BLASTX nr result
ID: Rehmannia28_contig00018408
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00018408
(4743 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 583 e-179
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo... 585 e-179
gb|KYP42321.1| Copia protein [Cajanus cajan] 585 e-179
gb|KYP38774.1| Retrovirus-related Pol polyprotein from transposo... 556 e-177
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 555 e-176
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 568 e-176
gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposo... 545 e-175
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 570 e-173
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo... 566 e-173
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 568 e-173
gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposo... 547 e-172
gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo... 561 e-171
gb|AJY78065.1| putative polyprotein [Glycine max] 531 e-170
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula] 535 e-170
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo... 551 e-170
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo... 547 e-169
ref|XP_009338880.1| PREDICTED: uncharacterized protein LOC103931... 549 e-169
gb|KOM46937.1| hypothetical protein LR48_Vigan07g064100 [Vigna a... 536 e-168
ref|XP_010692573.1| PREDICTED: uncharacterized protein LOC104905... 539 e-168
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo... 554 e-167
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 583 bits (1503), Expect = e-179
Identities = 313/646 (48%), Positives = 417/646 (64%), Gaps = 6/646 (0%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCPIQ--TPNLSDTPLP----YLPVLEDSSSSNL 164
KGY LF+L T +L+SR+V+F ED FP + +P+ S +P+P Y+ SSS +
Sbjct: 666 KGYLLFNLHTHGLLVSRNVLFHEDHFPSFTKPHSPSFS-SPVPIHYNYVDYPTFPSSSIV 724
Query: 165 EFIXXXXXXXXXXXXXXXXXXXXXVSHRPAYLNDFITNHVTDTAPCFHVASSVTSATHSY 344
E P YL DF T T+ H ++ + HS+
Sbjct: 725 E--SSDPPTSDQHSSPPPLRRSTRPRRPPTYLQDF-HGAFTSTSTA-HSSTGIRHPLHSF 780
Query: 345 HHISPLFAPAYVSFLANVDSIQEPLSYSHARLDDNWVEAMSKELEALEFNGTWLLTELPP 524
L +P++ ++ ++ S+ EP +++ A D+W++AM +E+ ALE N TW+LT LPP
Sbjct: 781 LSYD-LLSPSFHHYVFSISSVTEPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPP 839
Query: 525 GKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIVV 704
K AIG +WVYKVK DG+IDRYKARLVAKGY Q+ G+D+FD+FSPVAKL TVR L+ +
Sbjct: 840 HKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSL 899
Query: 705 ATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPGQVCLLKKSLYGLKQASREWN 884
A ++W L QLD+NNAFLHG LNEEVYM+ P G + PGQVC L++SLYGLKQASR+W
Sbjct: 900 AAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASRQWY 959
Query: 885 TAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESDIAHLKHYLDGL 1064
LI +G+ S DH LFLK + G++ ++I HL L
Sbjct: 960 ARLSSFLIQHGYVPSPSDHSLFLKCSPATTTAILIYVDDIVLAGNDLTEIHHLTSLLHTT 1019
Query: 1065 FTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTKMMDCKVVSTPLPPGIKLIHG 1244
F IKDLG KYFLG+E+AR+ G +LCQRKYILD+L DT M+ K VSTP+ + L
Sbjct: 1020 FQIKDLGNLKYFLGLEVARNHTGIHLCQRKYILDLLSDTGMLASKPVSTPMDYSMHLSAS 1079
Query: 1245 AGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEAALHVLRYLKGC 1424
+GTPL++ +RRL+GRL+YL TRPDI +A QQLSQFV P T+H +A +LRYLKG
Sbjct: 1080 SGTPLTDTAAYRRLVGRLIYLTNTRPDITYAVQQLSQFVSNPTTAHRQALFRILRYLKGT 1139
Query: 1425 PSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFYGNCLISWKTKKQTTVSRSSA 1604
P G+F SV+++ L A+S++DW+ CPDT +S+TG+ V+ G+ LISWK+KKQ TVSRSS+
Sbjct: 1140 PGSGIFLSVNSSVQLRAFSDSDWAGCPDTRRSITGFAVYLGDSLISWKSKKQITVSRSSS 1199
Query: 1605 EAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPVFHERTKHLDID 1784
EAEY AL TT CELQWL Y+ +D + +P L+CDNQ+A+ I +NPVFHERTKH++ID
Sbjct: 1200 EAEYRALATTTCELQWLSYLLKDFHIDPISPSILYCDNQSALQIASNPVFHERTKHIEID 1259
Query: 1785 CHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRILSKFGL 1922
CHIVR+K G L L V+S QLADI TK L F+ SK G+
Sbjct: 1260 CHIVRDKVSTGLLKLLPVSSSQQLADILTKPLSPFVFRSHCSKLGM 1305
Score = 402 bits (1032), Expect = e-114
Identities = 246/742 (33%), Positives = 377/742 (50%), Gaps = 14/742 (1%)
Frame = +2
Query: 2555 MLISWILNSLSKDILDAFLYARNAKELWDDIAERFGGCNGPLLYQLKRDIANVTQGTLST 2734
M++SW+++S+S I + L+ A ++W D+ R+ + + L+ + +++ QG LS
Sbjct: 1 MVVSWLVHSVSPSIRQSILWMDQADDIWKDLKTRYSQGDLLRVSDLQLEASSLKQGDLSV 60
Query: 2735 TVYFTKLKRLWDELSFLDPLPPCTCETNKQ------LIDRDMKDKLIQFLMGLNDSHEHV 2896
T YFTKL+ LWDEL P P CTC + R ++D+ +QFL GLND + +V
Sbjct: 61 TEYFTKLRILWDELENFRPDPNCTCTIKCACSVLTIIAQRKLEDQAMQFLRGLNDQYNNV 120
Query: 2897 RSQILIMDPLPNINKAYSMLLTVEKQRTAQLEVSEL-IENSAMMSKVQGPIRDTPNRMGN 3073
+S +L+M+P I+K +S ++ E+Q Q ++ + ++ ++ ++ V P NR G+
Sbjct: 121 KSHVLLMEP--PISKIFSYVVQQERQLLGQNFIANVHLDRTSSINAVASPTCTHCNRTGH 178
Query: 3074 NSGPPHRNRGFHRMTKEE------KAKLICEHCKGPGHDVNTCFKLHGIPDWFKKLKDQR 3235
R GF T + + IC HC GH + C++ HG P
Sbjct: 179 TDAVCFRKHGFPSTTNRSNKGSSNRPRRICTHCGKTGHTIEVCYQKHGFPP--------- 229
Query: 3236 GRQGVANLVDSTGAQNNKLGASTEGNPHPNMSNMIQQEVAKYLAGRMMGGSNLPSESNLS 3415
G L D T + N+ + G +ES S
Sbjct: 230 ---GSKPLSDKTASVNHTVT-----------------------------GDCKVTESTQS 257
Query: 3416 FAHFADFAGKHAPIDVHFGLSMLGNLDNGSWILDTGASRHMCSNPTLLSHITPISPHATI 3595
+ + F + SWILD+GA+ H+ S+ + S +PI+P +
Sbjct: 258 L--------ESQDVRTSFPIVCSAISTPSSWILDSGATDHVSSSLSHFSSFSPINP-IDV 308
Query: 3596 CLPDGTTKSVTHSGHIRLSPHLHLHDVFVVPSFKYTLLSVPQLTQQANLKCIFFPTHCVF 3775
LP G THSG ++ + +L DV +P+F Y L+S+ +L + + IF C+
Sbjct: 309 KLPTGQHVLATHSGTVKFTNSFYLVDVLYIPAFTYNLISISKLVSSLSCQLIFDHHSCII 368
Query: 3776 QDLHSDKILGTGKLHGRLYILQQTPVLSTPVSLAFNSDSSFPTQVLCN-GSFELWHKKLG 3952
Q+ ++ K +GT ++ LY T ++ S +S C+ +LWH ++G
Sbjct: 369 QETNTMKKIGTVDVNEGLYSF-------TASNIHHPSTNSVIVHPKCSIQPIDLWHFRMG 421
Query: 3953 HASISLLNHIGFLKSLCTAETTKMLQGCDVCHQSKQHRLPFSTSSIQTSDVFELLHIDVW 4132
H S L FL + +T+ C+ CH +KQ +LPF S S F+LLH+D+W
Sbjct: 422 HLSHERLQSFPFL----SVDTSF---SCNTCHHAKQKKLPFPLSHSYASQPFDLLHMDIW 474
Query: 4133 GLYRAPNITNTPFLLNIVDDFSRATWTFLMSHKSHTPKLLAQFLAMVHNHFQKSVKFIRT 4312
G ++ + L IVDD +R TW FLM +KS T + + F+ V F K VK IRT
Sbjct: 475 GPCSVTSMHGHKYFLTIVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKHVKVIRT 534
Query: 4313 DNGTEFLSLECQTLFSAHGIIHQKTCTYTPQQNGVVECKHRHLLDIARALMFQSNAPSHL 4492
DNG EF + FS+ GIIHQ TC TPQQNG+VE KH+HLL++ R+L+FQ+N PS
Sbjct: 535 DNGLEFSMTQ---YFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIF 591
Query: 4493 WPYSILTATFLTNRLPVSVLHWKTPFEVLYSKTPNYSGLKPFGCLCYATNVFPHKDKFTT 4672
W ++++ ATFL N +P LH +PFE LY + S L FGCLCY++ + H+ K
Sbjct: 592 WCFALMHATFLINCIPTPFLHNISPFEKLYGHPCDISILCVFGCLCYSSTITSHRTKLDP 651
Query: 4673 RAHKCIFLGYLPNQKGYRLFDL 4738
RAH CIFLG+ P+ KGY LF+L
Sbjct: 652 RAHPCIFLGFKPHTKGYLLFNL 673
>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1394
Score = 585 bits (1507), Expect = e-179
Identities = 307/664 (46%), Positives = 412/664 (62%), Gaps = 24/664 (3%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCPIQTPNLSDTP-------------------LP 125
KGY LF+LTT+ L+SR+VIF E FP +P++S+ +
Sbjct: 725 KGYLLFNLTTKSFLLSRNVIFYESHFPYASNSPSVSNNHTTGTTASQQSFDSLIAFDIIS 784
Query: 126 YLP--VLEDSSSSNLEFIXXXXXXXXXXXXXXXXXXXXX---VSHRPAYLNDFITNHVTD 290
+P V D SSN++ +S RP +++++
Sbjct: 785 AIPNNVTSDIVSSNIDHNAVEPVLQFNDDSNDAVQIVDQPTRISTRPRKPPAYLSDYDCP 844
Query: 291 TAPCFHVASSVTSATHSYHHISPLFAPAYVSFLANVDSIQEPLSYSHARLDDNWVEAMSK 470
T + + HSY S + ++ +F ++ + EP S+ A D+W +AM
Sbjct: 845 TLSSANTSCCTPYPLHSYLSYSNC-SDSHTAFCMSLSATIEPTSFKEACKHDHWQQAMLA 903
Query: 471 ELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVDYF 650
E++ALE N TW L LPP K+ +G KWVYK K+N DG+I+R+KARLVAKG+ Q G+D+F
Sbjct: 904 EIQALERNKTWSLVRLPPKKRVVGCKWVYKTKLNADGSIERHKARLVAKGFTQTEGMDFF 963
Query: 651 DSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPGQV 830
++FSPV KL TVRFL+ VA H+W LHQLD++NAFLHG L+ EVYM+PP G + +P V
Sbjct: 964 ETFSPVVKLTTVRFLLSVAVSHNWFLHQLDVDNAFLHGDLDVEVYMKPPPGLILPEPHLV 1023
Query: 831 CLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXXXX 1010
C L KSLYGL+QASR+ N+ +LI+YGF QS DH LF++ +TSF
Sbjct: 1024 CKLHKSLYGLRQASRQGNSKLTSALISYGFSQSPADHSLFIRHSSTSFTALLVYVDDIVL 1083
Query: 1011 TGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTKMM 1190
TG + DI +K +L F IKDLG K FLG ++ARS+QG L QRKY LDIL +
Sbjct: 1084 TGDSIQDIVAVKKFLHHEFRIKDLGNLKLFLGFDVARSQQGLILNQRKYCLDILAEFGFT 1143
Query: 1191 DCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVGQP 1370
CK ++P P +KL G + +P +RRLIG+L YL TRPDI+FA QQ+SQF+ +P
Sbjct: 1144 GCKPANSPSNPTVKLKDDEGDLVQDPTAYRRLIGKLQYLTNTRPDISFAVQQVSQFMSKP 1203
Query: 1371 HTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFYGN 1550
SH AA +L+YLKGCP +GLFY + + A+S++DW+TC T KS TGYCVFYGN
Sbjct: 1204 RYSHLNAAFRILKYLKGCPGLGLFYPSANPHRIQAFSDSDWATCCITRKSTTGYCVFYGN 1263
Query: 1551 CLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQAAM 1730
CLISWK+KKQ+TVSRSS EAEY AL + CELQWL Y+A DL L +P P +CDNQ+A+
Sbjct: 1264 CLISWKSKKQSTVSRSSTEAEYRALASVACELQWLKYVADDLCLQIPLPFPTFCDNQSAI 1323
Query: 1731 HIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRILS 1910
+ NP FHERTKH+++DCH++R K DG ++L HV S+HQLAD+FTK+L F LS
Sbjct: 1324 QLAKNPSFHERTKHIEVDCHLIRAKILDGLIVLSHVPSKHQLADMFTKSLYPGPFNVNLS 1383
Query: 1911 KFGL 1922
K GL
Sbjct: 1384 KMGL 1387
Score = 395 bits (1015), Expect = e-111
Identities = 250/777 (32%), Positives = 378/777 (48%), Gaps = 12/777 (1%)
Frame = +2
Query: 2447 MLIALGAKTKLGFINGKIPEPEASSPTYDYWKKVDCMLISWILNSLSKDILDAFLYARNA 2626
M+++L K K FI+G + P + P ++ W++ + M++SW+ S++ I + ++ A
Sbjct: 1 MVVSLETKNKEKFIDGTLSCPPITDPLHEAWRRSNRMVMSWLTRSMTPSIKQSVMWMDTA 60
Query: 2627 KELWDDIAERFGGCNGPLLYQLKRDIANVTQGTLSTTVYFTKLKRLWDELSFL------D 2788
E+W D+ +RF + + L+ I QG S + Y+TKLK LW EL
Sbjct: 61 LEIWRDLKDRFSHADKFRICDLQDQILACRQGDFSVSEYYTKLKILWKELELYRCVLTCT 120
Query: 2789 PLPPCTCETNKQLIDRDMKDKLIQFLMGLNDSHEHVRSQILIMDPLPNINKAYSMLLTVE 2968
L PC C +L D +I+FL GLN+S+ VRSQI+++DP+P+I K +SM+L E
Sbjct: 121 CLTPCKCGLLSKLHKEREDDYVIRFLRGLNESYAQVRSQIMMLDPMPSIVKTFSMVLQHE 180
Query: 2969 KQRTAQLEVSELIENSAM--MSKVQGPIRDTPNRMGNNSGPPHRNRGFHRMTKEEKAKLI 3142
++ + + ++ A MS Q + N S +N F
Sbjct: 181 REFIGLIPKHSVPDSLAFAAMSTNQPRFNSSDRTNSNASKNNSKNNKF------------ 228
Query: 3143 CEHCKGPGHDVNTCFKLHGIPDWFKKLKDQRGRQGVANLVDSTGAQNNKLGASTEGNPHP 3322
CE CK H + TC+ G P ++K K VDS + + +G+P
Sbjct: 229 CEKCKKTNHTIETCYFRIGFPAGYRKNKTNNKASASLVEVDSNASLPH---LDLDGSPTN 285
Query: 3323 NMSNMIQQEVAKYLAGRMMGGSNLPSESNLSFAHFADFAGKHAPIDVHFGLSMLGNLDN- 3499
+ + + LA H+ + H + G
Sbjct: 286 DQFTFSKDQYHALLA-------------------LLQHTKAHSSLVNHSSVHNSGTSSAF 326
