BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00017814
         (3171 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN88207.1| integrase core domain containing protein [Phaseol...   629   0.0  
emb|CAN63081.1| hypothetical protein VITISV_016842 [Vitis vinifera]   466   0.0  
emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]   478   0.0  
emb|CAN81716.1| hypothetical protein VITISV_032903 [Vitis vinifera]   527   0.0  
emb|CAN73101.1| hypothetical protein VITISV_042890 [Vitis vinifera]   615   0.0  
emb|CAN81715.1| hypothetical protein VITISV_032902 [Vitis vinifera]   613   0.0  
gb|KYP45104.1| Retrovirus-related Pol polyprotein from transposo...   596   0.0  
gb|KYP58900.1| Retrovirus-related Pol polyprotein from transposo...   594   0.0  
gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposo...   621   0.0  
gb|KOM38790.1| hypothetical protein LR48_Vigan03g217200 [Vigna a...   612   0.0  
gb|KOM52479.1| hypothetical protein LR48_Vigan09g113800 [Vigna a...   589   0.0  
gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposo...   619   0.0  
emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]   397   0.0  
emb|CAN70689.1| hypothetical protein VITISV_012155 [Vitis vinifera]   611   0.0  
gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposo...   614   0.0  
gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposo...   613   0.0  
emb|CAN61207.1| hypothetical protein VITISV_015446 [Vitis vinifera]   594   0.0  
emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]   603   0.0  
gb|KYP60096.1| Retrovirus-related Pol polyprotein from transposo...   577   0.0  
gb|KYP52900.1| Retrovirus-related Pol polyprotein from transposo...   586   0.0  

>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score =  629 bits (1623), Expect(4) = 0.0
 Identities = 303/534 (56%), Positives = 392/534 (73%)
 Frame = +1

Query: 1561 ISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWELVTAPPL 1740
            +S+  L   F T   SISS  +P S  +A  H  WR AM +EM+AL + GTWELV  P  
Sbjct: 854  LSYHRLSQPFYTCLSSISSVSIPKSVGDALAHPGWRQAMLDEMNALQNNGTWELVPLPSR 913

Query: 1741 ADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIRVLFSLA 1920
              +V CRWVF +K   DGTIDR KARLVAKG+TQ +G+DY +TFSP A+M S+R+  ++A
Sbjct: 914  KSVVGCRWVFAIKVGPDGTIDRLKARLVAKGYTQIFGLDYGDTFSPVAKMASVRLFIAMA 973

Query: 1921 VNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLKQSPRAW 2100
              Q WP+YQLDVKNAFL GDL E ++MEQPPG+VAQGE++ +VC+L+K++YGLKQSPRAW
Sbjct: 974  ALQQWPLYQLDVKNAFLNGDLQEEIYMEQPPGFVAQGESSGLVCRLRKSLYGLKQSPRAW 1033

Query: 2101 FDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXXSGSDIRGIDEVKKYLQQ 2280
            F KFSN++      + ++DH VF RHS+ G             +GSD  GI +VK++L Q
Sbjct: 1034 FGKFSNVVQQFGMTRSEADHSVFYRHSSVGCIYLVVYVDDIVLTGSDHHGISQVKQHLCQ 1093

Query: 2281 HFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMDINPSVWD 2460
            +F TKD+G+ +YFLGIE+A S +G+ + QRKYA D+L+E GL+ +K VDTPMD N  +  
Sbjct: 1094 NFQTKDLGKLRYFLGIEVAQSNTGIVISQRKYALDILEEIGLMNSKSVDTPMDPNVKLLP 1153

Query: 2461 DNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIRILRYIKK 2640
            + GE   D  KYRRLVGKL YLTVTRPDISFAV +VS+F++ P + HW+A IRIL+YIK 
Sbjct: 1154 NQGEPLSDPEKYRRLVGKLNYLTVTRPDISFAVSVVSQFLNSPCEDHWNAVIRILKYIKG 1213

Query: 2641 SPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQTTVARST 2820
            SPGKGL +  N H K   YSDAD+AGS +DRRSTSGYC  IG NL++W+SKKQ+ VARS+
Sbjct: 1214 SPGKGLLYGHNNHTKVVCYSDADWAGSPSDRRSTSGYCVSIGDNLISWKSKKQSVVARSS 1273

Query: 2821 AEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHERTKHIEV 3000
            AEAEYRAMA    E++WLK LL+EL F     + + CDNQAA+HI+SNPVFHERTKHIE+
Sbjct: 1274 AEAEYRAMASATCELIWLKQLLKELQFGDVTQMTLICDNQAALHISSNPVFHERTKHIEI 1333

Query: 3001 DCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAPA 3162
            DCHFIRE++++  I T F +S+NQ+A++FTK+L G R   +C+KL   D+YAPA
Sbjct: 1334 DCHFIREKIISGDIKTEFVNSNNQLADIFTKSLRGPRIDYICNKLGTYDLYAPA 1387



 Score =  360 bits (923), Expect(4) = 0.0
 Identities = 173/328 (52%), Positives = 222/328 (67%), Gaps = 2/328 (0%)
 Frame = +3

Query: 441  SPYQWHCRLGHPSPSSLKCLVPVQS--IDFQCESCEFGKHHRTSFPSRVDKRSSFAFELV 614
            SP   H RLGHPS + ++ LVP  S      CESC+FGKH R+SFPS V +R+S  F LV
Sbjct: 479  SPSLIHARLGHPSLAKMQQLVPSLSNVSSLSCESCQFGKHIRSSFPSSVSQRASSPFALV 538

Query: 615  HCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSIDL 794
            H D+WGPS+++S  GFQYF+ F+DDYSR TW++L+KNRSE+  + + F++EIK Q+ I +
Sbjct: 539  HSDIWGPSRIKSNLGFQYFVTFIDDYSRCTWVFLMKNRSELFSIFQLFYNEIKNQFGISI 598

Query: 795  RTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHMN 974
            R LR+DN  E+   +   F ASHGI+HQTSC YT QQNGVAERK+RH+++  RT+L H +
Sbjct: 599  RILRSDNGREYLSHSFKNFMASHGILHQTSCAYTPQQNGVAERKNRHLVETTRTILIHGD 658

Query: 975  VPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTPG 1154
            VP++ WGDA L+AC+LINRMPS+VL   IP S L P  PL  LPP++FG  CFVHNF+PG
Sbjct: 659  VPQHFWGDAVLSACYLINRMPSSVLDNKIPHSILFPHDPLHSLPPKVFGSTCFVHNFSPG 718

Query: 1155 LDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFSPNPVQPSXXXX 1334
            LDKLSP+S KC+ LG++R+QKGY+C  P   R +  ADVTF ES  YF   P  PS    
Sbjct: 719  LDKLSPRSHKCVFLGFTRSQKGYKCFSPSLNRYFISADVTFSESSLYFKSCP-SPSMSSS 777

Query: 1335 XXXXXXXXXXXXXXXXXXXKPLQVYTRR 1418
                                 LQVY+RR
Sbjct: 778  NQVNIPLVVPSAPKDSPPPPTLQVYSRR 805



 Score = 86.3 bits (212), Expect(4) = 0.0
 Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
 Frame = +2

Query: 5   SPSTIAASSTGAFVVSHGKS---WMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTY 175
           S +++A S T    ++H  S   W+LDSGAT HITGN+              V +A+G  
Sbjct: 334 STASVAHSGTSFAGLTHSTSLGPWVLDSGATDHITGNQSFFSSLSTTGYLPSVTMANGYK 393

Query: 176 SPITGTGVVRPTTNITLDNVLFAPKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKR 355
            P  G G +    ++++DNVL+ P  P +LLSIS+LT++ +C ++F       QD  + R
Sbjct: 394 VPSHGVGTINLFPSLSIDNVLYVPGSPFNLLSISRLTRSLDCVISFTKDSVSLQDRCSGR 453

Query: 356 MIGGGHERDGLFYL 397
           MIG G E  GL+ L
Sbjct: 454 MIGTGCESHGLYQL 467



 Score = 26.9 bits (58), Expect(4) = 0.0
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 1493 EIDLPIALRKGIRS 1534
            E DLPIA+RKGIRS
Sbjct: 830  EPDLPIAIRKGIRS 843


>emb|CAN63081.1| hypothetical protein VITISV_016842 [Vitis vinifera]
          Length = 1179

 Score =  466 bits (1199), Expect(4) = 0.0
 Identities = 232/454 (51%), Positives = 305/454 (67%), Gaps = 1/454 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L   + TF  +IS   +P S  E   H +WR AM +EM  L S GTW+L
Sbjct: 738  HPIYNFLSYHQLSSPYSTFVSAISFVSLPKSTPEVLSHPSWRQAMVDEMVVLHSNGTWDL 797

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  P     V CRWV+T+K   DG +DR KARLVAKG+TQ YG DY +TFSP A++  +R
Sbjct: 798  VVLPSGKSTVGCRWVYTVKVSPDGQVDRLKARLVAKGYTQVYGSDYGDTFSPVAKIAYVR 857

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +L S+A   SWP+YQLD+KN FL+GDL E            +GE+  +VC+L++++YGLK
Sbjct: 858  LLLSMAAMLSWPLYQLDIKNVFLHGDLAE------------EGESG-LVCRLRRSLYGLK 904

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXX-SGSDIRGIDE 2259
            QSPRAWF +FS+++      +  +DH VF  H+++G              +GSD  GI +
Sbjct: 905  QSPRAWFSRFSSVVQEFGMFRSTADHSVFYHHNSSGQCIYLVVYVDDIIITGSDQNGIQK 964

Query: 2260 VKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMD 2439
            +K++L  HF TKD+G+ KYFLGIEIA S SGV L QRKY  D+L+ETG+L  KPVDTPMD
Sbjct: 965  LKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYVLDILEETGMLDCKPVDTPMD 1024

Query: 2440 INPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIR 2619
             N  +    GE   D  +YRRLVGKL YLT+TRPDISF V +VS+F+  P   HWDA IR
Sbjct: 1025 PNVKLIPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIR 1084

Query: 2620 ILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQ 2799
            ILRYIK +P +G+ ++  GH +   Y+DAD+AGS  +RRS SGYC +IGGNL++W+SKKQ
Sbjct: 1085 ILRYIKSTPSQGVLYENRGHAQVVGYTDADWAGSPTNRRSISGYCVFIGGNLISWKSKKQ 1144

Query: 2800 TTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGF 2901
              VA+S+ EAEYRAMA    E++WLK+LL EL F
Sbjct: 1145 DVVAKSSVEAEYRAMALATCELIWLKHLLRELRF 1178



 Score =  352 bits (904), Expect(4) = 0.0
 Identities = 178/344 (51%), Positives = 222/344 (64%), Gaps = 6/344 (1%)
 Frame = +3

Query: 441  SPYQWHCRLGHPSPSSLKCLVPVQSI--DFQCESCEFGKHHRTSFPSRVDKRSSFAFELV 614
            +P   H  LGHPS S  + +VP  S      CESC+ GKH R SFP R++ R+   FELV
Sbjct: 368  APLLIHSCLGHPSLSKFQKMVPSFSSLSSLACESCQLGKHTRVSFPKRLNNRAKSPFELV 427

Query: 615  HCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSIDL 794
            H DVWGP +  S  GFQYF+ F+DDYSR TWL+L+KNR+E+  + + F+ EI+TQ++I +
Sbjct: 428  HTDVWGPCRTASTLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYAEIQTQFNISI 487

Query: 795  RTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHMN 974
            R LR+DNA E+     ++F + +GIIHQ+SC +T QQNGVAERK+RH ++ ARTLL H +
Sbjct: 488  RVLRSDNAREYFSAPFTSFMSQYGIIHQSSCAHTPQQNGVAERKNRHFVETARTLLLHSH 547

Query: 975  VPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTPG 1154
            VP   WGDA LTAC+LINRMPS+VLH  IP S L PD+PL+ LPPRIF C CFVH  TPG
Sbjct: 548  VPFRFWGDAILTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRIFCCTCFVHILTPG 607

Query: 1155 LDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFSPNPVQPSXXXX 1334
             DKLS ++ KCI LGYSR QKGYRC    T R +  ADVTFFE  P+FS +   P     
Sbjct: 608  HDKLSVRATKCIFLGYSRLQKGYRCYSSKTHRYFLSADVTFFEDSPFFSTSKSLP----- 662

Query: 1335 XXXXXXXXXXXXXXXXXXXKPLQVYTRRSR----PELGSCPSPS 1454
                               +PLQVY RR R    P L   P+ S
Sbjct: 663  -VSEVLPLPIISPLDAVPSRPLQVYYRRHRVAVPPSLAEVPADS 705



