BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00017779
         (1369 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075826.1| PREDICTED: pentatricopeptide repeat-containi...   761   0.0  
ref|XP_012843907.1| PREDICTED: pentatricopeptide repeat-containi...   735   0.0  
gb|EYU45363.1| hypothetical protein MIMGU_mgv1a022626mg [Erythra...   723   0.0  
ref|XP_009592011.1| PREDICTED: pentatricopeptide repeat-containi...   642   0.0  
ref|XP_009773680.1| PREDICTED: pentatricopeptide repeat-containi...   637   0.0  
ref|XP_009773679.1| PREDICTED: pentatricopeptide repeat-containi...   637   0.0  
ref|XP_015088942.1| PREDICTED: pentatricopeptide repeat-containi...   631   0.0  
ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containi...   627   0.0  
ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containi...   627   0.0  
ref|XP_010662150.1| PREDICTED: pentatricopeptide repeat-containi...   616   0.0  
ref|XP_010275173.1| PREDICTED: pentatricopeptide repeat-containi...   614   0.0  
emb|CDP11622.1| unnamed protein product [Coffea canephora]            614   0.0  
ref|XP_007029495.1| Pentatricopeptide repeat-containing protein,...   612   0.0  
gb|KHG03831.1| hypothetical protein F383_26634 [Gossypium arboreum]   608   0.0  
gb|KJB76397.1| hypothetical protein B456_012G086600 [Gossypium r...   605   0.0  
ref|XP_012459106.1| PREDICTED: pentatricopeptide repeat-containi...   605   0.0  
gb|KJB76398.1| hypothetical protein B456_012G086600 [Gossypium r...   605   0.0  
ref|XP_012459104.1| PREDICTED: pentatricopeptide repeat-containi...   605   0.0  
ref|XP_012459103.1| PREDICTED: pentatricopeptide repeat-containi...   605   0.0  
ref|XP_012459102.1| PREDICTED: pentatricopeptide repeat-containi...   605   0.0  

>ref|XP_011075826.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Sesamum indicum]
          Length = 432

 Score =  761 bits (1966), Expect = 0.0
 Identities = 372/432 (86%), Positives = 405/432 (93%)
 Frame = -1

Query: 1342 MLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALFQEMLISG 1163
            M+CELCEEGE+++A+ALLSQMEALG RPN  SYSCL+TGLGNVGRTLEADA+FQEMLISG
Sbjct: 1    MICELCEEGELNNALALLSQMEALGYRPNLISYSCLVTGLGNVGRTLEADAIFQEMLISG 60

Query: 1162 CRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTW 983
            CRPK RLFNALL  CLKKGLLE+ DKVL AID+LGL+RNRKTFEILIDYYVS+GRLNDTW
Sbjct: 61   CRPKTRLFNALLTGCLKKGLLELSDKVLKAIDDLGLDRNRKTFEILIDYYVSSGRLNDTW 120

Query: 982  LVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTF 803
            LVIAEMKRKGY+PNSYVYSKII+IYRDNGMWKKAMGVLGEVRA GMALDR IY+SIIDTF
Sbjct: 121  LVIAEMKRKGYNPNSYVYSKIIEIYRDNGMWKKAMGVLGEVRAKGMALDRKIYNSIIDTF 180

Query: 802  GKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDP 623
            GK+GELGEALEVFEKMQED IKPDV+TWNSLIRWHCKFG+  GA+ LF RMQEQG YPDP
Sbjct: 181  GKYGELGEALEVFEKMQEDHIKPDVKTWNSLIRWHCKFGEISGAVTLFARMQEQGIYPDP 240

Query: 622  KIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQA 443
            KIFMTIIS LGEQGKWD I+KIFENM+ KGQQRSGAI+ +LVDIYGQYGKFQN +DCI A
Sbjct: 241  KIFMTIISCLGEQGKWDVIRKIFENMRGKGQQRSGAIYAILVDIYGQYGKFQNAEDCILA 300

Query: 442  LKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGR 263
            LK EG+QLSP++FCVLANAYAQQGLCEQTV+VLQLMEAEG+E NLIMLN+LINAFATAGR
Sbjct: 301  LKSEGIQLSPSMFCVLANAYAQQGLCEQTVKVLQLMEAEGMEPNLIMLNVLINAFATAGR 360

Query: 262  HMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREM 83
            HMEAL++Y HIRESGISPDVVTYSTLMKAFLW+KKFDQVPKIYSEMEASGCSPDRKAREM
Sbjct: 361  HMEALSIYQHIRESGISPDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGCSPDRKAREM 420

Query: 82   LKSALLILERKH 47
            LKSA+ ILER H
Sbjct: 421  LKSAVSILERGH 432



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 58/274 (21%), Positives = 129/274 (47%)
 Frame = -1

Query: 1354 MYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALFQEM 1175
            +Y++++    + G    AM +L ++ A G   +   Y+ +I   G  G   EA  +F++M
Sbjct: 137  VYSKIIEIYRDNGMWKKAMGVLGEVRAKGMALDRKIYNSIIDTFGKYGELGEALEVFEKM 196

Query: 1174 LISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRL 995
                 +P ++ +N+L++   K G +     +   + E G+  + K F  +I      G+ 
Sbjct: 197  QEDHIKPDVKTWNSLIRWHCKFGEISGAVTLFARMQEQGIYPDPKIFMTIISCLGEQGKW 256

Query: 994  NDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSI 815
            +    +   M+ KG   +  +Y+ ++ IY   G ++ A   +  +++ G+ L  S++  +
Sbjct: 257  DVIRKIFENMRGKGQQRSGAIYAILVDIYGQYGKFQNAEDCILALKSEGIQLSPSMFCVL 316

Query: 814  IDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGT 635
             + + + G   + ++V + M+ + ++P++   N LI      G    AL ++  ++E G 
Sbjct: 317  ANAYAQQGLCEQTVKVLQLMEAEGMEPNLIMLNVLINAFATAGRHMEALSIYQHIRESGI 376

Query: 634  YPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKG 533
             PD   + T++       K+D + KI+  M+  G
Sbjct: 377  SPDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASG 410


>ref|XP_012843907.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Erythranthe guttata]
          Length = 514

 Score =  735 bits (1898), Expect = 0.0
 Identities = 357/441 (80%), Positives = 401/441 (90%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            E S D+YNEMLCE+CEEGE+DDAMALLSQMEALG RP S SYS LIT L + GRTLEADA
Sbjct: 74   EFSVDVYNEMLCEMCEEGEVDDAMALLSQMEALGVRPYSISYSYLITRLADAGRTLEADA 133

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            + QEMLISGC+PKIRL NA+L SCLKKGLLE+ +KVL+AID+LGL RNRKTFEILIDY+V
Sbjct: 134  ILQEMLISGCKPKIRLLNAMLTSCLKKGLLELSEKVLIAIDDLGLHRNRKTFEILIDYHV 193

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            S+GRLNDTWLVIAEMKRKGY PNSYVYSKII+IYRDNGMWKKAM V+GE+R MG+A+DR 
Sbjct: 194  SSGRLNDTWLVIAEMKRKGYYPNSYVYSKIIEIYRDNGMWKKAMAVMGEIREMGLAMDRR 253

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IYSSIIDTF ++GELGEALE+FEKMQ+D IKPD+ TWNSLIRWHCK+GD GGAL LF RM
Sbjct: 254  IYSSIIDTFARYGELGEALELFEKMQKDGIKPDINTWNSLIRWHCKYGDSGGALGLFGRM 313