Query: 3500 GSWILDTGASRHMCSNPTLLSHITPISPHATICLPDGTTKSVTHSGHIRLSPHLHLHDVF 3679
WI+D+GA+ H+C +L + P I LP+ TT SG+I + L L DV
Sbjct: 327 NHWIVDSGATDHICPTKSLFHDLRATKP-IPIKLPNSTTVIANFSGNIHIGDLL-LADVL 384
Query: 3680 VVPSFKYTLLSVPQLTQQANLKCIFFPTHCVFQDLHSDKILGTGKLHGRLYILQQTPVLS 3859
VP F +L+SVP+L + +F +HC F K++G + LY L+++ L+
Sbjct: 385 FVPEFSVSLISVPKLVSTIDCMAVFCDSHCFFFQKSHFKMIGAARKIDGLYCLEESNDLN 444
Query: 3860 TPVSL---AFNSDSSFPTQVLCNGSFELWHKKLGHASISLLNHIGFLKSLCTAETTKMLQ 4030
L N + + G+ LWH +LGH S S+L L S K
Sbjct: 445 CTKVLQHSVINKSNISVVNAVNTGA--LWHHRLGHTSNSILQ---LLSSQYNDIIYKNCT 499
Query: 4031 GCDVCHQSKQHRLPFSTSSIQTSDVFELLHIDVWGLYRAPNITNTPFLLNIVDDFSRATW 4210
CD CH +K +LPF ++S +FELLH D+WG +I + L +VDDFSR TW
Sbjct: 500 PCDTCHFAKHKKLPFPVCISKSSHLFELLHADIWGPLHTISIDGHKYFLTLVDDFSRFTW 559
Query: 4211 TFLMSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQKTC 4390
L+ K+ +L +F+ ++ N F +K +R+DNG EF + FS+ GI H+ +C
Sbjct: 560 VHLLKSKAEVKTVLPKFIHLIENQFGIKLKRLRSDNGKEFFLTD---FFSSKGIFHETSC 616
Query: 4391 TYTPQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKTPF 4570
TPQQNG+VE KH+H+L++ARAL+FQS S W Y+I A L NRLP L K+P+
Sbjct: 617 IETPQQNGIVERKHQHILNVARALLFQSGLSSVFWSYAIKHAVHLINRLPTPFLENKSPY 676
Query: 4571 EVLYSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQKGYRLFDLT 4741
E ++ K P+ S L+ FGCL +A + K RA KCIFLG+ P KGY LF+LT
Sbjct: 677 ESVFGKIPDLSTLRVFGCLAFANTITSGITKLDKRASKCIFLGFKPGVKGYLLFNLT 733
>gb|KYP42321.1| Copia protein [Cajanus cajan]
Length = 1456
Score = 585 bits (1507), Expect = e-179
Identities = 309/700 (44%), Positives = 427/700 (61%), Gaps = 52/700 (7%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCPIQTPNLS------------------------ 110
KG+ LF+L + LISRDV+F E FP P++S
Sbjct: 763 KGFLLFNLHNKSFLISRDVLFYEKIFPYSAHVPSMSASDSLLLDVVKDNDTTIYSDPFPT 822
Query: 111 ------------DTPLP------------YLPV----LEDSSSSNLEFIXXXXXXXXXXX 206
DTPLP + P+ + ++ S E
Sbjct: 823 TTFSHGSPSIPLDTPLPSSETTISTDRPPFSPINTCPIPTATLSTPELPSSNTTNDASQV 882
Query: 207 XXXXXXXXXXVSHRPAYLNDFITNHVTDTAPCFHVASSVTSATHSYHHISPLFAPAYVSF 386
+ P YL ++ ++ ++ + ++S +Y++ SP ++ SF
Sbjct: 883 VMPQTRVSTRIRKPPRYLQEYYCENLASSSAASNCLYPLSSFV-TYNNCSP----SHTSF 937
Query: 387 LANVDSIQEPLSYSHARLDDNWVEAMSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVK 566
++ + EP S+ A ++ W AM EL+ALE N TW L LP GK+ +G KWVY+VK
Sbjct: 938 CLSISAQHEPTSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVK 997
Query: 567 MNPDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDIN 746
DG+++RYKARLVAKG+ Q GVDYF++FSPV KL TVRFL+ +A H+W LHQLD++
Sbjct: 998 YKVDGSVERYKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLDVD 1057
Query: 747 NAFLHGTLNEEVYMRPPEGYLAAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQ 926
NAFLHG L EEVYM+PP G+ + P VC L KSLYGLKQASR+WN +LI+ F Q
Sbjct: 1058 NAFLHGDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQKLTEALISLNFIQ 1117
Query: 927 SSHDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLG 1106
SS DH LF+K ++S TG++ ++I+ +K YL F IKDLG K+FLG
Sbjct: 1118 SSTDHSLFIKKSHSSITALLVYVDDVVLTGNDMAEISAVKAYLHAQFHIKDLGPLKFFLG 1177
Query: 1107 VEIARSEQGTYLCQRKYILDILRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRL 1286
+EIARS+ G L QRKY L++L + + DCK VSTP+ +KL G PL +P FRRL
Sbjct: 1178 LEIARSQSGLILNQRKYCLELLSEHGLTDCKPVSTPIDASVKLYASEGLPLDDPTIFRRL 1237
Query: 1287 IGRLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACS 1466
IGRLLYL TRPDI+FA QQLSQFV P +H++AAL +LRYLK P++GLFY
Sbjct: 1238 IGRLLYLTNTRPDISFAVQQLSQFVDSPRATHFQAALRILRYLKSSPALGLFYPSQTEHR 1297
Query: 1467 LTAYSNADWSTCPDTCKSLTGYCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCEL 1646
+ A+S++DW++CP+T +S+TG+C+FYG+ LISWK+KKQ+TVSRSS+EAEY AL + CEL
Sbjct: 1298 IQAFSDSDWASCPNTRRSVTGFCIFYGSALISWKSKKQSTVSRSSSEAEYRALASVTCEL 1357
Query: 1647 QWLYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLL 1826
QWL ++ DL +++PTP ++CD+Q+A++I NP FHERTKH+++DCH+ R K + G +
Sbjct: 1358 QWLLFLCHDLSINIPTPFSIFCDSQSAIYIAKNPTFHERTKHIEVDCHLTRLKIQQGLIH 1417
Query: 1827 LKHVTSRHQLADIFTKALGCQAFQRILSKFGLQDFLRSPT 1946
L HV S+ QLAD+FTKAL + F +SK L D + +PT
Sbjct: 1418 LFHVPSKSQLADVFTKALYPRNFTEAVSKLCLID-IYNPT 1456
Score = 394 bits (1012), Expect = e-110
Identities = 252/796 (31%), Positives = 392/796 (49%), Gaps = 32/796 (4%)
Frame = +2
Query: 2447 MLIALGAKTKLGFINGKIPEPEASSPTYDYWKKVDCMLISWILNSLSKDILDAFLYARNA 2626
ML AL +K K FI+G +P P S P W++ + ++SW++ S++ I + LY A
Sbjct: 1 MLTALESKNKEQFIDGSLPSPPTSDPLRSTWRRCNKTVMSWLIRSMTPSIAQSVLYMDTA 60
Query: 2627 KELWDDIAERFGGCNGPLLYQLKRDIANVTQGTLSTTVYFTKLKRLWDELSFLDPL---- 2794
E+W D+ ERF + + L+ + QG + + Y+T LK LW +L +
Sbjct: 61 AEIWKDLCERFSHGDKFRISDLQASVHECKQGDSTVSQYYTHLKTLWKQLEQYRSVLICS 120
Query: 2795 --PPCTCETNKQLIDRDMKDKLIQFLMGLNDSHEHVRSQILIMDPLPNINKAYSMLLTVE 2968
PC+C ++ D +I+FL GLN+ + VRS IL+MDP+P+I K +S++ E
Sbjct: 121 CDNPCSCGILLKIKKEREDDCVIKFLRGLNEEYSQVRSNILMMDPMPSITKTFSLIQQHE 180
Query: 2969 KQRTAQLEVSELIENSAMMSKVQGPIRDTPNRMG----NNSGPPHRNRGFHRMTKEE-KA 3133
++ +S ++++ + ++ + G N G NRG R + +
Sbjct: 181 REIGGTSLLSPSTDSTSFAALTDASMKPSSFERGGSSNNRGGGSSNNRGGGRFGRGNGRG 240
Query: 3134 KLICEHCKGPGHDVNTCFKLHGIPDWFKKL-KDQRGRQGVANL--VDSTGAQNNKLGAST 3304
C CK H +++CF+++G P ++ K + ANL VDS A + A+
Sbjct: 241 NRFCAKCKKTNHTIDSCFEIYGYPAGYRNRDKSNSTSKAFANLTTVDSDTASRS---ATP 297
Query: 3305 EGNPHPNMSNMIQQEVAKYLAGRMMGGSNLPSESNLSFAHFADFAGKHAPIDVHFGLSML 3484
E + + + +++ +LA + ++P N H +P G
Sbjct: 298 EESSNQTQFTLSKEQYHAFLA-LIQQNKDVPHSVN----HVQQNPKNSSP-----GTPFS 347
Query: 3485 GNLDNGSWILDTGASRHMCSNPTLLSHITPISPHATICLPDGTTKSVTHSGHIRLSPHLH 3664
+L W+LD+GA+ H+C + L + PI P +I LP+ TT SG +RL L
Sbjct: 348 SSL----WVLDSGATDHICPSQHLFDSLNPIKP-ISISLPNHTTVLAKLSGTVRLGD-LV 401
Query: 3665 LHDVFVVPSFKYTLLSVPQLTQQANLKCIFFPTHCVFQDLHSDKILGTGKL-HGRLYILQ 3841
L + F VP F L+S+P+LT L +F T+C + K +G K G Y+L
Sbjct: 402 LPNTFYVPHFAMHLISIPRLTSSDCL-ILFCDTNCHIVQKSTSKTIGVAKKKQGLFYLLN 460
Query: 3842 QTPVLSTPVSLA-----FNS----------DSSFPTQVLCN--GSFELWHKKLGHASISL 3970
T +L FN D+ + + N LWH KLGH +
Sbjct: 461 SVEHDLTASTLLDIHPFFNQCFSTINNTVHDTLYKNAINNNTLNDSMLWHSKLGHVPNKV 520
Query: 3971 LNHIGFLKSLCTAETTKMLQGCDVCHQSKQHRLPFSTSSIQTSDVFELLHIDVWGLYRAP 4150
+ I S A + CDVCH SKQ L FS S +S FEL+H+D+WG
Sbjct: 521 MQQICSQNS---AIPFHKFEVCDVCHYSKQKNLSFSNSHTTSSRFFELIHVDIWGPLNVS 577
Query: 4151 NITNTPFLLNIVDDFSRATWTFLMSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEF 4330
+ + L +VDD+SR TWT L+ KS +L F+ ++ F +K +R+DNG EF
Sbjct: 578 SFQGYKYFLTVVDDYSRFTWTHLLKTKSEVKAILPSFITLIEKQFDVHLKRLRSDNGKEF 637
Query: 4331 LSLECQTLFSAHGIIHQKTCTYTPQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSIL 4510
F GI+H+ +C PQQNG+VE KH+H+L++ RAL+FQ+ P W +++
Sbjct: 638 Y---LHDFFQNKGILHETSCVERPQQNGIVERKHQHILNVCRALLFQAKLPKQFWSFAVK 694
Query: 4511 TATFLTNRLPVSVLHWKTPFEVLYSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCI 4690
AT + NRLP +L K+PFE++Y+ P+ + LK FGCL +AT + + K RA KCI
Sbjct: 695 QATHIINRLPTPLLSQKSPFEMIYNCKPDLTELKVFGCLAFATTLSSKRTKLDRRASKCI 754
Query: 4691 FLGYLPNQKGYRLFDL 4738
FLGY KG+ LF+L
Sbjct: 755 FLGYKNGTKGFLLFNL 770
>gb|KYP38774.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 727
Score = 556 bits (1434), Expect = e-177
Identities = 307/682 (45%), Positives = 404/682 (59%), Gaps = 31/682 (4%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCP------------IQTPNLS--------DTPL 122
KGY + D++T + IS++V+F ED FP I T N T
Sbjct: 48 KGYLVMDISTRNIFISKNVLFYEDVFPFHNKVSASDLDHDMINTNNFYFLFADIHVSTHN 107
Query: 123 PYLPVLEDSSSSNLEF---IXXXXXXXXXXXXXXXXXXXXXVSHRPAYLNDFITNHVT-- 287
+ V+ + ++N+ + AYL D+ N +T
Sbjct: 108 TNINVISNDHNNNINHHDESQVPLECNSPDATPTIIKRSTRTKYPLAYLTDYHCNLLTGH 167
Query: 288 DTAPCFHVASSVTSATHSYHHISPLFAPAYVSFLANVDSIQEPLSYSHARL-DDNWVEAM 464
DT+ F A S SY ++SP + F + S+ EP +Y + ++W++AM
Sbjct: 168 DTS-IFKDARYPLSTVLSYSNLSP----THSHFTLIISSLIEPKNYLELAIKSEHWIKAM 222
Query: 465 SKELEALEFNGTWLLTELPP-----GKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQ 629
EL+AL N TW L LP GK IGSKWVYK+K DGTI+RYKARLVAKGY+Q
Sbjct: 223 QNELDALRLNRTWSLVNLPTVNLPTGKVPIGSKWVYKIKYKSDGTIERYKARLVAKGYNQ 282
Query: 630 IHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYL 809
I G+DYFD+F+PVAK+ TVR L+ +A+ W LHQLDINNAFLHG LNEEVYM+ P+G
Sbjct: 283 IEGLDYFDTFAPVAKITTVRMLLAIASCQKWELHQLDINNAFLHGDLNEEVYMQIPQGLT 342
Query: 810 AAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXX 989
+ KP VC L KSLYGLKQAS++W L ++QS +DH LF K N F
Sbjct: 343 SPKPNLVCKLHKSLYGLKQASKQWFAKLSNFLQTMNYKQSPNDHSLFTKHINNHFTLILV 402
Query: 990 XXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDI 1169
G++ S+I +K LD F IKDLG+ KYFLG+E+ARS G +L QRKY LD+
Sbjct: 403 YVDDLIIGGTDSSEIVSIKGILDAQFKIKDLGHLKYFLGLEVARSHLGIHLSQRKYALDL 462
Query: 1170 LRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQL 1349
L DT + K V TP+ K GTP ++P +RRL+G+LLYL TRPDI+FA QQL
Sbjct: 463 LSDTGFLAAKPVPTPMVKTNKASQSDGTPYADPAGYRRLVGKLLYLTTTRPDISFAVQQL 522
Query: 1350 SQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTG 1529
SQ + P T+H+ AA VLRYLKG P GLFY + L A+S++DW +CP +C+S++G
Sbjct: 523 SQHISSPSTAHYMAATRVLRYLKGNPGQGLFYPAQSPSQLKAFSDSDWGSCPTSCRSVSG 582
Query: 1530 YCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLW 1709
YC+F G+ LISWK KKQ+T+SRSS+EAEY AL TVCE+QWL Y+ D + + L+
Sbjct: 583 YCIFLGDSLISWKCKKQSTISRSSSEAEYRALANTVCEIQWLTYLLHDFVIPFTSHALLY 642
Query: 1710 CDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQ 1889
CDNQ+A +I NPVFHERTKH+D+DCHI+R K + L + S QLADI TK L
Sbjct: 643 CDNQSARYIATNPVFHERTKHIDLDCHIIREKLQAKLFHLLPIRSTEQLADILTKPLEPT 702
Query: 1890 AFQRILSKFGLQDFLRSPT*GG 1955
F +LSK G+ + + SP GG
Sbjct: 703 PFNYLLSKLGVLN-IYSPACGG 723
>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Gossypium raimondii]
Length = 683
Score = 555 bits (1429), Expect = e-176
Identities = 299/653 (45%), Positives = 404/653 (61%), Gaps = 13/653 (1%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCPIQTPNLSDTPLPYLP--VLEDSSSSNLEFIX 176
KGY L D+ T + +SR+V F E FP + N TP+ L + DS S +
Sbjct: 38 KGYILLDIETRAIFVSRNVTFHETIFPFLQHSLNNPTTPVGLLASDTIYDSPISPPQPSS 97
Query: 177 XXXXXXXXXXXXXXXXXXXXVSHR--PAYLNDF-------ITNHVTDTAPCFHVASSVTS 329
+R P+YL D+ TNH F+ S
Sbjct: 98 TDQSSSTSHPPTQPSTSSRPQRNRRPPSYLQDYQHYQLPAATNHPGTPHSIFNCIS---- 153
Query: 330 ATHSYHHISPLFAPAYVSFLANVDSIQEPLSYSHARLDDNWVEAMSKELEALEFNGTWLL 509
YH++SP ++ F + + EP +Y A +W EAM E+ ALE N TW +
Sbjct: 154 ----YHNLSP----QHLHFTLAISASIEPKTYKQASKFTHWNEAMQAEINALEQNNTWTM 205
Query: 510 TELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVAKLVTVR 689
T LPPGK G KWV++VK DG+ +RYKARLVAKGY QI GVDYFD+FSPVAK+ TVR
Sbjct: 206 TTLPPGKTPXGCKWVFRVKHRADGSTERYKARLVAKGYTQI-GVDYFDTFSPVAKITTVR 264
