BLASTX nr result
ID: Rehmannia28_contig00017772
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00017772
(4981 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 1903 0.0
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 1784 0.0
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 1758 0.0
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 1717 0.0
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 1543 0.0
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo... 1513 0.0
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo... 1512 0.0
emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera] 1485 0.0
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo... 1476 0.0
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 1463 0.0
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo... 1405 0.0
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 1384 0.0
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera] 1365 0.0
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 1324 0.0
gb|AAK29467.1| polyprotein-like [Solanum chilense] 1226 0.0
gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposo... 1216 0.0
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo... 1175 0.0
emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera] 1157 0.0
gb|KYP59064.1| Retrovirus-related Pol polyprotein from transposo... 1155 0.0
emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera] 1133 0.0
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 1903 bits (4930), Expect = 0.0
Identities = 930/1334 (69%), Positives = 1084/1334 (81%), Gaps = 19/1334 (1%)
Frame = -3
Query: 4316 MEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGYIRQWVDDNVLNHISDETHARSL 4137
MEDLLYVKDYY VF + +P+NKTDAEW +LHRQVCGYIR WVDDN LNH+S+E H RS
Sbjct: 1 MEDLLYVKDYYLXVFXSERPENKTDAEWNLLHRQVCGYIRXWVDDNXLNHVSEEKHXRSX 60
Query: 4136 WQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQGIINQLAGMNIKFDDEVQ 3957
W KLEQLYARKT NNKLFLIK+MMSLKY+DGT TDHLN FQGIINQLAGMNIKF++EVQ
Sbjct: 61 WNKLEQLYARKTXNNKLFLIKKMMSLKYQDGTXXTDHLNTFQGIINQLAGMNIKFEEEVQ 120
Query: 3956 GLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMRRKSQGSFTQSDVLVTEK 3777
GLW+LGTLPDSWETFRTSLSNSAPDG++ MDL K VLNEEMRRKSQGS +QS+VLV K
Sbjct: 121 GLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSNVLVIXK 180
Query: 3776 RGRSKSRGPKGKDRGRSKSNRYANAECYHCGIKGHIKKHCRKWXXXXXXXXXXXXXXXXX 3597
GRSKSRGPK +DR +SK+N++AN EC++C +KGHIKK+CR+
Sbjct: 181 XGRSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDNG 240
Query: 3596 XXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSGASIHATSQKYLFASYTSGDFGNVR 3417
D+V+T DFLI ++ DVVN AC E+ WV+D GASIHAT QK F SYTSGDFG+VR
Sbjct: 241 GEDDQVATTISDFLIVYDSDVVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVR 300
Query: 3416 MGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRLNLISVGKLDDEGFCSMFSNGQW 3237
MG++G AKA+GMGDV LETSNGT+L LKNVKH+PD+R+NLIS GKLDDEGFC+ F + QW
Sbjct: 301 MGNDGSAKAIGMGDVRLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQW 360
Query: 3236 KLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNKIELWHSRLSHISEKGLKILAKE 3057
KLTRGS+V+A+G+K SSLYLMQA+ D SINA++D + ELWH++L H+SEKGL ILAK+
Sbjct: 361 KLTRGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNKLGHMSEKGLMILAKK 420
Query: 3056 NLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGILDLVYSDVCGPMKTKTLGGALY 2877
NL+ +K +L++C HCLAGKQTRVAF+T +R PG+LDLVYSDV GPMKTKTLGG+LY
Sbjct: 421 NLLXGMKKGSLKRCAHCLAGKQTRVAFKTLHHTRKPGMLDLVYSDVYGPMKTKTLGGSLY 480
Query: 2876 FVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQTGKKLKCIRTDNGGEYLGSFDEY 2697
FVTFIDDHSRK WVYTLKTKDQV DVFKQFHALVERQ+G+KLKCIRTDNGGEY G FDEY
Sbjct: 481 FVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEY 540
Query: 2696 CRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSEAGLPRSFWGEALSTVVHVLNL 2517
CRQ G RHQKTPPKTPQLNGLAERMNRTLVERVRCLLS++ LPRSFWGEAL+T+VHVLNL
Sbjct: 541 CRQHGFRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTIVHVLNL 600
Query: 2516 TPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPKDERSKLDGKTRQCVFLGYGQDE 2337
TPCVPL+FDVPDR+WS +ISY+HLRVFGCK FVHIPKDERSKLD KTR CVF+GYGQDE
Sbjct: 601 TPCVPLEFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDE 660
Query: 2336 FGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKAD-KTTKSNDDLVDLDVTPPQHVPVQVD 2160
GY+FYD V+KKL RS D VF+ED TI+DIEK + ++ + DL+DLD P ++P QV+
Sbjct: 661 LGYKFYDLVQKKLXRSXDVVFMEDHTIQDIEKTNPMESQHSGDLIDLDPAPLTNLPTQVE 720
Query: 2159 DDAQNNQPDLDDIDAPTQVEEDNVDETMPPADDQT---VEV---------------EAPI 2034
D A ++Q D+ D++ PTQVE++ D+ D +T VEV + P+
Sbjct: 721 DGAHDDQHDMGDVETPTQVEDETHDDQHDMGDVETPTQVEVDDDVHEQSPTAEAPSDIPL 780
Query: 2033 XXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHENDTYD 1854
RY +Y LLTD GEPE+Y EA++D +K +W+DAM+DE++SLHEN +++
Sbjct: 781 RRSTRDRHPSTRYSVDDYVLLTDEGEPESYVEAMKDENKMKWVDAMRDEMESLHENHSFE 840