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QE+G YPDPKIF+TIISTLGEQGKWD I+K FENMK +GQQ+SGAI+ VLVDIYGQYGKF
Sbjct: 314  QEEGIYPDPKIFVTIISTLGEQGKWDVIRKNFENMKVRGQQKSGAIYAVLVDIYGQYGKF 373

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            QN +DC+ ALK EGV+LS ++FCVLA+AYAQQGLCEQ V+VLQLMEAEG+E NLIMLN+L
Sbjct: 374  QNAEDCVMALKSEGVELSRSVFCVLADAYAQQGLCEQVVKVLQLMEAEGMEMNLIMLNVL 433

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAFA AGR  EAL+VYHHI ESGISPDVVTYSTLMKAFLW+KKFDQVPKIYSEMEASGC
Sbjct: 434  INAFAIAGRDTEALSVYHHILESGISPDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGC 493

Query: 109  SPDRKAREMLKSALLILERKH 47
            SPDRKAREMLKSAL+ LE++H
Sbjct: 494  SPDRKAREMLKSALIALEQRH 514



 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 60/320 (18%), Positives = 127/320 (39%)
 Frame = -1

Query: 1072 IDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGM 893
            I+  G E +   +  ++      G ++D   ++++M+  G  P S  YS +I    D G 
Sbjct: 68   INSEGKEFSVDVYNEMLCEMCEEGEVDDAMALLSQMEALGVRPYSISYSYLITRLADAGR 127

Query: 892  WKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNS 713
              +A  +L E+   G      + ++++ +  K G L  + +V   + +  +  + +T+  
Sbjct: 128  TLEADAILQEMLISGCKPKIRLLNAMLTSCLKKGLLELSEKVLIAIDDLGLHRNRKTFEI 187

Query: 712  LIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKG 533
            LI +H   G       +   M+ +G YP+  ++  II    + G W     +   ++  G
Sbjct: 188  LIDYHVSSGRLNDTWLVIAEMKRKGYYPNSYVYSKIIEIYRDNGMWKKAMAVMGEIREMG 247

Query: 532  QQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTV 353
                  I+  ++D + +YG+                                     + +
Sbjct: 248  LAMDRRIYSSIIDTFARYGEL-----------------------------------GEAL 272

Query: 352  RVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAF 173
             + + M+ +GI+ ++   N LI      G    AL ++  ++E GI PD   + T++   
Sbjct: 273  ELFEKMQKDGIKPDINTWNSLIRWHCKYGDSGGALGLFGRMQEEGIYPDPKIFVTIISTL 332

Query: 172  LWSKKFDQVPKIYSEMEASG 113
                K+D + K +  M+  G
Sbjct: 333  GEQGKWDVIRKNFENMKVRG 352


>gb|EYU45363.1| hypothetical protein MIMGU_mgv1a022626mg [Erythranthe guttata]
          Length = 432

 Score =  723 bits (1865), Expect = 0.0
 Identities = 351/432 (81%), Positives = 394/432 (91%)
 Frame = -1

Query: 1342 MLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALFQEMLISG 1163
            MLCE+CEEGE+DDAMALLSQMEALG RP S SYS LIT L + GRTLEADA+ QEMLISG
Sbjct: 1    MLCEMCEEGEVDDAMALLSQMEALGVRPYSISYSYLITRLADAGRTLEADAILQEMLISG 60

Query: 1162 CRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTW 983
            C+PKIRL NA+L SCLKKGLLE+ +KVL+AID+LGL RNRKTFEILIDY+VS+GRLNDTW
Sbjct: 61   CKPKIRLLNAMLTSCLKKGLLELSEKVLIAIDDLGLHRNRKTFEILIDYHVSSGRLNDTW 120

Query: 982  LVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTF 803
            LVIAEMKRKGY PNSYVYSKII+IYRDNGMWKKAM V+GE+R MG+A+DR IYSSIIDTF
Sbjct: 121  LVIAEMKRKGYYPNSYVYSKIIEIYRDNGMWKKAMAVMGEIREMGLAMDRRIYSSIIDTF 180

Query: 802  GKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDP 623
             ++GELGEALE+FEKMQ+D IKPD+ TWNSLIRWHCK+GD GGAL LF RMQE+G YPDP
Sbjct: 181  ARYGELGEALELFEKMQKDGIKPDINTWNSLIRWHCKYGDSGGALGLFGRMQEEGIYPDP 240

Query: 622  KIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQA 443
            KIF+TIISTLGEQGKWD I+K FENMK +GQQ+SGAI+ VLVDIYGQYGKFQN +DC+ A
Sbjct: 241  KIFVTIISTLGEQGKWDVIRKNFENMKVRGQQKSGAIYAVLVDIYGQYGKFQNAEDCVMA 300

Query: 442  LKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGR 263
            LK EGV+LS ++FCVLA+AYAQQGLCEQ V+VLQLMEAEG+E NLIMLN+LINAFA AGR
Sbjct: 301  LKSEGVELSRSVFCVLADAYAQQGLCEQVVKVLQLMEAEGMEMNLIMLNVLINAFAIAGR 360

Query: 262  HMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGCSPDRKAREM 83
              EAL+VYHHI ESGISPDVVTYSTLMKAFLW+KKFDQVPKIYSEMEASGCSPDRKAREM
Sbjct: 361  DTEALSVYHHILESGISPDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGCSPDRKAREM 420

Query: 82   LKSALLILERKH 47
            LKSAL+ LE++H
Sbjct: 421  LKSALIALEQRH 432



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 57/248 (22%), Positives = 117/248 (47%), Gaps = 3/248 (1%)
 Frame = -1

Query: 1354 MYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADALFQEM 1175
            +Y+ ++      GE+ +A+ L  +M+  G +P+  +++ LI      G +  A  LF  M
Sbjct: 172  IYSSIIDTFARYGELGEALELFEKMQKDGIKPDINTWNSLIRWHCKYGDSGGALGLFGRM 231

Query: 1174 LISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRL 995
               G  P  ++F  ++ +  ++G  ++  K    +   G +++   + +L+D Y   G+ 
Sbjct: 232  QEEGIYPDPKIFVTIISTLGEQGKWDVIRKNFENMKVRGQQKSGAIYAVLVDIYGQYGKF 291

Query: 994  NDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSI 815
             +    +  +K +G   +  V+  +   Y   G+ ++ + VL  + A GM ++  + + +
Sbjct: 292  QNAEDCVMALKSEGVELSRSVFCVLADAYAQQGLCEQVVKVLQLMEAEGMEMNLIMLNVL 351

Query: 814  IDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIR---WHCKFGDCGGALDLFDRMQE 644
            I+ F   G   EAL V+  + E  I PDV T+++L++   W  KF        ++  M+ 
Sbjct: 352  INAFAIAGRDTEALSVYHHILESGISPDVVTYSTLMKAFLWAKKFDQ---VPKIYSEMEA 408

Query: 643  QGTYPDPK 620
             G  PD K
Sbjct: 409  SGCSPDRK 416


>ref|XP_009592011.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Nicotiana tomentosiformis]
            gi|697166361|ref|XP_009592012.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Nicotiana tomentosiformis]
            gi|697166363|ref|XP_009592013.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Nicotiana tomentosiformis]
          Length = 523

 Score =  642 bits (1656), Expect = 0.0
 Identities = 303/441 (68%), Positives = 381/441 (86%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            E+S D+YN  +CELC EG++D AM LLSQMEALG   N  SY+ LI  LG+VGRTLEADA
Sbjct: 82   EISYDLYNASICELCSEGDVDKAMGLLSQMEALGFHANYLSYTSLIAALGSVGRTLEADA 141