Query: 690 FLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPGQVCLLKKSLYGLKQA 869
L+ +AT HW + QLD+NNAFLHG LNE+VYM PP G+ + +VC L KS+YGLKQA
Sbjct: 265 LLLALATSRHWHIQQLDVNNAFLHGDLNEDVYMLPPPGF-SHDSTKVCKLHKSIYGLKQA 323
Query: 870 SREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESDIAHLKH 1049
SR+W + +LI+ G+ QS+ DH +F K + F TG++ +I +K
Sbjct: 324 SRQWFSKLTTALISLGYIQSTADHSMFTKKHSEDFTVLLIYVDDIILTGTSSPEIMKVKQ 383
Query: 1050 YLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTKMMDCKVVSTPLPPG- 1226
+LD F IKDLG KYFLG+E+AR+ QG ++ QRKY L+IL+++ ++CK TP+
Sbjct: 384 FLDTTFRIKDLGDLKYFLGLEVARTSQGIHISQRKYALEILQESGFIECKPAKTPMATKS 443
Query: 1227 -IKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEAALHV 1403
KL G LS+ +R+L+G+LLYL TR D+ FA QQLSQF+ +P T+H +AA V
Sbjct: 444 VYKLTSTDGELLSDITSYRQLVGKLLYLTSTRLDLTFAVQQLSQFMDKPTTNHLQAAHRV 503
Query: 1404 LRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFYGNCLISWKTKKQT 1583
LRYLKGCPS GLFY S++ L A+S++DW+ CP+T +S+TGYC+F+G LISW+ KKQ
Sbjct: 504 LRYLKGCPSTGLFYPASSSFELKAFSDSDWAGCPETRRSITGYCIFFGEALISWRAKKQP 563
Query: 1584 TVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPVFHER 1763
TVSRSS+EAEY AL +TVCE+QWL+Y+ DL + + ++CDN++ + I +NP FHER
Sbjct: 564 TVSRSSSEAEYRALASTVCEVQWLHYLLCDLHVPISHATPVFCDNKSTIQIASNPTFHER 623
Query: 1764 TKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRILSKFGL 1922
TKH++IDCHIVR K + + L TS QLAD+FTKAL Q FQ ++SK G+
Sbjct: 624 TKHIEIDCHIVREKLQKDIVHLLPCTSSAQLADLFTKALAAQPFQDMISKLGM 676
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 568 bits (1463), Expect = e-176
Identities = 307/643 (47%), Positives = 399/643 (62%), Gaps = 3/643 (0%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPC---PIQTPNLSDTPLPYLPVLEDSSSSNLEFI 173
KGY L +L T +L+S++VIF ED FP P S P+PY S S+
Sbjct: 487 KGYLLVNLHTHGLLVSQNVIFHEDHFPSFTKPNSPSFSSPVPIPYNYADYPSFPSSSIVE 546
Query: 174 XXXXXXXXXXXXXXXXXXXXXVSHRPAYLNDFITNHVTDTAPCFHVASSVTSATHSYHHI 353
P YL DF T T P H ++ + HS+
Sbjct: 547 SSEPPPPDQHSSPPPLRRSTRPRRPPTYLQDF-HGAFTSTGP--HSSTGIRHPLHSFISY 603
Query: 354 SPLFAPAYVSFLANVDSIQEPLSYSHARLDDNWVEAMSKELEALEFNGTWLLTELPPGKK 533
L +P++ ++ ++ S+ +P ++ A D+W++AM +E+ ALE N TW+LT LPP K
Sbjct: 604 DRL-SPSFHHYVFSISSVTKPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKT 662
Query: 534 AIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIVVATQ 713
AIG +WVYKVK DG+IDRYKARLVAKGY Q+ G+D+FD+FSPVAKL TVR LI +A
Sbjct: 663 AIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLISLAAI 722
Query: 714 HHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPGQVCLLKKSLYGLKQASREWNTAF 893
H+ L QLD+NN+FLHG LNEEVYM+ P G + PGQVC L++SLYGLKQASR+W
Sbjct: 723 HNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYARL 782
Query: 894 CGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESDIAHLKHYLDGLFTI 1073
LI +G+ S DH LFLK G++ ++I HL L F I
Sbjct: 783 SSFLIQHGYVPSPSDHSLFLKCSPAITTAILIYVDDIVLAGNDLTEIHHLTSLLHNTFQI 842
Query: 1074 KDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTKMMDCKVVSTPLPPGIKLIHGAGT 1253
KDLG KYFLG+E+AR+ G +LCQRKY LD+L DT M+ K VSTP+ L +GT
Sbjct: 843 KDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDTGMLASKPVSTPMDYSTHLSASSGT 902
Query: 1254 PLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEAALHVLRYLKGCPSV 1433
P ++ +RRL+GRL+YL TRP IA+A QQLSQFV P T+H +A +L YLKG P
Sbjct: 903 PFTDTAAYRRLVGRLIYLPNTRPAIAYAVQQLSQFVSNPPTAHRQALFRILCYLKGTPGS 962
Query: 1434 GLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFYGNCLISWKTKKQTTVSRSSAEAE 1613
G+F SV+++ L A+S+ DW+ CPDT +S+TG+ V+ G+ LISWK+KKQ TVSRSS+EAE
Sbjct: 963 GIFLSVNSSVQLRAFSDYDWAGCPDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAE 1022
Query: 1614 YCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPVFHERTKHLDIDCHI 1793
Y AL TT CELQWL Y+ +D + L P L+CDNQ A+ I +NP+FHERTKH++IDCHI
Sbjct: 1023 YRALATTTCELQWLSYLLKDFHIDLIRPSILYCDNQFALQIASNPIFHERTKHIEIDCHI 1082
Query: 1794 VRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRILSKFGL 1922
VR+K G L L V+S QLADI TK L F SK G+
Sbjct: 1083 VRDKVSTGLLKLLPVSSSLQLADILTKPLSPFVFHSHYSKLGM 1125
Score = 303 bits (775), Expect = 3e-81
Identities = 190/533 (35%), Positives = 273/533 (51%), Gaps = 1/533 (0%)
Frame = +2
Query: 3143 CEHCKGPGHDVNTCFKLHGIPDWFKKLKDQRGRQGVANLVDSTGAQNNKLGASTEGNPHP 3322
C HC GH + C++ HG P K L D+ V+ T + K+ ST+
Sbjct: 1 CTHCGKTGHTIEVCYQKHGFPPGSKPLSDKTAS------VNHTVTGDCKVTESTQSLESQ 54
Query: 3323 NMSNMIQQEVAKYLAGRMMGGSNLPSESNLSFAHFADFAGKHAPIDVHFGLSMLGNLDNG 3502
++ QQ A L + + S S SF PI V +S
Sbjct: 55 DVRFTPQQYQA--LLALIQQSTTGTSASCTSF-----------PI-VCSAIST-----PS 95
Query: 3503 SWILDTGASRHMCSNPTLLSHITPISPHATICLPDGTTKSVTHSGHIRLSPHLHLHDVFV 3682
SWILD+GA+ H+ S + S +PI+P + LP G S THSG ++ + +L DV
Sbjct: 96 SWILDSGATDHVSSTLSHFSSFSPINP-IDVKLPTGQHVSATHSGIVKFTNSFYLVDVLY 154
Query: 3683 VPSFKYTLLSVPQLTQQANLKCIFFPTHCVFQDLHSDKILGTGKLHGRLYILQQTPVLST 3862
+P F Y L+S+ +L + + IF C+ Q+ ++ K +GT ++G LY T
Sbjct: 155 IPDFTYNLISISKLVSSLSCQFIFDRHSCIIQETNTMKKIGTVDVNGGLYSF-------T 207
Query: 3863 PVSLAFNSDSSFPTQVLCN-GSFELWHKKLGHASISLLNHIGFLKSLCTAETTKMLQGCD 4039
++ S +S C+ +LWH ++GH S L +K + C+
Sbjct: 208 ANNIHNPSTNSIIVHPKCSIQPIDLWHFRMGHLSQERLQ---LMKQSFPFLSVDKSFSCN 264
Query: 4040 VCHQSKQHRLPFSTSSIQTSDVFELLHIDVWGLYRAPNITNTPFLLNIVDDFSRATWTFL 4219
CH KQ +L F S F+LLH+D+WG ++ + L IVDD +R TW FL
Sbjct: 265 TCHHDKQKKLSFPLSHSYALQPFDLLHMDIWGPCPVTSMHGHKYFLAIVDDHTRFTWLFL 324
Query: 4220 MSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQKTCTYT 4399
M +KS T + + F+ V F K+VK IRTDNG EF + FS+ GIIHQ TC T
Sbjct: 325 MQNKSETRQHIINFINQVETQFDKNVKVIRTDNGLEFSMTQ---YFSSKGIIHQTTCVET 381
Query: 4400 PQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKTPFEVL 4579
PQQNG+VE KH+HLL++ R+L+FQ+N PS W +++ A FL N +P LH +PFE L
Sbjct: 382 PQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEKL 441
Query: 4580 YSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQKGYRLFDL 4738
Y + S L+ FGCLCY++ + H+ K RAH CIFLG+ P+ KGY L +L
Sbjct: 442 YGHPCDISILRVFGCLCYSSIITSHRTKLDPRAHPCIFLGFKPHTKGYLLVNL 494
>gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 515
Score = 545 bits (1405), Expect = e-175
Identities = 271/504 (53%), Positives = 347/504 (68%)
Frame = +3
Query: 411 EPLSYSHARLDDNWVEAMSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTID 590
EP ++ A D+W++AM +E+ ALE N TW+LT LPP K AIG +WVYK K DG+ID
Sbjct: 1 EPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKAKHKADGSID 60
Query: 591 RYKARLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTL 770
RYKARLVAKGY Q+ G+D+FD+FSPVAKL VR L+ + H+W L QLD+NN+FLHG L
Sbjct: 61 RYKARLVAKGYTQMEGLDFFDTFSPVAKLTIVRLLLSLVAIHNWHLKQLDVNNSFLHGDL 120
Query: 771 NEEVYMRPPEGYLAAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLF 950
NEEVYM+ P G + PGQVC L++SLYGLKQASR+W LI +G+ S DH LF
Sbjct: 121 NEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLF 180
Query: 951 LKGDNTSFXXXXXXXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQ 1130
LK + G++ ++I HL L F IKDLG KYFLG+E+AR+
Sbjct: 181 LKCSPATITAILIYVDDLVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHT 240
Query: 1131 GTYLCQRKYILDILRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLN 1310
G +LCQRKY LD+L DT M+ K VSTP+ L +GTPL++ +RRL+GRL+YL
Sbjct: 241 GIHLCQRKYTLDLLSDTGMLASKPVSTPMDYSTHLFASSGTPLTDTAAYRRLVGRLIYLT 300
Query: 1311 FTRPDIAFATQQLSQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNAD 1490
TRPDI +A QQLSQFV P T+H +A +LRYLKG P G+F SV+++ L A+S++D
Sbjct: 301 NTRPDITYAVQQLSQFVTNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSD 360
Query: 1491 WSTCPDTCKSLTGYCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQ 1670
W+ CPDT +S+TG+ V+ G+ LISWK+KKQ TVSRSS+EAEY AL TT CELQWL Y+ +
Sbjct: 361 WAGCPDTRRSITGFAVYLGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLK 420
Query: 1671 DLQLSLPTPIDLWCDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRH 1850
D + L P L+CDNQ A+ I +NP+FHERTKH++IDCHIVR+K G L L V+S
Sbjct: 421 DFHIDLIRPSILYCDNQFALQISSNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSL 480
Query: 1851 QLADIFTKALGCQAFQRILSKFGL 1922
QLADI TK L F+ SK G+
Sbjct: 481 QLADILTKPLSPFVFRSHCSKLGM 504
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 570 bits (1468), Expect = e-173
Identities = 310/666 (46%), Positives = 402/666 (60%), Gaps = 26/666 (3%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFP---------CPIQTPNLSDTPLPYL-----PVL 140
KG+ + DL T + +SR+V+F E FP Q N + YL PV
Sbjct: 745 KGFLVLDLLTRSIFVSRNVVFYEHIFPFFEKGSTVITNSQQQNDACFDFLYLDSSSHPVT 804
Query: 141 EDSSSSNLEF--------IXXXXXXXXXXXXXXXXXXXXXVSHR--PAYLNDFITNHVTD 290
+SS L+ + H+ PAYL D+ N +
Sbjct: 805 TIDNSSLLDIDSAHYENDLNDIDESAHPSETSSPSQLRKSTRHKCSPAYLKDYHCNLLIG 864
Query: 291 TAPCF--HVASSVTSATHSYHHISPLFAPAYVSFLANVDSIQEPLSYSHARLDDNWVEAM 464
P H+ + + SY +S +Y ++ ++ + EP +++ A + WVEAM
Sbjct: 865 VPPPEDKHIRYPLNTVL-SYDSLSA----SYSRYVLSITTHVEPHTFNQAVKNKVWVEAM 919
Query: 465 SKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVD 644
EL+ALE N TW + LPPGK IGSKWVYK+K DG+I+RYKARLV KGY QI G+D
Sbjct: 920 QAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQGLD 979
Query: 645 YFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPG 824
YFD+F+PVAKL TVR L+ +A+ HW LHQLDINNAFLHG L E+VYM P+G KP
Sbjct: 980 YFDTFAPVAKLSTVRMLLAIASCQHWELHQLDINNAFLHGDLLEDVYMEIPQGLNIDKPN 1039
Query: 825 QVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXX 1004
VC L KSLYGLKQASR+W L++ ++QS HDH LF K T F
Sbjct: 1040 HVCKLNKSLYGLKQASRQWFAKLSSFLLSLHYKQSQHDHSLFTKHHGTHFTVILIYVDDL 1099
Query: 1005 XXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTK 1184
G++ +I H+K LD F IKDLG +YFLG+EIARS G L QRKY LD+L +T
Sbjct: 1100 IIAGTDSEEINHIKQSLDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDETS 1159
Query: 1185 MMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVG 1364
+ K V TP+ G +L H +P +P +RRLIG+LLYL TRPDI+++ QQLSQF+
Sbjct: 1160 FLAGKPVLTPIIKGTRLSHTTDSPYEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQFLS 1219
Query: 1365 QPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFY 1544
P SH++AA+ VLRYLKG P GLFY + L A+S++DW++CPDT +SL+GY +F
Sbjct: 1220 CPQQSHYQAAIRVLRYLKGNPGQGLFYPADSPLQLKAFSDSDWASCPDTRRSLSGYSIFL 1279
Query: 1545 GNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQA 1724
GN LISWK KKQ+T+SRSS+EAEY AL T CE+QWL Y+ QD + TP L+CDNQ+
Sbjct: 1280 GNSLISWKCKKQSTISRSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDNQS 1339
Query: 1725 AMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRI 1904
A HI +N VFHERTKH++IDCH+VR K + G L + S HQLADI TK L FQ +
