLHIDVWGPFSEPTQEGYHYFLTIVDDHTRVTWVYLMKYKSDVLTIFP 639
Query: 2120 NFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHR 2299
+FI MV+ Q++T VK+ RSDN E ++L+ GI+ SC TP+QN +VERKH+
Sbjct: 640 DFITMVETQYDTKVKAVRSDNAPEL---KFEELYRRKGIVAYHSCPETPEQNSVVERKHQ 696
Query: 2300 HLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKP 2479
H+L++ R L+FQS++P +W +LTA +IINR P+ ++ K+ +E+L P+Y+ LK
Sbjct: 697 HILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKKVPDYTHLKS 756
Query: 2480 FGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFP 2659
FGCL Y++ + + KF R C FLGY G KG+KL +L++ I +SR+V F+E FP
Sbjct: 757 FGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYEDLFP 816
Query: 2660 FHNLTAISPLTPL--PQVPITSSDLLDT-PLHVTTPAVSETEFAXXXXXXXXXXXXXXXX 2830
F A + + + P + + +D + PL V + S
Sbjct: 817 FKTKPAENEESSVFFPHIYVDRNDSHPSQPLPVQETSASNVP-----------------A 859
Query: 2831 XRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHS 3010
+ +SR+S+PP +L DY ++ T+ T HPI S + S L
Sbjct: 860 EKQNSRVSRPPAYLKDYHCNSV-----------------TSSTDHPI-SEVLSYSSL-SD 900
Query: 3011 TYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKW 3190
Y+ F+ V+ EPH+Y QA + W +AM E+ ALE N TW + LP GK +GCKW
Sbjct: 901 PYMIFINAVNKIPEPHTYAQARQIKEWCDAMGMEITALEDNGTWVVCSLPVGKKAVGCKW 960
Query: 3191 VFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLH 3370
V+K+K+N DGS++RYKARLVAKGY Q G+DY D FSPVAK+ TV+LL+A+A K WSL
Sbjct: 961 VYKIKLNADGSLERYKARLVAKGYTQTEGLDYVDTFSPVAKLTTVKLLIAVAAAKGWSLS 1020
Query: 3371 QLDINNAFLHGHLDESFYMLPPDGYTKGK-----PGQVCFLKKSLYGLKQASRQWNTELC 3535
QLDI+NAFL+G LDE YM P GY+ + P VC LKKSLYGLKQASRQW +
Sbjct: 1021 QLDISNAFLNGSLDEEIYMTLPPGYSPRQGDSFPPNAVCRLKKSLYGLKQASRQWYLKFS 1080
Query: 3536 DKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIK 3715
+ L G QS D LF R + ++A+L+YVDD+++ S D + + L+ L ++
Sbjct: 1081 ESLKALGFTQSSGDHTLFTRKSKNSYMAVLVYVDDIIIASSCDRETELLRDALQRSSKLR 1140
Query: 3716 DLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRP 3895
DLG RYFLG+EIAR + G + QRKY L++L++ G+L CK P+ KL+ + G
Sbjct: 1141 DLGTLRYFLGLEIARNTDGISICQRKYTLELLAETGLLGCKSSSVPMEPNQKLSQEDGEL 1200
Query: 3896 LDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLG 4075
+D+ + YR L+G+L+YL TRPDITY+V +L QF ++P H A ++ YLKG G
Sbjct: 1201 IDDAEHYRKLVGKLMYLTFTRPDITYAVHRLCQFTSAPRVPHLKAVYKIIYYLKGTVGQG 1260
Query: 4076 LFYASSSSLDLTAYCDADWGSC 4141
LFY+++ L L+ + D+D+ SC
Sbjct: 1261 LFYSANVDLKLSGFADSDFSSC 1282
Score = 121 bits (303), Expect = 7e-24
Identities = 60/124 (48%), Positives = 80/124 (64%)
Frame = +1
Query: 4144 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 4323
D+RK TGYC+ LG L++WK KKQ +S SSAEAEY+A+S V E++WL +L D +
Sbjct: 1284 DSRKLTTGYCMFLGTSLVAWKSKKQEVISMSSAEAEYKAMSMAVREMMWLRFLLEDLWID 1343
Query: 4324 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 4503
+ L+CDN AA+HI NPVFHERTKH++ D H +R K I + + QLADI
Sbjct: 1344 VSEASVLYCDNTAAIHIANNPVFHERTKHIERDYHHIREKIILGLIRTLHVRTENQLADI 1403
Query: 4504 LTKN 4515
K+
Sbjct: 1404 PYKS 1407
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 744 bits (1922), Expect(2) = 0.0
Identities = 431/1049 (41%), Positives = 587/1049 (55%), Gaps = 5/1049 (0%)
Frame = +2
Query: 1013 CEHCGVNGHEVSECFKLHGYPDWFKQLKEQRRLGLKPVANLAETDHKNTTKAITENSSDK 1192
C HCG GH + C++ HG+P G KP+++ + + T S +
Sbjct: 1 CTHCGKTGHTIEVCYQKHGFPP-----------GSKPLSDKTASVNHTVTGDCKVTESTQ 49
Query: 1193 GLQLGGISTLIQQEIAKYPCQQKSGGNIGNTEYGHTYAHFAEYAGTFTSDDTHFALTASE 1372
L+ + QQ A Q+S GT S T F + S
Sbjct: 50 SLESQDVRFTPQQYQALLALIQQST------------------TGTSASC-TSFPIVCSA 90
Query: 1373 NLDKGSWILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLIL 1552
SWILD+ A+ H+ + S + +P+N I V P G THSG V T+S L
Sbjct: 91 ISTPSSWILDSGATDHVSSTLSHFSSFSPINP-IDVKLPTGQHVSATHSGIVKFTNSFYL 149
Query: 1553 TDVLLVPSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQ 1732
DVL +P F YNL+SIS L+ + + IF C+IQ+ T I G LY T
Sbjct: 150 VDVLYIPDFTYNLISISKLVSSLSCQFIFDRHSCIIQETNTMKKIGTVDVNGGLYSF-TA 208
Query: 1733 SSLQPTSCPSLTSFTTDSF--LDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVV 1906
+++ S S+ S +D+WH R+GH S L+ + P + + C
Sbjct: 209 NNIHNPSTNSIIVHPKCSIQPIDLWHFRMGHLSQERLQLMKQSFPFLSVDKSFS---CNT 265
Query: 1907 CHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLM 2086
CH KQ +L FP S S+A+ FDL+H+DIWGP + + Y L IVDD +R WL+LM
Sbjct: 266 CHHDKQKKLSFPLSHSYALQPFDLLHMDIWGPCPVTSMHGHKYFLAIVDDHTRFTWLFLM 325
Query: 2087 HHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTP 2266
+KS+ + + NFI V+ QF+ NVK R+DNG EF S F S GI+HQ +CV TP
Sbjct: 326 QNKSETRQHIINFINQVETQFDKNVKVIRTDNGLEF---SMTQYFSSKGIIHQTTCVETP 382
Query: 2267 QQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLY 2446