Query: 1853 LVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVVKMSSI 1674
LVKLP+GKRALKN+WVYRVKQ+EHTS+PR+KARLVVK K+
Sbjct: 841 LVKLPKGKRALKNRWVYRVKQEEHTSQPRYKARLVVKRVQSKE----------------- 883
Query: 1673 RVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKSLYGLK 1494
S DLEI+QMDVKTAFLHG+LD+EIYM+QPEGF +KGKE+YVCKLKKSLYGLK
Sbjct: 884 --------SFDLEIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLK 935
Query: 1493 QAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNTSRIDR 1314
QAPR WY+KFESVMGEQGY+KTTSDHCVFVQKFSDDDF+ILLLYVDD+LIV RN SRID
Sbjct: 936 QAPRQWYKKFESVMGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVCRNVSRIDN 995
Query: 1313 LKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAKVVSSP 1134
LKKQLSKSFAMKDLGP K+ILGI+I RDR +K+L M QEQYI KV RFNM K KVVSSP
Sbjct: 996 LKKQLSKSFAMKDLGPVKRILGIRIERDRASKKLCMLQEQYIEKVFARFNMSKFKVVSSP 1055
Query: 1133 LATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPG 954
LA+HFKL + SPSTD+EKEDM R+PYASA+GSLMYAMVCTRPDIAYAVGVVSR+LSNPG
Sbjct: 1056 LASHFKLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPG 1115
Query: 953 KEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTSGYLITFAGGA 774
+ HW AVKWI+RYLRGTS L+LTFG GKP+LVGYTDSDMA DVD RKSTSGYL+TF+GGA
Sbjct: 1116 RHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGA 1175
Query: 773 VSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQSAIHLG 594
VSWQSRLQKCVALS ACKELLWMK FM+ELGF Q+RYVV+CDNQSAIHL
Sbjct: 1176 VSWQSRLQKCVALSTTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLS 1235
Query: 593 KNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVCRLIAG 414
KNST+HARSKHIDVRYHWMRD +ND L E++KIHTD+NG+DM+TK LPREKL VC IAG
Sbjct: 1236 KNSTYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAG 1295
Query: 413 MVNPST*SERGRFV 372
M++ + R RFV
Sbjct: 1296 MISS---NGRSRFV 1306
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 1784 bits (4620), Expect = 0.0
Identities = 887/1334 (66%), Positives = 1044/1334 (78%), Gaps = 19/1334 (1%)
Frame = -3
Query: 4316 MEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGYIRQWVDDNVLNHISDETHARSL 4137
MEDLLYVKDYY PVF + +P+NK DAEW +LHRQVCGYIRQWVDDNVLNH+S+E HARSL
Sbjct: 1 MEDLLYVKDYYXPVFASERPENKXDAEWNLLHRQVCGYIRQWVDDNVLNHVSEEKHARSL 60
Query: 4136 WQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQGIINQLAGMNIKFDDEVQ 3957
W KLEQLYARKTGNNKL LIK+MMSLKY+DGTPMTDHLN FQGIINQL GMNIKF++EVQ
Sbjct: 61 WNKLEQLYARKTGNNKLLLIKKMMSLKYQDGTPMTDHLNTFQGIINQLVGMNIKFEEEVQ 120
Query: 3956 GLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMRRKSQGSFTQSDVLVTEK 3777
GLW+LGTLP+ WETFRTSLSNSA DG++ MDL K VLNEEMRRKSQGS +QS+VLVTEK
Sbjct: 121 GLWLLGTLPNLWETFRTSLSNSALDGIMNMDLVKSCVLNEEMRRKSQGSSSQSNVLVTEK 180
Query: 3776 RGRSKSRGPKGKDRGRSKSNRYANAECYHCGIKGHIKKHCRKWXXXXXXXXXXXXXXXXX 3597
+G+SKSRGPK +DR +SK+N++AN EC++C +KGHIKK+CR+
Sbjct: 181 KGKSKSRGPKNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDNG 240
Query: 3596 XXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSGASIHATSQKYLFASYTSGDFGNVR 3417
D+V+T T DFLI ++ DVVN AC E SWV+DSGASIHAT +K F SYTSGDFG+VR
Sbjct: 241 GEDDQVATTTSDFLIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVR 300
Query: 3416 MGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRLNLISVGKLDDEGFCSMFSNGQW 3237
MG++G AKA+GMGD L P + ++S L
Sbjct: 301 MGNDGSAKAIGMGDESLMMKGSA---------TPSV---IVSGSSL-------------- 334
Query: 3236 KLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNKIELWHSRLSHISEKGLKILAKE 3057
RGS+V+A+G+K SSLYLMQA+ D SINA++D + ELWH+RL H+SEKGL ILAK
Sbjct: 335 ---RGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKN 391
Query: 3056 NLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGILDLVYSDVCGPMKTKTLGGALY 2877
NL+ +K +L++C HCLAGKQTRVAF+T +R PG+ DLVYSDVCGPMKTKTLGG+LY
Sbjct: 392 NLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPGMFDLVYSDVCGPMKTKTLGGSLY 451
Query: 2876 FVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQTGKKLKCIRTDNGGEYLGSFDEY 2697
FVTFIDDHSRK WVYTLKTKDQV DVFKQFHALVERQ+G+KLKCIRTDNGGEY G FDEY
Sbjct: 452 FVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEY 511
Query: 2696 CRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSEAGLPRSFWGEALSTVVHVLNL 2517
CRQ IRHQKTPPKTPQLNGLAERMNRTLVERVRCLLS++ LPRSFW EAL+TVVHVLNL
Sbjct: 512 CRQHDIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWDEALNTVVHVLNL 571
Query: 2516 TPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPKDERSKLDGKTRQCVFLGYGQDE 2337
TPCVPL+FDV DR+WS +ISY+HLRVFGCK FVHIPKDERSKLD KTR CVF+GYGQDE
Sbjct: 572 TPCVPLEFDVSDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDVKTRPCVFIGYGQDE 631
Query: 2336 FGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKAD-KTTKSNDDLVDLDVTPPQHVPVQVD 2160
GYRFYDPV+KKL+RSRD VF+ED TI+DIEK + ++ + DL+DLD+ P +++P QV+
Sbjct: 632 LGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSGDLIDLDLAPLKNLPTQVE 691
Query: 2159 DDAQNNQPDLDDIDAPTQVEEDNVDE----------TMPPADDQTVE--------VEAPI 2034