 Score = 72.4 bits (176), Expect(4) = 0.0
 Identities = 40/104 (38%), Positives = 57/104 (54%)
 Frame = +2

Query: 59  KSWMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTYSPITGTGVVRPTTNITLDNVL 238
           K W+LDSGA+ HI+GNK              V LA+G+ +   G G   P     L +VL
Sbjct: 263 KPWILDSGASDHISGNKDLFSSITTTSALPTVALANGSQTMAKGFGFAHP-----LHSVL 317

Query: 239 FAPKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKRMIGGG 370
           +AP+ P +L+SIS++ +T NCS+TF   +   QD  T + I  G
Sbjct: 318 YAPECPFNLISISKIARTLNCSITFSNKFVTLQDRSTGKTISIG 361



 Score = 24.3 bits (51), Expect(4) = 0.0
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +2

Query: 1499 DLPIALRKGIRS 1534
            DLPIALRKG RS
Sbjct: 722  DLPIALRKGNRS 733


>emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]
          Length = 1258

 Score =  478 bits (1231), Expect(3) = 0.0
 Identities = 253/540 (46%), Positives = 334/540 (61%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N  S+  L   +  F  ++SS  +P S  +A  H  WR AM +EM+AL S  TW+L
Sbjct: 781  HPIYNFFSYHRLSSPYSAFVSALSSVSLPKSTPKALSHPGWRQAMVDEMAALHSNDTWDL 840

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  P     V CRWV+T+K   DG +DR KARLVAKG+TQ YG DY +TFS  A++ S+R
Sbjct: 841  VVLPYGKSTVGCRWVYTVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFSLVAKIASVR 900

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +L S+A  +SW +YQLD+KN FL+GDL E V+MEQPPG+VAQGE +++VC+L++++YGLK
Sbjct: 901  LLLSMAAMRSWHLYQLDIKNVFLHGDLVEEVYMEQPPGFVAQGE-SSLVCRLRRSLYGLK 959

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXXSGSDIRGIDEV 2262
            QSPRAWF +FS+++      +  +DH VF  H+++G                 I G D+ 
Sbjct: 960  QSPRAWFSRFSSVVQEFGMFRNTADHSVFYHHNSSGQCIYLVVYVDDIV----ITGSDQ- 1014

Query: 2263 KKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMDI 2442
                                GIEIA S SG  L QRKY  D+L+ETG L  KPVDTPM+ 
Sbjct: 1015 -------------------NGIEIAQSSSGEVLSQRKYVLDILEETGTLDCKPVDTPMEP 1055

Query: 2443 NPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIRI 2622
            N  +    G+   D  +Y RLVGKL YL +TRP+I                         
Sbjct: 1056 NVKLIPGQGKPLGDLGRYWRLVGKLNYLAITRPNI------------------------- 1090

Query: 2623 LRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQT 2802
                        SF   GH +   Y+DAD+AGS  DRRSTSGYC +IGGNL++W+SKKQ 
Sbjct: 1091 ------------SFPNRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQD 1138

Query: 2803 TVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHER 2982
             VARS+AEAEYRAM     E++WLK LL EL F  +E + + CDNQAA+HIASNPVFHER
Sbjct: 1139 VVARSSAEAEYRAMTLATCELIWLKYLLPELRFGKDEQMKLICDNQAALHIASNPVFHER 1198

Query: 2983 TKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAPA 3162
            TKHIEVD HFIRE++ +  ++T F +S++Q+A++FTK+L G R   +C+KL   +IYAPA
Sbjct: 1199 TKHIEVDYHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYNIYAPA 1258



 Score =  338 bits (868), Expect(3) = 0.0
 Identities = 174/358 (48%), Positives = 223/358 (62%), Gaps = 9/358 (2%)
 Frame = +3

Query: 408  HLHLPEPSQQMS---PYQWHCRLGHPSPSSLKCLVPVQSI--DFQCESCEFGKHHRTSFP 572
            HL  P P+  +S   P   H RLGHPS S  + +VP  S      CESC+ GKH R   P
Sbjct: 397  HLTSPSPAVCISTDAPLLIHSRLGHPSLSKFQKMVPNFSSLSSLACESCQLGKHTRVLSP 456

Query: 573  SRVDKRSSFAFELVHCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLK 752
              ++ R+ + FELVH DVWGP +  S  GFQYF+ F+DDYSR TWL+L KNR+E+  + +
Sbjct: 457  KHLNNRAKYPFELVHTDVWGPCRTASTLGFQYFVTFIDDYSRCTWLFLTKNRTELFSIFQ 516

Query: 753  SFHHEIKTQYSIDLRTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHR 932
             F+ +I+T+++I +R LR+DNA E+     ++F + HGIIHQ+SC +T QQN VAERK++
Sbjct: 517  KFYAKIQTRFNISIRVLRSDNAKEYFSAPFTSFMSQHGIIHQSSCTHTPQQNRVAERKNQ 576

Query: 933  HILDVARTLLCHMNVPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPR 1112
            H+++ ARTLL H +V    W DA LTAC+LINRMPS VLH  IP S L PD+PL+ LPP 
Sbjct: 577  HLVETARTLLLHNHVSFRFWEDAVLTACYLINRMPSFVLHDQIPHSLLFPDQPLYFLPPH 636

Query: 1113 IFGCVCFVHNFTPGLDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQP 1292
            +FGC CFV N T G DKLS ++ KCI LGYSR QKGYRC    T R +  ADVTFFE  P
Sbjct: 637  VFGCTCFVQNLTLGQDKLSARATKCIFLGYSRLQKGYRCYSSETHRYFLSADVTFFEDSP 696

Query: 1293 YFSPNPVQPSXXXXXXXXXXXXXXXXXXXXXXXKPLQVYTRRSR----PELGSCPSPS 1454
            +FS +   P                        +PLQVY RR R    P L + P+ S
Sbjct: 697  FFSTSEFLP------VSEVLPLPIISPPDVVPSRPLQVYHRRHRVAVPPSLAAIPADS 748



 Score = 23.1 bits (48), Expect(3) = 0.0
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 1499 DLPIALRKGIRS 1534
            DLPIA+RKG RS
Sbjct: 765  DLPIAVRKGNRS 776



 Score = 80.1 bits (196), Expect = 1e-11
 Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
 Frame = +2

Query: 74  DSGATAHITGNKXXXXXXXXXXXXXPVRLADGTYSPITGTGVVRPTTNITLDNVLFAPKF 253
           +S  + HI+GNK              V LA+G+ +   G G   P  ++   +VL+A + 
Sbjct: 291 NSSTSDHISGNKDLFSSITTTSALPTVTLANGSQTMAKGFGFAHPLPSLPFHSVLYAHEC 350

Query: 254 PVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKRMIGGGHERDGLFYLDSVTPASSRALS 433
           P +L+SIS++T+T NCS+TF   +   QD  T + IG G E  GL++L S +PA    +S
Sbjct: 351 PFNLISISKITRTLNCSITFSDKFVTLQDRSTGKTIGIGRESQGLYHLTSPSPAV--CIS 408

Query: 434 TNVSLSV----ALSSWSPFSFLPQMFSSCS 511
           T+  L +       S S F  +   FSS S
Sbjct: 409 TDAPLLIHSRLGHPSLSKFQKMVPNFSSLS 438


>emb|CAN81716.1| hypothetical protein VITISV_032903 [Vitis vinifera]
          Length = 1170

 Score =  527 bits (1357), Expect(3) = 0.0
 Identities = 265/541 (48%), Positives = 357/541 (65%), Gaps = 1/541 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L   +  F  ++SS  +P S SE   H  WR AM +EM+AL S  TW+L
Sbjct: 654  HPIYNFLSYHRLSSSYSAFVSTLSSVSLPKSISETLSHLGWRQAMVDEMAALHSNDTWDL 713

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V+ PP   I  CRWV+T+K           ARLVAKG+TQ  G DY +TFSP A++ S+R
Sbjct: 714  VSLPPDKSIAGCRWVYTVK-----------ARLVAKGYTQICGCDYGDTFSPVAKIASVR 762

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +  S+     WP YQLD+KNAFL+G+L E            +GE+  +VCKL++++YGLK
Sbjct: 763  LFLSMVPMCHWPFYQLDIKNAFLHGELLE------------EGESG-LVCKLRRSLYGLK 809

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRH-STNGXXXXXXXXXXXXXSGSDIRGIDE 2259
            QSPR WF +FS ++      + + DH VF  H S +              +GSD  GI  
Sbjct: 810  QSPRVWFGRFSLVVQEFGMLRSEVDHSVFYHHNSLSQCIYLVVYVDDIVITGSDQEGIQR 869

Query: 2260 VKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMD 2439
            +K+++  HF TKD+G+ KYFLG+EIA S S V + Q KY  D+L+E G+L  KPVDTPM+
Sbjct: 870  LKQHIFNHFQTKDLGKLKYFLGLEIAQSSSSVVMSQMKYTLDILEEIGMLKCKPVDTPMN 929

Query: 2440 INPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIR 2619
             N  +    GE   D  +YRRL+GKL Y T+TRPDISF + +VS+F+  P   HWDA I 
Sbjct: 930  PNVKLVLGQGEPLRDSRRYRRLIGKLNYFTITRPDISFPMSVVSQFLQSPCNNHWDAVIH 989

Query: 2620 ILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQ 2799
            ILRYIK  PG+G+ ++  GH +   Y+DAD+AGS +DR STS YC +IGGNL++W+SKKQ
Sbjct: 990  ILRYIKGIPGQGMLYEDRGHTQIVGYTDADWAGSPSDRHSTSRYCIFIGGNLISWKSKKQ 1049

Query: 2800 TTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHE 2979
              VARS+AEAEYRAMA    E++WL+ LL+EL F  +E + + CDNQ A+HIASN VFHE
Sbjct: 1050 DVVARSSAEAEYRAMALATCELIWLRQLLQELRFGKDEQIKLVCDNQTALHIASNLVFHE 1109

Query: 2980 RTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAP 3159
            RTKHIEVDCHFIRE++ +  ++T F +S++Q+A++FTK+L G R   +C+KL   DIYAP
Sbjct: 1110 RTKHIEVDCHFIREKIASGCVATSFANSNDQLADIFTKSLRGPRIKYICNKLGAYDIYAP 1169

Query: 3160 A 3162
            A
Sbjct: 1170 A 1170



 Score =  264 bits (674), Expect(3) = 0.0
 Identities = 147/337 (43%), Positives = 181/337 (53%), Gaps = 5/337 (1%)
 Frame = +3

Query: 456  HCRLGHPSPSSLKCLVPVQSI--DFQCESCEFGKHHRTSFPSRVDKRSSFAFELVHCDVW 629
            H RLGHPS S  + +VP  S      CESC+ GKH R SFP R++ R+   FELVH DVW
Sbjct: 335  HSRLGHPSLSKFQKMVPHFSTLSSLACESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVW 394

Query: 630  GPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSIDLRTLRT 809
            GP    S  GFQYF+ F+DDYSR+                                 LR+
Sbjct: 395  GPCWTVSILGFQYFVTFIDDYSRL---------------------------------LRS 421

Query: 810  DNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHMNVPKYL 989
            DNA E+     ++F + HGI+HQ+SC +T QQNGV E K+RH+++ AR            
Sbjct: 422  DNAREYFSTPFTSFMSQHGILHQSSCAHTPQQNGVVECKNRHLVETAR------------ 469

Query: 990  WGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTPGLDKLS 1169
              +A L  C+LI+RMPS++LH  IP S L P +PL+ LPPR+FGC CFVH  TPG DKLS
Sbjct: 470  --NAVLITCYLIDRMPSSILHDQIPHSLLFPTQPLYFLPPRVFGCTCFVHTLTPGQDKLS 527

Query: 1170 PQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFSPNPVQPSXXXXXXXXX 1349
             ++ KCI LGYSR QKGYRC  P T R +   DVTFFE  P+FS +   P          
Sbjct: 528  AKATKCIFLGYSRLQKGYRCYSPDTHRYFLSIDVTFFEDSPFFSSSESLPISEVLPLPYI 587

Query: 1350 XXXXXXXXXXXXXXKPLQVYTRRSR---PELGSCPSP 1451
                           PLQVY RR R   P L S   P
Sbjct: 588  SPPSNALSC------PLQVYHRRHRVVAPPLSSVEVP 618



 Score = 46.6 bits (109), Expect(3) = 0.0
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
 Frame = +2

Query: 65  WMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTYSPITGTGVVRPTTNITLDNVLFA 244
           W+LD GA+ HI+GNK              V LA+G+ +   G G+  P     L +VL A
Sbjct: 235 WILDFGASDHISGNKHLFSSITTTSALPTVTLANGSQTMTKGIGLAHP-----LHSVLHA 289

