BLASTX nr result

ID: Rehmannia28_contig00018334 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00018334
         (309 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-...    59   2e-08
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-...    58   6e-08
ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214...    53   2e-06
ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240...    53   4e-06
ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240...    52   7e-06
ref|XP_010913227.1| PREDICTED: replication protein A 70 kDa DNA-...    51   7e-06
ref|XP_015963817.1| PREDICTED: uncharacterized protein LOC107487...    52   7e-06

>ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
           [Nicotiana sylvestris]
          Length = 302

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = -3

Query: 202 GSFWISATIFSFI--GDWWYLSCKKCPKKLTQVGDKFYCERCDKFSHSGNFRY 50
           G  WI AT+ + +   +W YL CKKC KK+ ++G+KF+C++CD+   S   RY
Sbjct: 226 GHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGNKFHCKKCDRLDSSATHRY 278


>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
           partial [Nicotiana sylvestris]
          Length = 244

 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = -3

Query: 202 GSFWISATIFSFI--GDWWYLSCKKCPKKLTQVGDKFYCERCDKFSHSGNFRY 50
           G  WI AT+ + +   +W YL CKKC KK+ ++G KF+C++CD+   S   RY
Sbjct: 19  GHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGSKFHCKKCDRLDSSVTHRY 71


>ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana
           sylvestris]
          Length = 213

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
 Frame = -3

Query: 205 VGSFWISATIFSFIGD--WWYLSCKKCPKKLTQVGDKFYCERCDK 77
           +G++W+ ATI     D  W YL+CK C KKL + G+KFYC++C++
Sbjct: 85  LGNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 129


>ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240911 isoform X1
           [Nicotiana sylvestris]
          Length = 282

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = -3

Query: 202 GSFWISATIFSFIGD--WWYLSCKKCPKKLTQVGDKFYCERCDKFSHSGNFRY*N*IFYL 29
           G++W+ ATI     D  W YL+CK C KKL + G+KFYC++C++   S   RY   +++L
Sbjct: 47  GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQI-QSVIHRYDYNLYFL 105

Query: 28  F 26
           +
Sbjct: 106 Y 106


>ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240911 isoform X2
           [Nicotiana sylvestris]
          Length = 278

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
 Frame = -3

Query: 202 GSFWISATIFSFIGD--WWYLSCKKCPKKLTQVGDKFYCERCDK 77
           G++W+ ATI     D  W YL+CK C KKL + G+KFYC++C++
Sbjct: 47  GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 90


>ref|XP_010913227.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
           [Elaeis guineensis]
          Length = 139

 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = -3

Query: 157 WWYLSCKKCPKKLTQVGDKFYCERCDKF 74
           W+Y  C++CPKKL Q G +F+CE+CDKF
Sbjct: 40  WYYNFCRRCPKKLEQAGGRFFCEKCDKF 67


>ref|XP_015963817.1| PREDICTED: uncharacterized protein LOC107487627 [Arachis
           duranensis]
          Length = 342

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = -3

Query: 199 SFWISATIFSF-IG--DWWYLSCKKCPKKLTQVGDKFYCERCDKFSHSGNFRY 50
           S WI ATI S  +G  DW+Y SCK CP+K+ +   ++YCE C K   +   RY
Sbjct: 246 STWILATIVSVDVGTRDWYYASCKNCPRKVVENKGRYYCEHCRKVGFNAPLRY 298


Top