QQNGIVERKH+HLL++ R+L+FQ+ LPS FW F+L AA++IN +PT L+ SP+E LY
Sbjct: 383 QQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEKLY 442
Query: 2447 SHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVS 2626
H + S+L+ FGCL YS+ H+ K PR + CIFLG+ P KG+ L NL T +LVS
Sbjct: 443 GHPCDISILRVFGCLCYSSIITSHRTKLDPRAHPCIFLGFKPHTKGYLLVNLHTHGLLVS 502
Query: 2627 RDVDFHEHSFP-FHNLTAISPLTPLPQVPITSSDLLDTPLHVTTPAVSETEFAXXXXXXX 2803
++V FHE FP F + S +P+P +P +D P+ +
Sbjct: 503 QNVIFHEDHFPSFTKPNSPSFSSPVP-IPYNYADY---------PSFPSSSIVESSEPPP 552
Query: 2804 XXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFP 2983
R S+R +PP +L D+ A P +TG HP+HSF
Sbjct: 553 PDQHSSPPPLRRSTRPRRPPTYLQDF-----------HGAFTSTGPHSSTGIRHPLHSFI 601
Query: 2984 Y--TISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDL 3157
+SP FH ++ ++S+ +P ++ +A K W++AMH+E+ ALE N TW + L
Sbjct: 602 SYDRLSPSFHH----YVFSISSVTKPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTL 657
Query: 3158 PPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLV 3337
PP K IGC+WV+KVK DGS+DRYKARLVAKGY Q+ G+D++D FSPVAK+ TVRLL+
Sbjct: 658 PPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLI 717
Query: 3338 AIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQ 3517
++A I N L QLD+NN+FLHG L+E YM P G T PGQVC L++SLYGLKQASRQ
Sbjct: 718 SLAAIHNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQ 777
Query: 3518 WNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLD 3697
W L L + G SP D LF++ + A+LIYVDD+++ G++ +I L S L
Sbjct: 778 WYARLSSFLIQHGYVPSPSDHSLFLKCSPAITTAILIYVDDIVLAGNDLTEIHHLTSLLH 837
Query: 3698 TLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLA 3877
F IKDLG +YFLG+E+AR G L QRKY LD+LSD GML KPV TP+ L+
Sbjct: 838 NTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDTGMLASKPVSTPMDYSTHLS 897
Query: 3878 GQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLK 4057
SG P + YR L+GRL+YL TRP I Y+VQQLSQF+++P T H A ++ YLK
Sbjct: 898 ASSGTPFTDTAAYRRLVGRLIYLPNTRPAIAYAVQQLSQFVSNPPTAHRQALFRILCYLK 957
Query: 4058 GCPSLGLFYASSSSLDLTAYCDADWGSCP 4144
G P G+F + +SS+ L A+ D DW CP
Sbjct: 958 GTPGSGIFLSVNSSVQLRAFSDYDWAGCP 986
Score = 181 bits (459), Expect(2) = 0.0
Identities = 92/152 (60%), Positives = 111/152 (73%)
Frame = +1
Query: 4141 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 4320
PDTR+SITG+ + LG LISWK KKQ TVS+SS+EAEYRAL+TT CEL WLSYL DF +
Sbjct: 986 PDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHI 1045
Query: 4321 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 4500
L P L+CDNQ AL I +NP+FHERTKH++IDCHIVR+K + +SS+LQLAD
Sbjct: 1046 DLIRPSILYCDNQFALQIASNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLAD 1105
Query: 4501 ILTKNLGSSQHSNISSKLGMLDLHSLPSLRGG 4596
ILTK L + SKLGML++HS L GG
Sbjct: 1106 ILTKPLSPFVFHSHYSKLGMLNIHS--QLEGG 1135
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 774 bits (1998), Expect = 0.0
Identities = 471/1329 (35%), Positives = 703/1329 (52%), Gaps = 30/1329 (2%)
Frame = +2
Query: 170 ANGTGADGKTQ-LVQQVADPFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKL 346
AN +G Q L + + L D+PG LVS TG NY+ W R+M IAL K K+
Sbjct: 2 ANSHSLNGPVQNLSDDSSSCYYLHPFDNPGALLVSKIFTGENYIAWSRSMSIALIVKNKI 61
Query: 347 GFINGQIVAPDSNSPDYDNWKKVDYMVTNWI-LNSLGKDIVDAFIYVDSAYELWNDLAER 523
F++G +V P +N P ++ W+ N+L +L R
Sbjct: 62 AFVDGSLVQPITNDP---------HLRVAWLRANNL------------------EELKIR 94
Query: 524 FGESNGPLLYQIQKEISNLTQGNSSVAVYFTKLKKLWDEYSSLVSWPTCTCGTV------ 685
+ S+GP ++ ++K +S+++Q + S+ YF++ K LWDEY S P+C CG +
Sbjct: 95 YLRSDGPRVFSLEKSLSSISQNSKSITEYFSEFKALWDEYISYRPIPSCRCGNLNRCSCN 154
Query: 686 --KQIMEMESHSKLIKFLMGLNDAFDGARSQILLMEPLPSLNKAYSMLVKIERQRSATCA 859
K + + + ++KFL+GL+D++ RSQ+LL PLPS+++ +S+L++ E QRS T A
Sbjct: 155 ILKDLTDRQQSDYVMKFLVGLHDSYSAIRSQLLLQSPLPSMSRVFSLLLQEESQRSLTNA 214
Query: 860 FPEPVENSALLSKTTGHEKPYIPXXXXXXXXXXXXXXXXXXKTKEE-RAKLLCEHCGVNG 1036
+++ A++++ + TK++ ++ +C HCG +G
Sbjct: 215 VGISIDSQAMVAEQSSRT----------------VSTSNTQFTKQKGKSDAICSHCGYSG 258
Query: 1037 HEVSECFKLHGYPDWFKQLKEQRRLGLKPVANLAETDHKNTTKAITENSSDKGLQLGGIS 1216
H V +CF+L GYP +K + + + N T KN + T N+++ Q S
Sbjct: 259 HLVDKCFQLIGYPPRWKGPRGK-------IFNSTPTAAKNFQRLPTANNTNVLEQNSSNS 311
Query: 1217 TLI--QQEIAKYPCQQKSGGNIGNTEYGHTYAHFAEYAGTFTSDDTHFALTASENLDKGS 1390
+I Q++I S N NT + + ++ A +G ++ F T S + ++ +
Sbjct: 312 NMIFSQEQIQNLLTLANSLSN-SNTNF-NAXSNVASISG-----NSFFYNTISSSKNQFT 364
Query: 1391 WILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLV 1570
WILD A+ HM +P + T VH P+G T + +G V + + L + L V
Sbjct: 365 WILDIGATYHMIYSPLLFDSIVLPKTSSKVHLPNGKTVPIIFTGSVKFSPDITLHNALYV 424
Query: 1571 PSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDL---RTDGTIVVGRAVGKLYILATQ--- 1732