Query: 245 PKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKRMIGGGHERDGLFYLDSVTPASSR 424
           P++P +L                        D  T++ IG   E  GL++L S  P+S  
Sbjct: 290 PEYPFNL------------------------DRSTRKTIGIERESQGLYHLTS--PSSPV 323

Query: 425 A-LSTNVSLSV 454
           A +ST+  L +
Sbjct: 324 ACISTDALLLI 334


>emb|CAN73101.1| hypothetical protein VITISV_042890 [Vitis vinifera]
          Length = 772

 Score =  615 bits (1585), Expect = 0.0
 Identities = 297/541 (54%), Positives = 389/541 (71%), Gaps = 1/541 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L   +  F  +ISS  +P S  EA  H  WR AM +EM+AL S GTW+L
Sbjct: 233  HPIYNFLSYHRLSSPYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMAALHSNGTWDL 292

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  P     V CRWV+ +K   DG +DR KARLVAKG+TQ YG DY +TFSP A++ S+R
Sbjct: 293  VVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFSPVAKIASVR 352

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +L S+A   SWP+YQLD+KN FL+GDL E V+MEQPPG+VAQGE+  +VC+L++++YGLK
Sbjct: 353  LLLSMAAMCSWPLYQLDIKNVFLHGDLAEEVYMEQPPGFVAQGESG-LVCRLRRSLYGLK 411

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXX-SGSDIRGIDE 2259
            QSPRAWF +FS+++      +  +DH VF  H++ G              +GSD  GI +
Sbjct: 412  QSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQK 471

Query: 2260 VKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMD 2439
            +K++L  HF TKD+G+ KYFLGIEIA S SGV   QRKYA D+L+ETG+L  KPVDTPMD
Sbjct: 472  LKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVFSQRKYALDILEETGMLDCKPVDTPMD 531

Query: 2440 INPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIR 2619
             N  +    GE   D  +YRRLVGKL YLT+TRPDISF V +VS+F+  P   HWD  IR
Sbjct: 532  PNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDVVIR 591

Query: 2620 ILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQ 2799
            ILRYIK +PG+G+ ++  GH +   Y+DAD+AGS  DRRSTSGYC +IGGNL++W+SKKQ
Sbjct: 592  ILRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQ 651

Query: 2800 TTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHE 2979
              VARS+AEAEYRAMA    E++WL++LL+EL F  +E + + CDNQAA+HIASNPVFHE
Sbjct: 652  DVVARSSAEAEYRAMALATCELIWLRHLLQELRFGNDEQMKLICDNQAALHIASNPVFHE 711

Query: 2980 RTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAP 3159
            RTKHIEVDCHFIRE++ +  ++T F +S++Q+A++FTK+L G R   +C+KL   D+YAP
Sbjct: 712  RTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAP 771

Query: 3160 A 3162
            A
Sbjct: 772  A 772



 Score =  212 bits (540), Expect = 6e-54
 Identities = 96/147 (65%), Positives = 115/147 (78%)
 Frame = +3

Query: 861  HGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHMNVPKYLWGDAALTACFLINRMPS 1040
            HGI+HQ+SC +T QQNGVAERK+RH+++ ARTLL H +VP   WGDA LTAC+LINRMPS
Sbjct: 4    HGILHQSSCAHTPQQNGVAERKNRHLVETARTLLLHSHVPFRFWGDAVLTACYLINRMPS 63

Query: 1041 TVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTPGLDKLSPQSIKCIMLGYSRTQKG 1220
            +VLH  IP S L PD+PL+ LPPR+FGC CFVH  TPG DKLS +++KC+ LGYSR QKG
Sbjct: 64   SVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKG 123

Query: 1221 YRCLDPLTKRCYTCADVTFFESQPYFS 1301
            YRC    T R +  ADVTFFE  P+FS
Sbjct: 124  YRCYSLETHRYFISADVTFFEDSPFFS 150


>emb|CAN81715.1| hypothetical protein VITISV_032902 [Vitis vinifera]
          Length = 848

 Score =  613 bits (1582), Expect = 0.0
 Identities = 297/541 (54%), Positives = 389/541 (71%), Gaps = 1/541 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L   +  F  +ISS  +P S  EA  H  WR AM +EM+AL S  TW+L
Sbjct: 309  HPIYNFLSYHRLSSPYSAFVSAISSVSLPMSTHEALSHPGWRQAMVDEMAALHSNDTWDL 368

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  PP    V CRWV+ +K   DG +DR KARLV KG+TQ YG DY +TFSP A++ S+R
Sbjct: 369  VVLPPGKSTVGCRWVYAVKVGPDGQVDRLKARLVXKGYTQVYGSDYGDTFSPVAKIASVR 428

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +L S+A   SWP+YQLD+KNA L+GDL E V+MEQPPG+VAQGE+  +VC+L++++YGLK
Sbjct: 429  LLLSMAAMCSWPLYQLDIKNASLHGDLXEEVYMEQPPGFVAQGESG-LVCRLRRSLYGLK 487

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXX-SGSDIRGIDE 2259
            Q PRAWF +FS+++      +  +DH VF  H++ G              +GSD  GI +
Sbjct: 488  QXPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQK 547

Query: 2260 VKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMD 2439
            +K++L  HF TKD+G+ KYFLGIEIA S SGV L QRKYA D+L+ETG+L  KPVDTPMD
Sbjct: 548  LKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVXLSQRKYALDILEETGMLDCKPVDTPMD 607

Query: 2440 INPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIR 2619
             N  +    GE   D  +YRRLVGKL YLT+TRPDISF V +VS+F+  P   HWDA IR
Sbjct: 608  PNVKLVXGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIR 667

Query: 2620 ILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQ 2799
            ILRYIK +PG+G+ ++  GH +   Y+DAD+AGS  DRRSTSGYC +IGGNL++W+SKKQ
Sbjct: 668  ILRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQ 727

Query: 2800 TTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHE 2979
              VARS+AEAEYRAMA    E++WL++LL+EL F  +E + + CDNQAA+HIASNPVFHE
Sbjct: 728  DVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHE 787

Query: 2980 RTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAP 3159
            RTKHIEVDCHFIRE++ +  ++T F +S++Q+A++FTK+L G R   +C+KL   D+YAP
Sbjct: 788  RTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAP 847

Query: 3160 A 3162
            A
Sbjct: 848  A 848



 Score =  286 bits (732), Expect = 4e-79
 Identities = 130/224 (58%), Positives = 167/224 (74%)
 Frame = +3

Query: 630  GPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSIDLRTLRT 809
            G  +  S  GFQYF+ F+DDYSR TWL+L+KNR+E+  + + F+ EI+TQ++I +R LR+
Sbjct: 3    GSCRTASTLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYTEIQTQFNISIRVLRS 62

Query: 810  DNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHMNVPKYL 989
            DNA E+     ++F + HGI+HQ+SC +T QQNGVAERK+RH+++ ARTLL H +VP   
Sbjct: 63   DNAREYFSAQFTSFMSHHGILHQSSCAHTPQQNGVAERKNRHLVETARTLLLHSHVPFRF 122

Query: 990  WGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTPGLDKLS 1169
            WGD  LTAC+LINRMPS+VLH  IP S L PD+PL+ LPPR+FGC CFVH  TPG DKLS
Sbjct: 123  WGDVVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLS 182

Query: 1170 PQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFS 1301
             +++KC+ LGYSR QKGYRC    T R +  ADVTFFE  P FS
Sbjct: 183  AKAMKCLFLGYSRLQKGYRCYSLETHRYFISADVTFFEDSPXFS 226


>gb|KYP45104.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 512

 Score =  596 bits (1536), Expect = 0.0
 Identities = 285/513 (55%), Positives = 376/513 (73%), Gaps = 1/513 (0%)
 Frame = +1

Query: 1627 PTSYSEAYQHSAWRTAMDEEMSALISRGTWELVTAPPLADIVACRWVFTLKYKADGTIDR 1806
            P +  EA  H  WR AM +EM+AL S  TW LV  PP   +V CRWVF +K   DG +DR
Sbjct: 1    PKTVQEALTHPGWRQAMIDEMTALDSNHTWVLVPPPPGKSVVGCRWVFNVKVGPDGQVDR 60

Query: 1807 YKARLVAKGFTQTYGVDYFETFSPTARMNSIRVLFSLAVNQSWPMYQLDVKNAFLYGDLH 1986
             KARLVAKG+TQ YG+DY +TFSP A+M S+R+  ++A  + WP++QLD+KNAFL+GDL 
Sbjct: 61   LKARLVAKGYTQVYGLDYSDTFSPVAKMASVRLFLAMAAMRHWPLFQLDIKNAFLHGDLE 120

Query: 1987 ETVFMEQPPGYVAQGENATMVCKLKKAIYGLKQSPRAWFDKFSNILGAVDFKQCKSDHFV 2166
            E ++M+QPPG+VAQG +  +VCKL+K++YGLKQSPRAWF +FS ++      +C++DH V
Sbjct: 121  EEIYMDQPPGFVAQGGSG-LVCKLQKSLYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSV 179

Query: 2167 FVRHS-TNGXXXXXXXXXXXXXSGSDIRGIDEVKKYLQQHFVTKDMGRPKYFLGIEIAHS 2343
            F R S T+              +G D  GI  +K++L +HF TKD+G  +YFLGIE+A S
Sbjct: 180  FFRRSSTHRFIYLVVYVDDIVITGDDQEGIKALKQHLFKHFQTKDLGPLRYFLGIEVAQS 239

Query: 2344 KSGVSLCQRKYATDLLKETGLLGTKPVDTPMDINPSVWDDNGEFFEDKAKYRRLVGKLIY 2523
            KSG+++ QRKYA D+L+ETGL   KPVDTPMD N  +  + GE + D  +YRRLVGKL Y
Sbjct: 240  KSGIAISQRKYALDILEETGLTDCKPVDTPMDPNVKLMPNQGEPYPDPGRYRRLVGKLNY 299

Query: 2524 LTVTRPDISFAVGMVSRFMDKPKQVHWDAAIRILRYIKKSPGKGLSFKRNGHLKTEAYSD 2703
            LT+TRPDISF V +VS+F++ P + HW A +RILRYIK+SPGKGL +   GH     YSD
Sbjct: 300  LTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKRSPGKGLVYNDRGHTNIVGYSD 359

Query: 2704 ADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQTTVARSTAEAEYRAMAHTVTEMLWLKNL 2883
            AD+AG  +DRRSTSGYC ++GGNLV+W+SKKQ+ VARS+ EAEYRAMAHT  E+LWLK L
Sbjct: 360  ADWAGDASDRRSTSGYCVFMGGNLVSWKSKKQSVVARSSTEAEYRAMAHTTCELLWLKFL 419

Query: 2884 LEELGFTYNEPLPMYCDNQAAIHIASNPVFHERTKHIEVDCHFIRERVMNQKISTPFTSS 3063
            ++EL F     + + CDNQ+A++++SNPVFHERTKHIEVDCHFIRE++++  I T    S
Sbjct: 420  IQELQFCKVGHMELVCDNQSALYLSSNPVFHERTKHIEVDCHFIREKILSGIIKTSSVCS 479

Query: 3064 SNQVANVFTKALGGKRFSELCDKLDMIDIYAPA 3162
             +Q+A++FTK+L G R + +C+KLD  DIYAPA
Sbjct: 480  KDQLADIFTKSLRGPRITYICNKLDAYDIYAPA 512


>gb|KYP58900.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 512

 Score =  594 bits (1531), Expect = 0.0
 Identities = 281/513 (54%), Positives = 375/513 (73%), Gaps = 1/513 (0%)
 Frame = +1

Query: 1627 PTSYSEAYQHSAWRTAMDEEMSALISRGTWELVTAPPLADIVACRWVFTLKYKADGTIDR 1806
            P +  EA  H  WR AM  EM AL   GTWELV  PP    V CRWV+ +K   DGT+DR
Sbjct: 1    PKNVHEALDHPGWRQAMIAEMQALEHSGTWELVPLPPGKQPVGCRWVYAIKVGPDGTVDR 60

Query: 1807 YKARLVAKGFTQTYGVDYFETFSPTARMNSIRVLFSLAVNQSWPMYQLDVKNAFLYGDLH 1986
             KARLVAKG+TQ YG+DY +TFSP A++ ++R+  ++A  + WP++QLD+KNAFL+G+L 
Sbjct: 61   LKARLVAKGYTQIYGLDYGDTFSPVAKIPTVRLFLAMAAIRHWPLHQLDIKNAFLHGELE 120

Query: 1987 ETVFMEQPPGYVAQGENATMVCKLKKAIYGLKQSPRAWFDKFSNILGAVDFKQCKSDHFV 2166
            E ++MEQPPG+VAQGE+  +VC+L++++YGLKQSPRAWF KFS+++     K+ ++DH V
Sbjct: 121  EEIYMEQPPGFVAQGESG-LVCRLRRSLYGLKQSPRAWFGKFSHVVQNFGLKRSEADHSV 179