D+A ++Q D+ D++ PTQVE++ D+ T DD E + P+
Sbjct: 692 DEAHDDQHDMGDVETPTQVEDETHDDQHDMGDVEIPTQVEVDDDVHEQSPAAEAPSDIPL 751
Query: 2033 XXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHENDTYD 1854
RY +Y LLTDG EPE+Y EA++D +K +W+D M+DE++SLHEN +++
Sbjct: 752 RRFTRDRHPSTRYSVDDYVLLTDGEEPESYVEAMKDENKMKWVDXMRDEMESLHENHSFE 811
Query: 1853 LVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVVKMSSI 1674
LVKLP+GKR LKN+WVYRVKQ+EHTS+PR+KARLVVKGF+QKKGIDFDEIFSPVVKMSSI
Sbjct: 812 LVKLPKGKRXLKNRWVYRVKQEEHTSQPRYKARLVVKGFNQKKGIDFDEIFSPVVKMSSI 871
Query: 1673 RVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKSLYGLK 1494
RVVLGLAASLDLEI+QMDVKTAFLHG+LD+EIYM+QPEGF +KGKE+YVCKLKKSLYGLK
Sbjct: 872 RVVLGLAASLDLEIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLK 931
Query: 1493 QAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNTSRIDR 1314
QAPR WY+KFESVMGE N SRID
Sbjct: 932 QAPRQWYKKFESVMGE-------------------------------------NVSRIDN 954
Query: 1313 LKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAKVVSSP 1134
LKKQLSKSFAMKDLGP K+ILGI+I RDR +K+L M Q+QYI KVL +FNM KAKVVSSP
Sbjct: 955 LKKQLSKSFAMKDLGPVKRILGIRIERDRASKKLCMLQKQYIEKVLAKFNMSKAKVVSSP 1014
Query: 1133 LATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPG 954
LA+HFKL + +PSTD+EKEDM R+ YAS VGSL+Y MVC RPDIAYAVGVVSR+LSNPG
Sbjct: 1015 LASHFKLSSRHNPSTDKEKEDMRRVLYASVVGSLIYVMVCIRPDIAYAVGVVSRFLSNPG 1074
Query: 953 KEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTSGYLITFAGGA 774
+ HW AVKWI+RYLRG S L+LTFG GKP+LVGYTDSDMA DVD R+STS YL+TF+GGA
Sbjct: 1075 RHHWEAVKWIMRYLRGISKLKLTFGSGKPILVGYTDSDMAGDVDNRRSTSSYLMTFSGGA 1134
Query: 773 VSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQSAIHLG 594
VSWQSRLQKCVALS ACKELLWMK FM+EL F Q+RYVV+CDNQ+AIHL
Sbjct: 1135 VSWQSRLQKCVALSTTEAEYIAAAEACKELLWMKCFMQELXFKQQRYVVYCDNQNAIHLS 1194
Query: 593 KNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVCRLIAG 414
KNS +HARSKHIDVRYHWMRD +N+ L E++KIHTD+NG+DM+TK LPREKL VC IAG
Sbjct: 1195 KNSXYHARSKHIDVRYHWMRDALNNNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAG 1254
Query: 413 MVNPST*SERGRFV 372
M++ ++R RFV
Sbjct: 1255 MISS---NDRSRFV 1265
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 1758 bits (4552), Expect = 0.0
Identities = 855/1340 (63%), Positives = 1053/1340 (78%), Gaps = 13/1340 (0%)
Frame = -3
Query: 4382 METNTSRMVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGY 4203
ME TS+MVNLNG+NY +W+ KM+DLL+V + PVF + KP++K+D +W+ H QVCGY
Sbjct: 1 MEARTSKMVNLNGTNYHLWRNKMKDLLFVTKMHLPVFSSQKPEDKSDEDWEFEHNQVCGY 60
Query: 4202 IRQWVDDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHL 4023
IRQ+V+DNV NHIS THARSLW KLE+LYA KTGNNKLF + ++M +KY +GT + DHL
Sbjct: 61 IRQFVEDNVYNHISGVTHARSLWDKLEELYASKTGNNKLFYLTKLMQVKYVEGTTVADHL 120
Query: 4022 NAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVL 3843
N QGI++QL+GM IKFDDEV L +L TLP+SWET + S++NSAP+GV+ M+ K +L
Sbjct: 121 NEIQGIVDQLSGMGIKFDDEVLALMVLATLPESWETLKVSITNSAPNGVVNMETVKSGIL 180
Query: 3842 NEEMRRKSQG-SFTQSDVLVTEKRGRSKSRGPKGKDRGRSKSNRYANAECYHCGIKGHIK 3666
NEEMRR+SQG S +QS+VL RGRS+++ +D+ R KSN++AN EC++C KGHIK
Sbjct: 181 NEEMRRRSQGTSSSQSEVLAVTTRGRSQNKSQSNRDKSRGKSNKFANVECHYCKKKGHIK 240
Query: 3665 KHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSGA 3486
+ CR++ + S G+F + ++ D++NL E +WV+DSGA
Sbjct: 241 RFCRQFQNDQKKNKGKKVKPEESSDDETNSF--GEFNVVYDDDIINLTTQEMTWVIDSGA 298
Query: 3485 SIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLR 3306
+IHAT ++ LF+SYT GDFG V+MG+ + VG GDV LET NG L+L++V+HVPD+R
Sbjct: 299 TIHATPRRELFSSYTLGDFGRVKMGNANFSTVVGKGDVCLETMNGMKLLLRDVRHVPDMR 358
Query: 3305 LNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGN 3126
LNLISV KLD+EG+C+ F NGQWKLT+GSL+VARG K S LY+ QA + IN + +
Sbjct: 359 LNLISVDKLDEEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVTQASISQQVINVAENDS 418
Query: 3125 KIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPG 2946
I+LWH RL H+SEK + L K+N +P + L+KC CLAGKQ RV+F+ PSR
Sbjct: 419 NIKLWHRRLGHMSEKSMARLVKKNALPGLNQIQLKKCADCLAGKQNRVSFKRFPPSRRQN 478
Query: 2945 ILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQ 2766
+LDLV+SDVCGP K K+LGGA YFVTFIDDHSRK+WVYTLKTKDQVF VFKQF LVER+
Sbjct: 479 VLDLVHSDVCGPFK-KSLGGARYFVTFIDDHSRKTWVYTLKTKDQVFQVFKQFLTLVERE 537
Query: 2765 TGKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLL 2586
TGKKLKCIRTDNGGEY G FD YC++ GIRHQ TPPKTPQLNGLAERMNRTL+ER RCLL
Sbjct: 538 TGKKLKCIRTDNGGEYQGQFDAYCKEHGIRHQFTPPKTPQLNGLAERMNRTLIERTRCLL 597
Query: 2585 SEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIP 2406
S + LP++FWGEAL T +VLN +PCVPL + P+++W G+DISY+ LRVFGCK +VH+P
Sbjct: 598 SHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVP 657
Query: 2405 KDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKTT 2226
KDERSKLD KTR+CVF+GYGQD GY+FYDPVEKKL+RSRD VFVEDQTI DI+K +K+T
Sbjct: 658 KDERSKLDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKST 717
