BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00018301
         (428 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EJM81387.1| phage-related tail fiber protein [Pseudomonas sp....    95   5e-20
emb|CCG42195.1| hypothetical protein PHAMO_340068 [Phaeospirillu...    54   1e-14
ref|WP_056856177.1| phage tail protein [Pseudomonas sp. Root562]...    78   3e-14
ref|WP_008042271.1| tail fiber protein [Pseudomonas sp. GM67] gi...    78   4e-14
ref|WP_057711399.1| hypothetical protein [Pseudomonas sp. DSM 29...    70   1e-13
ref|WP_033735091.1| hypothetical protein, partial [Pseudomonas p...    67   3e-12
gb|AFO47234.1| tail fiber assembly protein, putative [Pseudomona...    67   3e-12
ref|WP_059395627.1| hypothetical protein [Pseudomonas putida]          66   6e-12
ref|WP_033735373.1| hypothetical protein, partial [Pseudomonas p...    65   2e-11
ref|WP_054913933.1| hypothetical protein [Pseudomonas sp. NBRC 1...    63   1e-10
ref|WP_054912378.1| hypothetical protein [Pseudomonas sp. NBRC 1...    62   1e-10
ref|WP_056842372.1| hypothetical protein [Pseudomonas sp. Leaf12...    61   6e-10
ref|WP_060476734.1| hypothetical protein [Pseudomonas monteilii]       60   1e-09
gb|KLD44558.1| hypothetical protein XB01_22195 [Escherichia coli]      64   2e-09
ref|WP_051723101.1| hypothetical protein [Cupriavidus metallidur...    64   2e-09
ref|WP_050519948.1| hypothetical protein [Pseudorhodobacter anta...    64   2e-09
gb|AHC33957.1| tail protein [Pseudomonas sp. TKP]                      63   6e-09
gb|KQC03902.1| hypothetical protein APR55_06665 [Methanolinea sp...    62   8e-09
ref|WP_060765909.1| hypothetical protein [Pseudomonas fluorescen...    62   9e-09
gb|EII33707.1| phage tail collar domain protein [Escherichia col...    62   9e-09

>gb|EJM81387.1| phage-related tail fiber protein [Pseudomonas sp. GM60]
          Length = 620

 Score = 94.7 bits (234), Expect = 5e-20
 Identities = 49/80 (61%), Positives = 54/80 (67%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EFLRG+D GRG + GR  GS + G +E H H AR  LG+  T GS  LVAF NTSVGS L
Sbjct: 382 EFLRGWDHGRGVDVGRVLGSGQLGQLEEHEHGARSGLGITGT-GSNALVAFANTSVGSSL 440

Query: 246 NTGAVGNYGGSETRPRNKTV 187
             GAV  YGGSETRPRN  V
Sbjct: 441 PAGAVSKYGGSETRPRNLAV 460


>emb|CCG42195.1| hypothetical protein PHAMO_340068 [Phaeospirillum molischianum DSM
           120]
          Length = 806

 Score = 53.9 bits (128), Expect(2) = 1e-14
 Identities = 24/45 (53%), Positives = 28/45 (62%)
 Frame = -2

Query: 139 RVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           R+VYQTD AG Y G   A P P   G +LIP GCVE+ PP+   G
Sbjct: 639 RIVYQTDRAGRYAGAVTADPSPLEPGAYLIPGGCVESAPPEILVG 683



 Score = 52.4 bits (124), Expect(2) = 1e-14
 Identities = 30/77 (38%), Positives = 42/77 (54%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EF+RG DDGRG + GR  GS++A  +  H H   Q +G     GS+ +    +  VG+ L
Sbjct: 540 EFVRGVDDGRGVDSGRVIGSWQADELRYHNHLVGQVIG---GRGSEQI----SPIVGTGL 592

Query: 246 NTGAVGNYGGSETRPRN 196
                   GG+E+RPRN
Sbjct: 593 RVNYTEYTGGNESRPRN 609


>ref|WP_056856177.1| phage tail protein [Pseudomonas sp. Root562]
           gi|945927399|gb|KQZ80637.1| phage tail protein
           [Pseudomonas sp. Root562]
          Length = 386

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 41/77 (53%), Positives = 49/77 (63%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EF+R  D+ RG +  R  GS +    ++H H AR  LGLN TSGS GLVA+ NT VGS L
Sbjct: 300 EFVRALDEARGVDVDRLPGSSKLSQNKAHEHGARSFLGLNGTSGSNGLVAYANTGVGSQL 359

Query: 246 NTGAVGNYGGSETRPRN 196
            TGAV   GGSE  PR+
Sbjct: 360 PTGAVSLEGGSEGYPRH 376


>ref|WP_008042271.1| tail fiber protein [Pseudomonas sp. GM67]
           gi|398196623|gb|EJM83624.1| Tail fiber protein
           [Pseudomonas sp. GM67]
          Length = 612