Query: 2167 FVRHSTNGXXXXXXXXXXXXX-SGSDIRGIDEVKKYLQQHFVTKDMGRPKYFLGIEIAHS 2343
            F  H++ G              +G+D   I ++KK+L   F TKD+G  +YFLGIE+A S
Sbjct: 180  FYCHTSPGRCVYLIVYVDDIVITGNDATTISQLKKHLFSQFQTKDLGHLRYFLGIEVAQS 239

Query: 2344 KSGVSLCQRKYATDLLKETGLLGTKPVDTPMDINPSVWDDNGEFFEDKAKYRRLVGKLIY 2523
            K G+ + QRKYA D+LKETG+L  KP+D+PMD N  +  D GE F D  +YRRLVGKLIY
Sbjct: 240  KEGIVISQRKYAIDILKETGMLDCKPIDSPMDPNQKLMADQGELFTDPERYRRLVGKLIY 299

Query: 2524 LTVTRPDISFAVGMVSRFMDKPKQVHWDAAIRILRYIKKSPGKGLSFKRNGHLKTEAYSD 2703
            LT+TRPD+SFAVG+VS+FM  P   HW+A +RILRYIKK+PG+GL ++  G  +   Y D
Sbjct: 300  LTITRPDLSFAVGIVSQFMQAPHIDHWNAVLRILRYIKKAPGQGLLYEDKGDSQISGYCD 359

Query: 2704 ADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQTTVARSTAEAEYRAMAHTVTEMLWLKNL 2883
            AD+AG   DRRST+GYC ++GGNL++W+SKKQ  VARS+AEAEYRAMA    E++W+K L
Sbjct: 360  ADWAGCPIDRRSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMALITCELMWIKQL 419

Query: 2884 LEELGFTYNEPLPMYCDNQAAIHIASNPVFHERTKHIEVDCHFIRERVMNQKISTPFTSS 3063
            L+EL F    P+ +YCDNQAA+HIASNPVFHERTKHIEVDCHF+RE++++++I T F +S
Sbjct: 420  LQELKFCEGHPMKLYCDNQAALHIASNPVFHERTKHIEVDCHFVREKLLSKEIVTKFVTS 479

Query: 3064 SNQVANVFTKALGGKRFSELCDKLDMIDIYAPA 3162
            + Q+A+V TK+L G R   LC KL   ++YA A
Sbjct: 480  NEQLADVLTKSLRGPRIQFLCSKLGAYNLYASA 512


>gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1402

 Score =  621 bits (1601), Expect = 0.0
 Identities = 297/546 (54%), Positives = 393/546 (71%), Gaps = 1/546 (0%)
 Frame = +1

Query: 1528 SFCTTHPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISR 1707
            S C  HP+ N +S+  L P +  F  +I S  +P +  EA  H  WR AM +EM+AL S 
Sbjct: 858  STCNPHPIYNFLSYHRLSPTYYAFVSAIFSITIPKTVQEALTHPGWRQAMIDEMTALDSN 917

Query: 1708 GTWELVTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTAR 1887
             TW LV  PP   +V CRWVF +K   DG +DR KARLVAKG+TQ YG+DY +TFSP A+
Sbjct: 918  HTWVLVPPPPGKSVVGCRWVFNVKVGPDGQVDRLKARLVAKGYTQVYGLDYSDTFSPVAK 977

Query: 1888 MNSIRVLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKA 2067
            M S+R+  ++A  + WP++QLD+KNAFL+GDL E ++M+QPPG+VAQG +  +VCKL+K+
Sbjct: 978  MASVRLFLAMAAMRHWPLFQLDIKNAFLHGDLEEEIYMDQPPGFVAQGGSG-LVCKLQKS 1036

Query: 2068 IYGLKQSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHS-TNGXXXXXXXXXXXXXSGSDI 2244
            +YGLKQSPRAWF +FS ++      +C++DH VF R S T+              +G D 
Sbjct: 1037 LYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRRSSTHRFIYLVVYVDDIVITGDDQ 1096

Query: 2245 RGIDEVKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPV 2424
             GI  +K++L +HF TKD+G  +YFLGIE+A SKSG+++ QRKYA D+L+ETGL   KPV
Sbjct: 1097 EGIKALKQHLFKHFQTKDLGPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLTDCKPV 1156

Query: 2425 DTPMDINPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHW 2604
            DTPMD N  +  + GE + D  +YRRLVGKL YLT+TRPDISF V +VS+F++ P + HW
Sbjct: 1157 DTPMDPNVKLMPNQGEPYSDPGRYRRLVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHW 1216

Query: 2605 DAAIRILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTW 2784
             A +RILRYIK+SPGKGL +   GH     YSDAD+AG  +DRRSTSGYC ++GGNLV+W
Sbjct: 1217 LAVVRILRYIKRSPGKGLVYNDRGHTNIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSW 1276

Query: 2785 RSKKQTTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASN 2964
            +SKKQ+ VARS+ EAEYRAMAHT  E+LWLK L++EL F     + + CDNQ+A++++SN
Sbjct: 1277 KSKKQSVVARSSTEAEYRAMAHTTCELLWLKFLIQELQFCKVGHMELVCDNQSALYLSSN 1336

Query: 2965 PVFHERTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMI 3144
            PVFHERTKHIEVDCHFIRE++++  I T    S NQ+A++FTK+L G R + +C+KLD  
Sbjct: 1337 PVFHERTKHIEVDCHFIREKILSGIIKTSSVCSKNQLADIFTKSLRGPRITYICNKLDAY 1396

Query: 3145 DIYAPA 3162
            DIYAPA
Sbjct: 1397 DIYAPA 1402



 Score =  343 bits (881), Expect(2) = e-111
 Identities = 163/295 (55%), Positives = 210/295 (71%), Gaps = 2/295 (0%)
 Frame = +3

Query: 441  SPYQWHCRLGHPSPSSLKCLVPVQSI--DFQCESCEFGKHHRTSFPSRVDKRSSFAFELV 614
            SP   H RLGHPS + LK +VP  S     +CESC+ GKH R SFP+ ++ R+   F+++
Sbjct: 467  SPGLIHRRLGHPSLNKLKKMVPHLSRLESLECESCQLGKHVRASFPNSINSRAMSPFDVI 526

Query: 615  HCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSIDL 794
            H DVWGPS++ S  G +Y++ F+DD+SR TW++L+KNRSE+ ++  SF+ EIKTQ+   +
Sbjct: 527  HSDVWGPSRIPSLLGHRYYVTFIDDFSRCTWIFLMKNRSELFNIFLSFYSEIKTQFGKVI 586

Query: 795  RTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHMN 974
            R LR+DNA E+      +F ASHGI+HQ+SC +T QQNGVAERKHRHI+D ARTLL + N
Sbjct: 587  RILRSDNAKEYFSDCFKSFMASHGILHQSSCPHTPQQNGVAERKHRHIVDTARTLLLNAN 646

Query: 975  VPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTPG 1154
             P  LWGDA LTA +LINRMPS+VL+  +P S L+P  PL+ + PR+FGC CFVH+   G
Sbjct: 647  APPKLWGDAVLTAGYLINRMPSSVLNDQVPHSLLYPLDPLYSVHPRVFGCTCFVHDLFSG 706

Query: 1155 LDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFSPNPVQP 1319
              KLS ++IKC+ LGYSR QKGYRC  P T R YT ADVTFFE  PYF    V P
Sbjct: 707  RAKLSARAIKCVFLGYSRVQKGYRCYSPATHRFYTSADVTFFEDTPYFIATDVSP 761



 Score = 91.3 bits (225), Expect(2) = e-111
 Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
 Frame = +2

Query: 5   SPSTIAASSTGAFVVSHGKS---WMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTY 175
           S  T+A +      +SH  S   W+LDSGA+ H+TGN               + LADG+ 
Sbjct: 321 SSITVAHTGNSTVCLSHSTSIGPWVLDSGASDHLTGNVSLFPNLSSPRTPHHITLADGSK 380

Query: 176 SPITGTGVVRPTTNITLDNVLFAPKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKR 355
              TG G + P  ++ L +VL  P  P +L+SIS+LT++ NC +TF     + QD  T +
Sbjct: 381 VQATGIGQISPLPSLPLKSVLLVPGCPFNLISISKLTRSLNCVITFTSDSFLIQDRSTGQ 440

Query: 356 MIGGGHERDGLFYLDSVT 409
            IG G E  GL+YL   T
Sbjct: 441 TIGAGSESHGLYYLQPST 458


>gb|KOM38790.1| hypothetical protein LR48_Vigan03g217200 [Vigna angularis]
          Length = 1119

 Score =  612 bits (1579), Expect = 0.0
 Identities = 290/543 (53%), Positives = 393/543 (72%), Gaps = 3/543 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            +P+ N +S+  L P + +F  S+S+ +VP +  EA  H  WR AM +EM AL   GTW+L
Sbjct: 578  YPVYNFLSYHRLSPTYFSFVSSLSNIKVPNNVREALDHPGWRQAMIDEMQALDKSGTWDL 637

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  PP    V CRWV+ +K    G IDR KARLVAKG+TQ YG+DY +TFSP A+++S+R
Sbjct: 638  VPLPPDKKPVGCRWVYAIKVGPTGAIDRLKARLVAKGYTQVYGLDYCDTFSPVAKISSVR 697

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGY--VAQGENATMVCKLKKAIYG 2076
            +  ++A  + WP++QLD+KNAFL+GDL E ++MEQPPG+  VAQGE   +VCKL++++YG
Sbjct: 698  LFLAMAAIRQWPLHQLDIKNAFLHGDLEEEIYMEQPPGFSCVAQGETK-LVCKLRRSLYG 756

Query: 2077 LKQSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHST-NGXXXXXXXXXXXXXSGSDIRGI 2253
            LKQSPRAWF KFS+++     K+C++DH VF  HST +              +G+D+  I
Sbjct: 757  LKQSPRAWFGKFSHVVQQFGLKRCEADHLVFYGHSTPDKCVYLMVYVDDIVITGNDVARI 816

Query: 2254 DEVKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTP 2433
             ++K +L  HF TKD+GR KYFLGIE+A SK GV + QRKYA D+L+ETGL   KP+D+ 
Sbjct: 817  AQLKDHLFNHFQTKDLGRLKYFLGIEVAQSKEGVIISQRKYALDILEETGLTDCKPIDSR 876

Query: 2434 MDINPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAA 2613
            M  N  +  D+GE F +  +YRRLVGKLIYLT+TRPD+S+ VG+VS+FM  P+  HW+A 
Sbjct: 877  MVSNKKLMKDHGEPFSNPERYRRLVGKLIYLTITRPDLSYPVGVVSQFMQNPRIDHWNAV 936

Query: 2614 IRILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSK 2793
            +RILRY+K +P  GL ++  G  + E Y DAD+AG  NDRRST+GYC  +GGNLV+W+SK
Sbjct: 937  VRILRYVKGNPDHGLLYENKGSTELEGYCDADWAGCPNDRRSTTGYCVLLGGNLVSWKSK 996

Query: 2794 KQTTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVF 2973
            KQ+ VARS+AEAEYR+MA    E++W+K LL+EL F  N+P+ +YCDNQAA+HIASNPVF
Sbjct: 997  KQSVVARSSAEAEYRSMAIATCELIWIKQLLQELKFCENKPMKLYCDNQAALHIASNPVF 1056

Query: 2974 HERTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIY 3153
            HERTKHIE+DCHFIRE+++++ + T F  S+ Q A++FTK+L G R   +C KL   D+Y
Sbjct: 1057 HERTKHIEIDCHFIREKLLSKDLITEFVHSNEQFADIFTKSLRGPRIQFICSKLGAYDLY 1116

Query: 3154 APA 3162
            APA
Sbjct: 1117 APA 1119



 Score =  328 bits (842), Expect(2) = e-103
 Identities = 153/298 (51%), Positives = 210/298 (70%), Gaps = 4/298 (1%)
 Frame = +3

Query: 441  SPYQWHCRLGHPSPSSLKCLVP----VQSIDFQCESCEFGKHHRTSFPSRVDKRSSFAFE 608
            SP   H RLGHP+ S LK +VP    +  +D  CESC+ GKH R+S+P + + R    F 
Sbjct: 199  SPKILHDRLGHPNLSKLKLMVPSLKHIPVLD--CESCQLGKHVRSSYPKKSETRCKSIFS 256