Query: 2225 KSNDDLVDLDVTPPQHVPVQVDDDAQNNQPDL-----DDIDAPTQVEEDNVDETMPPADD 2061
DD + ++ PP VP QV DD Q+NQP+ +D A T+ EDN D+ D
Sbjct: 718 ---DDSAEFEL-PPTVVPRQVGDDVQDNQPEAPGLPNEDELADTEGNEDNGDDDA----D 769
Query: 2060 QTVEVEAPIXXXXXXXXXXXR-------YPASEYALLTDGGEPETYEEAIEDAHKNEWLD 1902
+ + + PI R Y EY LLTDGGEP+++EEAI+D HK +W++
Sbjct: 770 EEDQPQPPILNNPPYHTRSGRVVQQSTRYSPHEYVLLTDGGEPDSFEEAIDDEHKEKWIE 829
Query: 1901 AMKDEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKG 1722
AM+DEIKSLHEN T++LVKLP+GKRALKNKWV+++K DEH S PRFKARLVVKGF+Q+KG
Sbjct: 830 AMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKMKHDEHNSLPRFKARLVVKGFNQRKG 889
Query: 1721 IDFDEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKG 1542
IDFDEIFSPVVKM+SIR VLGLAASL+LE+EQMDVKTAFLHG+L+ EIYM+QP+GF+ KG
Sbjct: 890 IDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKG 949
Query: 1541 KENYVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLY 1362
KE+YVC+L+KSLYGLKQAPR WY+KFESVMG+ GY+KTTSDHCVF QKFSDDDFIILLLY
Sbjct: 950 KEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKTTSDHCVFAQKFSDDDFIILLLY 1009
Query: 1361 VDDMLIVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVK 1182
VDDMLIVGRN SRI+ LK+QLSK FAMKDLGPAKQILG++I RDR K+L++SQE+YI K
Sbjct: 1010 VDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEK 1069
Query: 1181 VLERFNMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPD 1002
VL+RFNM K K VS PLA HF+L QSPSTD+E+ M RIPYASAVGSLMYAMVCTRPD
Sbjct: 1070 VLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPD 1129
Query: 1001 IAYAVGVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVD 822
IA+AVGVVSR+LSNPGKEHW+AVKWILRYLRGTS L L FG P+LVGYTD+DMA DVD
Sbjct: 1130 IAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVD 1189
Query: 821 TRKSTSGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQ 642
+RKSTSGYLI F+GGAVSWQS+LQKCVALS ACKEL+WMKKF+ ELGF+Q
Sbjct: 1190 SRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQ 1249
Query: 641 ERYVVFCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMT 462
+ Y +FCD+QSAIHL KN++FH+RSKHIDVRY+W+RDV+ K+L L+KIHTD+NG+DM+T
Sbjct: 1250 DGYQLFCDSQSAIHLAKNASFHSRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLT 1309
Query: 461 KALPREKLDVCRLIAGMVNP 402
K LP+ K + CR AG+V+P
Sbjct: 1310 KTLPKGKFEFCREAAGIVDP 1329
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 1717 bits (4448), Expect = 0.0
Identities = 840/1324 (63%), Positives = 1030/1324 (77%), Gaps = 8/1324 (0%)
Frame = -3
Query: 4382 METNTSRMVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGY 4203
METNTS MV LNG NY IWK KM+DLL+VK + PVF ++KP+N +D EW H+QVCGY
Sbjct: 1 METNTSNMVRLNGRNYHIWKAKMKDLLFVKKLHLPVFASAKPENMSDEEWDFEHQQVCGY 60
Query: 4202 IRQWVDDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHL 4023
IRQWV+DNVLNHI +ETHARSLW KLE LYA KTGNNKLFL+KQMM+++Y++GT + DH+
Sbjct: 61 IRQWVEDNVLNHIINETHARSLWNKLETLYASKTGNNKLFLLKQMMNIRYREGTLINDHV 120
Query: 4022 NAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVL 3843
N FQG+++QL+GM IKF+DEV GLW+L TLPDSWETFR SL+NSAP+GV+TM+ K +L
Sbjct: 121 NDFQGVLDQLSGMGIKFEDEVLGLWLLNTLPDSWETFRVSLTNSAPNGVVTMEYVKSGIL 180
Query: 3842 NEEMRRKSQGSFT-QSDVLVTEKRGRSKSRGPKGKDRGRSKS-NRYANAECYHCGIKGHI 3669
NEE RR+SQ + T QSD+LVT+ RGR+K +G +G+D+ RSKS +RY + EC++CG K HI
Sbjct: 181 NEEARRRSQDTSTSQSDILVTDDRGRNKQKGQRGRDKSRSKSRSRYKDIECHYCGKKSHI 240
Query: 3668 KKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSG 3489
KK+ KW +V+TV D L+A + +V+N+AC+E +W+VDSG
Sbjct: 241 KKYSFKWKREKKQDNKDGDTGN------QVATVRADLLVACDDNVINVACHETTWIVDSG 294
Query: 3488 ASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDL 3309
A+ H T +K F SYT GDFG +RMG++G K G G V LETSNGT L+LKNVKH PD+
Sbjct: 295 AAYHVTPRKEFFTSYTPGDFGELRMGNDGQVKVTGTGTVCLETSNGTKLVLKNVKHAPDI 354
Query: 3308 RLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDG 3129
RLNLIS GKLDD+GFC F +G WK+T+GSLVVARG+K S+LY +Q+ D S+N +
Sbjct: 355 RLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQSSVSDDSVNVVEKE 414
Query: 3128 NKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMP 2949
ELWH RL H+S KG+ LAK++ + +K L+KC HCLAGKQ RV+F + P+R
Sbjct: 415 CASELWHKRLGHMSVKGIDYLAKKSKLSGVKEAKLDKCVHCLAGKQRRVSFMSHPPTRKS 474
Query: 2948 GILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVER 2769
LDL++SDVCGPMK ++LGGA YFVTFIDD+SRK WVYTLK K V VFK+FHALVER
Sbjct: 475 EPLDLIHSDVCGPMKVRSLGGASYFVTFIDDYSRKLWVYTLKHKSDVLGVFKEFHALVER 534
Query: 2768 QTGKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCL 2589
QTGKKLKCIRTDNGGEY G FDEYCR+ GIRHQKTPPK PQLNGLAERMNRT++ERVRC+
Sbjct: 535 QTGKKLKCIRTDNGGEYCGPFDEYCRRYGIRHQKTPPKIPQLNGLAERMNRTIMERVRCM 594
Query: 2588 LSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHI 2409
L +A LP SFW EA+ST VHV+NL+P + L +VPD+VW GKD+SY+HLRVFGCK FVH+
Sbjct: 595 LDDAKLPSSFWAEAVSTAVHVINLSPVIALKNEVPDKVWCGKDVSYDHLRVFGCKAFVHV 654
Query: 2408 PKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKT 2229