PSF NL+S S L + ++ F S C++QDL R G V + L L+ Q
Sbjct: 425 PSFNINLVSASRLTKDNSIGLFFLQSKCILQDLSKWRMIGXAEVQSGLXHLQQLSAQXNK 484
Query: 1733 ----SSLQPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQC 1900
SS+ S + S T +S D+WH RLGH + ++ + ++ + C
Sbjct: 485 EMXSSSIGLPSSSLVESCTVNS--DLWHFRLGHIPNAKIQ---LINSSDSSXKXIHNKVC 539
Query: 1901 VVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLY 2080
+C +AKQ +LPFP S S + F LVH +IWGP+S + + LT VDD +R WL+
Sbjct: 540 XICPLAKQKKLPFPISNSQSNKAFQLVHXBIWGPFSIPSYSXYXFFLTXVDDFTRFTWLF 599
Query: 2081 LMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVF 2260
LM K++ +L NF+ V FNTN+++ SDNG EF + + HGI+HQ SCV
Sbjct: 600 LMKTKTETXAILTNFLAYVHTHFNTNIQTLXSDNGQEF---NMPTFYQEHGIIHQLSCVE 656
Query: 2261 TPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEV 2440
TP QNG VERKH+HLL++ R+LMFQSKLP +W +LT ++INR P+S LN ++PY++
Sbjct: 657 TPXQNGRVERKHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQTPYQL 716
Query: 2441 LYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQIL 2620
L+ PNY+ K FGCL +++ ++ KF PR KCIFLGY P KG+K+ +L T +
Sbjct: 717 LFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTTXKXF 776
Query: 2621 VSRDVDFHEHSFPFHNLTAISPLT--PLPQVPITSSDLLDTPLHVTTPAVSETE----FA 2782
VSR+V FHE +FP T P PQ+ + S + + +T+ + + T+
Sbjct: 777 VSRNVJFHESTFPSIPDTIHKPFVFXDFPQIYESKSCKPNNSVSITSGSTNSTDPTSXIE 836
Query: 2783 XXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTP 2962
R S R P +L +Y N + + +P + +
Sbjct: 837 SSIPENTIHANNDANSLRRSERTKHLPKYLQNYYCGNM-----TKIDLATQAPSSCSSSG 891
Query: 2963 HPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETW 3142
P + F + S + +F++ +S+T EP +Y QA P W AM E+ ALE N+TW
Sbjct: 892 KPYYIFSFLSDSKLSSKHKAFISIISSTFEPKTYKQAVSIPHWKTAMTDEIKALEHNKTW 951
Query: 3143 DMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVT 3322
D+ LPP K IGCKWV++VK DGSV+RYKARLVAKGY Q G+D++D +SPVAKM T
Sbjct: 952 DLAILPPNKTTIGCKWVYQVKFKADGSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTT 1011
Query: 3323 VRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLK 3502
VR+L+AIA K W LHQLD+NNAFLH L+E YM P G++ +VC LKKSLYGL+
Sbjct: 1012 VRVLLAIAATKQWYLHQLDVNNAFLHEDLNEDVYMQLPPGFSTPNDPRVCKLKKSLYGLR 1071
Query: 3503 QASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQAL 3682
QASRQW ++L L +FG +Q+ D LFI + F+ALLIYV DV++ ++ +I +
Sbjct: 1072 QASRQWYSKLSSSLLKFGFSQAKTDSSLFIXQTSTSFIALLIYVXDVIIASNDLKEIDVV 1131
Query: 3683 KSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQ 3862
K +L FTIKDL D G K V P+
Sbjct: 1132 KKFLHESFTIKDL-------------------------------DSGFSGSKXVGFPMES 1160
Query: 3863 GLKLAGQSGRP-LDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALH 4039
LKL P L +P YR LIG LLYL +TRP++ Y+VQ LSQF+++P++ H A
Sbjct: 1161 SLKLTANDSSPLLSDPASYRKLIGILLYLTITRPBLAYAVQALSQFMSNPHSTHLQVAER 1220
Query: 4040 LVRYLKGCP 4066
++RY+K P
Sbjct: 1221 VLRYIKXTP 1229
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 763 bits (1969), Expect(2) = 0.0
Identities = 480/1341 (35%), Positives = 684/1341 (51%), Gaps = 35/1341 (2%)
Frame = +2
Query: 224 PFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDSNSPDYDN 403
P+ L +SDHPGL++VS L G NY W AM ++L AK KL F++G + PD + +
Sbjct: 67 PYFLHSSDHPGLNIVSHILDGTNYNNWSIAMRMSLDAKNKLSFVDGSLPRPDVSDRMFKI 126
Query: 404 WKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEISNLT 583
W + + MV W+LN + E+WNDL RF SN P YQ+++ I L
Sbjct: 127 WSRCNSMVKTWLLNVVT--------------EMWNDLFSRFRVSNLPRKYQLEQSIHTLK 172
Query: 584 QGNSSVAVYFTKLKKLWDEYSS--LVSWPTCTCGTVKQIMEMESHSKLIKFLMGLNDAFD 757
QGN ++ Y+TK K LW++ ++ +++ C C VK+++E S++I+FLMGLND F
Sbjct: 173 QGNLDLSTYYTKKKTLWEQLANTRVLTVRKCNCEHVKELLEEAETSRIIQFLMGLNDNFA 232
Query: 758 GARSQILLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVENSALLSKTTGHEKPYIPXXX 937
R QIL M+P P L + Y+ML + E QR V N L + T + P
Sbjct: 233 HIRGQILNMKPRPGLTEIYNMLDQDESQRL--------VGNPTLSNPTAAFQVQASPIID 284
Query: 938 XXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHGYPDWFKQLKEQR---- 1105
+ K C +C GH V +C+K HGYP K K Q
Sbjct: 285 SQVNM-----------AQGSYKKPKCSYCNKLGHLVDKCYKKHGYPPGSKWTKGQTIGST 333
Query: 1106 RLGLKPVANLAETDHKNTTKAITENSSDKGLQLGGISTLIQQEIAKYPCQQKSGGNIGNT 1285
L + + ET ++ T ++ + +ST + A P S +I +
Sbjct: 334 NLASTQLQPVNETPNEKTDSYEEFSTDQIQTMISYLSTKLHIASAS-PMPTTSSASISAS 392
Query: 1286 EYGHTYAHFAEYAGTFTS-------DDTHFALTASENLDKGSWILDTSASRHMCNNPSFM 1444
+ ++ +GTF S D +++ + W++D+ A+ H+ +N
Sbjct: 393 P---SVPMISQISGTFLSLFSNAYYDMLISSVSQEPAVSPRGWVIDSGATHHVTHNRDLY 449
Query: 1445 TDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLVPSFKYNLLSISYLIQKCN 1624
+ + V P+ T + G + L+D++ L +VL +P FK+NL+S
Sbjct: 450 LNFRSLENTF-VRLPNDCTVKIAGIGFIQLSDAISLHNVLYIPEFKFNLIS--------- 499