 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 41/77 (53%), Positives = 49/77 (63%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EFLR +D+ RG +  R  GS +    + H HAARQ LGLN +SGS  LVAF N  +G+PL
Sbjct: 526 EFLRIWDENRGIDVARVAGSSKLSQNKEHQHAARQGLGLNLSSGSNALVAFGNVVIGTPL 585

Query: 246 NTGAVGNYGGSETRPRN 196
             GAV   GGSE  PRN
Sbjct: 586 VNGAVSLEGGSEAYPRN 602


>ref|WP_057711399.1| hypothetical protein [Pseudomonas sp. DSM 29167]
          Length = 69

 Score = 70.5 bits (171), Expect = 1e-13
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -2

Query: 166 MEIKTQAGQRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPP 20
           M  K QAGQR+VYQTD+ G+ VG  +A PDPK+ G WLIP GCVE  PP
Sbjct: 1   MNTKLQAGQRLVYQTDQDGFLVGTTVADPDPKNPGVWLIPGGCVELAPP 49


>ref|WP_033735091.1| hypothetical protein, partial [Pseudomonas putida]
          Length = 63

 Score = 66.6 bits (161), Expect = 3e-12
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = -2

Query: 142 QRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           Q+ VYQ D+ G+Y+GEA+A  DP+  G+WL+PAGC ETKPP  TAG
Sbjct: 3   QKTVYQYDQKGFYLGEAVAERDPQVPGNWLLPAGCTETKPPIFTAG 48


>gb|AFO47234.1| tail fiber assembly protein, putative [Pseudomonas putida DOT-T1E]
          Length = 63

 Score = 66.6 bits (161), Expect = 3e-12
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -2

Query: 142 QRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           Q+ VYQ D  G+YVGEAIA  DP+  G+WL+PAGC ETKPP  TAG
Sbjct: 3   QKTVYQYDANGFYVGEAIAERDPQVPGNWLLPAGCTETKPPIFTAG 48


>ref|WP_059395627.1| hypothetical protein [Pseudomonas putida]
          Length = 63

 Score = 65.9 bits (159), Expect = 6e-12
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -2

Query: 142 QRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           Q+VV+Q D+ G+YVGEA A  DP+  G+WL+PAGC ETKPP  TAG
Sbjct: 3   QKVVFQYDQNGFYVGEATAERDPQVPGNWLLPAGCTETKPPIFTAG 48


>ref|WP_033735373.1| hypothetical protein, partial [Pseudomonas putida]
          Length = 63

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = -2

Query: 142 QRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           Q+ VYQ D+ G+Y+GE +A  DP+  G+WL+PAGC ETKPP  TAG
Sbjct: 3   QKTVYQYDQNGFYLGETVAERDPQVPGNWLLPAGCTETKPPIFTAG 48


>ref|WP_054913933.1| hypothetical protein [Pseudomonas sp. NBRC 111127]
          Length = 63

 Score = 62.8 bits (151), Expect = 1e-10
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = -2

Query: 142 QRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           Q++VYQ D  G+Y+GEA+A  DP+  G+WL+PA C ETKPP  TAG
Sbjct: 3   QKIVYQYDPNGFYLGEALAERDPQVPGNWLLPARCTETKPPIFTAG 48


>ref|WP_054912378.1| hypothetical protein [Pseudomonas sp. NBRC 111127]
          Length = 63

 Score = 62.4 bits (150), Expect = 1e-10
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = -2

Query: 142 QRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           Q++VYQ D  G+Y+GEA+A  DP+  G+WL+PA C ETKPP  TAG
Sbjct: 3   QKIVYQYDPNGFYLGEALAELDPQVPGNWLLPARCTETKPPIFTAG 48


>ref|WP_056842372.1| hypothetical protein [Pseudomonas sp. Leaf129]
           gi|945006945|gb|KQQ62984.1| hypothetical protein
           ASF66_01110 [Pseudomonas sp. Leaf129]
          Length = 63

 Score = 60.8 bits (146), Expect = 6e-10
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = -2

Query: 142 QRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           Q+ VYQ D  G+Y GEA+A  DP+  G+WL+PAG  ETKPP  TAG
Sbjct: 3   QKTVYQYDAEGWYQGEAVADADPQVPGNWLLPAGTTETKPPTFTAG 48


>ref|WP_060476734.1| hypothetical protein [Pseudomonas monteilii]
          Length = 63

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = -2

Query: 142 QRVVYQTDEAGYYVGEAIAYPDPKSHGHWLIPAGCVETKPPQNTAG 5
           Q+ VYQ D  G+Y+GE IA  DP+  G+WL+PA C ETKPP  TAG
Sbjct: 3   QKTVYQYDLNGFYLGETIAERDPQVPGNWLLPARCTETKPPIFTAG 48