P+DERSKLD KTRQC+F+GYG DEFGYR YDPVEKKL+RSRD VF E+QTI DI+K +
Sbjct: 655 PRDERSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQP 714
Query: 2228 -TKSNDDLVDLDVTPPQHVPV--QVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPADDQ 2058
++ + LVD++ ++ +V ++ QN P + D T + + D+ + +Q
Sbjct: 715 ESRDSGSLVDIEPVSRRYTDDVDEVQENVQNGDP-VPDYQGDTVDVDGHADDVVH--QEQ 771
Query: 2057 TVEVEAPIXXXXXXXXXXXR---YPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDE 1887
V + P+ Y S+Y LLTDGGEPE+YEEA+E K +W +AM++E
Sbjct: 772 EVPSQVPVDLPRRSDRERRPSTRYSPSQYVLLTDGGEPESYEEAMESDQKRQWFEAMQEE 831
Query: 1886 IKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDE 1707
+ SL+ NDT++LVK P+ ++ALKN+WVYRVK +E TS PRFKARLVVKGFSQKKGIDFDE
Sbjct: 832 MNSLYVNDTFELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKARLVVKGFSQKKGIDFDE 891
Query: 1706 IFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYV 1527
IFSPVVK SSIRVVLGLAA LD+EIEQMDVKTAFLHG+LD EIYM+QPEGF+VKGKE+YV
Sbjct: 892 IFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIYMEQPEGFKVKGKEDYV 951
Query: 1526 CKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDML 1347
C+LKKSLYGLKQAPR WY+KF SVM + GY+KT+SDHCVFV ++SDDDF+ILLLYVDDML
Sbjct: 952 CRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNRYSDDDFVILLLYVDDML 1011
Query: 1346 IVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERF 1167
IVGRN SRI LK++LSKSF+MKD+GPAKQILG+KI RDR NK+L++SQE+YI KVLERF
Sbjct: 1012 IVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERF 1071
Query: 1166 NMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAV 987
+M +AK VS+PL HFKL Q PS+++EKE+M R+PY+SAVGSLMYAMVCTRPDIA+AV
Sbjct: 1072 HMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRPDIAHAV 1131
Query: 986 GVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKST 807
GVVSR+LSNPG+EHW+AVKWILRYLRGTSSL L FG GKP+L GYTDSDMA D+DTRKST
Sbjct: 1132 GVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTGYTDSDMAGDIDTRKST 1191
Query: 806 SGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVV 627
SGYLIT+AGGAVSWQSRLQKCV LS A KE+LWMKKF++ELGF Q+
Sbjct: 1192 SGYLITYAGGAVSWQSRLQKCVDLSTTEAEFIASVEASKEMLWMKKFLQELGFVQD---- 1247
Query: 626 FCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPR 447
RSKHID RYHW+RD++ K+LEL+KIHTDDNG+DMMTKALPR
Sbjct: 1248 ------------------RSKHIDTRYHWIRDILECKMLELEKIHTDDNGSDMMTKALPR 1289
Query: 446 EKLD 435
K +
Sbjct: 1290 GKFE 1293
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 1543 bits (3994), Expect = 0.0
Identities = 785/1228 (63%), Positives = 921/1228 (75%), Gaps = 19/1228 (1%)
Frame = -3
Query: 3998 QLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMRRKS 3819
QLAGMNIKF++EVQGLW+LGTLPDSWETFRTSL NS PDG++ MDL K VLNEEMRRKS
Sbjct: 34 QLAGMNIKFEEEVQGLWLLGTLPDSWETFRTSLFNSTPDGIMNMDLVKSCVLNEEMRRKS 93
Query: 3818 QGSFTQSDVLVTEKRGRSKSRGPKGKDRGRSKSNRYANAECYHCGIKGHIKKHCRKWXXX 3639
QGS +QS VLV EKRGRSKSRGPK +DR ++K+N++AN EC++C +KGHIKK+CR+
Sbjct: 94 QGSSSQSSVLVIEKRGRSKSRGPKNRDRSKNKTNKFANVECHYCHLKGHIKKYCRQLKRD 153
Query: 3638 XXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSGASIHATSQKY 3459
D+V+T T DF I ++ DV
Sbjct: 154 MKQGKVKEKKNDNGGEDDQVATTTSDFFIVYDSDVD------------------------ 189
Query: 3458 LFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRLNLISVGKL 3279
F SYTSGDFG+VRMG++ AKA+GM +V LETSNGT+L LKNVKH+PD+R+NLIS GKL
Sbjct: 190 FFTSYTSGDFGSVRMGNDDSAKAIGMRNVRLETSNGTMLTLKNVKHIPDIRMNLISTGKL 249
Query: 3278 DDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNKIELWHSRL 3099
DDEGF ++F + QWKLTRGS+V+A+G+K SSLYLMQ + D SINA++D + ELWH+RL
Sbjct: 250 DDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSLYLMQTRVIDSSINAVDDDSTFELWHNRL 309
Query: 3098 SHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGILDLVYSDV 2919
H+SEKGL ILAK+NL+ +K +L++C HCLAGKQTRVAF+T +R PG+LDLVYSDV
Sbjct: 310 GHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRYTRKPGMLDLVYSDV 369
Query: 2918 CGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQTGKKLKCIR 2739
CGPMKTKTLGG+LYFVTFIDDHSRK WVYTLKTKDQV DVFKQFHALVERQ+G+KLKCIR
Sbjct: 370 CGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIR 429
Query: 2738 TDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSEAGLPRSF 2559
TDNGGEY FDEYCRQ GIRHQKT PKTPQLNGLAERMNRTLVERVRCLLS++ LPRSF
Sbjct: 430 TDNGGEYSSPFDEYCRQHGIRHQKTSPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSF 489
Query: 2558 WGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPKDERSKLDG 2379
WGEAL+TVVHVLNLTPCVPL+FDVPDR+WS +ISY+HLRVFGCK FVHIPKDERSKLD
Sbjct: 490 WGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDERSKLDA 549
Query: 2378 KTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKAD-KTTKSNDDLVD 2202
KTR CVF+GYGQDE GYRFYDPV+KKL+RSRD VF+ED TI+DIEK + ++ + DL+D
Sbjct: 550 KTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSGDLID 609
Query: 2201 LDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPADDQT---VEV----- 2046
LD P ++P QV+D+A ++Q D+ D++ PTQVE++ D+ D +T VEV