Query: 1625 LKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQS-----SLQPTS--CPSLT---SF 1774
+L + I G VG LY+L SL+ T+ CP + S
Sbjct: 500 -------------ELTKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPEFSVCSSV 546
Query: 1775 TTDSFLDMWHKRLGHASFSLLEHLPFLKPL----CNTGAKTAIQQCVVCHMAKQHRLPFP 1942
DS WHKRLGH ++S ++ L + L N C VCH++KQ L F
Sbjct: 547 VVDSVT--WHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQKHLSFQ 604
Query: 1943 TSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMHHKSQVPKLLEN 2122
+ + FDLVHID WGP+S + W+YL+ +KS V +
Sbjct: 605 SRQNMCSAAFDLVHIDTWGPFSVPT--------------NDATWIYLLKNKSDVLHVFPA 650
Query: 2123 FILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQQNGIVERKHRH 2302
FI MV Q+ T +KS RSDN E DLF +HGI+ SC TP+QN +VERKH+H
Sbjct: 651 FINMVHTQYQTKLKSVRSDNAHEL---KFTDLFAAHGIVAYHSCPETPEQNSVVERKHQH 707
Query: 2303 LLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPF 2482
+L++ R L+FQS +P +FW +LTA ++INRLPT LN KSPYE L + P Y LK F
Sbjct: 708 ILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAYESLKTF 767
Query: 2483 GCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPF 2662
GCL YS+ + + KF PR C+FLGY G KG+KL +++T + +SR V FHE FPF
Sbjct: 768 GCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIFHEDIFPF 827
Query: 2663 HNLTA---ISPLTPLPQVPITSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXX 2833
+ T I PL Q P + DL PL T ++ +T
Sbjct: 828 ISSTIKDDIKDFFPLLQFPARTDDL---PLEQT--SIIDTH----PHQDVSSSKALVPFD 878
Query: 2834 RASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHST 3013
S R KPP L D+ H + T P FH
Sbjct: 879 PLSKRQKKPPKHLQDF------------------------------HCYNNTTEP-FH-- 905
Query: 3014 YVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWV 3193
+F+ N++ P Y +A W +AM +E+ A+ TW +V LPP K IGCKWV
Sbjct: 906 --AFINNITNAVIPQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWV 963
Query: 3194 FKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQ 3373
F +K N DGS++RYKARLVAKGY Q G+DY + FSPVAK+ +VR+++ +A WS+HQ
Sbjct: 964 FTIKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQ 1023
Query: 3374 LDINNAFLHGHLDESFYMLPPDGYTK--GK---PGQVCFLKKSLYGLKQASRQWNTELCD 3538
LDI+NAFL+G LDE YM P GY G+ P +C L KS+YGLKQASRQW +L +
Sbjct: 1024 LDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLKLSN 1083
Query: 3539 KLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSYLDTLFTIKD 3718
L G +S D LFI++ + +L+YVDD+++ ++D + + L + F ++D
Sbjct: 1084 TLKGMGFQKSNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRD 1143
Query: 3719 LGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLKLAGQSGRPL 3898
LG A+YFLG+EIAR G + QRKYIL++LS G L KP PL +KL + G PL
Sbjct: 1144 LGAAKYFLGIEIARSEKGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPL 1203
Query: 3899 DEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRYLKGCPSLGL 4078
+ YR L+G+L+YL +TRPDI Y+V L QF ++P + H A ++RYLKG GL
Sbjct: 1204 TDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGL 1263
Query: 4079 FYASSSSLDLTAYCDADWGSC 4141
FY++ DL Y D+D+GSC
Sbjct: 1264 FYSADDKFDLRGYTDSDFGSC 1284
Score = 136 bits (342), Expect(2) = 0.0
Identities = 68/152 (44%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Frame = +1
Query: 4132 GFMPDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHD 4311
G D+R+ + YC+ +G L+SWK KKQ TVS S+AEAE+RA+S E++WLS LF D
Sbjct: 1282 GSCTDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDD 1341
Query: 4312 FSLPLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQ 4491
F +P P L+CDN AALHIV N VFHERTK +++DC+ R + F+ + + Q
Sbjct: 1342 FKVPFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDCYKTREAVESGFLKTMFVETGEQ 1401
Query: 4492 LADILTKNLGSSQHSNISSKLGMLDLHS-LPS 4584
+AD LTK + +Q + K+G+ ++ + LPS
Sbjct: 1402 VADPLTKAIHPAQFHKLIGKMGVCNIFAPLPS 1433
>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1013
Score = 720 bits (1858), Expect(2) = 0.0
Identities = 406/888 (45%), Positives = 528/888 (59%), Gaps = 20/888 (2%)
Frame = +2
Query: 1544 LILTDVLLVPSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYIL 1723
LIL DVL VPSF NL+S+S LI + HCLI T I + LY++
Sbjct: 1 LILHDVLFVPSFCVNLISVSQLINSHQCHLELHIDHCLILQNSTKKMIGTAKYQHGLYVI 60
Query: 1724 ----ATQSSL-QPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTA 1888
AT+S L QP +++ ++DS L WH RLGH S S + P+ +
Sbjct: 61 IRDSATRSQLTQPFVGNTISKDSSDSVL--WHHRLGHLSNSTHRIIASQFPIVSYQHHDV 118
Query: 1889 IQQCVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRG 2068
C +CH AKQ RLP S + + ++ +L+H DIWGPYS V Y LT+VDD SR
Sbjct: 119 --PCDICHFAKQKRLPHFISNTKSASVIELLHADIWGPYSIPSVFGHKYFLTLVDDFSRF 176
Query: 2069 VWLYLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQK 2248
