BLASTX nr result

ID: Rehmannia28_contig00017887 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00017887
         (490 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011091856.1| PREDICTED: sigma factor binding protein 2, c...   103   4e-25
ref|XP_012830636.1| PREDICTED: sigma factor binding protein 1, c...   100   2e-24
ref|XP_011086234.1| PREDICTED: uncharacterized protein LOC105168...    84   1e-17

>ref|XP_011091856.1| PREDICTED: sigma factor binding protein 2, chloroplastic-like
           [Sesamum indicum]
          Length = 157

 Score =  103 bits (256), Expect = 4e-25
 Identities = 64/108 (59%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
 Frame = +1

Query: 1   QQLTGKNSDISQYM-DDNNNYMTRDFHE----DHELLAKETSNDRYQYLSSSISPEDTPT 165
           Q+LTGKNSDIS YM + +N+Y   DF E     ++ LAK+TS+D+  +L SSIS EDTPT
Sbjct: 53  QKLTGKNSDISHYMAEPSNSYGFIDFCEIDCDANQSLAKQTSDDQC-HLLSSISAEDTPT 111

Query: 166 SSDSFLGPMDNVFMSQMKEQLFEGMFSSSDSFYHASQMDVLGSFDDSL 309
           SSDS   P+DNVF SQM EQ F G F SS+SF+ ASQ+DVLGS+D+ L
Sbjct: 112 SSDSLFEPIDNVFASQMDEQ-FSGFF-SSNSFFDASQLDVLGSYDELL 157


>ref|XP_012830636.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Erythranthe guttata] gi|604344125|gb|EYU42924.1|
           hypothetical protein MIMGU_mgv1a015864mg [Erythranthe
           guttata]
          Length = 142

 Score =  100 bits (250), Expect = 2e-24
 Identities = 63/105 (60%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
 Frame = +1

Query: 1   QQLTGKNSDISQYMDDNNNY---MTRDFHEDHELLAKETSNDRYQYLSSSISPED-TPTS 168
           QQLTGKNSDISQYM+++NN    + RDF E    LA +  NDR   + SSISP D T TS
Sbjct: 42  QQLTGKNSDISQYMEESNNINNEVFRDFCEIDRSLAND--NDR---MFSSISPSDETTTS 96

Query: 169 SDSFLGPMDNVFMSQMKEQLFEGMFSSSDSFYHASQMDVLGSFDD 303
           S+S LGP ++VF SQMKEQ FEG+F SSDSFY  SQ+D+LGS+++
Sbjct: 97  SESLLGPFEDVFTSQMKEQ-FEGIF-SSDSFYDPSQIDLLGSYEE 139


>ref|XP_011086234.1| PREDICTED: uncharacterized protein LOC105168022 [Sesamum indicum]
          Length = 152

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   QQLTGKNSDISQYMDDNNNYMTRDFHEDHELLAKETSNDRYQYLSSSISPEDTPTSSDSF 180
           QQLTGKNSDIS+Y +  +NY    FHE       + + +R Q LSS    + TPT+SDSF
Sbjct: 52  QQLTGKNSDISRYAE--SNYWADGFHEIGRDDVGDLTTER-QTLSSISLEDTTPTTSDSF 108

Query: 181 LGPMDNVFMS-QMKEQLFEGMFSSSDSFYHASQMDVLGSFDDSL 309
           LG M NVFM+  M+EQ F G+FSS       +Q+DVLGS+D+ L
Sbjct: 109 LGSMGNVFMTCSMEEQQFAGIFSSVSFSNSDNQLDVLGSYDELL 152


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