Sbjct: 610 LDPAPLTNLPTQVEDEAHDDQHDMGDVETPTQVEDEAHDDQHDMGDVETPTQVEVDDDVH 669
Query: 2045 ----------EAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAM 1896
+ P+ RY +Y LL DGGEPE+Y EA+ED +K +W+DAM
Sbjct: 670 EQSPAAEAPSDIPLRRSTRDRHPSTRYSVDDYVLLIDGGEPESYVEAMEDENKMKWVDAM 729
Query: 1895 KDEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGID 1716
+DE++SLHEN +++LVKLP+GKRALKN+WVYRVKQ+EHTS+PR+KARLVVKGF+QKKGID
Sbjct: 730 QDEMESLHENHSFELVKLPKGKRALKNRWVYRVKQEEHTSQPRYKARLVVKGFNQKKGID 789
Query: 1715 FDEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKE 1536
FDEIF PVVKMSSIRVVLGLAASLDLEI+QMDVKTAFLHG LD+EIYM+QPEGF +KGKE
Sbjct: 790 FDEIFFPVVKMSSIRVVLGLAASLDLEIQQMDVKTAFLHGNLDKEIYMEQPEGFVLKGKE 849
Query: 1535 NYVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVD 1356
+YVCKLKKSLYGLKQAPR W
Sbjct: 850 DYVCKLKKSLYGLKQAPRQW---------------------------------------- 869
Query: 1355 DMLIVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVL 1176
N SRID LKKQLSKSFAMKDLGP K+ILGI+I RDR +K+L M QEQYI VL
Sbjct: 870 -------NVSRIDNLKKQLSKSFAMKDLGPVKRILGIRIERDRASKKLCMLQEQYIENVL 922
Query: 1175 ERFNMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIA 996
RFNM KAKVVSSPLA+HFKL + SPSTD+EKEDM R+PYASAVGSLMYAMVCTRPDIA
Sbjct: 923 ARFNMSKAKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLMYAMVCTRPDIA 982
Query: 995 YAVGVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTR 816
YA+GVVSR+LSNPG+ HW AVKWI+RYLRGTS L+LTFG GKP+LVGYTDSDMA DVD R
Sbjct: 983 YAIGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNR 1042
Query: 815 KSTSGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQER 636
+ TSGYL+TF+GGAVSWQSRLQKCVALS ACKELLW K FM+ELGF Q+R
Sbjct: 1043 RXTSGYLMTFSGGAVSWQSRLQKCVALSTTEAKYIATAEACKELLWXKCFMQELGFKQQR 1102
Query: 635 YVVFCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKA 456
Y V+CDNQSAIHL ++NG DM+TK
Sbjct: 1103 YXVYCDNQSAIHL------------------------------------NNNGXDMLTKT 1126
Query: 455 LPREKLDVCRLIAGMVNPST*SERGRFV 372
LPREKL VC IAGM++ + R RFV
Sbjct: 1127 LPREKLGVCCSIAGMISS---NGRSRFV 1151
>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 1513 bits (3916), Expect = 0.0
Identities = 750/1339 (56%), Positives = 977/1339 (72%), Gaps = 12/1339 (0%)
Frame = -3
Query: 4382 METNTSR---MVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQV 4212
ME N + M L +NY WK MED LY KD + P+ K + K+DA+W++L+R+
Sbjct: 1 MEDNVAHDGDMFKLTANNYSYWKPMMEDHLYCKDLHEPIIYKEKVEGKSDAQWELLNRKA 60
Query: 4211 CGYIRQWVDDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMT 4032
IR+++D ++ H+S T+A LW KLE + +KT NK L+++++ L+YKDG M
Sbjct: 61 VAMIRKYIDKSLFEHVSTYTNAYELWAKLESMIQKKTPRNKANLVRRLVKLEYKDGHSMI 120
Query: 4031 DHLNAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKG 3852
+HLN F+G++NQL + +K DDE+Q L +L +LP+SW+T +LSNSAP+G +TMD
Sbjct: 121 EHLNNFKGLVNQLTKIEMKIDDELQALLLLSSLPESWDTLVVTLSNSAPEGKLTMDAVSD 180
Query: 3851 SVLNEEMRRKSQGSFTQSDVLVTEKRGRSKSRG-PKGKD----RGRSKSNRYANAECYHC 3687
S+L EE RR +G + + E RG++++RG K +D RGRSKS + CY+C
Sbjct: 181 SLLGEESRRMERGESIHPEANIIENRGKNETRGRSKSRDQYQSRGRSKSR--SKITCYYC 238
Query: 3686 GIKGHIKKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEAS 3507
G GH K CR + R I E +++N+A +++S
Sbjct: 239 GRMGHRKMECRSFK--------------------RDQKAEDMLYIIREGNILNIAYDDSS 278
Query: 3506 WVVDSGASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNV 3327
W+VDSGAS H T F+SY SGDFG V+MG+ +K VG+GD+ L TS G L+LK+V
Sbjct: 279 WIVDSGASFHVTPHGSFFSSYQSGDFGTVQMGNQDRSKIVGIGDIILTTSTGCRLVLKDV 338
Query: 3326 KHVPDLRLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSI 3147
+HVP +RLNLIS GKLDD G + F G+WKLT+GSLV+ARG K SLY+MQAK +
Sbjct: 339 RHVPAMRLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVMARGKKEGSLYVMQAKLCKGEV 398
Query: 3146 NAMNDGNKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTS 2967
N D IE+WH RL HISEKGL ILA++ L+ ++K ++L+ C HCLAGKQ RVAF+ S
Sbjct: 399 NITTDD--IEVWHKRLGHISEKGLHILARKQLLSNVKGKSLDPCAHCLAGKQHRVAFQRS 456
Query: 2966 SPS-RMPGILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQ 2790
SP R ILDLV++DVC M K++GGALYFVTFIDDHSRK W++ LK+KDQV D FK+
Sbjct: 457 SPPVRRKNILDLVHTDVCS-MSEKSIGGALYFVTFIDDHSRKVWLHLLKSKDQVLDAFKE 515
Query: 2789 FHALVERQTGKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTL 2610
FHALVER+TG+K+KC+R+DNGGEY G F+ YC++ GIR +KTPPKTPQLNGLAERMNRT+
Sbjct: 516 FHALVERETGRKIKCVRSDNGGEYRGPFETYCKKHGIRLEKTPPKTPQLNGLAERMNRTI 575
Query: 2609 VERVRCLLSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFG 2430
ERVRC+LS A LP+ FWGEA+ VV ++NLTP VPL +PD VW+GK SYNHL+VFG
Sbjct: 576 EERVRCVLSHAKLPKLFWGEAIMAVVDIVNLTPSVPLGGAIPDEVWTGKRASYNHLKVFG 635
Query: 2429 CKTFVHIPKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRD 2250
C+ FVHIPKDER+KLD KT++C++L +DEFGYR +DP+ KK++RSRD VF EDQTI D
Sbjct: 636 CRAFVHIPKDERAKLDAKTKECIYLRSPKDEFGYRLWDPINKKVVRSRDVVFFEDQTIED 695
Query: 2249 IEKADKTTKSNDDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPP 2070