Sbjct: 1340 ARHIASNAVFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQYL 1399
Query: 1905 LSKFGL 1922
LSK G+
Sbjct: 1400 LSKLGV 1405
Score = 442 bits (1138), Expect = e-127
Identities = 270/773 (34%), Positives = 403/773 (52%), Gaps = 9/773 (1%)
Frame = +2
Query: 2447 MLIALGAKTKLGFINGKIPEPEASSPTYDYWKKVDCMLISWILNSLSKDILDAFLYARNA 2626
M+ AL +K K F++G I EP+ S+ +D W + + M++SWI S+S+ I + +Y NA
Sbjct: 1 MMRALLSKNKFKFVDGSIQEPQKSNELHDAWVRCNTMILSWITKSVSEQIAQSVIYINNA 60
Query: 2627 KELWDDIAERFGGCNGPLLYQLKRDIANVTQGTLSTTVYFTKLKRLWDELSFLDPLPPCT 2806
+ LW+D+ ERF + L ++I ++ Q + + YFT+LK LW+EL L P P CT
Sbjct: 61 QRLWEDLKERFSKGDYFRFSDLLQEIHSIKQADRTISSYFTELKILWEELESLRPTPTCT 120
Query: 2807 CET------NKQLIDRDMKDKLIQFLMGLNDSHEHVRSQILIMDPLPNINKAYSMLLTVE 2968
C+ + ++ D + +I FL GLND + V+SQILIMDPLP INK +S++L E
Sbjct: 121 CDVRCSCDLSTKVKDYKDTEYVICFLKGLNDQYNTVKSQILIMDPLPVINKVFSLVLQQE 180
Query: 2969 KQR-TAQLEVSELIENSAMMSKVQGPIRDTPNRMGNNSGPPHRNRGFHRMTKEEKAKLIC 3145
+Q+ T L S + ++ ++ G R + N G +S R G T K +C
Sbjct: 181 RQQNTPNLADSRIF---SLNTQSGGNWRSSSNGRGGSSRGRGRTGGRGSFTNAGK---VC 234
Query: 3146 EHCKGPGHDVNTCFKLHGIPDWFKKLKDQRGRQGVANLVDSTGAQNNKLGASTEGNPHPN 3325
C H +++C+ HG P FK KD +G N + S S + N +
Sbjct: 235 TFCGKENHTIDSCYFKHGFPPNFK-FKD-KGNTTSINTISSKAPSTQASEISRKQNKE-S 291
Query: 3326 MSNMIQQEVAKYLAGRMMGGSNLPSESNLSFAHFADFAGKHAPIDVHFGLSMLGN-LDNG 3502
SN ++ + P S H + + + GN L++
Sbjct: 292 TSNFTHEDYDHLIDMLKRAKLQSPEHSINQLVHQTTTESVSSS---NLQQNQPGNPLEHT 348
Query: 3503 SWILDTGASRHMCSNPTLLSHITPISPHATICLPDGTTKSVTHSGHIRLSPHLHLHDVFV 3682
WILDTGA+ H+C++ + PI P + LP+G T + SG I S L+DV
Sbjct: 349 DWILDTGATDHVCNSLYFFTKYHPIDP-VHVKLPNGNTSTAQFSGTIIFSEKFFLNDVLY 407
Query: 3683 VPSFKYTLLSVPQLTQQANLKCIFFPTHCVFQDLHSDKILGTGKLHGRLYILQQTPVLST 3862
+P+F ++SV ++ + + +F C+ QDL S K +G ++ LYILQ+ P
Sbjct: 408 IPNFHLNIISVQKIAASLDYELMFNKNSCIIQDLTSKKTIGLAEVKNHLYILQR-PSKDN 466
Query: 3863 PVSLAFNSDSSFPTQVL-CNGSFELWHKKLGHASISLLNHIGFLKSLCTAETTKMLQGCD 4039
+S A S+S Q SF+LWH +LGH S +L + K L T CD
Sbjct: 467 SIS-ACKSNSVLNAQPKGTTSSFDLWHYRLGHPSHVVLQTV---KRLFPYVTYNKNITCD 522
Query: 4040 VCHQSKQHRLPFSTSSIQTSDVFELLHIDVWGLYRAPNITNTPFLLNIVDDFSRATWTFL 4219
CH KQ RLPF TS+ ++ F+L+H+D+WG P+I + L IVDD+SR TW +
Sbjct: 523 YCHFGKQARLPFPTSTTKSLSCFDLVHMDIWGPLAIPSIHGHKYFLTIVDDYSRHTWIYF 582
Query: 4220 MSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQKTCTYT 4399
M K T L+ F++ V F K +K +R+DNG EF L++ +GI+HQ +C T
Sbjct: 583 MKSKGETRNLIQNFISYVQTQFTKHIKVLRSDNGVEFAM---DQLYATYGIVHQTSCVET 639
Query: 4400 PQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKTPFEVL 4579
PQQN VVE KHRH+L+I R L+F SN P W Y++ A L NRLP VL+ +P+++L
Sbjct: 640 PQQNSVVERKHRHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRLPSPVLNNSSPYQML 699
Query: 4580 YSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQKGYRLFDL 4738
Y K P LK FG LCYA+ + + K +A K ++LG KG+ + DL
Sbjct: 700 YDKPPTLLDLKVFGSLCYASTLVQGRSKLAPKATKGVYLGVKQGTKGFLVLDL 752
>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1353
Score = 566 bits (1459), Expect = e-173
Identities = 304/677 (44%), Positives = 414/677 (61%), Gaps = 34/677 (5%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPC--------------PI-QTPNLSDTPLPY--- 128
KG+ ++DL T + ISRDV F E+ FP PI Q P S P+P
Sbjct: 679 KGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSHTH 738
Query: 129 --------------LPVLEDSSSS--NLEFIXXXXXXXXXXXXXXXXXXXXXVSHRPAYL 260
LP+ S+S N+E V +RP YL
Sbjct: 739 DNLDETEHEHNSSTLPMTNSSNSDQPNIEI-----------NIPEIRRTSQRVKNRPGYL 787
Query: 261 NDFITNHVTDTAPCFHVASSVTSATHSYHHISPLFAPAYVSFLANVDSIQEPLSYSHARL 440
D+ H T A +SS S + ++ SF++ + SI EP SY A
Sbjct: 788 QDY---HCTLAASKVDQSSSTARYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAIN 844
Query: 441 DDNWVEAMSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKG 620
D W EA+ EL+AL+ TW+LT+LPP K+A+G +WV+KVK + DG+++RYKARLVAKG
Sbjct: 845 HDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKG 904
Query: 621 YHQIHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPE 800
+ QI G+DY D+FSPV ++ T+R + +A +W +HQLDIN AFLHG L EEVYM+PP
Sbjct: 905 FTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPPP 964
Query: 801 GYLAAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXX 980
G + + P +VC L+KSLYGLKQ SR+WN +L +GF QS D+ LF K N F
Sbjct: 965 GLILSSPNKVCKLQKSLYGLKQVSRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFIA 1024
Query: 981 XXXXXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYI 1160
+GS+E++I +K LD F+IKDLG YFLG+E +RS+QG +CQRKY
Sbjct: 1025 ILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKYA 1084
Query: 1161 LDILRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFAT 1340
L++L+DT ++ K STP+ +L H S+P +RRL+GRL+YL TRPD+AFA
Sbjct: 1085 LELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAV 1144
Query: 1341 QQLSQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKS 1520
+LSQF+ QP+ +H++AA VLRY+K P+ GLF+ S+ LT Y+++DW+TCPD+ +S
Sbjct: 1145 GKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRS 1204
Query: 1521 LTGYCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPI 1700
++G+C F GN L+SWK+KKQ VSRSS+EAEY AL VCE QWL+ + D QL PI
Sbjct: 1205 ISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPI 1264
Query: 1701 DLWCDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKAL 1880
L+CDNQ+A++I ANPVFHERTKH++IDCH VR++ + GF+ L +TS QLADI TK L
Sbjct: 1265 SLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADILTKPL 1324
Query: 1881 GCQAFQRILSKFGLQDF 1931
+ FQ + K GL +F
Sbjct: 1325 LPKMFQDFVCKLGLSNF 1341
Score = 418 bits (1075), Expect = e-119
Identities = 252/766 (32%), Positives = 388/766 (50%), Gaps = 2/766 (0%)
Frame = +2
Query: 2447 MLIALGAKTKLGFINGKIPEPEASSPTYDYWKKVDCMLISWILNSLSKDILDAFLYARNA 2626
ML+ LG K KL F++G + P + W + + ++ISWI+ SL ++ + ++ A
Sbjct: 1 MLLVLGTKNKLAFVDGSLARPVTAGVDQTAWDRCNKLVISWIVQSLDTSLIPSVIWMPTA 60
Query: 2627 KELWDDIAERFGGCNGPLLYQLKRDIANVTQGTLSTTVYFTKLKRLWDELSFLDPLPPCT 2806
++W+D+ +R+ + + +L +I ++ QG +S T YFT L+ LW EL P+P CT
Sbjct: 61 SQIWNDLKKRYYQGDAFRISELLEEIYSLKQGNMSITHYFTTLQGLWQELDHFCPIPSCT 120
Query: 2807 CETNKQLIDRDMKDKLIQFLMGLNDSHEHVRSQILIMDPLPNINKAYSMLLTVEKQRTAQ 2986
C T + FL GLN+ + +VRSQ+++MDPLP++ K +SM+L E++
Sbjct: 121 CFTTR-------------FLKGLNEQYSNVRSQVMLMDPLPSVQKVFSMILQQEREFHGT 167
Query: 2987 LEVSELIENSAMMSKVQGPIRDTPNRMGNNSGPPHRNRGFHRMTKEEKAKLICEHCKGPG 3166
+ L S NN ++ + K+ K +C HC G
Sbjct: 168 NDNQVLAVTS------------------NNERNNYKGSKTFKRNKDYNTK-VCSHCGRIG 208
Query: 3167 HDVNTCFKLHGIPDWFKKLKDQRGRQGVANLVDSTGAQNNKLGASTEGNP--HPNMSNMI 3340
H V++C+K HG P L+ + GR + N S ++ S N NM
Sbjct: 209 HLVDSCYKKHGPP-----LQHKHGR--IVNQYQSVSDEDTDDDQSVHSQRVVSHNSGNMF 261
Query: 3341 QQEVAKYLAGRMMGGSNLPSESNLSFAHFADFAGKHAPIDVHFGLSMLGNLDNGSWILDT 3520
E + L + + S ++H +D WI+DT
Sbjct: 262 TPEQHQALLALLQQSGMILS---FPYSHNSD-----------------------CWIIDT 295
Query: 3521 GASRHMCSNPTLLSHITPISPHATICLPDGTTKSVTHSGHIRLSPHLHLHDVFVVPSFKY 3700
GA+ H+C N I P I LP+G+ S SG + LS +L DV +P+F +
Sbjct: 296 GATDHVCKNINFFQSYRRIKP-ILIQLPNGSQVSTCVSGTVLLSKTCYLTDVLFIPNFHF 354
Query: 3701 TLLSVPQLTQQANLKCIFFPTHCVFQDLHSDKILGTGKLHGRLYILQQTPVLSTPVSLAF 3880
L+SV +L + + F + C Q HS +++G +L LY + +P ++
Sbjct: 355 NLISVSKLAKTLSCTLTFSDSDCQIQANHSMRMIGAAELRAGLYAMVSSP----ESNVVH 410
Query: 3881 NSDSSFPTQVLCNGSFELWHKKLGHASISLLNHIGFLKSLCTAETTKMLQGCDVCHQSKQ 4060
+ S F T +LWH +LGH S L+ + S + K+ C++CH +K
Sbjct: 411 HCTSHFFTY-----QSDLWHLRLGHLSHDKLSALK--GSYPEIQCNKISLPCEICHLAKH 463
Query: 4061 HRLPFSTSSIQTSDVFELLHIDVWGLYRAPNITNTPFLLNIVDDFSRATWTFLMSHKSHT 4240
RLPF S ++ +VF+L+H+D+WG +I + L IVDD SR TW F M +K T
Sbjct: 464 KRLPFPDSLTKSENVFDLIHVDIWGPLSVASIFGHKYFLTIVDDKSRFTWIFFMKNKFET 523
Query: 4241 PKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQKTCTYTPQQNGVV 4420
LL F++ V FQ+++K IRTDNG+EFL + ++ GI+HQ +C TPQQNGVV
Sbjct: 524 KLLLQNFVSFVQTQFQQNIKTIRTDNGSEFL---LKDWYAKLGIVHQTSCVNTPQQNGVV 580
Query: 4421 ECKHRHLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKTPFEVLYSKTPNY 4600
E KH+H+L +ARALMFQSN W Y+I A L NRLP L +P+ VLYS+ P++
Sbjct: 581 ERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEKPDF 640
Query: 4601 SGLKPFGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQKGYRLFDL 4738
S LK FGCL +A+ + ++ K R+ KC+FLGY KG+ ++DL
Sbjct: 641 SHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDL 686
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 568 bits (1463), Expect = e-173
Identities = 305/677 (45%), Positives = 415/677 (61%), Gaps = 34/677 (5%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPC--------------PI-QTPNLSDTPLPY--- 128
KG+ ++DL T + ISRDV F E+ FP PI Q P S P+P
Sbjct: 749 KGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTSCDPIPSHTH 808
Query: 129 --------------LPVLEDSSSS--NLEFIXXXXXXXXXXXXXXXXXXXXXVSHRPAYL 260
LP+ S+S N+E V +RP YL
Sbjct: 809 DNLDETEHEHNSSTLPMTNSSNSDQPNIEI-----------NIPEIRRTSQRVKNRPGYL 857
Query: 261 NDFITNHVTDTAPCFHVASSVTSATHSYHHISPLFAPAYVSFLANVDSIQEPLSYSHARL 440
D+ H T A +SS S + ++ SF++ + SI EP SY A
Sbjct: 858 QDY---HCTLAASKVDQSSSTARYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAIN 914
Query: 441 DDNWVEAMSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKG 620
D W EA+ EL+AL+ TW+LT+LPP K+A+G +WV+KVK + DG+++RYKARLVAKG
Sbjct: 915 HDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKG 974
Query: 621 YHQIHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPE 800
+ QI G+DY D+FSPV ++ T+R + +A +W +HQLDIN AFLHG L EEVYM+PP
Sbjct: 975 FTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPPP 1034
Query: 801 GYLAAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXX 980
G + + P +VC L+KSLYGLKQASR+WN +L +GF QS D+ LF K N F
Sbjct: 1035 GLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFIA 1094
Query: 981 XXXXXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYI 1160
+GS+E++I +K LD F+IKDLG YFLG+E +RS+QG +CQRKY
Sbjct: 1095 ILVYVDDLIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKYA 1154
Query: 1161 LDILRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFAT 1340
L++L+DT ++ K STP+ +L H S+P +RRL+GRL+YL TRPD+AFA
Sbjct: 1155 LELLQDTGLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAV 1214
Query: 1341 QQLSQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKS 1520
+LSQF+ QP+ +H++AA VLRY+K P+ GLF+ S+ LT Y+++DW+TCPD+ +S
Sbjct: 1215 GKLSQFMHQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRS 1274
Query: 1521 LTGYCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPI 1700
++G+C F GN L+SWK+KKQ VSRSS+EAEY AL VCE QWL+ + D QL PI
Sbjct: 1275 ISGFCFFLGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPI 1334