Query: 609  LVHCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSI 788
             +H D+WGPS+V S G F YF+ F+D++SR T +YL+K RSE+  +  SF +EI+ Q+  
Sbjct: 257  TIHSDIWGPSRVTSFG-FNYFVTFIDEFSRCTRVYLMKERSELLAIFMSFVNEIQNQFGK 315

Query: 789  DLRTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCH 968
             ++ LR+DNA E+     S+F +S GI+HQ++C +T QQNG+AERK+RH+++  R+L+ +
Sbjct: 316  TIKILRSDNAKEYFSAAFSSFLSSKGILHQSTCPHTPQQNGIAERKNRHLIETTRSLMLN 375

Query: 969  MNVPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFT 1148
             NVP + WGDA LTACF INRMPS+ L   +P+S + P+  L+H+PPR+FGC CFVHN +
Sbjct: 376  TNVPVHHWGDAILTACFQINRMPSSSLENKVPYSVIFPNDALYHIPPRVFGCTCFVHNVS 435

Query: 1149 PGLDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFSPNPVQPS 1322
            PGLDKLSP+SIKC+ LGYSR QKGYRC  P T+R Y  +DVTFFE  P+F  +   PS
Sbjct: 436  PGLDKLSPKSIKCVFLGYSRIQKGYRCYSPSTRRNYMSSDVTFFEDTPFFLSSKEYPS 493



 Score = 79.3 bits (194), Expect(2) = e-103
 Identities = 40/112 (35%), Positives = 66/112 (58%)
 Frame = +2

Query: 62  SWMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTYSPITGTGVVRPTTNITLDNVLF 241
           SW+LDSGA+ H++GN               V +A+G+     G   V  + ++ L+++L+
Sbjct: 75  SWILDSGASNHLSGNTRLFSSITSQKDPQLVTIANGSKLTSQGIDKVSLSPSLNLNSILY 134

Query: 242 APKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKRMIGGGHERDGLFYL 397
            P  P +L+S+SQLT++ NCS+TF  +  + Q+  T R IG G+E  GL++L
Sbjct: 135 IPHCPYNLMSVSQLTRSLNCSITFTATSFVIQEHGTGRRIGEGYESGGLYFL 186


>gb|KOM52479.1| hypothetical protein LR48_Vigan09g113800 [Vigna angularis]
          Length = 496

 Score =  589 bits (1519), Expect = 0.0
 Identities = 278/497 (55%), Positives = 367/497 (73%), Gaps = 1/497 (0%)
 Frame = +1

Query: 1675 MDEEMSALISRGTWELVTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGV 1854
            M +EM AL   GTW+LV  PP    V CRW++T+K    G IDR KARLVAKG+TQ YG 
Sbjct: 1    MVDEMKALEHNGTWDLVPLPPDKKPVGCRWIYTVKVGPTGKIDRLKARLVAKGYTQVYGQ 60

Query: 1855 DYFETFSPTARMNSIRVLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGE 2034
            DY +TFSP A+ +S+R+  ++A  + WP+YQLD+KNAFL+GDL E ++MEQPPG+VAQGE
Sbjct: 61   DYCDTFSPVAKTSSVRIFLAMAAIRHWPLYQLDIKNAFLHGDLEEEIYMEQPPGFVAQGE 120

Query: 2035 NATMVCKLKKAIYGLKQSPRAWFDKFSNILGAVDFKQCKSDHFVFVRH-STNGXXXXXXX 2211
            +  +VCKL++++YGLKQSPRAWF KFS ++     K+C++DH VF  H S +        
Sbjct: 121  SG-LVCKLRRSLYGLKQSPRAWFGKFSQVVQKFGLKRCEADHSVFYGHYSPDKCVSLMVY 179

Query: 2212 XXXXXXSGSDIRGIDEVKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLL 2391
                  +G+DI  I+++K +L  HF TKD+GR KYFLGIE+A SK GV + QRKYA D+L
Sbjct: 180  VDDIVITGNDITRINQLKNHLFNHFQTKDLGRLKYFLGIEVAQSKEGVIISQRKYALDIL 239

Query: 2392 KETGLLGTKPVDTPMDINPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVS 2571
            +ETGL   KP+D PMD N  +  D GE F D  +YRRLVGKLIYLT+TRPD+S+ VG+VS
Sbjct: 240  EETGLTNCKPIDNPMDPNQKLMTDQGEPFSDPERYRRLVGKLIYLTITRPDLSYPVGVVS 299

Query: 2572 RFMDKPKQVHWDAAIRILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGY 2751
            +FM  P   HW+A +RILRYIK SPG+GL ++  G+ + E Y DAD+AGS  DRRST+GY
Sbjct: 300  QFMQNPHVDHWNAVLRILRYIKGSPGQGLLYENKGNTRIEGYCDADWAGSPIDRRSTTGY 359

Query: 2752 CTYIGGNLVTWRSKKQTTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYC 2931
            C  +GGNLV+W+SKKQ  VARS+AEAEYR+M  T  E++W+K LL+EL F  NE + +YC
Sbjct: 360  CVLLGGNLVSWKSKKQNVVARSSAEAEYRSMTLTTCELVWIKQLLQELKFCENEQMKLYC 419

Query: 2932 DNQAAIHIASNPVFHERTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKR 3111
            DNQAA+HI+SNPVFHERTKHIE+DCHFIRE+++++++ T F +S+ Q+ ++ TK+L G R
Sbjct: 420  DNQAALHISSNPVFHERTKHIEIDCHFIREKLLSKELVTEFVNSNEQLGDMLTKSLRGPR 479

Query: 3112 FSELCDKLDMIDIYAPA 3162
               +C KL   D+YAPA
Sbjct: 480  IQFICSKLGAYDLYAPA 496


>gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1378

 Score =  619 bits (1595), Expect = 0.0
 Identities = 291/541 (53%), Positives = 398/541 (73%), Gaps = 1/541 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L P + +F  S+SS  +P + ++A  H  WR AM  EM AL S GTWEL
Sbjct: 839  HPIYNFLSYHRLSPSYFSFVSSLSSITIPKNINDALAHPGWRQAMVVEMQALESSGTWEL 898

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  PP    V CRWV+ +K   DG +DR KARLVAKG+TQ YG+DY +TFSP A++ S+R
Sbjct: 899  VPLPPGKKTVGCRWVYAIKVGPDGKLDRLKARLVAKGYTQIYGLDYGDTFSPVAKVTSVR 958

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +  ++A  + WP++QLD+KNAFL+GDL E ++MEQPPG+VAQGE   +VCKL++++YGLK
Sbjct: 959  LFLAMAAIRHWPLHQLDIKNAFLHGDLEEEIYMEQPPGFVAQGE-CGLVCKLRRSLYGLK 1017

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXX-SGSDIRGIDE 2259
            QSPRAWF KFS+++ +    + ++DH VF  H+++G              +G+D   I +
Sbjct: 1018 QSPRAWFGKFSHVVQSFGLNRSEADHSVFYCHTSSGKCVYLIVYVDDIVITGNDSVKISQ 1077

Query: 2260 VKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMD 2439
            +K++L  HF TKD+G  KYFLGIE+A SK G+ + QRKYA D+L+ETG++  KP+D+PMD
Sbjct: 1078 LKRHLVSHFETKDLGYLKYFLGIEVAQSKEGIVISQRKYALDILEETGMINCKPIDSPMD 1137

Query: 2440 INPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIR 2619
             N  +  D+GE F D  +YRRLVGKLIYLT+TRPDISFAVG+VS+FM  P   HW+A I 
Sbjct: 1138 PNKKLVADHGEPFSDPERYRRLVGKLIYLTITRPDISFAVGVVSQFMQAPYIDHWNAVIH 1197

Query: 2620 ILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQ 2799
            ILRYIKK+PG+GL ++  G  +   Y DAD+AGS  DRRST+GYC +IGGN+++W+SKKQ
Sbjct: 1198 ILRYIKKNPGQGLLYEDKGSTQISGYCDADWAGSPIDRRSTTGYCVFIGGNIISWKSKKQ 1257

Query: 2800 TTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHE 2979
              VA+S+AEAEYRAMA    E++W+K LL+EL F   + + +YCDNQAA+HIASNPVFHE
Sbjct: 1258 NVVAQSSAEAEYRAMATATCELIWIKQLLQELKFCDVKQMKLYCDNQAALHIASNPVFHE 1317

Query: 2980 RTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAP 3159
            RTKHIE+DCHF+R+++++++I T FTSS++Q+A++ TK+L G R   +C KL   D+YAP
Sbjct: 1318 RTKHIEIDCHFVRQKLLSKEIGTEFTSSNDQLADILTKSLRGPRIKFICSKLGAYDLYAP 1377

Query: 3160 A 3162
            A
Sbjct: 1378 A 1378



 Score =  342 bits (878), Expect(2) = e-111
 Identities = 159/291 (54%), Positives = 217/291 (74%), Gaps = 4/291 (1%)
 Frame = +3

Query: 441  SPYQWHCRLGHPSPSSLKCLVP----VQSIDFQCESCEFGKHHRTSFPSRVDKRSSFAFE 608
            +P   H RLGHP  + LK +VP    +Q+++  CESC+ GKH R+SFP R + R + AF 
Sbjct: 446  TPKLLHDRLGHPHLTKLKKMVPSLNKLQALE--CESCQLGKHVRSSFPKRTETRCNSAFS 503

Query: 609  LVHCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSI 788
            ++H D+WGPS+V S G F+YF+ F+D+YSR TW+YL+K+RSE+  +  SF +EIK Q+  
Sbjct: 504  IIHSDIWGPSRVTSFG-FRYFVTFIDEYSRCTWIYLMKDRSELLSIFMSFCNEIKNQFGK 562

Query: 789  DLRTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCH 968
             ++ LR+DNA E+    +++F  ++GI+HQ++C +T QQNG+AERK+RH+++ ARTLL  
Sbjct: 563  IIKVLRSDNAKEYFSSDLTSFLTTYGILHQSTCPHTPQQNGIAERKNRHLVETARTLLLS 622

Query: 969  MNVPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFT 1148
             NVP + WGDA LTACFLINRMPS+ L   IP+S L P++PLFH+ PR+FGCVCFVH+ +
Sbjct: 623  TNVPVHHWGDAILTACFLINRMPSSSLDNKIPYSILFPNEPLFHVSPRVFGCVCFVHDLS 682

Query: 1149 PGLDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFS 1301
            PGLDKLS ++IKC+ LGYSR QKGYRC  P T+R Y  ADVTFFE   +FS
Sbjct: 683  PGLDKLSARAIKCVFLGYSRLQKGYRCYSPDTRRYYMSADVTFFEDTSFFS 733



 Score = 91.7 bits (226), Expect(2) = e-111
 Identities = 49/124 (39%), Positives = 72/124 (58%)
 Frame = +2

Query: 65  WMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTYSPITGTGVVRPTTNITLDNVLFA 244
           W++DSGA+ H++GN               + LA+G+     G G V  T ++ L +VLF 
Sbjct: 323 WIIDSGASDHMSGNNSLFSSISLPKVPHFITLANGSKVASQGVGQVSLTPSLNLKSVLFV 382

Query: 245 PKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKRMIGGGHERDGLFYLDSVTPASSR 424
           PK   +L+S+S+LTK+ NCSVTF  +  + Q+  T R+IGGGHE  GL+Y ++    S  
Sbjct: 383 PKCAFNLISLSKLTKSLNCSVTFDANSFVIQERGTGRLIGGGHESRGLYYFETSPSVSCF 442

Query: 425 ALST 436
           A ST
Sbjct: 443 ASST 446


>emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
          Length = 2077

 Score =  397 bits (1020), Expect(2) = 0.0
 Identities = 218/496 (43%), Positives = 287/496 (57%), Gaps = 1/496 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L   +  F  ++SS  +P S SEA  H  W+ AM +EM AL   GTW+L
Sbjct: 1008 HPIYNFLSYHRLXSSYYAFVSTLSSVFLPKSTSEALSHPGWQQAMVDEMVALHFNGTWDL 1067

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V+ PP    + CRWV+T+K   DG +DR KARLVAKG+TQ Y  DY +TFSP A++ S  
Sbjct: 1068 VSLPPGKSTIGCRWVYTVKVGPDGQVDRLKARLVAKGYTQIYCCDYGDTFSPVAKIAS-- 1125

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
                                          V+MEQ PG+VAQGE+  +VCKL+ ++YGLK
Sbjct: 1126 -----------------------------EVYMEQXPGFVAQGESG-LVCKLRXSLYGLK 1155

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRH-STNGXXXXXXXXXXXXXSGSDIRGIDE 2259
             S    F  F +          ++DH VF  H S++               GSD  GI  
Sbjct: 1156 YSXVQEFGMFRS----------EADHSVFYHHNSSSQCIYLVVYVDDIVIXGSDQEGIQR 1205