I+ ++K ++TP QH + ++ Q+N P+ D+ +E+ N + P
Sbjct: 696 IKNSEKPRLRKST----ELTPVQH---ENNETHQDNDPEEDE----PVLEQSNQETHDEP 744
Query: 2069 A--DDQTVEVEAPIXXXXXXXXXXXR-YPASEYALLTDGGEPETYEEAIEDAHKNEWLDA 1899
A D Q+ + AP Y EY +LTD GEP++Y+EAI+D HK EW A
Sbjct: 745 AQEDPQSSSLPAPEPRRSSRERRPSTWYNTEEYVMLTDEGEPQSYKEAIKDIHKEEWRKA 804
Query: 1898 MKDEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGI 1719
M++E++SLHEN TY+LV+LP+G+RALKNKWVYR+K +++ ++PR+KARLVVKGF Q+KGI
Sbjct: 805 MQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFGQEKGI 864
Query: 1718 DFDEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGK 1539
DF+EIFSPVVKMSSIRV+LG+AA+ DLEIEQ+DVKTAFLHG+L+ EIYM+QPEGF+V GK
Sbjct: 865 DFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFKVPGK 924
Query: 1538 ENYVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYV 1359
EN VC+L KSLYGLKQAPR WY+KFES M E ++KT SDHCVF+++++ DF+ILLLYV
Sbjct: 925 ENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDFLILLLYV 984
Query: 1358 DDMLIVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKV 1179
DDMLI G++ +I LKK LSKSFAMKDLGPAKQILG++I+RDR + L++SQE+YI KV
Sbjct: 985 DDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKV 1044
Query: 1178 LERFNMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDI 999
LE+FNM K K V++PLA HF+L + QSP+++ E E+M +IPY+S VGSLMYAM+CTRPDI
Sbjct: 1045 LEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDI 1104
Query: 998 AYAVGVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDT 819
AYAVGVVSR+L++PG EHW AVKWILRYLRGTS L FG GKP+L GYTD+D+A D+D+
Sbjct: 1105 AYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDS 1164
Query: 818 RKSTSGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQE 639
RKSTSGYL TFAGGAVSWQS+LQKCVALS ACKE+LWMK + ELG QE
Sbjct: 1165 RKSTSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVEQE 1224
Query: 638 RYVVFCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTK 459
RYVV CDNQSAI+L KNS FH+R+KHID RYHW+R+V+ +K L LDK+HTD+N +DMMTK
Sbjct: 1225 RYVVKCDNQSAIYLAKNSKFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMMTK 1284
Query: 458 ALPREKLDVCRLIAGMVNP 402
+P +K + C AG++ P
Sbjct: 1285 VIPTKKFEDCCQGAGLLLP 1303
>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 1512 bits (3914), Expect = 0.0
Identities = 749/1339 (55%), Positives = 977/1339 (72%), Gaps = 12/1339 (0%)
Frame = -3
Query: 4382 METNTSR---MVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQV 4212
ME N + M L +NY WK MED LY KD + P+ K + K+DA+W++L+R+
Sbjct: 1 MEDNVAHDGDMFKLTANNYSYWKPMMEDHLYCKDLHEPIIYKEKVEGKSDAQWELLNRKA 60
Query: 4211 CGYIRQWVDDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMT 4032
IR+++D ++ H+S T+A LW KLE + +KT NK L+++++ L+YKDG M
Sbjct: 61 VAMIRKYIDKSLFEHVSTYTNAYELWAKLESMIQKKTPRNKANLVRRLVKLEYKDGHSMI 120
Query: 4031 DHLNAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKG 3852
+HLN F+G++NQL + +K DDE+Q L +L +LP+SW+T +LSNSAP+G +TMD
Sbjct: 121 EHLNNFKGLVNQLTKIEMKIDDELQALLLLSSLPESWDTLVVTLSNSAPEGKLTMDAVSD 180
Query: 3851 SVLNEEMRRKSQGSFTQSDVLVTEKRGRSKSRG-PKGKD----RGRSKSNRYANAECYHC 3687
S+L EE RR +G + + E RG++++RG K +D RGRSKS + CY+C
Sbjct: 181 SLLGEESRRMERGESIHPEANIIENRGKNETRGRSKSRDQYQSRGRSKSR--SKITCYYC 238
Query: 3686 GIKGHIKKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEAS 3507
G GH K CR + R I E +++N+A +++S
Sbjct: 239 GRMGHRKMECRSFK--------------------RDQKAEDMLYIIREGNILNIAYDDSS 278
Query: 3506 WVVDSGASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNV 3327
W+VDSGAS H T F+SY SGDFG V+MG+ +K VG+GD+ L TS G L+LK+V
Sbjct: 279 WIVDSGASFHVTPHGSFFSSYQSGDFGTVQMGNQDRSKIVGIGDIILTTSTGCRLVLKDV 338
Query: 3326 KHVPDLRLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSI 3147
+HVP +RLNLIS GKLDD G + F G+WKLT+GSLV+ARG K SLY+MQAK +
Sbjct: 339 RHVPAMRLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVMARGKKEGSLYVMQAKLCKGEV 398
Query: 3146 NAMNDGNKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTS 2967
N D +E+WH RL HISEKGL ILA++ L+ ++K ++L+ C HCLAGKQ RVAF+ S
Sbjct: 399 NITTDD--LEVWHKRLGHISEKGLHILARKQLLSNVKGKSLDPCAHCLAGKQHRVAFQRS 456
Query: 2966 SPS-RMPGILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQ 2790
SP R ILDLV++DVC M K++GGALYFVTFIDDHSRK W++ LK+KDQV D FK+
Sbjct: 457 SPPVRRKNILDLVHTDVCS-MSEKSIGGALYFVTFIDDHSRKVWLHLLKSKDQVLDAFKE 515
Query: 2789 FHALVERQTGKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTL 2610
FHALVER+TG+K+KC+R+DNGGEY G F+ YC++ GIR +KTPPKTPQLNGLAERMNRT+
Sbjct: 516 FHALVERETGRKIKCVRSDNGGEYRGPFETYCKKHGIRLEKTPPKTPQLNGLAERMNRTI 575
Query: 2609 VERVRCLLSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFG 2430
ERVRC+LS A LP+ FWGEA+ VV ++NLTP VPL +PD VW+GK SYNHL+VFG
Sbjct: 576 EERVRCVLSHAKLPKLFWGEAIMAVVDIVNLTPSVPLGGAIPDEVWTGKRASYNHLKVFG 635
Query: 2429 CKTFVHIPKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRD 2250
C+ FVHIPKDER+KLD KT++C++L +DEFGYR +DP+ KK++RSRD VF EDQTI D