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +F EML SG RP +++FNALL+S L+KGLL + DKVL+ +++L +ERN++T+EIL++YYV
Sbjct: 142  IFHEMLSSGRRPGVKVFNALLRSFLRKGLLRLADKVLMLLEDLDVERNQETYEILLEYYV 201

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            +AGRL DTWL++++M+R+ Y  NS+VYSKII++YRDNGMWKKA+G++ E+R MG+ LD+ 
Sbjct: 202  NAGRLEDTWLIVSKMRRESYRLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKR 261

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            +++SIIDTFGK+GELGEALEVFEKM+ D IKPD  TWNSLIRWHCKFG    A+DLFD M
Sbjct: 262  LFNSIIDTFGKYGELGEALEVFEKMRRDGIKPDFRTWNSLIRWHCKFGHLDTAIDLFDEM 321

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKIF+ II+ L EQG+WD I KI +NM+ +G  +SGAI+ VLVDIYGQ G+F
Sbjct: 322  QEQGLYPDPKIFIIIITHLVEQGRWDVINKILKNMQGRGHHKSGAIYAVLVDIYGQQGRF 381

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ + C+ ALKLEG+QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIMLN+L
Sbjct: 382  QDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNVL 441

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF TAGRHMEAL++Y HIRE GI+PDVVTYSTLMKAF+ +KKFDQVPKIYSEME++GC
Sbjct: 442  INAFGTAGRHMEALSIYQHIREMGITPDVVTYSTLMKAFMRAKKFDQVPKIYSEMESAGC 501

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKARE+L+SAL+ILE++H
Sbjct: 502  TPDRKAREVLQSALMILEQRH 522


>ref|XP_009773680.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Nicotiana sylvestris]
            gi|698567110|ref|XP_009773681.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Nicotiana sylvestris]
          Length = 523

 Score =  637 bits (1644), Expect = 0.0
 Identities = 301/441 (68%), Positives = 378/441 (85%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            E+S D+YN  +CELC EG++D AM LLSQMEALG   N  SYS LI  LG+VGRTLEADA
Sbjct: 82   EISYDLYNASICELCSEGDVDKAMGLLSQMEALGFHANYLSYSSLIAALGSVGRTLEADA 141

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +F EML SG RP +++ NALL+S L+KG L + DKVL+ +++L +ERN++T+EIL++YYV
Sbjct: 142  IFHEMLSSGRRPGVKVVNALLRSFLRKGFLRLADKVLMFLEDLDVERNQETYEILLEYYV 201

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            +AGRL DTW ++++M+R+ Y  NS+VYSKII++YRDNGMWKKA+G++ E+R MG+ LD+ 
Sbjct: 202  NAGRLEDTWSIVSKMRRESYGLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKR 261

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            +++SIIDTFGK+GELGEALEVFEKM+ D IKPD  TWNSLIRWHCKFG    A+DLFD M
Sbjct: 262  LFNSIIDTFGKYGELGEALEVFEKMRRDGIKPDFRTWNSLIRWHCKFGHLDAAIDLFDEM 321

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKIF+ II+ L EQG+WD I KI +NM+ +G  +SGAI+ VLVDIYGQ G+F
Sbjct: 322  QEQGLYPDPKIFIIIITHLVEQGRWDVINKILKNMQGRGHHKSGAIYAVLVDIYGQQGRF 381

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ + C+ ALKLEG+QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIMLN+L
Sbjct: 382  QDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNVL 441

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF TAGRHMEAL++Y HIRE GI+PDVVTYSTLMKAF+ +KKFDQVPKIYSEME++GC
Sbjct: 442  INAFGTAGRHMEALSIYQHIREMGITPDVVTYSTLMKAFMRAKKFDQVPKIYSEMESAGC 501

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKARE+L+SAL+ILE++H
Sbjct: 502  TPDRKAREVLQSALMILEQRH 522


>ref|XP_009773679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Nicotiana sylvestris]
          Length = 560

 Score =  637 bits (1644), Expect = 0.0
 Identities = 301/441 (68%), Positives = 378/441 (85%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            E+S D+YN  +CELC EG++D AM LLSQMEALG   N  SYS LI  LG+VGRTLEADA
Sbjct: 119  EISYDLYNASICELCSEGDVDKAMGLLSQMEALGFHANYLSYSSLIAALGSVGRTLEADA 178

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +F EML SG RP +++ NALL+S L+KG L + DKVL+ +++L +ERN++T+EIL++YYV
Sbjct: 179  IFHEMLSSGRRPGVKVVNALLRSFLRKGFLRLADKVLMFLEDLDVERNQETYEILLEYYV 238

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            +AGRL DTW ++++M+R+ Y  NS+VYSKII++YRDNGMWKKA+G++ E+R MG+ LD+ 
Sbjct: 239  NAGRLEDTWSIVSKMRRESYGLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKR 298

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            +++SIIDTFGK+GELGEALEVFEKM+ D IKPD  TWNSLIRWHCKFG    A+DLFD M
Sbjct: 299  LFNSIIDTFGKYGELGEALEVFEKMRRDGIKPDFRTWNSLIRWHCKFGHLDAAIDLFDEM 358

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKIF+ II+ L EQG+WD I KI +NM+ +G  +SGAI+ VLVDIYGQ G+F
Sbjct: 359  QEQGLYPDPKIFIIIITHLVEQGRWDVINKILKNMQGRGHHKSGAIYAVLVDIYGQQGRF 418

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ + C+ ALKLEG+QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIMLN+L
Sbjct: 419  QDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNVL 478

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF TAGRHMEAL++Y HIRE GI+PDVVTYSTLMKAF+ +KKFDQVPKIYSEME++GC
Sbjct: 479  INAFGTAGRHMEALSIYQHIREMGITPDVVTYSTLMKAFMRAKKFDQVPKIYSEMESAGC 538

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKARE+L+SAL+ILE++H
Sbjct: 539  TPDRKAREVLQSALMILEQRH 559


>ref|XP_015088942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum pennellii]
            gi|970054609|ref|XP_015088943.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum pennellii]
            gi|970054611|ref|XP_015088944.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum pennellii]
            gi|970054613|ref|XP_015088945.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum pennellii]
          Length = 523

 Score =  631 bits (1627), Expect = 0.0
 Identities = 296/441 (67%), Positives = 378/441 (85%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            E+S D+YNE +CELC EG+ID AM LLS+MEALG  P+  SYS LI  LG+VGRT EADA
Sbjct: 82   EISYDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTAEADA 141

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +FQEML S  +P+I++FN LL+S L+KGLL + DKVL+ +D+L ++RN++T+EIL++YYV
Sbjct: 142  IFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYYV 201

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTWL++A+M+R+ Y  NS+VYSKII++YRDNGMWKKA+G++ E+R MG+ LD+ 
Sbjct: 202  SAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKR 261

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            +++SIIDTFGK+GELGEAL +F+KM+++ IKPD  TWNSLIRWHCK+G    A++LF+ M
Sbjct: 262  LFNSIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDSAIELFNEM 321

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKIF+ I + L EQG+WD I  I ENM+ +G  RSGAI+ VLVDIYGQ G+F
Sbjct: 322  QEQGLYPDPKIFIIINTHLVEQGRWDDIDTILENMQGRGHHRSGAIYAVLVDIYGQQGRF 381

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            ++ + C+ ALKLEG+QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIMLNML
Sbjct: 382  EDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNML 441