Query: 2260 VKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMD 2439
            +K++L  HF TKD+G+ K FLG+EIA   SGV + QRKY  D+L+ETG+L  K VDTPM+
Sbjct: 1206 LKQHLFNHFQTKDLGKLKCFLGLEIAQYSSGVVMSQRKYXLDILEETGMLECKLVDTPMN 1265

Query: 2440 INPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIR 2619
             N  +    GE   D  +Y+ L                           P   HWDA IR
Sbjct: 1266 PNVKLVPGZGESLRDPGRYQXL--------------------------SPCXNHWDAVIR 1299

Query: 2620 ILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQ 2799
            ILRYIK + G+G+ ++  GH +   Y D D+AGS  DRR  SGYC +IGGNL++W+SKKQ
Sbjct: 1300 ILRYIKGTLGQGMLYENRGHTQIVGYIDVDWAGSPLDRRFISGYCVFIGGNLISWKSKKQ 1359

Query: 2800 TTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHE 2979
              VARS+AEAEYR MA    E++WL+ LL++L F  +E + + CDN+ A+HIASNPVFHE
Sbjct: 1360 DVVARSSAEAEYRVMALATCELIWLRQLLQKLRFGKDEQIKLVCDNRIALHIASNPVFHE 1419

Query: 2980 RTKHIEVDCHFIRERV 3027
            RTKHIEVDCHFIRE++
Sbjct: 1420 RTKHIEVDCHFIREKI 1435



 Score =  325 bits (833), Expect(2) = 0.0
 Identities = 167/357 (46%), Positives = 220/357 (61%), Gaps = 11/357 (3%)
 Frame = +3

Query: 414  HLPEPSQQMS------PYQWHCRLGHPSPSSLKCLVPVQSI--DFQCESCEFGKHHRTSF 569
            HL  PS   +      P   H RL HPS S  + +VP  S      CESC+ GK+    F
Sbjct: 623  HLTSPSSPAACIFTDAPLLIHNRLDHPSLSKFQKMVPRFSTLSSLACESCQLGKYTHVLF 682

Query: 570  PSRVDKRSSFAFELVHCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVL 749
            P  ++ R+   FELVH DVWGP ++ S  GFQYF+  +DDYSR TWL+L+KN++E+  + 
Sbjct: 683  PKCLNNRAKSLFELVHTDVWGPCRIASTLGFQYFVTLIDDYSRCTWLFLMKNQNELFSIF 742

Query: 750  KSFHHEIKTQYSIDLRTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKH 929
            + F+ +I+TQ+++ +R LR+DNA E+     ++F + HGI+HQ+SC +T QQNGV ERK+
Sbjct: 743  QKFYAKIQTQFNVSIRVLRSDNAREYFSTPFTSFMSQHGILHQSSCAHTPQQNGVVERKN 802

Query: 930  RHILDVARTLLCHMNVPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPP 1109
            RH+++ ARTLL H +VP   WG+A LT  +LINRMPS++LH  IP S + P +PL+ LPP
Sbjct: 803  RHLIETARTLL-HSHVPFRFWGNAVLTTYYLINRMPSSILHDQIPHSLIFPAQPLYFLPP 861

Query: 1110 RIFGCVCFVHNFTPGLDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQ 1289
            R+FG  CFVH  TPG DKLS ++ KCI LGYSR QKGYRC  P T R +  ADVTFFE  
Sbjct: 862  RVFGYTCFVHTLTPGQDKLSTKAKKCIFLGYSRLQKGYRCYSPDTHRYFLFADVTFFEDS 921

Query: 1290 PYFSPNPVQPSXXXXXXXXXXXXXXXXXXXXXXXKPLQVYTRRSR---PELGSCPSP 1451
            P+FS +   P                        +PLQVY RR R   P L S   P
Sbjct: 922  PFFSSSESFP------ISEVLSLPYISPSSDALSRPLQVYHRRHRAIAPPLSSAEVP 972



 Score = 82.4 bits (202), Expect = 3e-12
 Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
 Frame = +2

Query: 5   SPSTIAASSTGAFVVSHGKS-----WMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADG 169
           S S  + + TG   V   +S     W+LDSGA+ HI+GNK              V LA+G
Sbjct: 489 SASVTSVAQTGNVSVCFTQSPSLNPWILDSGASDHISGNKHIFSSITTTSALPTVTLANG 548

Query: 170 TYSPITGTGVVRPTTNITLDNVLFAPKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQT 349
           +     G G+  P   + L   L+AP+ P +L+SIS++T T NC + F     I QD  T
Sbjct: 549 SQIMAKGIGLAHPLPFLPLHFFLYAPECPFNLISISKITHTLNCFIIFSDKSVILQDRST 608

Query: 350 KRMIGGGHERDGLFYLDSVTPASSRA 427
            + IG G E  GL++L S  P+S  A
Sbjct: 609 GKTIGIGRESQGLYHLTS--PSSPAA 632


>emb|CAN70689.1| hypothetical protein VITISV_012155 [Vitis vinifera]
          Length = 1199

 Score =  611 bits (1575), Expect = 0.0
 Identities = 296/537 (55%), Positives = 388/537 (72%), Gaps = 1/537 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L   +  F  +ISS  +P S  EA  H  WR AM +EM+AL S GTW+L
Sbjct: 278  HPIYNFLSYHRLSSPYSAFVSAISSVSLPKSTHEALSHPGWRQAMVDEMAALHSNGTWDL 337

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  P     V CRWV+ +K   DG +DR KARLVAKG+TQ YG DY +TFSP A++ S+R
Sbjct: 338  VVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFSPVAKIASVR 397

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +L S+A   SWP+YQLD+KNAFL+GDL E V+MEQPPG+VAQGE+  +VC+L++++YGLK
Sbjct: 398  LLLSMAAMCSWPLYQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESG-LVCRLRRSLYGLK 456

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXX-SGSDIRGIDE 2259
            QSPRAWF +FS+++      +  +DH VF  H++ G              +GSD  GI +
Sbjct: 457  QSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQK 516

Query: 2260 VKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMD 2439
            +K++L  HF TKD+G+ KYFLGIEIA S SGV L QRKYA D+L+ETG+L  KPVDTPMD
Sbjct: 517  LKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMD 576

Query: 2440 INPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIR 2619
             N  +    GE   D  +YRRLVGKL YLT+TRPDISF V +VS+F+  P   HWDA IR
Sbjct: 577  PNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIR 636

Query: 2620 ILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQ 2799
            ILRYIK +PG+G+ ++  GH +   Y+DAD+AGS  DRRSTSGYC +IGGNL++W+SKKQ
Sbjct: 637  ILRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQ 696

Query: 2800 TTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHE 2979
              VARS+AEAEYRAMA    E++WL++LL+EL F  +E + + CDNQAA+HIASNPVFHE
Sbjct: 697  DVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHE 756

Query: 2980 RTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDI 3150
            RTKHIEVDCHFIRE++ +  ++T F +S++Q+A++FTK+L G R   +C+KL   D+
Sbjct: 757  RTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDV 813



 Score =  243 bits (620), Expect = 1e-62
 Identities = 119/236 (50%), Positives = 155/236 (65%)
 Frame = +3

Query: 717  LKNRSEVPDVLKSFHHEIKTQYSIDLRTLRTDNALEFTQKTISTFCASHGIIHQTSCLYT 896
            +KNR+E+  + + F+ EI+TQ++I +R LR+DNA E+     ++F + HGI+HQ+SC +T
Sbjct: 1    MKNRAELFSIFQKFYTEIQTQFNISIRVLRSDNAREYFSAQFTSFMSHHGILHQSSCAHT 60

Query: 897  SQQNGVAERKHRHILDVARTLLCHMNVPKYLWGDAALTACFLINRMPSTVLHGDIPFSCL 1076
             QQNGV ERK+RH+++ ARTLL H +VP   WGD  LTAC+LIN MPS+VLH  IP S L
Sbjct: 61   PQQNGVXERKNRHLVETARTLLLHSHVPFRFWGDXVLTACYLINHMPSSVLHDQIPHSLL 120

Query: 1077 HPDKPLFHLPPRIFGCVCFVHNFTPGLDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCY 1256
             PD+PL+ LP R+FGC CFVH  TPG DKLS +++KC+ LGYSR QKGYRC    T R +
Sbjct: 121  FPDQPLYFLPXRVFGCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYF 180

Query: 1257 TCADVTFFESQPYFSPNPVQPSXXXXXXXXXXXXXXXXXXXXXXXKPLQVYTRRSR 1424
              ADVTFFE  P+FS      +                       +PLQVY RR R
Sbjct: 181  ISADVTFFEDSPFFS-----TTSESLPVSEVLPIPIVSPPDXMPPRPLQVYHRRPR 231


>gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1371

 Score =  614 bits (1584), Expect = 0.0
 Identities = 289/541 (53%), Positives = 391/541 (72%), Gaps = 1/541 (0%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L P++C+F  SIS   +P +  EA  H  WR AM  EM AL   GTWEL
Sbjct: 832  HPIYNFLSYHRLSPLYCSFISSISPLTIPKNVHEALDHPGWRQAMIAEMQALEHSGTWEL 891

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  PP    V CRWV+ +K   DGT+DR KARLVAKG+TQ YG+DY +TFSP A++ ++R
Sbjct: 892  VPLPPGKQPVGCRWVYAIKVGPDGTVDRLKARLVAKGYTQIYGLDYGDTFSPVAKIPTVR 951

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +  ++A  + WP++QLD+KNAFL+G+L E ++MEQPPG+VAQGE+  +VC+L++++YGLK
Sbjct: 952  LFLAMAAIRHWPLHQLDIKNAFLHGELEEEIYMEQPPGFVAQGESG-LVCRLRRSLYGLK 1010

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXX-SGSDIRGIDE 2259
            QSPRAWF KFS+++     K+ ++DH VF  H++ G              +G+D   I +
Sbjct: 1011 QSPRAWFGKFSHVVQNFGLKRSEADHSVFYCHTSPGRCVYLIVYVDDIVITGNDATTISQ 1070

Query: 2260 VKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMD 2439
            +KK+L   F TKD+G  +YFLGIE+A SK G+ + QRKYA D+LKETG+L  KP+D+PMD
Sbjct: 1071 LKKHLFSQFQTKDLGHLRYFLGIEVAQSKEGIVISQRKYAIDILKETGMLDCKPIDSPMD 1130

Query: 2440 INPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIR 2619
             N  +  D GE F D  +YRRLVGKLIYLT+TRPD+SFAVG+VS+FM  P   HW+A +R
Sbjct: 1131 PNQKLMADQGELFTDPERYRRLVGKLIYLTITRPDLSFAVGIVSQFMQAPHIDHWNAVLR 1190

Query: 2620 ILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQ 2799
            ILRYIKK+PG+GL ++  G  +   Y DAD+AG   DRRST+GYC ++GGNL++W+SKKQ
Sbjct: 1191 ILRYIKKAPGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGYCVFLGGNLISWKSKKQ 1250

Query: 2800 TTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHE 2979
              VARS+ EA+YRAMA    E++W+K LL+EL F    P+ +YCDNQ A+HIASNPVFHE
Sbjct: 1251 NVVARSSVEAKYRAMALITCELMWIKQLLQELKFCEGHPMKLYCDNQVALHIASNPVFHE 1310

Query: 2980 RTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAP 3159
            RTKHIEVDCHF+RE++++++I T F +S+ Q+A+V TK+L G R   LC KL   ++YA 
Sbjct: 1311 RTKHIEVDCHFVREKLLSKEIVTKFVTSNEQLADVMTKSLRGPRIQFLCSKLGAYNLYAS 1370

Query: 3160 A 3162
            A
Sbjct: 1371 A 1371



 Score =  338 bits (868), Expect(2) = e-110
 Identities = 154/289 (53%), Positives = 211/289 (73%), Gaps = 2/289 (0%)
 Frame = +3

Query: 438  MSPYQWHCRLGHPSPSSLKCLVPVQSI--DFQCESCEFGKHHRTSFPSRVDKRSSFAFEL 611
            + P   H RLGHPS S LK LVP      +  CESC+ GKH R+SFP + +KR +  F  
Sbjct: 439  LPPKLLHDRLGHPSLSKLKLLVPSLKTLEELGCESCQLGKHVRSSFPKQTEKRCNSVFTT 498

Query: 612  VHCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSID 791
            +H D+WGPS+V S G F+YF+ F+D++SR TW+YL+K+RSE+  +  SF +EI+ Q+   
Sbjct: 499  IHSDIWGPSRVTSFG-FRYFVTFIDEFSRCTWVYLMKDRSELLSIFVSFFNEIQNQFGKT 557