Query: 1701 DLWCDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKAL 1880
L+CDNQ+A++I ANPVFHERTKH++IDCH VR++ + GF+ L +TS QLADI TK L
Sbjct: 1335 SLFCDNQSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADILTKPL 1394
Query: 1881 GCQAFQRILSKFGLQDF 1931
+ FQ + K GL +F
Sbjct: 1395 LPKMFQDFVCKLGLSNF 1411
Score = 455 bits (1171), Expect = e-132
Identities = 269/796 (33%), Positives = 417/796 (52%), Gaps = 2/796 (0%)
Frame = +2
Query: 2357 PLYLNGSDHPGASLVTVSLTGNNYLSWKRAMLIALGAKTKLGFINGKIPEPEASSPTYDY 2536
P +L +++P SLV+ L +NYLSW ++ML+ LG K KL FI+G + P +
Sbjct: 14 PYFLPSNENPSISLVSAPLNDHNYLSWSQSMLLVLGTKNKLAFIDGSLARPVTAGVDQTA 73
Query: 2537 WKKVDCMLISWILNSLSKDILDAFLYARNAKELWDDIAERFGGCNGPLLYQLKRDIANVT 2716
W + + ++ISWI+ SL ++ + ++ A ++W+D+ +R+ + + +L +I ++
Sbjct: 74 WDRCNKLVISWIVQSLDTSLIPSVIWMPTASQIWNDLKKRYYQGDAFRISELLEEIYSLK 133
Query: 2717 QGTLSTTVYFTKLKRLWDELSFLDPLPPCTCETNKQLIDRDMKDKLIQFLMGLNDSHEHV 2896
QG +S T YFT L+ LW EL P+P CTC T + +I+FL GLN+ + +V
Sbjct: 134 QGNMSITHYFTTLQGLWQELDHFCPIPSCTCFTT---------ECVIRFLKGLNEQYSNV 184
Query: 2897 RSQILIMDPLPNINKAYSMLLTVEKQRTAQLEVSELIENSAMMSKVQGPIRDTPNRMGNN 3076
RSQ+++MDPLP++ K +SM+L E++ + L S NN
Sbjct: 185 RSQVMLMDPLPSVQKVFSMILQQEREFHGTNDNQVLAVTS------------------NN 226
Query: 3077 SGPPHRNRGFHRMTKEEKAKLICEHCKGPGHDVNTCFKLHGIPDWFKKLKDQRGRQGVAN 3256
++ + K+ K +C HC GH V++C+K HG P L+ + GR + N
Sbjct: 227 ERNNYKGSKTFKRNKDYNTK-VCSHCGRIGHLVDSCYKKHGPP-----LQHKHGR--IVN 278
Query: 3257 LVDSTGAQNNKLGASTEGNP--HPNMSNMIQQEVAKYLAGRMMGGSNLPSESNLSFAHFA 3430
S ++ S N NM E + L + + S S A +
Sbjct: 279 QYQSVSDEDTDDDQSVHSQRVVSHNSGNMFTPEQHQALLALLQQSGSTSSHSVNQLAGPS 338
Query: 3431 DFAGKHAPIDVHFGLSMLGNLDNGSWILDTGASRHMCSNPTLLSHITPISPHATICLPDG 3610
+ P + LS + ++ WI+DTGA+ H+C N I P I LP+G
Sbjct: 339 ILSSPKPPGMI---LSFPYSHNSDCWIIDTGATDHVCKNINFFQSYRRIKP-ILIQLPNG 394
Query: 3611 TTKSVTHSGHIRLSPHLHLHDVFVVPSFKYTLLSVPQLTQQANLKCIFFPTHCVFQDLHS 3790
+ S SG + LS +L DV +P+F + L+SV +L + + F + C Q HS
Sbjct: 395 SQVSTCVSGTVLLSKTCYLTDVLFIPNFHFNLISVSKLAKTLSCTLTFSDSDCQIQANHS 454
Query: 3791 DKILGTGKLHGRLYILQQTPVLSTPVSLAFNSDSSFPTQVLCNGSFELWHKKLGHASISL 3970
+++G +L LY + +P ++ + S F T +LWH +LGH S
Sbjct: 455 MRMIGAAELRAGLYAMVSSP----ESNVVHHCTSHFFTY-----QSDLWHLRLGHLSHDK 505
Query: 3971 LNHIGFLKSLCTAETTKMLQGCDVCHQSKQHRLPFSTSSIQTSDVFELLHIDVWGLYRAP 4150
L+ + S + K+ C++CH +K RLPF S ++ +VF+L+H+D+WG
Sbjct: 506 LSALK--GSYPEIQCNKISLPCEICHLAKHKRLPFPDSLTKSENVFDLIHVDIWGPLSVA 563
Query: 4151 NITNTPFLLNIVDDFSRATWTFLMSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEF 4330
+I + L IVDD SR TW F M +K T LL F++ V FQ+++K IRTDNG+EF
Sbjct: 564 SIFGHKYFLTIVDDKSRFTWIFFMKNKFETKLLLQNFVSFVQTQFQQNIKTIRTDNGSEF 623
Query: 4331 LSLECQTLFSAHGIIHQKTCTYTPQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSIL 4510
L + ++ GI+HQ +C TPQQNGVVE KH+H+L +ARALMFQSN W Y+I
Sbjct: 624 L---LKDWYAKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIG 680
Query: 4511 TATFLTNRLPVSVLHWKTPFEVLYSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCI 4690
A L NRLP L +P+ VLYS+ P++S LK FGCL +A+ + ++ K R+ KC+
Sbjct: 681 HAVHLINRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCM 740
Query: 4691 FLGYLPNQKGYRLFDL 4738
FLGY KG+ ++DL
Sbjct: 741 FLGYSSGTKGFIMYDL 756
>gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 810
Score = 547 bits (1410), Expect = e-172
Identities = 293/657 (44%), Positives = 398/657 (60%), Gaps = 17/657 (2%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCPIQTPNLSDTPLPYLPVLEDSSSSNLEFIXXX 182
KG+ LF+L ++ +L+SR IF + FP Y+ V ++ S+SN+ I
Sbjct: 163 KGFVLFNLHSKSILLSRHAIFHQTVFP--------------YINVFDNQSNSNIVPISND 208
Query: 183 XXXXXXXXXXXXXXXXXXVSHRPAYLNDFITNHVTDTAPCFHVASSVTSATHSYHHISPL 362
+ ++ NH D P ++ S+ T I+
Sbjct: 209 NIFQPYDFFPSYSDHLTNNPNSIENASNNFENHTQD--PPIEMSQSIPIETGQIQPITTR 266
Query: 363 FA------PAYVSFL-----ANVDSIQEPLSYSH------ARLDDNWVEAMSKELEALEF 491
+ P Y+ + DS L H A D W +AM EL+ALE
Sbjct: 267 VSLRSKSRPGYLDQYHCYNTVSSDSTSNSLYPMHLYIFKEASTKDCWKQAMIAELDALER 326
Query: 492 NGTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVA 671
N TW L LPPGKK IG KWVY+ K +GT++RYKARLVAKG+ Q G+DYF++FSPVA
Sbjct: 327 NRTWSLVTLPPGKKLIGCKWVYRTKHKANGTVERYKARLVAKGFTQTEGIDYFETFSPVA 386
Query: 672 KLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPGQVCLLKKSL 851
K+ ++RFL+ +A+ H+W +HQLDI+NAFLHG L+EEVYMRPP+G VC L+KSL
Sbjct: 387 KITSIRFLLALASSHNWFIHQLDIDNAFLHGDLDEEVYMRPPQGLRLPSSKLVCKLEKSL 446
Query: 852 YGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESD 1031
YGLKQASR WN L G++QS DH LF+ +S +G++ ++
Sbjct: 447 YGLKQASRNWNQKLTSELTLMGYKQSFADHSLFVNFTGSSITILLIYVDDIVLSGNDMTE 506
Query: 1032 IAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTKMMDCKVVST 1211
I +K +L F IKDLG K+FLG+E+ARS++G L QRKY L+++ +T ++ CK T
Sbjct: 507 IKKVKAHLHNKFHIKDLGSLKFFLGLEVARSKKGILLNQRKYCLELIDETGLLGCKPAPT 566
Query: 1212 PLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEA 1391
P P +KL G L +P FRRLIGRLLYL TRPDI+F+ QQLSQFV +P H +A
Sbjct: 567 PADPAMKLHVDHGDLLHDPTVFRRLIGRLLYLTNTRPDISFSVQQLSQFVSKPREPHMQA 626
Query: 1392 ALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFYGNCLISWKT 1571
AL ++RYLKG P +GLFYS + + A+S++DW+TC T +S+TGYCVF GN LISWK+
Sbjct: 627 ALRIVRYLKGAPGLGLFYSSTNPLKIQAFSDSDWATCATTRRSVTGYCVFIGNSLISWKS 686
Query: 1572 KKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPV 1751
KKQ+TVSRSS+EAEY AL + CELQWL Y+ + + +PTP + D+Q+A+ I NP
Sbjct: 687 KKQSTVSRSSSEAEYRALASLTCELQWLKYLCDSMHIKIPTPFATFSDSQSAIQISKNPT 746
Query: 1752 FHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRILSKFGL 1922
FHERTKH+++DCH++R K ++G L L HV S +QLAD FTKAL + F +SK GL
Sbjct: 747 FHERTKHIEVDCHLIRIKIQEGLLHLIHVLSANQLADAFTKALFPKPFHTAISKLGL 803
Score = 158 bits (400), Expect = 7e-36
Identities = 72/173 (41%), Positives = 110/173 (63%)
Frame = +2
Query: 4220 MSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQKTCTYT 4399
M +K+ +L F+ + N F +K +R+DNG EF+ + F+ GI+H+ +C T
Sbjct: 1 MKNKTEVRSILQNFILLTENQFSCKLKKLRSDNGKEFI---LKDFFNTKGILHETSCVET 57
Query: 4400 PQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKTPFEVL 4579
PQQNG+VE KH+H+L++ R+L+FQS P W ++I A + NRLP L+ K+PFE++
Sbjct: 58 PQQNGIVERKHQHILNVCRSLLFQSKVPKSFWSFAIKHAVHIINRLPTPFLNNKSPFEMI 117
Query: 4580 YSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQKGYRLFDL 4738
+++ PN LK FGCL Y + + ++K RAHKCIFLG+ KG+ LF+L
Sbjct: 118 FNQKPNLHDLKTFGCLAYVSTLSGGRNKLEPRAHKCIFLGFKTGTKGFVLFNL 170
>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1376
Score = 561 bits (1446), Expect = e-171
Identities = 306/681 (44%), Positives = 412/681 (60%), Gaps = 27/681 (3%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCPIQTPNLSDTPL-------------PYLPVLE 143
KGY +DL T + ISR+V F E+ FP T + S+ P+ + +L
Sbjct: 702 KGYITYDLHTRAITISRNVSFYENHFPLLQSTSSTSNIPVVSPISFGIHSPSHDLISILP 761
Query: 144 D-------------SSSSNLEFIXXXXXXXXXXXXXXXXXXXXXVSHRPAYLNDFITNHV 284
D +S ++ + + P+YL D+ + +
Sbjct: 762 DPHQHNVTSPNPATTSHDSISLAPYSTTADSLPPNSSPLRRSTRLRNPPSYLQDY-HHSL 820
Query: 285 TDTAPCFHVASSVTSATH-SYHHISPLFAPAYVSFLANVDSIQEPLSYSHARLDDNWVEA 461
T T+ H + SY +S F +F++++ ++ EP SY+ A D W++A
Sbjct: 821 TSTSTNLHPGMLYPIEKYISYSRLSNDFQ----AFVSSISAVSEPHSYAEAAKHDCWLKA 876
Query: 462 MSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGV 641
M ELEAL+ N TW LT LPP K+A+G +W+YK+K N DG+I+RYKARLVAKGY Q+ G+
Sbjct: 877 MHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGSIERYKARLVAKGYTQVEGL 936
Query: 642 DYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKP 821
DY +FSPVAKL TVR L+ +A W L QLD+NNAFLHG LNEEVYM P G
Sbjct: 937 DYLATFSPVAKLTTVRLLLALAAVFDWHLKQLDVNNAFLHGDLNEEVYMTLPLGMRPEYS 996
Query: 822 GQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXX 1001
QVC L+KSLYGLKQASR+W LI +G+ QS+ DH LF+K ++S
Sbjct: 997 NQVCKLQKSLYGLKQASRQWFAKLSSFLIHHGYHQSASDHSLFMKFSSSSTTALLIYVDD 1056
Query: 1002 XXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDT 1181
G+N S+I + LD F IKDLG KYFLG+E+AR++ G +L QRKY+LDIL D
Sbjct: 1057 IVLAGNNLSEIQLITGLLDVAFKIKDLGNLKYFLGLEVARNKSGIHLSQRKYVLDILSDC 1116
Query: 1182 KMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFV 1361
MM + VSTP+ +L +GTPL++P +RRL+GRL+YL TRPDI++ LSQF+
Sbjct: 1117 GMMASRPVSTPMDYTSRLSASSGTPLADPSSYRRLLGRLIYLTTTRPDISYVVHHLSQFM 1176
Query: 1362 GQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVF 1541
P T+H +A +LRYLK P GLF+ +++ L A+S++DW+ C DT +S+TG+ V+
Sbjct: 1177 SAPSTAHSQAIFRILRYLKQAPGSGLFFPTNSSLHLKAFSDSDWAGCLDTRRSITGFSVY 1236
Query: 1542 YGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQ 1721
G+ LISW++KKQ TVSRSS+EAEY AL TT ELQWL Y+ DL + + P L+CDNQ
Sbjct: 1237 LGDSLISWRSKKQPTVSRSSSEAEYRALATTTSELQWLTYLLHDLHVPVHQPALLYCDNQ 1296
Query: 1722 AAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQR 1901
+A+HI AN VFHERTKH+DIDCH+VR K + G L L V S HQLADIFTK+L F
Sbjct: 1297 SALHIAANQVFHERTKHIDIDCHLVREKLQSGLLKLLPVASPHQLADIFTKSLSPSMFTA 1356
Query: 1902 ILSKFGLQDFLRSPT*GGGAE 1964
+ SK G+ + L S GG E
Sbjct: 1357 LYSKLGMLN-LYSQLEGGSHE 1376
Score = 419 bits (1078), Expect = e-119
Identities = 257/792 (32%), Positives = 394/792 (49%), Gaps = 10/792 (1%)
Frame = +2
Query: 2393 SLVTVSLTGNNYLSWKRAMLIALGAKTKLGFINGKIPEPEASSPTYDYWKKVDCMLISWI 2572
+LV+ SL NY SW R+ML AL AK K+ F++G P+P +S Y WK+ + M++SW+
Sbjct: 2 ALVSPSLDSTNYHSWSRSMLTALSAKNKVEFVDGSAPQPPSSDRIYSAWKRCNNMVVSWL 61
Query: 2573 LNSLSKDILDAFLYARNAKELWDDIAERFGGCNGPLLYQLKRDIANVTQGTLSTTVYFTK 2752
+ S+S I + L+ +A+E+W D+ R+ + + L+ + +++ QG LS T YFT+
Sbjct: 62 VPSVSFSIRQSILWMDSAEEIWRDLKSRYSQGDLLRISALQLEASSIKQGDLSVTDYFTQ 121
Query: 2753 LKRLWDELSFLDPLP------PCTCETNKQLIDRDMKDKLIQFLMGLNDSHEHVRSQILI 2914
L+ +WDEL P P C C+ + L R ++D+ +QFL GLND + +VRS +L+
Sbjct: 122 LRIIWDELENFRPDPICVCIVKCICKVSSILAQRKLEDQAMQFLRGLNDQYANVRSHVLL 181
Query: 2915 MDPLPNINKAYSMLLTVEKQRTAQLEVSEL---IENSAMMSKVQGPIRDTPNRMGNNSGP 3085
MDPLP INK +S + E+Q ++E+ N+A+M+
Sbjct: 182 MDPLPPINKIFSYVAQQERQFAVSDSLAEVKNGFANAAIMNST----------------- 224
Query: 3086 PHRNRGFHRMTKEEKAKLICEHCKGPGHDVNTCFKLHGIPDWFKKLKDQRGRQGVANLVD 3265
C C GH +TC++ HG PD K RG+
Sbjct: 225 -------------------CNFCGRNGHTESTCYRKHGFPDKNGKSSSNRGKA-----CS 260
Query: 3266 STGAQNNKLGASTEGNPHPNMSNMIQQEVAKYLAGRMMGGSNLPSESNLSFAHFADFAGK 3445
G + + + + P + A +N + ++ H
Sbjct: 261 HCGKNGHTVDTCYKKHGFPPGHRFSNNKSAS---------ANSSVQPHICTTH------- 304
Query: 3446 HAPIDVHFGLSMLGNLDNGSWILDTGASRHMCSNPTLLSHITPISPHATICLPDGTTKSV 3625
+ D WI+D+GA+ H+ + + I P + LP G +
Sbjct: 305 --------------SFDTTPWIIDSGATDHVTCSLQFFTSYKLIEP-VIVNLPTGHKVTA 349
Query: 3626 THSGHIRLSPHLHLHDVFVVPSFKYTLLSVPQLTQQANLKCIFFPTHCVFQDLHSDKILG 3805