W+ +M KS+ + L NFI ++ QF T +K R+DNG+EF+ H DLF S GI+HQ
Sbjct: 177 TWIVMMKSKSETRQHLTNFISYIETQFQTKLKCLRTDNGSEFLMH---DLFLSKGIIHQG 233
Query: 2249 SCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKS 2428
SCV TPQQNG+VERKH+H+L+ R L FQ+ LP FW F++ A ++INR+P+ L+ K+
Sbjct: 234 SCVETPQQNGVVERKHQHILNTARALYFQASLPKNFWNFAIQHAVHLINRIPSPLLDNKT 293
Query: 2429 PYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDT 2608
PY+ L+ P L+ FGCL Y++ Q H+ KF PR K + LGY G KG+ LY+L +
Sbjct: 294 PYQALHQRPPILVHLRSFGCLAYASTLQAHRTKFQPRAKKSVLLGYKEGVKGYLLYDLHS 353
Query: 2609 KQILVSRDVDFHEHSFPFH-----NLTAISPLTPLPQVPITSSDLLDTPLHVTTPAVSET 2773
+ +SR+V FHE +FPFH +LT SP Q PI+S LD HV S T
Sbjct: 354 HEFFMSRNVFFHEFTFPFHTPSQTSLTQPSPTPITIQTPISSPYDLDN--HVPPSPTSST 411
Query: 2774 EFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTS-----NAVAQFSSPAAVKPDS 2938
R S+R+ +PP +L DY S + FS
Sbjct: 412 SIPPEQPHQPLSPAPAPS--RHSTRMRQPPSYLKDYHCSLLAPTGRINSFSG-------- 461
Query: 2939 PRPTTGTPHPIHSFPYTISPLFHS-TYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKEL 3115
TPH I S T++ F S +Y F +VST EPH+Y QA K W+ AM EL
Sbjct: 462 ----ISTPHSISS---TLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYDCWIMAMKTEL 514
Query: 3116 DALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDC 3295
AL++N+TW +VDLP GK PIGCKWV+K+K DGS++RYKARLVAKGY Q G+DY D
Sbjct: 515 AALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYSQTEGLDYLDT 574
Query: 3296 FSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYT----KGKPG 3463
+SPVAK+ TVR+L+A+ IK W L QLD+NNAFLHG L E YM P G +
Sbjct: 575 YSPVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGLSVPSSSNTAP 634
Query: 3464 QVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDV 3643
+VC L KS+YGLKQASRQW ++L L G + S D LFI+ SHF ALL+YVDD+
Sbjct: 635 KVCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSHFTALLVYVDDI 694
Query: 3644 LVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLG 3823
++ G++ +I +K+ L F IKDLG RYFLG+EIAR + G LNQRKY L+IL D+G
Sbjct: 695 ILAGNDKPEIDFIKAQLHKCFKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEILEDVG 754
Query: 3824 MLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFIN 4003
L KP TP LKL G P ++ YR LIGRLLYL TRPDI+Y VQQLSQF++
Sbjct: 755 FLAAKPSSTPFNPSLKLHSDHGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQLSQFVS 814
Query: 4004 SPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSCPI 4147
P H+ AA ++RYLKG GLFY+SS+SL L+A+ D+DW SC I
Sbjct: 815 KPLDIHYQAATRILRYLKGSHGRGLFYSSSASLKLSAFADSDWASCSI 862
Score = 164 bits (416), Expect(2) = 0.0
Identities = 73/143 (51%), Positives = 104/143 (72%)
Frame = +1
Query: 4147 TRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLPL 4326
+RKSITG+C+ LG LISW+ KKQ+T+S+SS+EAEYRAL++ CEL WL YLF+D L
Sbjct: 863 SRKSITGFCVFLGSSLISWRSKKQSTISRSSSEAEYRALASLTCELQWLHYLFNDLKTSL 922
Query: 4327 QLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADIL 4506
P +FCDN++A+++ NP FHERTKH++IDCH++R K + + + S+ QLAD
Sbjct: 923 NFPTSVFCDNKSAIYLAHNPTFHERTKHIEIDCHVIREKIQSRLLHLLPVPSSSQLADAF 982
Query: 4507 TKNLGSSQHSNISSKLGMLDLHS 4575
TK L ++ ++ SKLG+ D+HS
Sbjct: 983 TKPLHATSFNSFVSKLGLYDVHS 1005
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 733 bits (1893), Expect(2) = 0.0
Identities = 467/1351 (34%), Positives = 684/1351 (50%), Gaps = 43/1351 (3%)
Frame = +2
Query: 221 DPFPLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPDSNSPDYD 400
+P L +SDHPGLS+V+ L G+NY +W AM I+L AK KLGF++G ++ P + +
Sbjct: 56 NPLLLHSSDHPGLSIVAHILDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTFR 115
Query: 401 NWKKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGESNGPLLYQIQKEISNL 580
W + + MV N P YQ+++ + L
Sbjct: 116 IWSRCNSMVNNL-----------------------------------PRRYQLEQAVMTL 140
Query: 581 TQGNSSVAVYFTKLKKLWDEYSSLVSWPT--CTCGTVKQIMEMESHSKLIKFLMGLNDAF 754
QG ++ YFTK K LW++ ++ S C C VK+++E S++I+FLMGL+D F
Sbjct: 141 QQGKLDLSTYFTKKKTLWEQLANTKSRSVKKCDCDQVKELLEEAETSRVIQFLMGLSDDF 200
Query: 755 DGARSQILLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVENSALLSKTTGHEKPYIPXX 934
+ RSQI M+P P LN+ Y+ML + E QR A S +T G
Sbjct: 201 NTIRSQIFNMKPRPGLNEIYNMLDQDESQRLVGFAAKSVPSPSPAAFQTQG--------- 251
Query: 935 XXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVSECFKLHGYPDWFKQLKEQRRLG 1114
+ K C HC GH V +C+K+HGYP + KE +G
Sbjct: 252 -------VLNDQNTILLAQGNFKKPKCTHCNRIGHTVDKCYKVHGYPPGHPRAKENTYVG 304
Query: 1115 LKPVANLAETDHKNTTKAIT------ENSSDKGLQ--LGGISTLIQQEIAKYPCQQKSGG 1270
NLA TD T T E S+ +Q + +ST +Q C K+
Sbjct: 305 S---TNLASTDQIETQAPPTMSATGHETMSNDHIQQLISYLSTKLQSPSIT-SCFDKAIA 360
Query: 1271 NIGN-------------TEYGHTYAHFAEYAGTFTS--DDTHFALTASE-----NLDKGS 1390