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRHMEA ++Y HI+E GI+PDV+TYSTLMKAFL +KKFDQVPKIYSEME++GC
Sbjct: 442  INAFGNAGRHMEAQSIYQHIKEMGITPDVITYSTLMKAFLRAKKFDQVPKIYSEMESTGC 501

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAREML+SAL+ILE++H
Sbjct: 502  TPDRKAREMLQSALMILEQRH 522



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 74/342 (21%), Positives = 143/342 (41%)
 Frame = -1

Query: 1120 CLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPN 941
            CLK  +  +  K+L    +L L+   K F  L+      G + ++        R G   +
Sbjct: 27   CLKHHINPVKHKLLHTSCQLILQSRGKRFGFLVSCL--NGTIENSNNEQQTCYRNGEEIS 84

Query: 940  SYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFE 761
              +Y++ I      G   KAM +L E+ A+G       YSS+I   G  G   EA  +F+
Sbjct: 85   YDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTAEADAIFQ 144

Query: 760  KMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIISTLGEQG 581
            +M     KP ++ +N L+R   +     G L L D                         
Sbjct: 145  EMLCSSRKPRIKVFNILLRSFLR----KGLLRLAD------------------------- 175

Query: 580  KWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLSPNIFC 401
                  K+   +      R+   + +L++ Y   G+ ++T   +  ++ E   L+  ++ 
Sbjct: 176  ------KVLMLLDDLAVDRNQETYEILLEYYVSAGRLEDTWLIVAKMRRESYPLNSFVYS 229

Query: 400  VLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRES 221
             +   Y   G+ ++ + +++ +   G+  +  + N +I+ F   G   EAL ++  +R+ 
Sbjct: 230  KIIELYRDNGMWKKALGIVEEIREMGLRLDKRLFNSIIDTFGKYGELGEALGMFDKMRQE 289

Query: 220  GISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGCSPDRK 95
            GI PD  T+++L++        D   ++++EM+  G  PD K
Sbjct: 290  GIKPDFRTWNSLIRWHCKYGHLDSAIELFNEMQEQGLYPDPK 331


>ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
            gi|565369411|ref|XP_006351329.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
            gi|971557414|ref|XP_015165937.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
            gi|971557417|ref|XP_015165938.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
          Length = 523

 Score =  627 bits (1618), Expect = 0.0
 Identities = 293/441 (66%), Positives = 380/441 (86%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            E+S D+YNE +CELC EG++D AM LLS+MEALG  P+  SYS LI  LG+VGRT EADA
Sbjct: 82   EISYDLYNESICELCTEGDVDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEADA 141

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +FQEML S  +P+I++FN LL+S L+KGLL + DKVL+ +D+L ++RN++T+EIL++YYV
Sbjct: 142  IFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYYV 201

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTWL++A+M+R+ Y  NS+VYSKII++YRDNGMWKKA+G++ E+R MG+ LD+ 
Sbjct: 202  SAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKR 261

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            I++SIIDTFGK+GELGEALE+F+KM+++ IKPD  TWNSLIRWHCK+G    A++LF+ M
Sbjct: 262  IFNSIIDTFGKYGELGEALEMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELFNEM 321

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            Q+QG YPDPKIF+ II+ L EQG+W  I  I ENM+ +G  +SGAI+ VLVDIYGQ+G+F
Sbjct: 322  QDQGLYPDPKIFIIIITHLVEQGRWAVIDTILENMQGRGHHKSGAIYAVLVDIYGQHGRF 381

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            ++ + C+ +LKLEG+QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIMLNML
Sbjct: 382  EDAEYCLNSLKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNML 441

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRHMEA ++Y HI+E GI+PDV+TYSTLMKAF+ +KKFDQVPKIYSEME++GC
Sbjct: 442  INAFGNAGRHMEAQSIYLHIKEMGITPDVITYSTLMKAFMRAKKFDQVPKIYSEMESTGC 501

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAREML+SAL+ILE++H
Sbjct: 502  TPDRKAREMLQSALMILEQRH 522


>ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738498|ref|XP_010312136.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738501|ref|XP_010312137.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738504|ref|XP_010312138.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738507|ref|XP_010312139.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738510|ref|XP_010312140.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
            gi|723738513|ref|XP_010312142.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
          Length = 523

 Score =  627 bits (1616), Expect = 0.0
 Identities = 294/441 (66%), Positives = 378/441 (85%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            E+S D+YNE +CELC EG+ID AM LLS+MEALG  P+  SYS LI  LG+VGRT EADA
Sbjct: 82   EISYDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEADA 141

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +FQEML S  +P+I++FN LL+S L+KGLL + DKVL+ +D+L ++RN++T+EIL++YYV
Sbjct: 142  IFQEMLCSSRKPRIKVFNILLRSFLRKGLLRLADKVLMLLDDLAVDRNQETYEILLEYYV 201

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTWL++A+M+R+ Y  NS+VYSKII++YRDNGMWKKA+G++ E+R MG+ LD+ 
Sbjct: 202  SAGRLEDTWLIVAKMRRESYPLNSFVYSKIIELYRDNGMWKKALGIVEEIREMGLRLDKR 261

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            +++SIIDTFGK+GELGEAL +F+KM+++ IKPD  TWNSLIRWHCK+G    A++LF+ M
Sbjct: 262  LFNSIIDTFGKYGELGEALGMFDKMRQEGIKPDFRTWNSLIRWHCKYGHLDTAIELFNEM 321

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKIF+ I + L EQG+WD I  I E+M+ +G  +SGAI+ VLVDIYGQ G+F
Sbjct: 322  QEQGLYPDPKIFIIINTHLVEQGRWDDIDTILESMQGRGHHKSGAIYAVLVDIYGQQGRF 381

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            ++ + C+ ALKLEG+QLSP+IFCVLA+AYAQQGLCEQTV+VLQ+MEAEG+E NLIMLNML
Sbjct: 382  EDAEYCLNALKLEGLQLSPSIFCVLAHAYAQQGLCEQTVKVLQIMEAEGMEPNLIMLNML 441

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRHMEA ++Y HI+E GI+PDV+TYSTLMKAFL +KKFDQVPKIYSEME++GC
Sbjct: 442  INAFGNAGRHMEAQSIYQHIKEMGITPDVITYSTLMKAFLRAKKFDQVPKIYSEMESTGC 501

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAREML+SAL+ILE++H
Sbjct: 502  TPDRKAREMLQSALMILEQRH 522



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 74/342 (21%), Positives = 144/342 (42%)
 Frame = -1

Query: 1120 CLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPN 941
            CLK  +  +  K+L    +L L+   K F  L++     G + ++        R G   +
Sbjct: 27   CLKHHINPVKHKLLHTSCQLILQSRGKRFGFLVNCL--NGTIENSNNEQQTCYRNGEEIS 84

Query: 940  SYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFE 761
              +Y++ I      G   KAM +L E+ A+G       YSS+I   G  G   EA  +F+
Sbjct: 85   YDLYNESICELCTEGDIDKAMRLLSEMEALGFHPSFVSYSSLIAALGSVGRTSEADAIFQ 144

Query: 760  KMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIISTLGEQG 581
            +M     KP ++ +N L+R   +     G L L D                         
Sbjct: 145  EMLCSSRKPRIKVFNILLRSFLR----KGLLRLAD------------------------- 175

Query: 580  KWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLSPNIFC 401
                  K+   +      R+   + +L++ Y   G+ ++T   +  ++ E   L+  ++ 
Sbjct: 176  ------KVLMLLDDLAVDRNQETYEILLEYYVSAGRLEDTWLIVAKMRRESYPLNSFVYS 229