Query: 792  LRTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHM 971
            ++  R+DNA E+    +S+F +S G++HQ++C +T QQNG+AERK+RH+++ ARTL+ + 
Sbjct: 558  IKIFRSDNAKEYFSLELSSFLSSQGVLHQSTCPHTPQQNGIAERKNRHLVETARTLMLNA 617

Query: 972  NVPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTP 1151
            NVP + WGDA LTACFLINRMPS+ L   IP+S + P +PLFH+ PR+FGC CFVH+ +P
Sbjct: 618  NVPVHHWGDAILTACFLINRMPSSSLENKIPYSIIFPKEPLFHVSPRVFGCTCFVHDVSP 677

Query: 1152 GLDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYF 1298
            GLDKLS ++IKC+ LGYSR QKGY+C  P TK+ Y  ADVTFFE  P+F
Sbjct: 678  GLDKLSARAIKCVFLGYSRLQKGYKCYSPKTKKFYMSADVTFFEHTPFF 726



 Score = 92.4 bits (228), Expect(2) = e-110
 Identities = 52/130 (40%), Positives = 70/130 (53%)
 Frame = +2

Query: 5   SPSTIAASSTGAFVVSHGKSWMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTYSPI 184
           S  TI+ +       S    W++DSGA+ HI GN               + LADG+    
Sbjct: 298 STPTISTACISQLTASQSP-WIIDSGASDHIAGNDSLFLSMSSLKSPHLITLADGSKIAP 356

Query: 185 TGTGVVRPTTNITLDNVLFAPKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKRMIG 364
            G G V  +  + L +VLF PK P +L+S+SQLTK+ NCSVTF    C+ Q+  T +MIG
Sbjct: 357 KGIGQVSLSPMLNLKSVLFVPKCPFNLISLSQLTKSLNCSVTFNAESCVIQERGTGKMIG 416

Query: 365 GGHERDGLFY 394
            GHE  GL+Y
Sbjct: 417 VGHEFGGLYY 426


>gb|KYP76032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1355

 Score =  613 bits (1582), Expect = 0.0
 Identities = 293/546 (53%), Positives = 393/546 (71%), Gaps = 1/546 (0%)
 Frame = +1

Query: 1528 SFCTTHPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISR 1707
            S C  HP+ N +S+  L P +  F  +ISS  +P +  EA  H  WR AM +EM+AL S 
Sbjct: 811  STCNPHPIYNFLSYHRLSPTYYAFVSAISSITIPKTVQEALTHPGWRQAMIDEMTALDSN 870

Query: 1708 GTWELVTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTAR 1887
             TW LV  P    +V C+WVF +K   DG ++R KARLVA G+TQ YG+DY +TFSP A+
Sbjct: 871  HTWVLVPPPLEKSVVGCQWVFNVKVGPDGQVNRLKARLVANGYTQVYGLDYSDTFSPVAK 930

Query: 1888 MNSIRVLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKA 2067
            M S+R+  ++A  + WP++QLD+KNAFL+GDL E ++M+QPPG+VAQG +  +VCKL+K+
Sbjct: 931  MASVRLFLAMAAMRHWPLFQLDIKNAFLHGDLEEEIYMDQPPGFVAQGGSG-LVCKLQKS 989

Query: 2068 IYGLKQSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHS-TNGXXXXXXXXXXXXXSGSDI 2244
            +YGLKQSPRAWF +FS ++      +C++DH VF R S T+              +G D 
Sbjct: 990  LYGLKQSPRAWFGRFSKVIQEFGMIRCETDHSVFFRRSSTHRFIYLVVYVDDIVITGDDQ 1049

Query: 2245 RGIDEVKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPV 2424
             GI  +K++L +HF TKD+G  +YFLGIE+A SKSG+++ QRKYA D+L+ETGL   KPV
Sbjct: 1050 EGIKALKQHLFKHFQTKDLGPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLTDCKPV 1109

Query: 2425 DTPMDINPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHW 2604
            DTPMD N  +  + GE + D  +YRRLVGKL YLT+TRPDISF V +VS+F++ P + HW
Sbjct: 1110 DTPMDPNVKLMPNQGEPYPDPGRYRRLVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHW 1169

Query: 2605 DAAIRILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTW 2784
             A +RILRYIK+SPGKGL +   GH     YSDAD+AG  +DRRSTSGYC ++GGNLV+W
Sbjct: 1170 LAVVRILRYIKRSPGKGLVYNDRGHTNIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSW 1229

Query: 2785 RSKKQTTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASN 2964
            +SKKQ+ VARS+ EAEYRAMAHT  E+LWLK L++EL F     + + CDNQ+A++++SN
Sbjct: 1230 KSKKQSVVARSSTEAEYRAMAHTTCELLWLKFLIQELQFCKVGHMELVCDNQSALYLSSN 1289

Query: 2965 PVFHERTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMI 3144
            PVFHERTKHIEVDCHFIRE++++  I T    S +Q+A++FTK+L G R + +C+KLD+ 
Sbjct: 1290 PVFHERTKHIEVDCHFIREKILSDIIKTSSVCSKDQLADIFTKSLRGPRITYICNKLDVY 1349

Query: 3145 DIYAPA 3162
            DIYAPA
Sbjct: 1350 DIYAPA 1355



 Score =  346 bits (887), Expect(2) = e-112
 Identities = 163/295 (55%), Positives = 211/295 (71%), Gaps = 2/295 (0%)
 Frame = +3

Query: 441  SPYQWHCRLGHPSPSSLKCLVPVQS--IDFQCESCEFGKHHRTSFPSRVDKRSSFAFELV 614
            SP   H RLGHPS + LK +VP  S  +  +CESC+ GKH R SFP+ ++ R+   F+++
Sbjct: 420  SPGLIHRRLGHPSLNKLKKMVPHLSRLVSLECESCQLGKHVRASFPNSINSRAMSPFDVI 479

Query: 615  HCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSIDL 794
            H DVWGPS++ S  G +Y++ F+DD+SR TW++L+KNRSE+ ++  SF+ EIKTQ+   +
Sbjct: 480  HSDVWGPSRIPSLLGHRYYVTFIDDFSRCTWIFLMKNRSELFNIFLSFYSEIKTQFGKVI 539

Query: 795  RTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHMN 974
            R LR+DNA E+      +F ASHGI+HQ+SC +T QQNGVAERKHRHI+D ARTLL + N
Sbjct: 540  RILRSDNAKEYFSDCFKSFMASHGILHQSSCPHTPQQNGVAERKHRHIVDTARTLLLNAN 599

Query: 975  VPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTPG 1154
             P  LWGDA LTA +LINRMPS+VL+  +P S L+P  PL+ + PR+FGC CFVH+   G
Sbjct: 600  APPKLWGDAVLTAGYLINRMPSSVLNDQVPHSLLYPLDPLYSVHPRVFGCTCFVHDLFSG 659

Query: 1155 LDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFSPNPVQP 1319
              KLS ++IKC+ LGYSR QKGYRC  P T R YT ADVTFFE  PYF    V P
Sbjct: 660  RAKLSARAIKCVFLGYSRVQKGYRCYSPATHRFYTSADVTFFEDTPYFIATDVSP 714



 Score = 91.3 bits (225), Expect(2) = e-112
 Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
 Frame = +2

Query: 5   SPSTIAASSTGAFVVSHGKS---WMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTY 175
           S  T+A +      +SH  S   W+LDSGA+ H+TGN               + LADG+ 
Sbjct: 274 SSITVAHTGNSTVCLSHSTSIGPWVLDSGASDHLTGNVSLFPNLSSPKTPHHITLADGSK 333

Query: 176 SPITGTGVVRPTTNITLDNVLFAPKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKR 355
              TG G + P  ++ L +VL  P  P +L+SIS+LT++ NC +TF     + QD  T +
Sbjct: 334 VQATGIGQISPLPSLPLKSVLLVPGCPFNLISISKLTRSLNCVITFTSDSFLIQDRSTGQ 393

Query: 356 MIGGGHERDGLFYLDSVT 409
            IG G E  GL+YL   T
Sbjct: 394 TIGAGSESHGLYYLQPST 411


>emb|CAN61207.1| hypothetical protein VITISV_015446 [Vitis vinifera]
          Length = 900

 Score =  594 bits (1532), Expect = 0.0
 Identities = 292/540 (54%), Positives = 380/540 (70%)
 Frame = +1

Query: 1543 HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWEL 1722
            HP+ N +S+  L   +  F  +ISS  +P S  EA  H  WR AM +EM+AL S GTW+L
Sbjct: 377  HPIYNFLSYHRLSSPYSAFVSAISSVSLPKSTHEALSHPGWRXAMVDEMAALHSNGTWDL 436

Query: 1723 VTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIR 1902
            V  P     V CRWV+ +K   DG +DR KARLVAKG+TQ YG DY +TFSP A++ S+R
Sbjct: 437  VVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFSPVAKIASVR 496

Query: 1903 VLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLK 2082
            +L S+A   SWP+YQLD+KNAFL+GDL E V+MEQPPG+VAQGE+  +VC+L++++YGLK
Sbjct: 497  LLLSMAAMCSWPLYQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESG-LVCRLRRSLYGLK 555

Query: 2083 QSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXXXXXXXSGSDIRGIDEV 2262
            QSPRAWF +FS+++      +  +DH VF  H++ G                 I G D+ 
Sbjct: 556  QSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIV----ITGSDQ- 610

Query: 2263 KKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMDI 2442
                       D+G+ KYFLGIEIA S SGV L QRKYA D+L+ETG+L  KPVDTPMD 
Sbjct: 611  ----------DDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDP 660

Query: 2443 NPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIRI 2622
            N  +    GE   D  +YRRLVGKL YLT+TRPDISF V +VS+F+  P   HWDA IRI
Sbjct: 661  NVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRI 720

Query: 2623 LRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQT 2802
            LRYIK +PG+G+ ++  GH +   Y+DAD+AGS  DRRSTSGYC +IGGNL++W+SKKQ 
Sbjct: 721  LRYIKSTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQD 780

Query: 2803 TVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHER 2982
             VARS+AEAEYRAMA    E++WL++LL+EL F  +E + + CDNQAA+HIASNPVFHER
Sbjct: 781  VVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHER 840

Query: 2983 TKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAPA 3162
            TKHIEVDCHFIRE++ +  ++T F +S++Q+A++FTK+L G R   +C+KL   D+YAPA
Sbjct: 841  TKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAPA 900



 Score =  162 bits (410), Expect = 3e-37
 Identities = 83/162 (51%), Positives = 97/162 (59%)
 Frame = +3

Query: 939  LDVARTLLCHMNVPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIF 1118
            LD     L H +VP   WGDA LTAC+LINRMPS+VLH  IP S L PD+PL+ LPPR+F
Sbjct: 174  LDDVFARLLHSHVPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVF 233

Query: 1119 GCVCFVHNFTPGLDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYF 1298
            GC CFVH  TPG DKLS +++KC+ LGYSR QKGYRC    T R +  ADVTFFE  P+F
Sbjct: 234  GCTCFVHILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYFISADVTFFEDSPFF 293

Query: 1299 SPNPVQPSXXXXXXXXXXXXXXXXXXXXXXXKPLQVYTRRSR 1424
            S      +                       +PLQVY RR R
Sbjct: 294  S-----TTSESLPVSEVLPIPIVSPPDAMPPRPLQVYHRRPR 330


>emb|CAN72018.1| hypothetical protein VITISV_001841 [Vitis vinifera]
          Length = 1225

 Score =  603 bits (1556), Expect = 0.0
 Identities = 293/523 (56%), Positives = 381/523 (72%), Gaps = 1/523 (0%)
 Frame = +1

Query: 1597 FAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALISRGTWELVTAPPLADIVACRWVFTL 1776
            F+ +  S  V  S  EA  H  WR AM +EM+AL S GTW+LV  P     V CRWV+ +
Sbjct: 704  FSTTXESLPVSESTHEALSHPGWRQAMVDEMAALHSNGTWDLVVLPSGKSTVGCRWVYAV 763

Query: 1777 KYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTARMNSIRVLFSLAVNQSWPMYQLDV 1956
            K   DG +DR KARLVAKG+TQ YG DY +TFSP A++ S+R+L S+A   SWP+YQLD+
Sbjct: 764  KVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFSPVAKIASVRLLLSMAAMCSWPLYQLDI 823

Query: 1957 KNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKKAIYGLKQSPRAWFDKFSNILGAVD 2136
            KNAFL+GDL E V+MEQPPG+VAQGE+  +VC+L++++YGLKQSPRAWF +FS+++    
Sbjct: 824  KNAFLHGDLAEEVYMEQPPGFVAQGESG-LVCRLRRSLYGLKQSPRAWFSRFSSVVQEFG 882