+ N + ++ GTF S D T++ + S L +
Sbjct: 361 SSSNPVPSISQITDKAIASSSNPVPSISQITGTFFSLYDSTYYEMLTSSIPIETELSLRA 420
Query: 1391 WILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILTDVLLV 1570
W++D+ AS H+ + + ++ V P+G T + +G + LTD+L L +VL +
Sbjct: 421 WVIDSGASHHVTHERNLYHTYKALDRTF-VRLPNGHTVKIEGTGFIQLTDALSLHNVLFI 479
Query: 1571 PSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQSSLQPT 1750
P FK+NLLS+S L + K F C+IQ L + + G VG LYIL SL
Sbjct: 480 PEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNLDKSLVDV 539
Query: 1751 S-------CPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQCVVC 1909
S C S+ + + +MWHKRLGH SF+ ++ L + L C VC
Sbjct: 540 SSFPGKSVCSSVKNES-----EMWHKRLGHPSFAKIDTLSDVLMLPKQKINKDSSHCHVC 594
Query: 1910 HMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYLMH 2089
H++KQ LPF + F+LVHID WGP+S V + Y LTIVDD SR W+YL+
Sbjct: 595 HLSKQKHLPFKSVNHIREKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLLK 654
Query: 2090 HKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFTPQ 2269
KS V + +F+ MV+ Q++T V S RSDN E +LF GI C TP+
Sbjct: 655 QKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHEL---KFNELFAKEGIKADHPCPETPE 711
Query: 2270 QNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVLYS 2449
QN +VERKH+HLL++ R LMFQS +P ++W +LTA ++INRL + +N ++PYE L
Sbjct: 712 QNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLTK 771
Query: 2450 HTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQILVSR 2629
P+YS LK FGCL Y + + + KF PR CIFLGY G KG+KL +++T + +SR
Sbjct: 772 GKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISR 831
Query: 2630 DVDFHEHSFPF--HNLT-AISPLTPLPQVPITSSDLLDTPLHVTTPAVSETEFAXXXXXX 2800
V F+E FPF N+T A P +P ++D H+ P V + A
Sbjct: 832 HVIFYEDIFPFASSNITDAAKDFFPHIYLPAPNNDE-----HL--PLVQSSSDAPHNHDE 884
Query: 2801 XXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIH-- 2974
+ S+R K P L D+ N ++P T +P+P+
Sbjct: 885 SSSMIFVPSEPK-STRQRKLPSHLQDFHCYN-------------NTPTTTKTSPYPLTNY 930
Query: 2975 -SFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMV 3151
S+ Y P + +F+ ++ TK P Y +A D +W +AM KE+ A TW +
Sbjct: 931 ISYSYLSEP-----FGAFINIITATKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSIC 985
Query: 3152 DLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRL 3331
DLP GK +GCKW+ +K DGS++R+KARLVAKGY Q G+D+++ FSPVAKMVTV++
Sbjct: 986 DLPAGKVAVGCKWIITIKFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKV 1045
Query: 3332 LVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQAS 3511
L+++A W LHQLDI+NA L+G L+E YM P GY++ + GQ +G
Sbjct: 1046 LLSLAPKMKWYLHQLDISNALLNGDLEEEIYMKLPPGYSEIQ-GQEVSPNAKCHG----- 1099
Query: 3512 RQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSNDADIQALKSY 3691
D LF++ FL +L+YVDD+L+ + +A L S
Sbjct: 1100 ---------------------DHTLFVKAQDGFFLVVLVYVDDILIASTTEAASAELTSQ 1138
Query: 3692 LDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKPVVTPLPQGLK 3871
L + F ++DLG ++FLG+EIAR + G L QRKY+LD+L+ CKP P+ K
Sbjct: 1139 LSSFFQLRDLGEPKFFLGIEIARNADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQK 1198
Query: 3872 LAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDHWDAALHLVRY 4051
L+ +G L++ +YR ++G+L YL LTRPDI ++V +L+Q+ ++P H A ++RY
Sbjct: 1199 LSKDTGTLLEDGKQYRRILGKLQYLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKILRY 1258
Query: 4052 LKGCPSLGLFYASSSSLDLTAYCDADWGSCP 4144
LKG GLFY + ++ DL + D+DW +CP
Sbjct: 1259 LKGTIGQGLFYGADTNFDLRGFSDSDWQTCP 1289
Score = 142 bits (358), Expect(2) = 0.0
Identities = 70/144 (48%), Positives = 93/144 (64%)
Frame = +1
Query: 4141 PDTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSL 4320
PDTR+ +TG+ I +G L+SW+ KKQ VS SSAEAEYRA+S EL+WL Y+ F +
Sbjct: 1289 PDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGYILTAFKI 1348
Query: 4321 PLQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLAD 4500
P P L+CDN+AALHI N VFHERTKH++ DCH VR + + + + QLAD
Sbjct: 1349 PFTHPAYLYCDNEAALHIANNSVFHERTKHIENDCHKVRECIEAGILKTIFVRTDNQLAD 1408
Query: 4501 ILTKNLGSSQHSNISSKLGMLDLH 4572
LTK L +SKLG+L+++
Sbjct: 1409 TLTKPLYPKPFRENNSKLGLLNIY 1432
>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
Length = 1493
Score = 739 bits (1907), Expect(2) = 0.0
Identities = 459/1366 (33%), Positives = 708/1366 (51%), Gaps = 65/1366 (4%)
Frame = +2
Query: 230 PLTNSDHPGLSLVSSPLTGNNYLTWRRAMLIALGAKTKLGFINGQIVAPD-SNSPDYDNW 406
P+ D+ L L L G NY W +A+ + + K KLGF+ G+ P ++ W
Sbjct: 21 PVGAFDNSPLHLTIEKLNGKNYREWAQAIKLVIDGKGKLGFLTGETRRPPPTDVAASQKW 80
Query: 407 KKVDYMVTNWILNSLGKDIVDAFIYVDSAYELWNDLAERFGES-NGPLLYQIQKEISNLT 583
+ + +T+ + NS+ I ++++ +A ++W+ + E + ++ N +++I+ + +
Sbjct: 81 RSENSFITSCLXNSMKPSIGKTYMFLPTAKDVWDAIXETYSDAENASQIFEIKTRLWQMK 140