Query: 400  VLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYHHIRES 221
             +   Y   G+ ++ + +++ +   G+  +  + N +I+ F   G   EAL ++  +R+ 
Sbjct: 230  KIIELYRDNGMWKKALGIVEEIREMGLRLDKRLFNSIIDTFGKYGELGEALGMFDKMRQE 289

Query: 220  GISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGCSPDRK 95
            GI PD  T+++L++        D   ++++EM+  G  PD K
Sbjct: 290  GIKPDFRTWNSLIRWHCKYGHLDTAIELFNEMQEQGLYPDPK 331


>ref|XP_010662150.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Vitis vinifera]
          Length = 503

 Score =  616 bits (1589), Expect = 0.0
 Identities = 294/441 (66%), Positives = 369/441 (83%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS  +YN  + E C  G++D AM LL+QMEALG   +  SY+ +I  LG+VGRTLEA+A
Sbjct: 63   ELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEA 122

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +F+EM+  G +  +R++N +L+SCL+KGLLE+ DKVL  +D LG+ RNR T+E L+DYY 
Sbjct: 123  IFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYG 182

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
             AGRLND W VI EM R G+ P+S+VYSK+I +YRDNGMWKKAM ++ E+R MG++LD+ 
Sbjct: 183  RAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKR 242

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK GEL EALEVFEKMQE+ +KPD+ TWNSLI+WHCK GD G AL+LF +M
Sbjct: 243  IYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKM 302

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QE+G YPDPKIF+TIIS LGEQGKWD IK+ FENMK +G QRSGAI+ +LVDIYGQYG+F
Sbjct: 303  QEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRF 362

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q  ++CI ALK EG+Q S ++FCVLANAYAQQGLCEQTV+VLQLME EGIE NLIMLNML
Sbjct: 363  QGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNML 422

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH+EAL+VYHHI+++GISPDVVTYSTLMKA + ++KFD+VP+IY EME++GC
Sbjct: 423  INAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGC 482

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAREML++ALL+L+++H
Sbjct: 483  TPDRKAREMLQTALLVLQQRH 503


>ref|XP_010275173.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Nelumbo nucifera]
          Length = 536

 Score =  614 bits (1584), Expect = 0.0
 Identities = 290/441 (65%), Positives = 367/441 (83%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            E+SC++YN  +   C EG+ID +MALL+QMEALG RPN  SY+C+I  LG+VGRTLEADA
Sbjct: 84   EISCEIYNISIRNYCREGDIDKSMALLAQMEALGIRPNLISYTCVIEALGSVGRTLEADA 143

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +FQEM  SG  P+++ +N LLK  L+KGLL + D+VL+ + +L + RN+ T+EIL+DYYV
Sbjct: 144  IFQEMRWSGFEPRVKAYNVLLKGFLRKGLLGLADRVLLEMGDLDIGRNQDTYEILLDYYV 203

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
             AGRL+DTW VI EMKR+G   NSYVYSKII +YRDNGMW+KAM VL E+R MG+ LDR 
Sbjct: 204  HAGRLDDTWSVINEMKREGLKLNSYVYSKIINLYRDNGMWQKAMDVLREMREMGVPLDRR 263

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GEL EA+  FE MQ++ I+PD+ TWNSLIRWHCK G+ GGAL+   +M
Sbjct: 264  IYNSIIDTFGKYGELEEAVGAFENMQKEGIRPDIMTWNSLIRWHCKAGEVGGALEFLTKM 323

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKIF+ IIS L EQGKW+ IKK FENMK +G ++SG I+ VL DIYGQYG+F
Sbjct: 324  QEQGLYPDPKIFVNIISRLAEQGKWNAIKKNFENMKHRGLRKSGVIYAVLADIYGQYGRF 383

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ D+C+ ALK EG++ S N+FC LANAYAQQGLCEQTVR+LQLMEA+GIE NLIMLNML
Sbjct: 384  QDADECLLALKSEGLKPSANMFCALANAYAQQGLCEQTVRILQLMEADGIEPNLIMLNML 443

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH+EAL++++H+++SGI+PDVVTYSTLMKAF+ ++KFDQVP IY EME +GC
Sbjct: 444  INAFGVAGRHLEALSIFYHMKDSGINPDVVTYSTLMKAFIRARKFDQVPGIYKEMECAGC 503

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDR+AREML++AL++LE++H
Sbjct: 504  TPDRRAREMLQNALMVLEQRH 524


>emb|CDP11622.1| unnamed protein product [Coffea canephora]
          Length = 555

 Score =  614 bits (1584), Expect = 0.0
 Identities = 291/442 (65%), Positives = 370/442 (83%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS   +NE +CE+C  GE+++AM+LLSQMEALG RPN  SY+ LIT LGNVGRTLEADA
Sbjct: 106  ELSYISFNESICEMCMSGEVNEAMSLLSQMEALGSRPNLKSYTLLITALGNVGRTLEADA 165

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            +FQEM   G RP+++ FN LL+  L+KGL  + DKVL+ +D+LG++RNR+T+EIL++Y+ 
Sbjct: 166  IFQEMTSLGYRPRVKAFNVLLRCFLRKGLPGLADKVLLTLDDLGIQRNRETYEILLEYHA 225

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
             A RL DTWLVIAEM+R+GY PNS+VYSK+I++YRDNGMW+KA  ++GE+R MG++LDR 
Sbjct: 226  RAKRLADTWLVIAEMRREGYHPNSFVYSKVIELYRDNGMWRKATSIVGEIRGMGLSLDRK 285

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTF K+GELGEA+EVF+ MQ + I PD+ TWNSLIRWHCKFGD   ALD+F  M
Sbjct: 286  IYNSIIDTFCKYGELGEAVEVFKTMQLEGIMPDITTWNSLIRWHCKFGDVSNALDMFISM 345

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKIF+TIIS L EQGKWD IKK  EN+K +G  RSGAI+ VL DIYGQYG+F
Sbjct: 346  QEQGLYPDPKIFITIISRLAEQGKWDVIKKTSENIKHRGHHRSGAIYAVLADIYGQYGRF 405

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ D+CI AL+ EGV+LS + FC++ANAYAQQGLCEQT++VLQLMEAEGIE NL+MLN+L
Sbjct: 406  QDADNCINALRSEGVKLSASTFCIIANAYAQQGLCEQTIKVLQLMEAEGIELNLLMLNVL 465

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDV-VTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            +NAF+TAGRH+EAL+V++HIRE+       +TYSTLMKAF+ +KKFDQVP IY EME +G
Sbjct: 466  LNAFSTAGRHLEALSVFNHIRETARPLTFSITYSTLMKAFIRAKKFDQVPSIYKEMEYAG 525

Query: 112  CSPDRKAREMLKSALLILERKH 47
            C+PDRKAREML++A ++L+++H
Sbjct: 526  CTPDRKAREMLQAAEMVLQQRH 547



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 63/353 (17%), Positives = 139/353 (39%), Gaps = 35/353 (9%)
 Frame = -1

Query: 1066 ELGLERNRKTFEILIDYYVSAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWK 887
            E G E +  +F   I     +G +N+   ++++M+  G  PN   Y+ +I    + G   
Sbjct: 102  EDGEELSYISFNESICEMCMSGEVNEAMSLLSQMEALGSRPNLKSYTLLITALGNVGRTL 161