THSG + S + L DV + SF + L+SV +L + + F C QD+ + +G
Sbjct: 350 THSGTVYFSSNFQLTDVLYISSFAFNLISVSKLVSTTSYQITFTNNVCFIQDIRTKMKIG 409
Query: 3806 TGKLHGRLYILQQTPVLSTPVSLAFNSDSSFPTQVLCNGSFELWHKKLGHASISLLNHIG 3985
+ + G LY Q P P + +S P + +LWH +LGH S + L++
Sbjct: 410 SVDVRGGLY--QLIPHHFKPPFI--HSTIIHPKCDVI--PIDLWHFRLGHLSNTRLHN-- 461
Query: 3986 FLKSLCTAETTKMLQGCDVCHQSKQHRLPFSTSSIQTSDVFELLHIDVWGLYRA-PNITN 4162
++ L T C++CH +KQ +L FS+S S F LLH+D+WG Y +I
Sbjct: 462 -MQQLYPCLTINKDFTCNICHYAKQRKLSFSSSHSTASRPFSLLHMDIWGPYSCISSIHG 520
Query: 4163 TPFLLNIVDDFSRATWTFLMSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLE 4342
F IVDD + TW FLM +KS T ++ F+ ++ N F ++ I+TDNG EFL
Sbjct: 521 HKFFFTIVDDNTHFTWIFLMINKSETRMHISNFINLIENQFNTRIQTIQTDNGAEFLM-- 578
Query: 4343 CQTLFSAHGIIHQKTCTYTPQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSILTATF 4522
Q F++ GI+HQ TC TPQQNGVVE KH+HLL++ AL+F S P W Y++L AT+
Sbjct: 579 -QNFFNSKGIVHQTTCIETPQQNGVVERKHQHLLNVTHALLFHSKLPYCFWSYALLHATY 637
Query: 4523 LTNRLPVSVLHWKTPFEVLYSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCIFLGY 4702
L NR+ +L KTPF+ LY +T + + L+ FGCLCY + ++ K RAH C+FLG+
Sbjct: 638 LINRITTPLLDNKTPFQKLYGQTCDITELRVFGCLCYVSTSTANRKKLDPRAHPCVFLGF 697
Query: 4703 LPNQKGYRLFDL 4738
P KGY +DL
Sbjct: 698 SPTTKGYITYDL 709
>gb|AJY78065.1| putative polyprotein [Glycine max]
Length = 523
Score = 531 bits (1369), Expect = e-170
Identities = 267/515 (51%), Positives = 340/515 (66%)
Frame = +3
Query: 411 EPLSYSHARLDDNWVEAMSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTID 590
EP SY A ++WV AM +EL AL N TW + ELPP K IG KWVYKVK +G I+
Sbjct: 8 EPQSYEEASKHEHWVTAMKEELNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIE 67
Query: 591 RYKARLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTL 770
RYKARLVAKGY+Q+ G+DYF++FSPVAK+ TVR L+ VA +W LHQLD+NNAFLHG L
Sbjct: 68 RYKARLVAKGYNQVEGIDYFETFSPVAKITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDL 127
Query: 771 NEEVYMRPPEGYLAAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLF 950
E+VYM+ P+G AKP VC L+KSLYGLKQASR+W L+ G+ QS D+ LF
Sbjct: 128 QEDVYMKIPDGVTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLF 187
Query: 951 LKGDNTSFXXXXXXXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQ 1130
+F G + + +K+ LD F IK+LG KYFLG+E+A S
Sbjct: 188 TLTKGNTFTALLVYVDDIILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRL 247
Query: 1131 GTYLCQRKYILDILRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLN 1310
G + QRKY LD+L+D+ ++ CK STPL IKL AGTP ++ +RR++G+LLYLN
Sbjct: 248 GITISQRKYCLDLLKDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLN 307
Query: 1311 FTRPDIAFATQQLSQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNAD 1490
TRPDIAFATQQLSQF+ P H+ AA VLRYLK P G+F+S ++ L YS+AD
Sbjct: 308 TTRPDIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDAD 367
Query: 1491 WSTCPDTCKSLTGYCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQ 1670
W+ C D+ KS++GYC F G L+SW+ KKQ TVSRSS+EAEY AL + CELQWL Y+
Sbjct: 368 WAGCMDSRKSISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFA 427
Query: 1671 DLQLSLPTPIDLWCDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRH 1850
DL++ L L+CDNQ+A+HI +NPVFHERTKHL+IDCH+VR K G L L V++
Sbjct: 428 DLRVQLTRTPTLYCDNQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSD 487
Query: 1851 QLADIFTKALGCQAFQRILSKFGLQDFLRSPT*GG 1955
Q+AD TKAL F +SK + + GG
Sbjct: 488 QVADFLTKALAPPKFHDFVSKLSMINIYHDKLEGG 522
>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
Length = 635
Score = 535 bits (1378), Expect = e-170
Identities = 274/571 (47%), Positives = 368/571 (64%), Gaps = 2/571 (0%)
Frame = +3
Query: 249 PAYLNDFITNHVTDTAPCFHVASSVTSATH--SYHHISPLFAPAYVSFLANVDSIQEPLS 422
P+YL D+I N T++ + + + ++ S+ H+S +S ++++ EP S
Sbjct: 47 PSYLQDYICNPSTNSVSSANKSCILYPLSNFISHKHLSNSQHTFALSLVSHI----EPKS 102
Query: 423 YSHARLDDNWVEAMSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKA 602
Y+ A D W +AM EL AL+ GTW + ++P K IG KWV ++K N DG+I+RYKA
Sbjct: 103 YAEAIKSDCWKQAMQLELNALDQTGTWTVVDIPSQVKPIGCKWVCRIKYNDDGSIERYKA 162
Query: 603 RLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEV 782
RLVAKGY+QI G+DYFD+FSPVAK+ VR +I +A+ +HW LHQLD+NNAFLHG L E V
Sbjct: 163 RLVAKGYNQIEGLDYFDTFSPVAKITIVRLVIALASINHWFLHQLDVNNAFLHGDLQENV 222
Query: 783 YMRPPEGYLAAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGD 962
Y + P G KP QVC L KSLYGLKQASR+W LI+ ++Q++ D LF K
Sbjct: 223 YKKIPPGLSTFKPNQVCKLSKSLYGLKQASRKWYEKLTTLLISNDYKQAASDASLFTKLT 282
Query: 963 NTSFXXXXXXXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYL 1142
+ +F G++ ++ +K+ L F IKDLG KYFLG+E+A S G L
Sbjct: 283 SETFTIILVYVDDIILAGNSLTEFHIIKNALHQAFKIKDLGILKYFLGLEVAHSHSGISL 342
Query: 1143 CQRKYILDILRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRP 1322
CQRKY LD+L D+ ++ K VSTP P IKL + + +RRLIGRL+YLN TRP
Sbjct: 343 CQRKYCLDLLNDSGLLGSKPVSTPSDPSIKLHNDTSLLFPDISAYRRLIGRLIYLNTTRP 402
Query: 1323 DIAFATQQLSQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTC 1502
DI F TQQLSQF+ +P +H+ A L VL+YLKG P G+F+ ++ + Y++ADW C
Sbjct: 403 DITFITQQLSQFLSKPTQTHYHATLRVLKYLKGSPGKGIFFPRASGLHIQGYTDADWVGC 462
Query: 1503 PDTCKSLTGYCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQL 1682
DT +S++G+C F G LI W+TKKQ TVS+SS+EAEY A+ + CE+QWL Y+ +DLQ+
Sbjct: 463 KDTRRSISGHCFFLGQSLICWRTKKQPTVSKSSSEAEYRAMASATCEMQWLLYLLRDLQV 522
Query: 1683 SLPTPIDLWCDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLAD 1862
L+CDNQ+AMHI +NPVFHERTKHL+IDCHIVR K + G L VT+ Q+ D
Sbjct: 523 QCVQLPVLYCDNQSAMHIASNPVFHERTKHLEIDCHIVREKLQAGIFKLLPVTTHDQIGD 582
Query: 1863 IFTKALGCQAFQRILSKFGLQDFLRSPT*GG 1955
FTKAL Q F +LSK G+ D PT GG
Sbjct: 583 SFTKALYLQPFSLLLSKLGMLDIYHPPTCGG 613
>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1115
Score = 551 bits (1419), Expect = e-170
Identities = 300/670 (44%), Positives = 408/670 (60%), Gaps = 13/670 (1%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCP--------IQTPNLSDTPLPYL---PVLEDS 149
KG+ + D+ T ++L+SR+VIF E FP I P+L+ +P P + P +
Sbjct: 449 KGFVILDINTREILVSRNVIFHETSFPFHTSAPTSPFITQPSLTISPNPDILTTPPTSPN 508
Query: 150 SSSNLEFIXXXXXXXXXXXXXXXXXXXXXVSHRPAYLNDFITNHVTDTAPCFHVASSVTS 329
+S + +S P + I H ++P ++
Sbjct: 509 DTSPSQNPNPDASASPSSPAAPTSPFHDSISSYPTSTDFDIVPHHRSSSP------AIPP 562
Query: 330 ATHSYHHISPLFAPAYVS-FLANVDSIQEPLSYSHARLDDNWVEAMSKELEALEFNGTWL 506
S I P P Y+S + + S++ S + + + W EAM+ EL+ALE N TW
Sbjct: 563 PRRSERDIHP---PPYLSEYQYKLPSLKSVQSSTRSIQNPCWREAMTCELKALELNHTWD 619
Query: 507 LTELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVAKLVTV 686
+ E P + IG KWV+K+K P+G+I+RYKARLVAKGY QI G+DYF++FSPV K+ TV
Sbjct: 620 VVETPSHVRPIGCKWVFKIKRLPNGSIERYKARLVAKGYSQIEGIDYFETFSPVVKMTTV 679
Query: 687 RFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPGQVCLLKKSLYGLKQ 866
R ++ +A+ + W + QLD++NAFLHG L E+VYM P+G C L+KSLYGLKQ
Sbjct: 680 RVVLALASINQWHIQQLDVSNAFLHGDLLEDVYMELPQGLTGYSSSHSCKLRKSLYGLKQ 739
Query: 867 ASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESDIAHLK 1046
+SR+W L++ G++Q+ DH LF K ++F TG++ ++I +K
Sbjct: 740 SSRKWYEKLSNLLLSNGYKQAHSDHSLFTKRHGSAFTALLIYVDDIVLTGNSAAEITRIK 799
Query: 1047 HYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTKMMDCKVVSTPLPPG 1226
H L F +KDLG KYFLG+E+A S +G LCQRKY LD+L D+ M+ CK STP+
Sbjct: 800 HILHSNFHVKDLGQLKYFLGIEVAHSSKGISLCQRKYCLDLLSDSGMLGCKPSSTPMDST 859
Query: 1227 IKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEAALHVL 1406
++L A L +P +RRL+GRL+YL TRPDIAF+TQQLSQF+ +P +H AA+ VL
Sbjct: 860 LRLHDDASGYLDDPLPYRRLVGRLVYLTNTRPDIAFSTQQLSQFMSKPTNAHHAAAMRVL 919
Query: 1407 RYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFYGNCLISWKTKKQTT 1586
RYLK CP GLF+ ++ +S+ADW+TC + +S+TGYC F GN LISWKTKKQTT
Sbjct: 920 RYLKSCPGTGLFFPRVCPIQVSGFSDADWATCVASRRSITGYCFFIGNALISWKTKKQTT 979
Query: 1587 VSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPVFHERT 1766
VSRSS+EAEY AL + CELQW+ Y+ +DL +SL L+CDN +A+HI ANPVFHERT
Sbjct: 980 VSRSSSEAEYRALASATCELQWIIYLLRDLHISLSQISLLYCDNTSALHIAANPVFHERT 1039
Query: 1767 KHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRILSKFGLQDFLRSPT 1946
KHLDIDCHIVR K + G + L V S QLADIFTKAL AF+ LSK LQ+ P
Sbjct: 1040 KHLDIDCHIVREKTQAGLMKLLPVPSAKQLADIFTKALPPHAFKLNLSKLQLQNIFAPPA 1099
Query: 1947 *GG-GAEEYS 1973
GG AE Y+
Sbjct: 1100 CGGLTAEPYN 1109
Score = 295 bits (755), Expect = 7e-79
Identities = 174/461 (37%), Positives = 256/461 (55%), Gaps = 8/461 (1%)
Frame = +2
Query: 3380 GGSNLPSESNLSFAHFADFAGKHAPIDVHFGLSMLGNLDNGS----WILDTGASRHMCSN 3547
G S PS +NLS + F ++ L+N S WI+D+GA+ H+ ++
Sbjct: 13 GSSETPSRANLSHSTPNQSHDSGLGSRSIFSINTTHTLNNLSHTTPWIIDSGATDHITTS 72
Query: 3548 PTLLSHITPISPHATICLPDGTTKSVTHSGHIRLSPHLHLHDVFVVPSFKYTLLSVPQLT 3727
L + I P I LP+G+ SG I+LSP +HDV VP+F + LLS+P+L
Sbjct: 73 IDLFFKYSEIKP-LNINLPNGSIVQAHFSGSIQLSPDFVIHDVLFVPNFSFNLLSLPKLL 131
Query: 3728 QQANLKCIFFPTH----CVFQDLHSDKILGTGKLHGRLYILQQTPVLSTPVSLAFNSDSS 3895
A + IF C QD+++ K++G+ L L+ L + S ++
Sbjct: 132 LTAPCRVIFSNQFSNILCQIQDMNTLKMIGSANLKEGLFHLD--------IGKERRSSTN 183
Query: 3896 FPTQVLCNGSFELWHKKLGHASISLLNHIGFLKSLCTAETTKMLQGCDVCHQSKQHRLPF 4075
T N S LWH +LGH S + LN + + + ++ CDVCH +KQ +L +
Sbjct: 184 NATATPINNS-NLWHFRLGHLSSNRLNVLNQQFPFISKHSNEV---CDVCHFAKQKKLSY 239
Query: 4076 STSSIQTSDVFELLHIDVWGLYRAPNITNTPFLLNIVDDFSRATWTFLMSHKSHTPKLLA 4255
S SS + S +F+L+H+D+WG + +I + L I+DDFSR TW L+ KS +
Sbjct: 240 SPSSSRVSKIFDLIHMDIWGPFSKASIHGHKYFLTILDDFSRYTWVVLLKSKSEVKTHVH 299
Query: 4256 QFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQKTCTYTPQQNGVVECKHR 4435
F+ +V N ++ VK IR+DNG EF + F++ GIIHQ +C YTPQQNG VE KH+
Sbjct: 300 NFINLVENQYETKVKCIRSDNGPEFF---LRDFFNSKGIIHQTSCVYTPQQNGRVERKHQ 356
Query: 4436 HLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKTPFEVLYSKTPNYSGLKP 4615
H+L++ARALMFQS PS+ W Y+I A FL NR+P ++ KTPFE+L P++S LK
Sbjct: 357 HILNVARALMFQSKLPSNFWSYAIKHAIFLINRVPSPIISHKTPFELLNKIPPDFSMLKV 416
Query: 4616 FGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQKGYRLFDL 4738
FGCLCYA + + KF R+ K IF+G+ KG+ + D+
Sbjct: 417 FGCLCYA-STHNQRHKFEPRSRKGIFMGFQNGTKGFVILDI 456
>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1002
Score = 547 bits (1409), Expect = e-169
Identities = 295/652 (45%), Positives = 402/652 (61%), Gaps = 10/652 (1%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFP----CPIQTPNLSDTPLPYLPVLEDSSSSNLEF 170
KG L+DL + + +SR V + E FP P+ P P+ D+ + L
Sbjct: 347 KGSILYDLNSRETFLSRHVEYFEHIFPFLPTSPLDLTQTISLPRHQPPLPIDTDPTPLST 406
Query: 171 IXXXXXXXXXXXXXXXXXXXXXVSHR-PAYLNDFITNHVTDTAPCFHVASSVTSATHSYH 347
+ P+YL+D+ +H T H + +++ +S H