>gb|KLD44558.1| hypothetical protein XB01_22195 [Escherichia coli]
          Length = 307

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EF+RG+DDGRG + GR   S +    +SH+H  R+  G N   G+ G       + GS +
Sbjct: 219 EFIRGWDDGRGIDSGRTLLSLQGDMFKSHSHYFREIWGANGPDGTGGPYIVGADTNGSRI 278

Query: 246 NTGAVGNY--GGSETRPRNKTVN 184
           N G +     GGSETRPRN T N
Sbjct: 279 NLGTIETSAPGGSETRPRNITFN 301


>ref|WP_051723101.1| hypothetical protein [Cupriavidus metallidurans]
          Length = 283

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EFLRG+D G+G +PGR FGS++  AV SH+H    ++ L + +G+    A+   + G+ L
Sbjct: 203 EFLRGWDHGKGVDPGRAFGSFQDQAVISHSHTIPASI-LYAMAGT----AYAGGTYGNTL 257

Query: 246 NTGAVGNYGGSETRPRN 196
           +    G  GGSETRPRN
Sbjct: 258 SNQGTGAAGGSETRPRN 274


>ref|WP_050519948.1| hypothetical protein [Pseudorhodobacter antarcticus]
          Length = 451

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EF+RG+DDGRG +PGR FGS +AG +++H H       +N+ +GS      + +   +  
Sbjct: 370 EFIRGWDDGRGVDPGRVFGSAQAGGLQAHTHTY-----VNAINGSYNGANADVSGGSNGS 424

Query: 246 NTGAV-GNYGGSETRPRN 196
           NT  V G+ GG ETRPRN
Sbjct: 425 NTNRVTGSTGGGETRPRN 442


>gb|AHC33957.1| tail protein [Pseudomonas sp. TKP]
          Length = 439

 Score = 62.8 bits (151), Expect = 6e-09
 Identities = 33/80 (41%), Positives = 44/80 (55%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EF RG+D GRG +PGR  GSY+A A +SH H      G++S S   G  +    +  +  
Sbjct: 239 EFFRGWDHGRGMDPGRAVGSYQADAFKSHTHTPPNQTGISSASVPTGAKSLGGNNYDTLY 298

Query: 246 NTGAVGNYGGSETRPRNKTV 187
           N G  G+   +ETRPRN  V
Sbjct: 299 NVGFTGD---TETRPRNLAV 315


>gb|KQC03902.1| hypothetical protein APR55_06665 [Methanolinea sp. SDB]
          Length = 283

 Score = 62.0 bits (149), Expect = 8e-09
 Identities = 33/80 (41%), Positives = 45/80 (56%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EF RGFDDGRG + GR FG ++A  +++H+H    ++  +S S + G       + G   
Sbjct: 203 EFFRGFDDGRGVDAGRVFGEWQADELKAHSHVISPSVTSDSGSSADG-----PDNNGDGA 257

Query: 246 NTGAVGNYGGSETRPRNKTV 187
           N  A    GG ETRPRN TV
Sbjct: 258 NISATQETGGVETRPRNITV 277


>ref|WP_060765909.1| hypothetical protein [Pseudomonas fluorescens]
           gi|984329402|gb|KWV78636.1| Phage Tail Collar Domain
           protein [Pseudomonas fluorescens]
          Length = 556

 Score = 62.4 bits (150), Expect = 9e-09
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHA-ARQALGLNSTSGSQGLVAFENTSVGSP 250
           EF RG DDGRG + GR  G+Y+A  +E+H HA      G    +G      F+   V   
Sbjct: 473 EFFRGLDDGRGVDVGRSLGTYQAPMLEAHGHALTSDGTGAAGAAGGNTTADFK---VDGS 529

Query: 249 LNTGAVGNYGGSETRPRN 196
           ++ G+ G  GG+ETRPRN
Sbjct: 530 VSVGSTGRTGGAETRPRN 547


>gb|EII33707.1| phage tail collar domain protein [Escherichia coli 4.0967]
          Length = 307

 Score = 62.0 bits (149), Expect = 9e-09
 Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = -3

Query: 426 EFLRGFDDGRGANPGRQFGSYEAGAVESHAHAARQALGLNSTSGSQGLVAFENTSVGSPL 247
           EF+RG+DDGRG + GR   S +    +SH+H  R+  G N   G+ G       + GS +
Sbjct: 219 EFIRGWDDGRGIDSGRTLLSLQGDMFKSHSHYFREIWGANGPDGTGGPYIVGADTNGSRI 278

Query: 246 NTGAVGNY--GGSETRPRNKTVN 184
           N G +     GGSETRPRN   N
Sbjct: 279 NLGTIETSAPGGSETRPRNIAFN 301