Query: 886  KAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLI 707
            +A  +  E+ ++G       ++ ++  F + G  G A +V   + +  I+ + ET+  L+
Sbjct: 162  EADAIFQEMTSLGYRPRVKAFNVLLRCFLRKGLPGLADKVLLTLDDLGIQRNRETYEILL 221

Query: 706  RWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQ 527
             +H +         +   M+ +G +P+  ++  +I    + G W     I   ++  G  
Sbjct: 222  EYHARAKRLADTWLVIAEMRREGYHPNSFVYSKVIELYRDNGMWRKATSIVGEIRGMGLS 281

Query: 526  RSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQ------------------------- 422
                I+  ++D + +YG+     +  + ++LEG+                          
Sbjct: 282  LDRKIYNSIIDTFCKYGELGEAVEVFKTMQLEGIMPDITTWNSLIRWHCKFGDVSNALDM 341

Query: 421  ----------LSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFAT 272
                        P IF  + +  A+QG  +   +  + ++  G   +  +  +L + +  
Sbjct: 342  FISMQEQGLYPDPKIFITIISRLAEQGKWDVIKKTSENIKHRGHHRSGAIYAVLADIYGQ 401

Query: 271  AGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
             GR  +A    + +R  G+     T+  +  A+      +Q  K+   MEA G
Sbjct: 402  YGRFQDADNCINALRSEGVKLSASTFCIIANAYAQQGLCEQTIKVLQLMEAEG 454


>ref|XP_007029495.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao] gi|508718100|gb|EOY09997.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 1 [Theobroma cacao]
          Length = 513

 Score =  612 bits (1578), Expect = 0.0
 Identities = 290/441 (65%), Positives = 370/441 (83%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            EL+ +++N+ +   C+ G++D+AM L++ MEA+G  PNS SY  LI  LG+VGRTLEADA
Sbjct: 73   ELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEADA 132

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            LFQEM+  G +P+IRLFN LLK  L+KGLL +  KVLV +DE G+ +N++T+EIL+DYYV
Sbjct: 133  LFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDYYV 192

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            +AGRL DTW+V+ EMK KG   NS+VYSKII +YRDNGMW+KA+G++ E+R  G++LDR 
Sbjct: 193  NAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLDRQ 252

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GEL EALEVFEKM+++ I+PD+ TWNSLI+WHCK GD   AL+LF  M
Sbjct: 253  IYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFTEM 312

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKIFM++IS LGE GKWD IKK FENMK +G Q  GAI+ +LVDIYGQYG+F
Sbjct: 313  QEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRGHQDVGAIYAILVDIYGQYGRF 372

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ + CI ALK EG+  S ++FCVLANAYAQQG CEQTV+VLQ+MEAEGIE N++MLN+L
Sbjct: 373  QDAEVCISALKSEGLLPSASMFCVLANAYAQQGFCEQTVKVLQIMEAEGIEPNIVMLNVL 432

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH EAL++YHHIR+SGISPDV+TYSTLMKAF+ +KKFD+VP+IY EME+SGC
Sbjct: 433  INAFGIAGRHEEALSIYHHIRDSGISPDVITYSTLMKAFIRAKKFDRVPEIYREMESSGC 492

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAR+ML++AL++LE++H
Sbjct: 493  TPDRKARQMLQTALMVLEQRH 513



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 59/281 (20%), Positives = 130/281 (46%)
 Frame = -1

Query: 955 GYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEA 776
           G    S ++++ I+ Y   G    AM ++  + AMG   +   Y  +I++ G  G   EA
Sbjct: 71  GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIESLGSVGRTLEA 130

Query: 775 LEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIIST 596
             +F++M    +KP +  +N L++   + G    A+ +   M E+G   + + +  ++  
Sbjct: 131 DALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEILLDY 190

Query: 595 LGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLS 416
               G+ +    +   MK KG   +  ++  ++ +Y   G ++     ++ ++ +G+ L 
Sbjct: 191 YVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGISLD 250

Query: 415 PNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYH 236
             I+  + + + + G   + + V + M+ E I  ++   N LI     AG   +AL ++ 
Sbjct: 251 RQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALELFT 310

Query: 235 HIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            ++E G+ PD   + +L+       K+D + K +  M++ G
Sbjct: 311 EMQEQGLYPDPKIFMSLISRLGELGKWDIIKKNFENMKSRG 351



 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 57/264 (21%), Positives = 123/264 (46%), Gaps = 3/264 (1%)
 Frame = -1

Query: 850 GMALDRSIYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGA 671
           G  L   +++  I  + K G++  A+++   M+     P+  ++  LI      G  G  
Sbjct: 71  GEELTSELHNQAIQGYCKIGDVDNAMKLVAHMEAMGFHPNSISYGFLIE---SLGSVGRT 127

Query: 670 LD---LFDRMQEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVL 500
           L+   LF  M   G  P  ++F  ++     +G      K+   M  +G  ++   + +L
Sbjct: 128 LEADALFQEMICLGLKPRIRLFNVLLKGFLRKGLLRLAVKVLVVMDERGVCKNQETYEIL 187

Query: 499 VDIYGQYGKFQNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGI 320
           +D Y   G+ ++T   +  +K +G+ L+  ++  +   Y   G+  + + +++ +  +GI
Sbjct: 188 LDYYVNAGRLEDTWMVVNEMKEKGIHLNSFVYSKIICLYRDNGMWRKAIGIVEEIREKGI 247

Query: 319 ETNLIMLNMLINAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPK 140
             +  + N +I+ F   G   EAL V+  +++  I PD+ T+++L++    +    +  +
Sbjct: 248 SLDRQIYNSIIDTFGKYGELSEALEVFEKMKQESIRPDITTWNSLIQWHCKAGDLTKALE 307

Query: 139 IYSEMEASGCSPDRKAREMLKSAL 68
           +++EM+  G  PD K    L S L
Sbjct: 308 LFTEMQEQGLYPDPKIFMSLISRL 331


>gb|KHG03831.1| hypothetical protein F383_26634 [Gossypium arboreum]
          Length = 511

 Score =  608 bits (1567), Expect = 0.0
 Identities = 293/441 (66%), Positives = 366/441 (82%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRTLEAD 
Sbjct: 71   ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 130

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL+DYYV
Sbjct: 131  LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 190

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTW+V+ EMK  G   +S+VY K+I++YRDNGMWKKA+G++ E+R  G++LDR 
Sbjct: 191  SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQ 250

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GELGEALEVFEKM+++ I PD+ TWNSLIRWHCK GD   AL LF  M
Sbjct: 251  IYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQLFTEM 310

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKI M++IS LGE GKWD IKK FENMK +G+Q  GAI+ +LVDIYGQYG+F
Sbjct: 311  QEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMKCRGRQEVGAIYAMLVDIYGQYGRF 370

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ +D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+IMLN+L
Sbjct: 371  QDAEDFITALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNIIMLNVL 430

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH EAL++Y HIRESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EME+ GC
Sbjct: 431  INAFGIAGRHEEALSIYQHIRESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEMESYGC 490

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAR+ML++AL++LER+H
Sbjct: 491  TPDRKARQMLQTALMVLERRH 511



 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 63/281 (22%), Positives = 129/281 (45%)
 Frame = -1

Query: 955 GYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEA 776
           G   ++ +++K I+ Y   G    AM ++ ++ AMG   +   Y  +ID+ G  G   EA
Sbjct: 69  GEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEA 128

Query: 775 LEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIIST 596
             +F++M     KP +  +N+L++   K G  G A+     M   G   + + +  ++  
Sbjct: 129 DVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDY 188