Query: 584 QGNSSVAVYFTKLKKLWDEY--SSLVSWPTCTCGTVKQIMEMESHSKLIKFLMGLNDAFD 757
QG+ V Y+T++ LW E S W CT +V+ +ME+ ++ +FL GLN D
Sbjct: 141 QGDREVTEYYTEMLGLWQELDLSCEEEWE-CTGDSVRFKKKMENE-RVFEFLXGLNRELD 198
Query: 758 GARSQILLMEPLPSLNKAYSMLVKIERQRSATCAFPEPVENSALLS------------KT 901
RS++L LPS+ + +S + + E R E SALL+
Sbjct: 199 DVRSRVLSRRXLPSIREVFSEVRREESXRRVMLDHSVGPEGSALLTYGPHGPHGPYAIAG 258
Query: 902 TGHEK-----------PYIPXXXXXXXXXXXXXXXXXXKTKEERAKLLCEHCGVNGHEVS 1048
GH P+ P + + + CEHC GH
Sbjct: 259 RGHSVGLEGSALLTYGPHGPHGPYAIAGRGPSVAXSSGPSPRQSKRTYCEHCKKLGHTKD 318
Query: 1049 ECFKLHGYP-DWFKQLKEQRRLGLKPVANLAETDHKNTTKAITENSSDKGLQLGGISTLI 1225
C+ LHG P DW KP + + ++ +A TE +DK
Sbjct: 319 TCWALHGKPADW------------KP----RQPNKAHSHQASTEAQADK----------T 352
Query: 1226 QQEIAKYPCQQKSGGNIGNTEYGHTYAHFAEYAGTFTSDDTHFA---------LTASENL 1378
E+ CQ S + + Y F+ + + S T + LTA +
Sbjct: 353 PTEV----CQSTSSVGFNSNQIAKLYELFSNFQASGQSSTTLSSGSLAKKGTFLTALSTM 408
Query: 1379 DKG-SWILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDSLILT 1555
+ WI+D+ AS HM + + +P ++ V DG+ V G + +++S+ L
Sbjct: 409 SQTIPWIVDSGASDHMTDAHHLFSTYSPCAGNLKVKIADGTLSPVAGKGSIRISESITLN 468
Query: 1556 DVLLVPSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYILATQS 1735
VL VP+ NLLSIS L +K N F SHC+ QDL + TI + LY
Sbjct: 469 PVLHVPNLSCNLLSISQLTKKSNCSAKFLSSHCVFQDLSSGKTIGSAKEREGLYYFDETD 528
Query: 1736 SL---QPTSCPSLTSFTTDSFLDMWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQ-QCV 1903
L PT C S TS++ DS L +WHKR+GH SF L+HL LC+ KT + QC
Sbjct: 529 VLGQSSPTVCNS-TSYSKDSELLLWHKRMGHPSFQYLKHL--FPSLCSN--KTILDFQCE 583
Query: 1904 VCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWLYL 2083
VC +AK HR FP S F L+H D+WGP + + + +T +DD +R W+YL
Sbjct: 584 VCELAKHHRTSFPKSKYKPSIPFTLIHSDLWGPSRTPNRTHKKWFITFIDDHTRLCWVYL 643
Query: 2084 MHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCVFT 2263
+ K++V + NF M++ QF+T ++ R+DNG E+ +HS +GI+HQ SCV T
Sbjct: 644 LTDKTEVRSVFMNFHYMIQTQFHTKIQILRTDNGTEYFNHSLSTYLQENGIIHQSSCVDT 703
Query: 2264 PQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYEVL 2443
PQQNG+ ERK+RH+L++ R L+F S +P++FW S+LTA Y+INR+P+ L+ +P +
Sbjct: 704 PQQNGVAERKNRHILEVARALLFSSHMPTQFWGDSILTATYLINRMPSRVLSFVTPLQKF 763
Query: 2444 YSHTPNYSL-----LKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDT 2608
+ P+ L L+ FG V+ P ++KF PR K +FLGY QKG+K Y+ +
Sbjct: 764 HEFFPHSRLDAHLPLRVFGSTVFVHIHGPKRNKFDPRALKXVFLGYSSTQKGYKCYDPIS 823
Query: 2609 KQILVSRDVDFHEHSFPFHNLTAISPLTPLPQVPITSSDLLDTPLHVTTPAVSETEFAXX 2788
+++ VS DV F H+ P+++L S P + +SD LD + +TP
Sbjct: 824 QKLYVSLDVTFFXHT-PYYSLQGESMSETRPSL---TSDYLDVAMFESTPCFISNPSHNT 879
Query: 2789 XXXXXXXXXXXXXXXRASSRIS-KPPGWLADYVTSNAVAQFSSPAAVKP-----DSPRPT 2950
R + S +P + + S A+ + S P +S + T
Sbjct: 880 EGHLNLGGDMELQTNRETLVYSRRPKSKFNETLISEALQESESVIVPTPREYDFNSDQVT 939
Query: 2951 TGTPHPIHSFP--YTISPLFHSTYV--------SFLANVSTTKEPHSYFQACKDPLWVEA 3100
P I P T+ P+ + +F N+ + P + +A + P W EA
Sbjct: 940 DDLPIAIRKQPRSCTLHPISNXVSYNSLSAKCRAFTTNLDRIQLPKNIQEAFEIPEWKEA 999
Query: 3101 MHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGV 3280
+ +E+ ALE NETW++++LP GK P+GCKW+F VK DG+V+RYKARLVAKG+ Q +G+
Sbjct: 1000 VMEEIRALEKNETWEVMNLPRGKKPVGCKWIFTVKYKADGTVERYKARLVAKGFTQTYGI 1059
Query: 3281 DYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTK-GK 3457
DY + F+PVAK+ T+R+L+++A +W LHQ DI NAFL+G L+E +M+ P G+ K +
Sbjct: 1060 DYTETFAPVAKLNTIRVLLSLAANLDWPLHQFDIKNAFLNGELEEEVFMMLPPGFCKEEE 1119
Query: 3458 PGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRH-DGSHFLALLIYV 3634
+VC LKKSLYGLKQ+ R W + G Q D +F + + L++YV
Sbjct: 1120 ETRVCKLKKSLYGLKQSPRAWFDRFAKVIKNQGYQQGQSDHTMFFKQSNDGRMTILIVYV 1179
Query: 3635 DDVLVTGSNDADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILS 3814
DD+++TG + +++ LK L T F +KDLG RYFLGME+AR G ++QRKY+LD+L+
Sbjct: 1180 DDIILTGDDTGEVERLKKVLATEFEVKDLGQMRYFLGMEVARSRKGISISQRKYVLDLLT 1239
Query: 3815 DLGMLQCKPVVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQ 3994
+ GML CKP TP+ ++ G+P+D +KY+ L+GRL+YL+ TRPDI ++V +SQ
Sbjct: 1240 ETGMLGCKPSDTPIKARNRME-SDGKPVDR-EKYQRLVGRLIYLSHTRPDIAFAVSVVSQ 1297
Query: 3995 FINSPYTDHWDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADW 4132
+++SP H +A ++RYLKG P GLF+ S S + Y DADW
Sbjct: 1298 YMHSPKESHLEAVYKILRYLKGSPGRGLFFKKSDSKKVEIYTDADW 1343
Score = 135 bits (340), Expect(2) = 0.0
Identities = 62/143 (43%), Positives = 95/143 (66%)
Frame = +1
Query: 4144 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 4323
D R+S TGYC + G L++W+ KKQ+ V++SSAEAE+RA++ +CE LWL L + +
Sbjct: 1348 DDRRSTTGYCTYVWGNLVTWRSKKQSVVARSSAEAEFRAVAQGMCEGLWLKKLLEELCIT 1407