Query: 2137 FKQCKSDHFVFVRHSTNGXXXXXXXXXXXXX-SGSDIRGIDEVKKYLQQHFVTKDMGRPK 2313
              +  +DH VF  H++ G              +GSD  GI ++K++L  HF TKD+G+ K
Sbjct: 883  MLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLK 942

Query: 2314 YFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKPVDTPMDINPSVWDDNGEFFEDKAK 2493
            YFLGIEIA S SGV L QRKYA D+L+ETG+L  KPVDTPMD N  +    GE   D  +
Sbjct: 943  YFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGR 1002

Query: 2494 YRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVHWDAAIRILRYIKKSPGKGLSFKRN 2673
            YRRLVGKL YLT+TRPDISF V +VS+F+  P   HWDA IRILRYIK +PG+G+ ++  
Sbjct: 1003 YRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYIKSTPGQGVLYENR 1062

Query: 2674 GHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVTWRSKKQTTVARSTAEAEYRAMAHT 2853
            GH +   Y+DAD+AGS  DRRSTSGYC +IGGNL++W+SKKQ  VARS+AEAEYRAMA  
Sbjct: 1063 GHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALA 1122

Query: 2854 VTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIASNPVFHERTKHIEVDCHFIRERVMN 3033
              E++WL++LL+EL F  +E + + CDNQAA+HIASNPVFHERTKHIEVDCHFIRE++ +
Sbjct: 1123 TCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDCHFIREKIAS 1182

Query: 3034 QKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDMIDIYAPA 3162
              ++T F +S++Q+A++FTK+L G R   +C+KL   D+YAPA
Sbjct: 1183 GCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAPA 1225



 Score =  348 bits (892), Expect = 1e-98
 Identities = 163/289 (56%), Positives = 207/289 (71%), Gaps = 2/289 (0%)
 Frame = +3

Query: 441  SPYQWHCRLGHPSPSSLKCLVPVQSI--DFQCESCEFGKHHRTSFPSRVDKRSSFAFELV 614
            +P   H RLGHPS S  + +VP  S      CESC+ GKH R SFP R++ R    FELV
Sbjct: 417  APLLIHNRLGHPSLSKFQKMVPRFSTLSSLPCESCQLGKHTRVSFPKRLNNRXKSPFELV 476

Query: 615  HCDVWGPSKVESRGGFQYFIIFVDDYSRMTWLYLLKNRSEVPDVLKSFHHEIKTQYSIDL 794
            H DVWGP +  S  GFQYF+ F+DDYSR TWL+L+KNR+E+  + + F+ EI+TQ++I +
Sbjct: 477  HTDVWGPCRTASTLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYTEIQTQFNISI 536

Query: 795  RTLRTDNALEFTQKTISTFCASHGIIHQTSCLYTSQQNGVAERKHRHILDVARTLLCHMN 974
            R LR+DNA E+     ++F + HGI+HQ+SC +T QQ GVAERK+RH+++ ARTLL H +
Sbjct: 537  RVLRSDNAREYFSAQFTSFMSHHGILHQSSCAHTPQQXGVAERKNRHLVETARTLLLHSH 596

Query: 975  VPKYLWGDAALTACFLINRMPSTVLHGDIPFSCLHPDKPLFHLPPRIFGCVCFVHNFTPG 1154
            VP   WGDA LTAC+LINRMPS+VLH  IP S L PD+PL+ LPPR+FGC CFVH  TPG
Sbjct: 597  VPFRFWGDAVLTACYLINRMPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPG 656

Query: 1155 LDKLSPQSIKCIMLGYSRTQKGYRCLDPLTKRCYTCADVTFFESQPYFS 1301
             DKLS +++KC+ LGYSR QKGYRC    T R +  A VTFFE  P+FS
Sbjct: 657  QDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYFISAXVTFFEXSPFFS 705



 Score = 91.7 bits (226), Expect = 4e-15
 Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
 Frame = +2

Query: 5   SPSTIAASSTGAFVVSHGKS---WMLDSGATAHITGNKXXXXXXXXXXXXXPVRLADGTY 175
           S +++A     +  ++H  S   W+LDSGA+ H++GNK              V LA+G+ 
Sbjct: 270 SIASVAQPGNASACLTHTSSLGPWILDSGASDHLSGNKDLFSSITTTSDLPTVTLANGSQ 329

Query: 176 SPITGTGVVRPTTNITLDNVLFAPKFPVSLLSISQLTKTHNCSVTFYPSYCIFQDLQTKR 355
           +   G G+  P  ++ L +VL+ P+ P +L+SIS++T+T NCS+TF   +   QD  T +
Sbjct: 330 TVAKGIGLALPLPSLPLTSVLYTPECPFNLISISKITRTLNCSITFSDKFVTLQDRSTGK 389

Query: 356 MIGGGHERDGLFYLDSVTPASSRALSTNVSLSV----ALSSWSPFSFLPQMFSSCS 511
            IG G E  GL++L S   + +  +ST+  L +       S S F  +   FS+ S
Sbjct: 390 TIGIGRESQGLYHLTS-DSSPAVCISTDAPLLIHNRLGHPSLSKFQKMVPRFSTLS 444


>gb|KYP60096.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 496

 Score =  577 bits (1488), Expect = 0.0
 Identities = 274/497 (55%), Positives = 367/497 (73%), Gaps = 1/497 (0%)
 Frame = +1

Query: 1675 MDEEMSALISRGTWELVTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGV 1854
            M  EM AL   GTWELV  PP    V CRWV+ +K   DGT+DR KARLVAKG+TQ YG+
Sbjct: 1    MIAEMQALEHSGTWELVPLPPGKQPVGCRWVYAIKVGPDGTVDRLKARLVAKGYTQIYGL 60

Query: 1855 DYFETFSPTARMNSIRVLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGE 2034
            DY +TFSP A++ ++R+  ++A  + WP++QLD+KNAFL+G+L E ++MEQPPG+VAQGE
Sbjct: 61   DYGDTFSPVAKIPTVRLFLAMAAIRHWPLHQLDIKNAFLHGELEEEIYMEQPPGFVAQGE 120

Query: 2035 NATMVCKLKKAIYGLKQSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHSTNGXXXXXXXX 2214
            +  +VC+L++++YGLKQSPRAWF KFS+++     K+ ++DH VF  H++ G        
Sbjct: 121  SG-LVCRLRRSLYGLKQSPRAWFGKFSHVVQNFGLKRSEADHSVFYCHTSPGRCVYLIVY 179

Query: 2215 XXXXX-SGSDIRGIDEVKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLL 2391
                  +G+D   I ++KK+L   F TKD+G  +YFLGIE+A SK G+ + QRKYA D+L
Sbjct: 180  VDDIVITGNDATTISQLKKHLFSQFQTKDLGHLRYFLGIEVAQSKEGIVISQRKYAIDIL 239

Query: 2392 KETGLLGTKPVDTPMDINPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVS 2571
            KETG+L  KP+D+PMD N  +  D GE F D  +YRRLVGKLIYLT+TRPD+SFAVG+VS
Sbjct: 240  KETGMLDCKPIDSPMDPNQKLMADQGEPFTDPERYRRLVGKLIYLTITRPDLSFAVGIVS 299

Query: 2572 RFMDKPKQVHWDAAIRILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGY 2751
            +FM  P   HW+A +RILRYIKK+PG+GL ++  G  +   Y DAD+AG   DRRST+GY
Sbjct: 300  QFMQAPHIDHWNAVLRILRYIKKAPGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGY 359

Query: 2752 CTYIGGNLVTWRSKKQTTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYC 2931
            C ++GGNL++W+SKKQ  VARS+AEAEYRAMA    E++W+K LL+EL F    P+ +YC
Sbjct: 360  CVFLGGNLISWKSKKQNVVARSSAEAEYRAMALITCELMWIKQLLQELKFCEGHPMKLYC 419

Query: 2932 DNQAAIHIASNPVFHERTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKR 3111
            DNQAA+HIASNPVFHERTKHIEVDCHF+RE++++++I T F +S+ Q+A+V TK+L G R
Sbjct: 420  DNQAALHIASNPVFHERTKHIEVDCHFVREKLLSKEIVTKFVTSNEQLADVMTKSLRGPR 479

Query: 3112 FSELCDKLDMIDIYAPA 3162
               LC KL   ++YA A
Sbjct: 480  IQFLCSKLGAYNLYASA 496


>gb|KYP52900.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 737

 Score =  586 bits (1511), Expect = 0.0
 Identities = 287/547 (52%), Positives = 389/547 (71%), Gaps = 4/547 (0%)
 Frame = +1

Query: 1534 CTT---HPLSNHISFDCLGPVFCTFAVSISSTEVPTSYSEAYQHSAWRTAMDEEMSALIS 1704
            CTT   +PL+N++SF    P    F  S+++T  PTS SEA     W+ AMD EM AL  
Sbjct: 192  CTTKPLYPLANYLSFRNFSPTHKAFLTSLNTTTTPTSLSEALSDKKWKQAMDVEMEALEK 251

Query: 1705 RGTWELVTAPPLADIVACRWVFTLKYKADGTIDRYKARLVAKGFTQTYGVDYFETFSPTA 1884
              TW+LV  P     V C+WV+T+KYKADG+I+RYKARLVAKGFTQTYGVDY ETF+P A
Sbjct: 252  NSTWDLVALPNGKKPVGCKWVYTIKYKADGSIERYKARLVAKGFTQTYGVDYMETFAPVA 311

Query: 1885 RMNSIRVLFSLAVNQSWPMYQLDVKNAFLYGDLHETVFMEQPPGYVAQGENATMVCKLKK 2064
            +MN++RV+ SLA N  W + Q DVKNAFL+G++ E ++ME PPGY  +   A  VCKLKK
Sbjct: 312  KMNTVRVILSLAANYGWNLQQFDVKNAFLHGEIEEEIYMELPPGY-GEKTAANTVCKLKK 370

Query: 2065 AIYGLKQSPRAWFDKFSNILGAVDFKQCKSDHFVFVRHS-TNGXXXXXXXXXXXXXSGSD 2241
            A+YGLKQSPRAWF +F+ ++ ++ FKQ + DH +F++HS + G             +G D
Sbjct: 371  ALYGLKQSPRAWFGRFTKVMISLGFKQSQGDHTLFIKHSKSRGVTVLLVYVDDIIVTGDD 430

Query: 2242 IRGIDEVKKYLQQHFVTKDMGRPKYFLGIEIAHSKSGVSLCQRKYATDLLKETGLLGTKP 2421
                  + ++L + F  K +G+ KYFLGIE+AHSK G+ + Q+KY TDLLKETG    KP
Sbjct: 431  EEEQRLLGQHLAKEFEIKTLGKLKYFLGIEVAHSKKGIFISQQKYITDLLKETGKTACKP 490

Query: 2422 VDTPMDINPSVWDDNGEFFEDKAKYRRLVGKLIYLTVTRPDISFAVGMVSRFMDKPKQVH 2601
              TP+D N  + +   +   DK  Y+RLVG+LIYL+ TRPD++FAV +VS+FM +PK+VH
Sbjct: 491  ASTPIDPNLKLGNAEEDTAVDKEGYQRLVGRLIYLSHTRPDVAFAVSLVSQFMHQPKEVH 550

Query: 2602 WDAAIRILRYIKKSPGKGLSFKRNGHLKTEAYSDADYAGSKNDRRSTSGYCTYIGGNLVT 2781
              AA+RI++Y+K +PG+G+ FKRN ++  EAY+DADYAGS  DRRST+GYCT++GGNLVT
Sbjct: 551  LQAALRIVQYLKGTPGRGILFKRNRNVNLEAYTDADYAGSIVDRRSTTGYCTFLGGNLVT 610

Query: 2782 WRSKKQTTVARSTAEAEYRAMAHTVTEMLWLKNLLEELGFTYNEPLPMYCDNQAAIHIAS 2961
            W+SKKQ+ VARS+AEAE+RAMA  + E+LWLK +LE+L    +EP+ +YCDN++AI IA 
Sbjct: 611  WKSKKQSVVARSSAEAEFRAMAQGICELLWLKIILEDLRIKSDEPMRLYCDNKSAISIAH 670

Query: 2962 NPVFHERTKHIEVDCHFIRERVMNQKISTPFTSSSNQVANVFTKALGGKRFSELCDKLDM 3141
            NPV H+RTKHIEVD HFI+E++ +  I TP+ SS + +A++ TK L    F ++  KL M
Sbjct: 671  NPVQHDRTKHIEVDRHFIKEKLDSGLICTPYVSSQDNLADILTKGLNSSIFEKIVSKLGM 730

Query: 3142 IDIYAPA 3162
             + Y+PA
Sbjct: 731  ENTYSPA 737