Query: 595 LGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLS 416
               G+ +    +   MK  G Q S  ++G ++ +Y   G ++     ++ ++ +G+ L 
Sbjct: 189 YVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLD 248

Query: 415 PNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYH 236
             I+  + + + + G   + + V + M+ E I  ++   N LI     AG   +AL ++ 
Sbjct: 249 RQIYNSIIDTFGKYGELGEALEVFEKMKQESILPDITTWNSLIRWHCKAGDLTKALQLFT 308

Query: 235 HIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            ++E G+ PD     +L+       K+D + K +  M+  G
Sbjct: 309 EMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMKCRG 349


>gb|KJB76397.1| hypothetical protein B456_012G086600 [Gossypium raimondii]
          Length = 482

 Score =  605 bits (1559), Expect = 0.0
 Identities = 291/441 (65%), Positives = 365/441 (82%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRTLEAD 
Sbjct: 42   ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 101

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL+DYYV
Sbjct: 102  LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 161

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTW+V+ EMK  G   +S+VY K+I++YRDNGMWKKA+G++ E+R  G++LDR 
Sbjct: 162  SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQ 221

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GELGEALEVFEKM+++ I PD+ TWNSLIRWHCK GD   AL LF  M
Sbjct: 222  IYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEM 281

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYGQYG+F
Sbjct: 282  QEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRF 341

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ +D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+IMLN+L
Sbjct: 342  QDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNIIMLNVL 401

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EME+ GC
Sbjct: 402  INAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEMESYGC 461

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAR+ML++AL++LER+H
Sbjct: 462  TPDRKARQMLQTALMVLERRH 482



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 63/281 (22%), Positives = 128/281 (45%)
 Frame = -1

Query: 955 GYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEA 776
           G   ++ +++K I+ Y   G    AM ++ ++ AMG   +   Y  +ID+ G  G   EA
Sbjct: 40  GEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEA 99

Query: 775 LEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIIST 596
             +F++M     KP +  +N+L++   K G  G A+     M   G   + + +  ++  
Sbjct: 100 DVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDY 159

Query: 595 LGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLS 416
               G+ +    +   MK  G Q S  ++G ++ +Y   G ++     ++ ++ +G+ L 
Sbjct: 160 YVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLD 219

Query: 415 PNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYH 236
             I+  + + + + G   + + V + M+ E I  ++   N LI     AG   +AL ++ 
Sbjct: 220 RQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFT 279

Query: 235 HIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            ++E G+ PD     +L+       K+D + K +  M   G
Sbjct: 280 EMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRG 320


>ref|XP_012459106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X4 [Gossypium raimondii]
          Length = 485

 Score =  605 bits (1559), Expect = 0.0
 Identities = 291/441 (65%), Positives = 365/441 (82%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRTLEAD 
Sbjct: 42   ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 101

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL+DYYV
Sbjct: 102  LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 161

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTW+V+ EMK  G   +S+VY K+I++YRDNGMWKKA+G++ E+R  G++LDR 
Sbjct: 162  SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQ 221

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GELGEALEVFEKM+++ I PD+ TWNSLIRWHCK GD   AL LF  M
Sbjct: 222  IYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEM 281

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYGQYG+F
Sbjct: 282  QEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRF 341

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ +D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+IMLN+L
Sbjct: 342  QDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNIIMLNVL 401

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EME+ GC
Sbjct: 402  INAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEMESYGC 461

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAR+ML++AL++LER+H
Sbjct: 462  TPDRKARQMLQTALMVLERRH 482



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 63/281 (22%), Positives = 128/281 (45%)
 Frame = -1

Query: 955 GYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEA 776
           G   ++ +++K I+ Y   G    AM ++ ++ AMG   +   Y  +ID+ G  G   EA
Sbjct: 40  GEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEA 99

Query: 775 LEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIIST 596
             +F++M     KP +  +N+L++   K G  G A+     M   G   + + +  ++  
Sbjct: 100 DVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDY 159

Query: 595 LGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLS 416
               G+ +    +   MK  G Q S  ++G ++ +Y   G ++     ++ ++ +G+ L 
Sbjct: 160 YVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLD 219

Query: 415 PNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYH 236
             I+  + + + + G   + + V + M+ E I  ++   N LI     AG   +AL ++ 
Sbjct: 220 RQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFT 279

Query: 235 HIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            ++E G+ PD     +L+       K+D + K +  M   G
Sbjct: 280 EMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRG 320


>gb|KJB76398.1| hypothetical protein B456_012G086600 [Gossypium raimondii]
          Length = 487

 Score =  605 bits (1559), Expect = 0.0
 Identities = 291/441 (65%), Positives = 365/441 (82%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRTLEAD 
Sbjct: 47   ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 106

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL+DYYV
Sbjct: 107  LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 166

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTW+V+ EMK  G   +S+VY K+I++YRDNGMWKKA+G++ E+R  G++LDR 
Sbjct: 167  SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQ 226

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GELGEALEVFEKM+++ I PD+ TWNSLIRWHCK GD   AL LF  M
Sbjct: 227  IYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEM 286

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYGQYG+F
Sbjct: 287  QEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRF 346

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ +D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+IMLN+L
Sbjct: 347  QDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNIIMLNVL 406

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EME+ GC
Sbjct: 407  INAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEMESYGC 466

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAR+ML++AL++LER+H
Sbjct: 467  TPDRKARQMLQTALMVLERRH 487



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 63/281 (22%), Positives = 128/281 (45%)
 Frame = -1

Query: 955 GYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEA 776
           G   ++ +++K I+ Y   G    AM ++ ++ AMG   +   Y  +ID+ G  G   EA
Sbjct: 45  GEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEA 104

Query: 775 LEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIIST 596
             +F++M     KP +  +N+L++   K G  G A+     M   G   + + +  ++  
Sbjct: 105 DVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDY 164

Query: 595 LGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLS 416
               G+ +    +   MK  G Q S  ++G ++ +Y   G ++     ++ ++ +G+ L 
Sbjct: 165 YVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLD 224

Query: 415 PNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYH 236
             I+  + + + + G   + + V + M+ E I  ++   N LI     AG   +AL ++ 
Sbjct: 225 RQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFT 284

Query: 235 HIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            ++E G+ PD     +L+       K+D + K +  M   G
Sbjct: 285 EMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRG 325


>ref|XP_012459104.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Gossypium raimondii]
            gi|823252980|ref|XP_012459105.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Gossypium raimondii]
          Length = 490

 Score =  605 bits (1559), Expect = 0.0
 Identities = 291/441 (65%), Positives = 365/441 (82%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRTLEAD 
Sbjct: 47   ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 106

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL+DYYV
Sbjct: 107  LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 166

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTW+V+ EMK  G   +S+VY K+I++YRDNGMWKKA+G++ E+R  G++LDR 
Sbjct: 167  SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQ 226

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GELGEALEVFEKM+++ I PD+ TWNSLIRWHCK GD   AL LF  M
Sbjct: 227  IYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEM 286

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYGQYG+F
Sbjct: 287  QEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRF 346

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ +D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+IMLN+L
Sbjct: 347  QDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNIIMLNVL 406

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EME+ GC
Sbjct: 407  INAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEMESYGC 466

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAR+ML++AL++LER+H
Sbjct: 467  TPDRKARQMLQTALMVLERRH 487



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 63/281 (22%), Positives = 128/281 (45%)
 Frame = -1

Query: 955 GYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEA 776
           G   ++ +++K I+ Y   G    AM ++ ++ AMG   +   Y  +ID+ G  G   EA
Sbjct: 45  GEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEA 104