Sbjct: 407 NTTPTSSPVSVVPPPPFVRKSTRPRKLPSYLHDY--HHTLLTT---HNSPTISQPLYSIH 461
Query: 348 -HIS-PLFAPAYVSFLANVDSIQEPLSYSHARLDDNWVEAMSKELEALEFNGTWLLTELP 521
HIS +P+ +F ++ SI+EP SY A D++W A+ EL ALE N TW+LT LP
Sbjct: 462 NHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLP 521
Query: 522 PGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIV 701
P K+ +G KWV+K+K N DGTI+R+KARLVAKGY Q +DY D+FSPV K+ TVR L+
Sbjct: 522 PNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKMTTVRTLLA 581
Query: 702 VATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPGQ---VCLLKKSLYGLKQAS 872
VAT +W +HQLD+N FLHG L+EEVYM PP G L P Q VC L KSLYGLKQAS
Sbjct: 582 VATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPG-LTVSPHQSNCVCKLVKSLYGLKQAS 640
Query: 873 REWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESDIAHLKHY 1052
R+WN LI GF+QS D+ LF K F G++ ++I ++K
Sbjct: 641 RQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVDDLVLAGNDPTEINYIKSL 700
Query: 1053 LDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTKMMDCKVVSTPLPPGIK 1232
LD FTIKDLG KYFLG+E+ARS G L QRKY LD++ DT ++ K +P+ +K
Sbjct: 701 LDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIEDTGLLASKPCKSPMDHSVK 760
Query: 1233 LIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEAALHVLRY 1412
L GTPL++P Q+RRL+GRL+YL TR DI+F+ LSQF+ QP H++AAL +L+Y
Sbjct: 761 LHKTVGTPLTDPTQYRRLLGRLIYLTNTRADISFSVNHLSQFMDQPTDVHYQAALRILKY 820
Query: 1413 LKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFYGNCLISWKTKKQTTVS 1592
+K P GLF+ S+ +L YS++DW++C DT +S+TG+ F G LISWK+KKQ TVS
Sbjct: 821 VKNAPGKGLFFPSSSDLTLKGYSDSDWASCSDTRRSVTGFSFFLGPALISWKSKKQATVS 880
Query: 1593 RSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPVFHERTKH 1772
+SSAEAEY AL + CE QWL Y+ D L PI L+CDNQ+A+HI +NPVFHERTK+
Sbjct: 881 KSSAEAEYRALAQSTCEAQWLSYLLHDFGLHSFHPIVLFCDNQSALHIASNPVFHERTKN 940
Query: 1773 LDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRILSKFGLQD 1928
+++DCHIVR K + G + L +++ QLAD+FTKAL + F++I+ K G+ D
Sbjct: 941 IELDCHIVREKLQVGLIHLLPISTADQLADVFTKALSLRPFEQIIFKLGMFD 992
Score = 271 bits (694), Expect = 1e-71
Identities = 144/368 (39%), Positives = 207/368 (56%)
Frame = +2
Query: 3635 GHIRLSPHLHLHDVFVVPSFKYTLLSVPQLTQQANLKCIFFPTHCVFQDLHSDKILGTGK 3814
G I S L DV +P F + L+SV +L +Q + F C QD S K++G K
Sbjct: 1 GSIFFSEDFFLADVLYIPEFNFNLVSVSRLIRQLGCRLTFSGDLCDIQDSQSMKMIGAAK 60
Query: 3815 LHGRLYILQQTPVLSTPVSLAFNSDSSFPTQVLCNGSFELWHKKLGHASISLLNHIGFLK 3994
+ LY+L P V L +S ++F + +LWH +LGH + L
Sbjct: 61 HNMGLYVLDWKP----KVCLYLHSVNNFHSY-----DNDLWHIRLGHLAHEKLQ--AMKS 109
Query: 3995 SLCTAETTKMLQGCDVCHQSKQHRLPFSTSSIQTSDVFELLHIDVWGLYRAPNITNTPFL 4174
+ + K C+VC+ +KQ +LPFS S + ++F+LLH+D+WG +I F
Sbjct: 110 NFPFIDCKKNKDPCNVCYLAKQRQLPFSHSVTKADEIFDLLHVDIWGPTTPASIFGHKFF 169
Query: 4175 LNIVDDFSRATWTFLMSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTL 4354
L IVDD SR TW + M HKS L+ F+ ++ N F K VK +R+DNG EFL +
Sbjct: 170 LTIVDDKSRHTWVYFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFL---LKNF 226
Query: 4355 FSAHGIIHQKTCTYTPQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSILTATFLTNR 4534
+ GI+HQ +C TPQQNG+VE KH+H++ +ARAL+ QSN P W Y++ A FL NR
Sbjct: 227 YHEKGILHQTSCVETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINR 286
Query: 4535 LPVSVLHWKTPFEVLYSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQ 4714
P S L K P+E++Y+ P+ +G+K FGCL YAT + ++ KF R +C+FLG+ P
Sbjct: 287 QPSSFLENKIPYEIIYNALPDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGFKPQV 346
Query: 4715 KGYRLFDL 4738
KG L+DL
Sbjct: 347 KGSILYDL 354
>ref|XP_009338880.1| PREDICTED: uncharacterized protein LOC103931184 [Pyrus x
bretschneideri]
Length = 1143
Score = 549 bits (1415), Expect = e-169
Identities = 277/568 (48%), Positives = 365/568 (64%), Gaps = 2/568 (0%)
Frame = +3
Query: 249 PAYLNDFITNHVTDTAPCFHVASSVTSATHSYHHISPL--FAPAYVSFLANVDSIQEPLS 422
PAYLND++ +H AP +SSV+S H H + A+ SF+ NV EP S
Sbjct: 578 PAYLNDYVAHHAALLAPGI-ASSSVSSTRHPLHRYVSYASLSSAHQSFVHNVSHQMEPTS 636
Query: 423 YSHARLDDNWVEAMSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKA 602
Y AR D WV AM+ EL+ALE N TW + L G +AIG KWV+K+K + DGTI+RYKA
Sbjct: 637 YDQARHDPQWVAAMNNELQALEENQTWSMVPLLAGHRAIGCKWVFKIKYHSDGTIERYKA 696
Query: 603 RLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEV 782
RLVAKG+ Q G+DY ++F+PVAKL+TVR L+ VA HW HQ+D+ NAFLHG L+EEV
Sbjct: 697 RLVAKGFTQREGIDYKETFAPVAKLITVRCLLTVAAVRHWPFHQMDVQNAFLHGELHEEV 756
Query: 783 YMRPPEGYLAAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGD 962
YM PP GY VC LKKSLYGLKQASR W F ++ GF QS D+ LF K
Sbjct: 757 YMLPPPGYRRQGERVVCRLKKSLYGLKQASRSWFQKFSSAIHDIGFIQSRADYSLFTKVY 816
Query: 963 NTSFXXXXXXXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYL 1142
+S TG+N+ I LK +L F IKDLG KYFLGVE+ARS+ G +
Sbjct: 817 GSSITIVLLYVDDMVITGNNDGAINDLKQFLSRCFRIKDLGPLKYFLGVEVARSKAGIAI 876
Query: 1143 CQRKYILDILRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRP 1322
QRKY LDIL + ++ K P+ P + L+ L +P Q+R+++G+L+YL TRP
Sbjct: 877 SQRKYTLDILEEAGLLGAKPSKVPMEPDLVLLPTGSDLLKDPTQYRQMVGKLIYLTITRP 936
Query: 1323 DIAFATQQLSQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTC 1502
+I +A LSQF+ +P H +AA +LRYLK P GL +S + +LT Y +ADW+ C
Sbjct: 937 EITYAVNTLSQFMQEPRRHHLDAAHRLLRYLKNAPGQGLLFSSQSKLNLTGYCDADWARC 996
Query: 1503 PDTCKSLTGYCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQL 1682
P T +S+TGYC+F GN LISWK+KKQ TV+RSSAEAEY ++ CEL WL Y+ +DLQ+
Sbjct: 997 PITRRSVTGYCIFLGNSLISWKSKKQVTVARSSAEAEYRSMAAATCELTWLRYLLKDLQI 1056
Query: 1683 SLPTPIDLWCDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLAD 1862
P P L+CDNQAA+HI NPVFHERTKH+++DCH +R + + G + ++ + Q+AD
Sbjct: 1057 IHPNPAKLFCDNQAALHIAVNPVFHERTKHIELDCHTIRERIQRGEIKTAYIHTGEQVAD 1116
Query: 1863 IFTKALGCQAFQRILSKFGLQDFLRSPT 1946
+FTK L AF +L K G+ D + +PT
Sbjct: 1117 MFTKPLRSPAFHLLLCKLGVLD-IHAPT 1143
Score = 192 bits (488), Expect = 6e-46
Identities = 136/436 (31%), Positives = 215/436 (49%), Gaps = 8/436 (1%)
Frame = +2
Query: 2354 DPLYLNGSDHPGASLVTVSLTGNNYLSWKRAMLIALGAKTKLGFINGKIPEPEASSPTYD 2533
DPL L+ SD P LV+ L G+NY W R+M IAL AK KLGFI+G I P + +
Sbjct: 15 DPLTLHHSDSPSLVLVSQLLDGHNYGQWSRSMRIALSAKNKLGFIDGSIKCPAITDAKFS 74
Query: 2534 YWKKVDCMLISWILNSLSKDILDAFLYARNAKELWDDIAERFGGCNGPLLYQLKRDIANV 2713
W++ + M++SWI S+ +I + LY ++A W D+ +RF N +YQ++++I
Sbjct: 75 IWQRCNDMVLSWIWQSVQGNIARSILYCKSASAAWKDLEDRFSQGNDSRIYQIRQEIVEH 134
Query: 2714 TQGTLSTTVYFTKLKRLWDEL-SFLDPLPPCTCETNKQLIDRDMKDKLIQFLMGLNDSHE 2890
QG LS + Y+T+LK LWDEL S+ +P+ C CE +K + R+ K+K++QFLMGLN+++
Sbjct: 135 RQGQLSISDYYTQLKALWDELASYYEPI-TCDCEGSKTRVAREEKEKVMQFLMGLNETYS 193
Query: 2891 HVRSQILIMDPLPNINKAYSMLLTVEKQRTAQLEVSELIENSAMMSKVQGPIRDTPNRMG 3070
+R IL+M+PLP+ + + ++L Q Q++V+ E +A + R T + G
Sbjct: 194 TIRGSILMMNPLPDTRRVHGLVL----QHERQIDVANHREPAAHAMQTH---RSTTPKGG 246
Query: 3071 NNSGPPHRNRGFHRMTKEEKAKLICEHCKGPGHDVNTCFKLHGIPDWFKKLKDQRGRQGV 3250
+ G + + C +C G H V C+ L G P+ K G+ +
Sbjct: 247 SVPG-----------SSSSRKASKCSYCDG-SHSVERCYFLIGFPEGHK----WHGKHVL 290
Query: 3251 ANLVDSTGAQNNKLGASTEGNPHPNMSNMIQQEVAKYLAGRMMGGSNLPSESNLSFAHFA 3430
NK T N + S+ I E K A G + E + FA
Sbjct: 291 ---------PRNKRPNPTAHNVEASPSHAIHPEATK--ATSSHGPTFTTEEYHQLFALLR 339
Query: 3431 DFAGKHAPIDVHFGL-SMLGNLDNGS------WILDTGASRHMCSNPTLLSHITPISPHA 3589
K P+ G+ + N+ WI+D+GAS H+ +P L+H + +
Sbjct: 340 SGNSKITPLANATGIVTPTCNMTEHDLHSTLYWIIDSGASDHISHSP--LTHKQIAAEND 397
Query: 3590 TICLPDGTTKSVTHSG 3637
+ LP+G T + G
Sbjct: 398 FVVLPNGGTADIKSIG 413
>gb|KOM46937.1| hypothetical protein LR48_Vigan07g064100 [Vigna angularis]
Length = 763
Score = 536 bits (1380), Expect = e-168
Identities = 276/570 (48%), Positives = 363/570 (63%), Gaps = 8/570 (1%)
Frame = +3
Query: 237 VSHRPAYLNDFITNHVTDTAPCFHVASSVTSATHSYHHISPL--------FAPAYVSFLA 392
V P YLND++ H + S +++ P+ ++ +
Sbjct: 198 VRRTPEYLNDYV-----------HQVNQSLSMKNNFKTPYPISDLLSCDSLTEKHLKYTM 246
Query: 393 NVDSIQEPLSYSHARLDDNWVEAMSKELEALEFNGTWLLTELPPGKKAIGSKWVYKVKMN 572
+ + EP SY+ A+ W EAM +E++AL+ N T LT+LPPGKK IG +WVYK K N
Sbjct: 247 TITANDEPRSYNEAKGMCEWEEAMQREIKALQDNNTRYLTQLPPGKKPIGCRWVYKTKYN 306
Query: 573 PDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVAKLVTVRFLIVVATQHHWGLHQLDINNA 752
DGTI+RYKARLVAKGY Q G+DY D+FSPVAKL TVR LIV+A ++W LHQLD+ NA
Sbjct: 307 VDGTIERYKARLVAKGYTQQEGIDYLDTFSPVAKLTTVRLLIVLAASNNWFLHQLDVENA 366
Query: 753 FLHGTLNEEVYMRPPEGYLAAKPGQVCLLKKSLYGLKQASREWNTAFCGSLIAYGFRQSS 932
FL G LNEEVYM PP G K GQVC L KSLYGLKQASR+W LI+ + QS
Sbjct: 367 FLRGDLNEEVYMEPPPGLNTHKEGQVCRLTKSLYGLKQASRQWFEKLSSFLISVNYIQSK 426
Query: 933 HDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESDIAHLKHYLDGLFTIKDLGYAKYFLGVE 1112
DH LF+KG +T F G++ ++I ++K L F IK+LG KYFLG+E
Sbjct: 427 SDHSLFIKGTSTDFTALLVYVDDIILAGNSMTEINNVKTLLHNKFQIKNLGELKYFLGLE 486
Query: 1113 IARSEQGTYLCQRKYILDILRDTKMMDCKVVSTPLPPGIKLIHGAGTPLSNPDQFRRLIG 1292
+ARS++G +LCQRKY LDIL++T M+ CK STP ++ + L + +RRLIG
Sbjct: 487 VARSKKGIHLCQRKYALDILKETGMLGCKPSSTPFLSDTSSLYRTDSYLDDLGSYRRLIG 546
Query: 1293 RLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEAALHVLRYLKGCPSVGLFYSVSAACSLT 1472
+LLYL TRPD+ F+ LSQF+ P H+ A HVLRY K PS GLF+ + L
Sbjct: 547 KLLYLTNTRPDLCFSINLLSQFMKSPTNHHYRAVQHVLRYTKSKPSEGLFFGDDSPVHLK 606
Query: 1473 AYSNADWSTCPDTCKSLTGYCVFYGNCLISWKTKKQTTVSRSSAEAEYCALGTTVCELQW 1652
A+S++DW+TCP+T +S TG+CVF G+ LISWK+KKQ+TVSRSS +AEY AL T+CE+QW
Sbjct: 607 AFSDSDWATCPNTRRSTTGFCVFLGSSLISWKSKKQSTVSRSSTKAEYRALAATLCEIQW 666
Query: 1653 LYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPVFHERTKHLDIDCHIVRNKFKDGFLLLK 1832
++Y+ QDLQ+ L+CDN++A HI N FHERTKH+++DCH+VR K ++ L L
Sbjct: 667 IHYLQQDLQVQEAETPALYCDNKSARHIAHNQSFHERTKHIELDCHVVREKIQENLLRLL 726
Query: 1833 HVTSRHQLADIFTKALGCQAFQRILSKFGL 1922
V S QLADIFTK F+ I+ K GL
Sbjct: 727 PVRSNEQLADIFTKFPHRVRFKSIVPKLGL 756
Score = 146 bits (369), Expect = 3e-32
Identities = 68/157 (43%), Positives = 99/157 (63%)
Frame = +2
Query: 4220 MSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQKTCTYT 4399
M++K T LL F+ + N F K +K IR+DNG EF C L+ +GI HQK+C T
Sbjct: 1 MNNKGQTRDLLQNFIVKIKNQFDKVIKTIRSDNGPEF---NCVNLYDLYGIDHQKSCVET 57
Query: 4400 PQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKTPFEVL 4579
P+QN VVE KH+H+L++ R+L+FQSN P+ W Y + +L NRL +L+ KTP++++
Sbjct: 58 PEQNSVVERKHQHILNVTRSLLFQSNMPNAYWSYDVSHVVYLINRLSSPILNNKTPYDLV 117
Query: 4580 YSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCI 4690
Y+ P Y LK FGCLC+A+ + ++K R H I
Sbjct: 118 YNVPPTYLNLKVFGCLCFASTLENSRNKLDPRGHNPI 154
>ref|XP_010692573.1| PREDICTED: uncharacterized protein LOC104905670 [Beta vulgaris subsp.