Query: 4324 LQLPVPLFCDNQAALHIVANPVFHERTKHLDIDCHIVRNKYKDSFILPKKISSTLQLADI 4503
++LP+ L+CDN+AA+ I NPV H+RTKH+++D H ++ K + I I + QLADI
Sbjct: 1408 IELPIKLYCDNKAAISISHNPVQHDRTKHIEVDRHFIKEKIEKGIICMTYIPTREQLADI 1467
Query: 4504 LTKNLGSSQHSNISSKLGMLDLH 4572
TK L S + KL M++++
Sbjct: 1468 FTKGLQKSSFEDFIGKLDMINIY 1490
>gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1097
Score = 743 bits (1918), Expect(2) = 0.0
Identities = 431/1060 (40%), Positives = 593/1060 (55%), Gaps = 17/1060 (1%)
Frame = +2
Query: 1013 CEHCGVNGHEVSECFKLHGYPDWFKQLKEQRRLGLKPVANLAETDHKNTTKAITENSSDK 1192
C +C GH + C+K HGYP FK G E D N + E++ D
Sbjct: 1 CTYCNKLGHTIETCYKKHGYPPHFKG-------GSAHNCYNEECDEGNPV--LNESAGDI 51
Query: 1193 GLQLGGISTLIQQEIAKYPCQQKSG--GNIGNTEYGHTYAHFAEYAGTFTSD-DTHFALT 1363
G ++L + +Q G + + HT H Y TSD + T
Sbjct: 52 SKGEKGENSL------GFTAEQHKALLGMLTQQQSHHTANHITTYELPSTSDPQSGIVYT 105
Query: 1364 ASENLDKGSWILDTSASRHMCNNPSFMTDLNPVNTHITVHQPDGSTKIVTHSGKVHLTDS 1543
S N++ WILD+ A+ H+C + L + + +H PDG G + ++
Sbjct: 106 VSNNMNNNIWILDSGATDHICRSIKLFQCLRRIKP-VKIHLPDGKCVTTNLCGSIFFSED 164
Query: 1544 LILTDVLLVPSFKYNLLSISYLIQKCNLKCIFYPSHCLIQDLRTDGTIVVGRAVGKLYIL 1723
L DVL +P F +NL+S+S LI++ + F C IQD ++ I + LY+L
Sbjct: 165 FFLADVLYIPEFNFNLVSVSRLIRQLGCRLTFSGDLCDIQDSQSMKMIGAAKHNMGLYVL 224
Query: 1724 ATQSSLQPTSCPSLTSFTTDSFLD--MWHKRLGHASFSLLEHLPFLKPLCNTGAKTAIQQ 1897
+P C L S D +WH RLGH + L+ + P + K
Sbjct: 225 ----DWKPKVCLYLHSINNFHSYDNDLWHIRLGHLAHEKLQAMKSNFPFID--CKKNKDP 278
Query: 1898 CVVCHMAKQHRLPFPTSASHAVNLFDLVHIDIWGPYSSSCVANTPYMLTIVDDCSRGVWL 2077
C VC++AKQ +LPF S + A +FDL+H+DIWGP + + + + LTIVDD SR W+
Sbjct: 279 CNVCYLAKQRQLPFSHSVTKADEIFDLLHVDIWGPTTPASIFGHRFFLTIVDDKSRHTWV 338
Query: 2078 YLMHHKSQVPKLLENFILMVKNQFNTNVKSFRSDNGAEFISHSCQDLFHSHGILHQKSCV 2257
Y M HKS+V L +FI +++NQF VK RSDNG EF+ ++ +H GILHQ SCV
Sbjct: 339 YFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFL---LKNFYHEKGILHQTSCV 395
Query: 2258 FTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKSPYE 2437
TPQQNGIVERKH+H++ + R L+ QS LP FW +++ A ++INR P+S L K PYE
Sbjct: 396 ETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINRQPSSFLENKIPYE 455
Query: 2438 VLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDTKQI 2617
++Y+ P+ + +K FGCL Y+ ++ KF PRG +C+FLG+ P KG LY+L++++
Sbjct: 456 IIYNALPDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGFKPQVKGSILYDLNSRET 515
Query: 2618 LVSRDVDFHEHSFPFH-----NLT-AISPLTPLPQVPITSSDLLDTPLHV-TTPAVSETE 2776
+SR V++ EH FPF +LT IS P +PI D TPL TTP S
Sbjct: 516 FLSRHVEYFEHIFPFLPTSPLDLTQTISLPRHQPPLPI---DTDPTPLSTNTTPTSSPVS 572
Query: 2777 FAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTG 2956
+ S+R K P +L DY + +SP +P
Sbjct: 573 VVPPPPFV-----------QKSTRPRKLPSYLHDY-HHTLLTTHNSPTISQP-------- 612
Query: 2957 TPHPIHS-FPYT-ISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALEL 3130
+ IH+ Y+ +SP + +F ++S+ KEP+SY +A +D W A+ EL ALE
Sbjct: 613 -LYSIHNHISYSNLSP----SQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEK 667
Query: 3131 NETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVA 3310
N TW + LPP K +GCKWVFK+K N DG+++R+KARLVAKGY Q G+DY D FSPV
Sbjct: 668 NNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTEGLDYLDTFSPVV 727
Query: 3311 KMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQ---VCFLK 3481
KM TVR L+A+AT KNW +HQLD+N FLHG L E YM PP G T P Q VC L
Sbjct: 728 KMTTVRTLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVS-PHQSNCVCKLV 786
Query: 3482 KSLYGLKQASRQWNTELCDKLTRFGLNQSPHDPCLFIRHDGSHFLALLIYVDDVLVTGSN 3661
KSLYGLKQASRQWN +L L G QS D LF + G+ F A+L+YVDD+++ G++
Sbjct: 787 KSLYGLKQASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGND 846
Query: 3662 DADIQALKSYLDTLFTIKDLGFARYFLGMEIARGSAGTFLNQRKYILDILSDLGMLQCKP 3841
+I +KS LD FTIKDLG +YFLGME+AR S G L QRKY LD++ D G+L KP
Sbjct: 847 PTEINYIKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIEDTGLLASKP 906
Query: 3842 VVTPLPQGLKLAGQSGRPLDEPDKYRSLIGRLLYLNLTRPDITYSVQQLSQFINSPYTDH 4021
+P+ +KL G PL +P +YR L+GRL+YL TR DI++SV LSQF++ P H
Sbjct: 907 CKSPMDHSVKLHKTVGTPLTDPTQYRRLLGRLIYLTNTRADISFSVNHLSQFMDQPTDVH 966
Query: 4022 WDAALHLVRYLKGCPSLGLFYASSSSLDLTAYCDADWGSC 4141
+ AAL +++Y+K P GLF+ SSS L L Y D+DW SC
Sbjct: 967 YQAALRILKYVKNAPGKGLFFPSSSDLTLKGYSDSDWASC 1006
Score = 131 bits (329), Expect(2) = 0.0
Identities = 61/90 (67%), Positives = 71/90 (78%)
Frame = +1
Query: 4144 DTRKSITGYCIQLGGCLISWKCKKQTTVSKSSAEAEYRALSTTVCELLWLSYLFHDFSLP 4323
DTR+S+TG+ LG LISWK KKQ TVSKSSAEAEYRAL+ + CE W+SYL HDF L
Sbjct: 1008 DTRRSVTGFSFFLGPALISWKSKKQATVSKSSAEAEYRALAQSTCEAQWISYLLHDFGLH 1067
Query: 4324 LQLPVPLFCDNQAALHIVANPVFHERTKHL 4413
P+ LFCDNQ+ALHI +NPVFHERTKH+
Sbjct: 1068 NFHPIVLFCDNQSALHIASNPVFHERTKHI 1097