Query: 775 LEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIIST 596
             +F++M     KP +  +N+L++   K G  G A+     M   G   + + +  ++  
Sbjct: 105 DVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDY 164

Query: 595 LGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLS 416
               G+ +    +   MK  G Q S  ++G ++ +Y   G ++     ++ ++ +G+ L 
Sbjct: 165 YVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLD 224

Query: 415 PNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYH 236
             I+  + + + + G   + + V + M+ E I  ++   N LI     AG   +AL ++ 
Sbjct: 225 RQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFT 284

Query: 235 HIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            ++E G+ PD     +L+       K+D + K +  M   G
Sbjct: 285 EMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRG 325


>ref|XP_012459103.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Gossypium raimondii]
            gi|763809494|gb|KJB76396.1| hypothetical protein
            B456_012G086600 [Gossypium raimondii]
          Length = 511

 Score =  605 bits (1559), Expect = 0.0
 Identities = 291/441 (65%), Positives = 365/441 (82%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRTLEAD 
Sbjct: 71   ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 130

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL+DYYV
Sbjct: 131  LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 190

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTW+V+ EMK  G   +S+VY K+I++YRDNGMWKKA+G++ E+R  G++LDR 
Sbjct: 191  SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQ 250

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GELGEALEVFEKM+++ I PD+ TWNSLIRWHCK GD   AL LF  M
Sbjct: 251  IYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEM 310

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYGQYG+F
Sbjct: 311  QEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRF 370

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ +D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+IMLN+L
Sbjct: 371  QDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNIIMLNVL 430

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EME+ GC
Sbjct: 431  INAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEMESYGC 490

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAR+ML++AL++LER+H
Sbjct: 491  TPDRKARQMLQTALMVLERRH 511



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 63/281 (22%), Positives = 128/281 (45%)
 Frame = -1

Query: 955 GYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEA 776
           G   ++ +++K I+ Y   G    AM ++ ++ AMG   +   Y  +ID+ G  G   EA
Sbjct: 69  GEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEA 128

Query: 775 LEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIIST 596
             +F++M     KP +  +N+L++   K G  G A+     M   G   + + +  ++  
Sbjct: 129 DVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDY 188

Query: 595 LGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLS 416
               G+ +    +   MK  G Q S  ++G ++ +Y   G ++     ++ ++ +G+ L 
Sbjct: 189 YVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLD 248

Query: 415 PNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYH 236
             I+  + + + + G   + + V + M+ E I  ++   N LI     AG   +AL ++ 
Sbjct: 249 RQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFT 308

Query: 235 HIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            ++E G+ PD     +L+       K+D + K +  M   G
Sbjct: 309 EMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRG 349


>ref|XP_012459102.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Gossypium raimondii]
            gi|763809493|gb|KJB76395.1| hypothetical protein
            B456_012G086600 [Gossypium raimondii]
          Length = 514

 Score =  605 bits (1559), Expect = 0.0
 Identities = 291/441 (65%), Positives = 365/441 (82%)
 Frame = -1

Query: 1369 ELSCDMYNEMLCELCEEGEIDDAMALLSQMEALGCRPNSTSYSCLITGLGNVGRTLEADA 1190
            ELS +++N+ + E C+ G++D+AM L++Q+EA+G  PNS SY  LI  LG+VGRTLEAD 
Sbjct: 71   ELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEADV 130

Query: 1189 LFQEMLISGCRPKIRLFNALLKSCLKKGLLEMCDKVLVAIDELGLERNRKTFEILIDYYV 1010
            LFQEM+  G +P+IRLFNALLK  LKKGLL +  K LV +D +G+ +N++T+EIL+DYYV
Sbjct: 131  LFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDYYV 190

Query: 1009 SAGRLNDTWLVIAEMKRKGYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRS 830
            SAGRL DTW+V+ EMK  G   +S+VY K+I++YRDNGMWKKA+G++ E+R  G++LDR 
Sbjct: 191  SAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLDRQ 250

Query: 829  IYSSIIDTFGKHGELGEALEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRM 650
            IY+SIIDTFGK+GELGEALEVFEKM+++ I PD+ TWNSLIRWHCK GD   AL LF  M
Sbjct: 251  IYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFTEM 310

Query: 649  QEQGTYPDPKIFMTIISTLGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKF 470
            QEQG YPDPKI M++IS LGE GKWD IKK FENM  +G+Q  GAI+ +LVDIYGQYG+F
Sbjct: 311  QEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRGRQEVGAIYAMLVDIYGQYGRF 370

Query: 469  QNTDDCIQALKLEGVQLSPNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNML 290
            Q+ +D I ALK EG   S ++FCVLANAYAQQG CEQTV+VLQLMEAEGIE N+IMLN+L
Sbjct: 371  QDAEDFISALKSEGFLPSASMFCVLANAYAQQGFCEQTVKVLQLMEAEGIELNIIMLNVL 430

Query: 289  INAFATAGRHMEALAVYHHIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASGC 110
            INAF  AGRH EAL++Y HI+ESGISPDVVTYSTLMKAF+ +KKFD+VP+IY EME+ GC
Sbjct: 431  INAFGIAGRHEEALSIYQHIKESGISPDVVTYSTLMKAFIRAKKFDKVPEIYKEMESYGC 490

Query: 109  SPDRKAREMLKSALLILERKH 47
            +PDRKAR+ML++AL++LER+H
Sbjct: 491  TPDRKARQMLQTALMVLERRH 511



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 63/281 (22%), Positives = 128/281 (45%)
 Frame = -1

Query: 955 GYSPNSYVYSKIIKIYRDNGMWKKAMGVLGEVRAMGMALDRSIYSSIIDTFGKHGELGEA 776
           G   ++ +++K I+ Y   G    AM ++ ++ AMG   +   Y  +ID+ G  G   EA
Sbjct: 69  GEELSTELHNKTIQEYCKIGDVDNAMKLVAQLEAMGFHPNSISYGFLIDSLGSVGRTLEA 128

Query: 775 LEVFEKMQEDCIKPDVETWNSLIRWHCKFGDCGGALDLFDRMQEQGTYPDPKIFMTIIST 596
             +F++M     KP +  +N+L++   K G  G A+     M   G   + + +  ++  
Sbjct: 129 DVLFQEMMYLGFKPRIRLFNALLKGFLKKGLLGLAVKFLVEMDRMGVCKNQETYEILLDY 188

Query: 595 LGEQGKWDGIKKIFENMKRKGQQRSGAIFGVLVDIYGQYGKFQNTDDCIQALKLEGVQLS 416
               G+ +    +   MK  G Q S  ++G ++ +Y   G ++     ++ ++ +G+ L 
Sbjct: 189 YVSAGRLEDTWMVVNEMKTNGIQLSSFVYGKVIRLYRDNGMWKKAIGLVEEIREKGISLD 248

Query: 415 PNIFCVLANAYAQQGLCEQTVRVLQLMEAEGIETNLIMLNMLINAFATAGRHMEALAVYH 236
             I+  + + + + G   + + V + M+ E I  ++   N LI     AG   +AL ++ 
Sbjct: 249 RQIYNSIIDTFGKYGELGEALEVFEKMKQESIVPDITTWNSLIRWHCKAGDLTKALQLFT 308

Query: 235 HIRESGISPDVVTYSTLMKAFLWSKKFDQVPKIYSEMEASG 113
            ++E G+ PD     +L+       K+D + K +  M   G
Sbjct: 309 EMQEQGLYPDPKILMSLISRLGELGKWDVIKKNFENMTCRG 349