vulgaris]
Length = 864
Score = 539 bits (1388), Expect = e-168
Identities = 318/839 (37%), Positives = 457/839 (54%), Gaps = 43/839 (5%)
Frame = +2
Query: 2354 DPLYLNGSDHPGASLVTVSLTGNNYLSWKRAMLIALGAKTKLGFINGKIPEPEASSPTYD 2533
DP ++ D+P +SLV+ + +G+N++ W R + AL AK K FI +P P + Y
Sbjct: 34 DPFFIANLDNPTSSLVSATFSGSNFMRWSRNVKRALIAKNKECFITRSLPMPAENHRDYS 93
Query: 2534 YWKKVDCMLISWILNSLSKDILDAFLYARNAKELWDDIAERFGGCNGPLLYQLKRDIANV 2713
W + D M++SWIL+S++ +I D F Y N+ ELW ++ ERFG NGPL+YQLK++I +
Sbjct: 94 RWTRADYMVMSWILSSMNPNIADDFSYVSNSAELWQELCERFGQSNGPLVYQLKKEIEGL 153
Query: 2714 TQGTLSTTVYFTKLKRLWDELSFLDPLPPC--------TCETNKQLIDRDMKDKLIQFLM 2869
Q L+ Y+ KLK+LWDEL L P C +C+ K + D + +DKL+QFL+
Sbjct: 154 RQENLTIIAYYGKLKKLWDELKALRSFPVCNCGALARCSCQFLKNISDLEAEDKLMQFLL 213
Query: 2870 GLNDSHEHVRSQILIMDPLPNINKAYSMLLTVEKQRTAQLEVSELIENSAMMSK--VQGP 3043
GLN + + IL M+P+P INKA+S+ +EKQ+ E+ E+SAM ++ QG
Sbjct: 214 GLNSGFDGTITNILSMEPMPTINKAFSITQQIEKQKEIS-GAMEITESSAMAAQRFSQGV 272
Query: 3044 IRDTPNRMGNNSGPPHRNRGFHRMTKEEKAKLICEHCKGPGHDVNTCFKLHGIPDWFKKL 3223
I + G + R R K+EK C+HCKG GH + CF++ G P+W+ +
Sbjct: 273 I---------SGGQRFQAR---RDWKKEKQDKKCDHCKGKGHTRDQCFQIIGYPEWYNAI 320
Query: 3224 KDQRGRQG----------VANL-------VDSTGAQNNKLGASTEGNPHPNMSNMIQQEV 3352
K +G G AN+ ++S + + + G M N I QEV
Sbjct: 321 KATKGNLGGFGNGGNKKFAANVHITQEEGMESPLDIDCNMDGISGGQMDQGMMNSICQEV 380
Query: 3353 AKYLAGRMMGGSNLPSESNLSFAHFADFAGKHAPIDVHFGLSMLGNL---DNGSWILDTG 3523
K + G+ S SN S FA FAG +S NL + SWI+D+G
Sbjct: 381 MKIMKGKQQ-----QSASNSS--SFASFAGNVV-------ISSCSNLLKEEICSWIVDSG 426
Query: 3524 ASRHMCSNPTLLSHITPISPHATICLPDGTTKSVTHSGHIRLSPHLHLHDVFVVPSFKYT 3703
A HM + L + + + LPDGT + V +G + L L +HDV +V FKY
Sbjct: 427 ACDHMVFDERHLINKRRLDTEIKVGLPDGTCRYVKLTGSVVLDKRLVIHDVLLVEGFKYN 486
Query: 3704 LLSVPQLTQQANLKCIFFPTHCVFQDLHSDKILGTGKLHGRLYILQQTPVL---STPVSL 3874
LLSV +L ++A + F C FQD +S +ILG+GK G LY + + S S
Sbjct: 487 LLSVSKLAEKAGILVRFTKDPCYFQDQYSLQILGSGKKQGGLYYYFSSNGVQNNSGMTSA 546
Query: 3875 AFN--SDSSFPTQVLCN--------GSFELWHKKLGHASISLLNHIGFLKSLCTAETTKM 4024
N + S P ++ + EL H++LGH S+S + HI K E
Sbjct: 547 CHNVVASCSLPNKIAVGRINKESGVDTLELMHRRLGHVSLSKMQHIDDCKCQGLTE---- 602
Query: 4025 LQGCDVCHQSKQHRLPFSTSSIQTSDVFELLHIDVWGLYRAPNITNTPFLLNIVDDFSRA 4204
C VC SK H+LPF S+ + F+L+HID+WG YR + + L +VDD +R
Sbjct: 603 -YNCGVCLHSKHHKLPFPVSNSRAECCFDLIHIDLWGPYRVHALNGARYFLTLVDDHNRV 661
Query: 4205 TWTFLMSHKSHTPKLLAQFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQK 4384
TWT+L+ +K K + FL+MV F K +K IR+DNGTE + EC LF + GI+ Q+
Sbjct: 662 TWTYLLHNKLQVAKTICDFLSMVDTQFGKKIKQIRSDNGTEIIKEECLNLFLSKGILMQR 721
Query: 4385 TCTYTPQQNGVVECKHRHLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKT 4564
+ Y QQNG VE KHRHLL+++RAL FQ+N W + TAT L N+LP VL WK+
Sbjct: 722 SAPYAHQQNGRVERKHRHLLEVSRALRFQANLSKKFWGECLQTATHLINKLPTKVLSWKS 781
Query: 4565 PFEVLYSKTPNYSGLKPFGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQKGYRLFDLT 4741
P+EV++++ P+Y+ L+ FGCLCYA V +DKF +R KCIF+GY QK YRL+DLT
Sbjct: 782 PYEVMFNQKPDYTNLRCFGCLCYAYIVHIKRDKFDSRTRKCIFIGYPYGQKAYRLYDLT 840
>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1445
Score = 554 bits (1427), Expect = e-167
Identities = 297/664 (44%), Positives = 406/664 (61%), Gaps = 16/664 (2%)
Frame = +3
Query: 3 KGYRLFDLTTEKVLISRDVIFVEDQFPCP-----------IQTPNLSDTP---LPYLPVL 140
KGY L++L + +SR+VIF E FP I T + +D L + VL
Sbjct: 792 KGYVLYNLHSRFFSLSRNVIFHETVFPYSDFHKFSSNSDAILTESTNDFAHYELYPITVL 851
Query: 141 EDSSSSNLEFIXXXXXXXXXXXXXXXXXXXXXVSHRPAYLNDFITNHVTDTAPCFHVASS 320
E +++ RP YLN + C+ SS
Sbjct: 852 ETTNTHTPSEQLQQPLTEEMQDIPVQPRVSTRQKFRPNYLNQY---------HCYSATSS 902
Query: 321 VTSATHSYHHISPL--FAPAYVSFLANVDSIQEPLSYSHARLDDNWVEAMSKELEALEFN 494
++ + H + Y +F ++ + EP +Y+ A D W +AM EL+AL N
Sbjct: 903 NSACLYPLHSYLSYNKCSSNYTAFCLSISAHVEPSNYAQAITQDCWKQAMMTELDALNRN 962
Query: 495 GTWLLTELPPGKKAIGSKWVYKVKMNPDGTIDRYKARLVAKGYHQIHGVDYFDSFSPVAK 674
TW L LPPG+K IG KWVY++K DG++DR+KARLVAKG+ Q G+DYF++FSPVAK
Sbjct: 963 RTWSLVSLPPGRKLIGCKWVYRIKYKADGSVDRHKARLVAKGFTQTEGIDYFETFSPVAK 1022
Query: 675 LVTVRFLIVVATQHHWGLHQLDINNAFLHGTLNEEVYMRPPEGYLAAKPGQVCLLKKSLY 854
L TVRFL+ +A+ ++W LHQLD++NAFLHG L EEVYMRPP+G VC L+KSLY
Sbjct: 1023 LTTVRFLLALASTNNWFLHQLDVDNAFLHGDLEEEVYMRPPQGLQLPDSKLVCKLEKSLY 1082
Query: 855 GLKQASREWNTAFCGSLIAYGFRQSSHDHCLFLKGDNTSFXXXXXXXXXXXXTGSNESDI 1034
GLKQASR WN L+ G++QSS DH LF+K +S +G+N S+I
Sbjct: 1083 GLKQASRNWNQKLNSELLHLGYKQSSADHSLFIKKQGSSITILLVYVDDVVLSGNNFSEI 1142
Query: 1035 AHLKHYLDGLFTIKDLGYAKYFLGVEIARSEQGTYLCQRKYILDILRDTKMMDCKVVSTP 1214
+K +L F IKDLG K+FLG+E+ARS++G L QRKY L+++ ++ ++ K TP
Sbjct: 1143 QIVKQHLHQKFQIKDLGPLKFFLGLEVARSKKGIILNQRKYCLELIDESGLLGSKPAPTP 1202
Query: 1215 LPPGIKLIHGAGTPLSNPDQFRRLIGRLLYLNFTRPDIAFATQQLSQFVGQPHTSHWEAA 1394
P IKL G+ L++P FRRLIGRLLYL TRPDI+F+ QQLSQFV QP H +AA
Sbjct: 1203 ADPAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDISFSVQQLSQFVSQPREPHLQAA 1262
Query: 1395 LHVLRYLKGCPSVGLFYSVSAACSLTAYSNADWSTCPDTCKSLTGYCVFYGNCLISWKTK 1574
L ++RYLKG P +GLFY + A+S++DW+TC T KS+TGYCVF G L+SWK+K
Sbjct: 1263 LRIVRYLKGAPGLGLFYPAENHLRIQAFSDSDWATCSTTRKSVTGYCVFLGKSLVSWKSK 1322
Query: 1575 KQTTVSRSSAEAEYCALGTTVCELQWLYYIAQDLQLSLPTPIDLWCDNQAAMHIVANPVF 1754
KQ+TVSRSS+EAEY AL + CELQWL +++ L + +P P ++ D+Q+A+ I NP F
Sbjct: 1323 KQSTVSRSSSEAEYRALASLTCELQWLKFLSDSLFVKIPAPFSVFSDSQSAIQIAKNPTF 1382
Query: 1755 HERTKHLDIDCHIVRNKFKDGFLLLKHVTSRHQLADIFTKALGCQAFQRILSKFGLQDFL 1934
HERTKH+++DCH++R K ++ L L HV S +QLAD FTK+L + F +SK GL + +
Sbjct: 1383 HERTKHIEVDCHLIRIKLQEELLHLIHVPSANQLADAFTKSLYPKLFLHAISKLGLSN-I 1441
Query: 1935 RSPT 1946
PT
Sbjct: 1442 HGPT 1445
Score = 427 bits (1097), Expect = e-122
Identities = 259/821 (31%), Positives = 414/821 (50%), Gaps = 22/821 (2%)
Frame = +2
Query: 2342 IKEGDPLYLNGSDHPGASLVTVSLTGNNYLSWKRAMLIALGAKTKLGFINGKIPEPEASS 2521
+ +PL+L+ ++P LVT L+ NN+ WK ML+AL K K F+ G + P S
Sbjct: 14 VNPANPLFLHPGENPALILVTPLLSDNNFPQWKHDMLVALETKNKDQFVLGTLTCPNLSD 73
Query: 2522 PTYDYWKKVDCMLISWILNSLSKDILDAFLYARNAKELWDDIAERFGGCNGPLLYQLKRD 2701
P + W + + M++SW+ +S++ I + ++ +A E+W D+ +RF + + L+ +
Sbjct: 74 PLHKAWCRCNKMVMSWLAHSMTPSIRQSVMWIESASEIWRDLCDRFSHGDKFRIADLQEE 133
Query: 2702 IANVTQGTLSTTVYFTKLKRLWDELSFLDPLPPCTCET-------NKQLIDRDMKDKLIQ 2860
+ N QG L+ + Y+T+L+ LW ELS + C+C +K +RD D +I+
Sbjct: 134 LQNCKQGELTVSQYYTRLRILWKELSIYRTVLACSCPVACSCGIFSKIQKERD-DDCVIK 192
Query: 2861 FLMGLNDSHEHVRSQILIMDPLPNINKAYSMLLTVEKQRTAQLEVSELIENSAMMSKVQG 3040
FL GLND VRSQ+++M+P+P + + +S++L E++ + E++A+ +
Sbjct: 193 FLRGLNDEFSQVRSQVMLMEPMPGLTRTFSLVLQQEREFGGPVPPIPQ-ESAALATFNDD 251
Query: 3041 PIRDTPNRMG---NNSGPPHRNRGFHRMTKEEKAKLICEHCKGPGHDVNTCFKLHGIPDW 3211
R+ + G N G RG ++ C CK H ++TCF+++G P
Sbjct: 252 SARNNSSTRGGFSNTRGGGRSGRG----NNTGRSTRFCTKCKKTNHTIDTCFQIYGFPPG 307
Query: 3212 FKKLKDQRGRQGVANLVDSTGAQNN-----KLGASTEGNPHPNMSNMIQQEVAKYLAGRM 3376
++ G+ S + NN L ++T N +Y A
Sbjct: 308 YRT----NGKSTSTTSNTSKSSVNNFDSTTSLVSATSAKDDVTSQNTFNFSKDQYQALLG 363
Query: 3377 MGGSNLPSESNLSFAHFADFAGKHAPIDVHFGLSMLGNLDNGSWILDTGASRHMCSNPTL 3556
+ + +++ AH + NL SWILD+GA+ H+C + +
Sbjct: 364 LLQQSQDPSPSVNSAHKCSVSTPGI------------NLFQSSWILDSGATDHICPSKSY 411
Query: 3557 LSHITPISPHATICLPDGTTKSVTHSGHIRLSPHLHLHDVFVVPSFKYTLLSVPQLTQQA 3736
S + PI P ++ LP+ + +SG I L +L L++ VP F L+S+P+L
Sbjct: 412 FSSLIPIKP-VSVKLPNNQSVFACYSGTIHLG-NLTLYNALYVPDFSVHLISIPKLVTTL 469
Query: 3737 NLKCIFFPTHCVFQDLHSDKILGTGKLHGRLYILQQTPVLSTPVSLAFNSDSSFPTQVLC 3916
N IF C+ H+ K++G K L+ L L SL F++ + T VL
Sbjct: 470 NCIVIFCEYDCIIVQRHTFKMIGAAKQQSGLFQL-----LQHNDSLGFSTTGNNCTTVLA 524
Query: 3917 -------NGSFELWHKKLGHASISLLNHIGFLKSLCTAETTKMLQGCDVCHQSKQHRLPF 4075
+ S +WH KLGH S +L L S T+ ++ CD+C +KQ +LPF
Sbjct: 525 TTLNDNFSNSTSVWHAKLGHPSNKVLQT---LSSQYTSIKFPLVHVCDICSFAKQKKLPF 581
Query: 4076 STSSIQTSDVFELLHIDVWGLYRAPNITNTPFLLNIVDDFSRATWTFLMSHKSHTPKLLA 4255
S+ T+ FEL+H+D+WG +I + L +VDD+SR TW L+ K LL
Sbjct: 582 PDSTSITNFFFELIHVDIWGPLAISSIEGYKYFLTVVDDYSRFTWIHLLKSKQEVKSLLP 641
Query: 4256 QFLAMVHNHFQKSVKFIRTDNGTEFLSLECQTLFSAHGIIHQKTCTYTPQQNGVVECKHR 4435
F+ ++ N +K +R+DNG EF+ ++A GI+H+ +C TPQQNG+VE KH+
Sbjct: 642 NFIILIENQHDCKLKRLRSDNGKEFI---LTNFYNAKGILHETSCVETPQQNGIVERKHQ 698
Query: 4436 HLLDIARALMFQSNAPSHLWPYSILTATFLTNRLPVSVLHWKTPFEVLYSKTPNYSGLKP 4615
HLL++ RAL+FQS P W Y+I A + NRLP L K+PFE++Y P+ L+
Sbjct: 699 HLLNVCRALLFQSQIPKTFWSYAIKHAVHIINRLPTRFLKQKSPFEMIYHHKPDLHDLRV 758
Query: 4616 FGCLCYATNVFPHKDKFTTRAHKCIFLGYLPNQKGYRLFDL 4738
FGCL YA+ + + K RA KCIFLGY KGY L++L
Sbjct: 759 FGCLAYASTLAAGRTKLAPRASKCIFLGYKSGTKGYVLYNL 799