Sbjct: 636 CRAFVHIPKDERAKLDAKTKECIYLRSPKDEFGYRLWDPINKKVVRSRDVVFFEDQTIED 695
Query: 2249 IEKADKTTKSNDDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPP 2070
I+ ++K ++TP QH + ++ Q+N P+ D+ +E+ N + P
Sbjct: 696 IKNSEKPRLRKST----ELTPVQH---ENNETHQDNDPEEDE----PVLEQSNQETHDEP 744
Query: 2069 A--DDQTVEVEAPIXXXXXXXXXXXR-YPASEYALLTDGGEPETYEEAIEDAHKNEWLDA 1899
A D Q+ + AP Y EY +LTD GEP++Y+EAI+D HK EW A
Sbjct: 745 AQEDPQSSSLPAPEPRRSSRERRPSTWYNTEEYVMLTDEGEPQSYKEAIKDIHKEEWRKA 804
Query: 1898 MKDEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGI 1719
M++E++SLHEN TY+LV+LP+G+RALKNKWVYR+K +++ ++PR+KARLVVKGF Q+KGI
Sbjct: 805 MQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFGQEKGI 864
Query: 1718 DFDEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGK 1539
DF+EIFSPVVKMSSIRV+LG+AA+ DLEIEQ+DVKTAFLHG+L+ EIYM+QPEGF+V GK
Sbjct: 865 DFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFKVPGK 924
Query: 1538 ENYVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYV 1359
EN VC+L KSLYGLKQAPR WY+KFES M E ++KT SDHCVF+++++ DF+ILLLYV
Sbjct: 925 ENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDFLILLLYV 984
Query: 1358 DDMLIVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKV 1179
DDMLI G++ +I LKK LSKSFAMKDLGPAKQILG++I+RDR + L++SQE+YI KV
Sbjct: 985 DDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKV 1044
Query: 1178 LERFNMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDI 999
LE+FNM K K V++PLA HF+L + QSP+++ E E+M +IPY+S VGSLMYAM+CTRPDI
Sbjct: 1045 LEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDI 1104
Query: 998 AYAVGVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDT 819
AYAVGVVSR+L++PG EHW AVKWILRYLRGTS L FG GKP+L GYTD+D+A D+D+
Sbjct: 1105 AYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDS 1164
Query: 818 RKSTSGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQE 639
RKSTSGYL TFAGGAVSWQS+LQKCVALS ACKE+LWMK + ELG QE
Sbjct: 1165 RKSTSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVEQE 1224
Query: 638 RYVVFCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTK 459
RYVV CDNQSAI+L KNS FH+R+KHID RYHW+R+V+ +K L LDK+HTD+N +DMMTK
Sbjct: 1225 RYVVKCDNQSAIYLAKNSKFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMMTK 1284
Query: 458 ALPREKLDVCRLIAGMVNP 402
+P +K + C AG++ P
Sbjct: 1285 VIPTKKFEDCCQGAGLLLP 1303
>emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]
Length = 1144
Score = 1485 bits (3844), Expect = 0.0
Identities = 796/1349 (59%), Positives = 932/1349 (69%), Gaps = 2/1349 (0%)
Frame = -3
Query: 4382 METNTSRMVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGY 4203
ME+NTSRM+ LNGSNY +WKGKMEDLLYV+DYY PVF + KP+NKTDAEW +LHRQVCGY
Sbjct: 1 MESNTSRMITLNGSNYHVWKGKMEDLLYVQDYYLPVFASEKPENKTDAEWNLLHRQVCGY 60
Query: 4202 IRQWVDDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHL 4023
I+QWVDDNVLNH+S+E H SLW KL+QLYARK GNNKLF IK+M+SLKY+DGTPM DHL
Sbjct: 61 IKQWVDDNVLNHVSEEKHTWSLWNKLKQLYARKIGNNKLFFIKKMISLKYQDGTPMIDHL 120
Query: 4022 NAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVL 3843
N FQGIINQL GMNIKF++EVQGLW+LGTLPDSWE FRTSLSNSA G + MDL
Sbjct: 121 NTFQGIINQLVGMNIKFEEEVQGLWLLGTLPDSWERFRTSLSNSALGGTMNMDLV----- 175
Query: 3842 NEEMRRKSQGSFTQSDVLVTEKRGRSKSRGPKGKDRGRSKSNRYANAECYHCGIKGHIKK 3663
KS GS +QSDVLVTEKRGRSKSR PK +DR +S +N+++N EC++C +KG I+K
Sbjct: 176 ------KSCGSSSQSDVLVTEKRGRSKSRSPKNRDRSKSMTNKFSNVECHYCHLKGLIRK 229
Query: 3662 HCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSGAS 3483
+CR+ D+V+T T DFLI E SWV+DSGAS
Sbjct: 230 YCRQLKRYMKQGKVKDKKNDNGGEDDQVATTTLDFLI------------EISWVIDSGAS 277
Query: 3482 IHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRL 3303
IH T +K F SYTSGDFG+VRMG++G AKA+GMG+V LETSNG +LILKNVKH+PD+ +
Sbjct: 278 IHVTPRKDFFTSYTSGDFGSVRMGNDGSAKAIGMGNVRLETSNGIVLILKNVKHIPDIHM 337
Query: 3302 NLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNK 3123
NLIS+GKLDDE FC+ F + + KLTR S+V A+ + SI A+ D +
Sbjct: 338 NLISIGKLDDEXFCNTFRDXKXKLTRRSMV--------------ARVINFSIIAVGDDST 383
Query: 3122 IELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGI 2943
+EL H+RL H+SEKGL ILAK NL L+GKQTRVAF+T +R P +
Sbjct: 384 VELCHNRLRHMSEKGLMILAKNNL---------------LSGKQTRVAFKTHYHTRKPSM 428
Query: 2942 LDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQT 2763
LDLVY DVCGPMKTKT GG+LYFVTFIDDHSRK VYTLKTKDQ RQ+
Sbjct: 429 LDLVYFDVCGPMKTKTPGGSLYFVTFIDDHSRKILVYTLKTKDQ-------------RQS 475
Query: 2762 GKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLS 2583
+KLKCI+TDNGGEY GSFDEYCRQ GIRHQKTPPKTPQLNGLAERMNRTLVERVRC
Sbjct: 476 SEKLKCIQTDNGGEYFGSFDEYCRQYGIRHQKTPPKTPQLNGLAERMNRTLVERVRC--- 532
Query: 2582 EAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPK 2403
EAL+ VVHVLNLTPCVPL+FD PDR+ SG +ISY+HL VFGCK FVHI K
Sbjct: 533 ----------EALNIVVHVLNLTPCVPLEFDDPDRILSGNEISYDHLYVFGCKAFVHILK 582
Query: 2402 DERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKTT- 2226
DERSKL+ KTR CVF+GYGQDE GYRFYDPV+KKL DIEK D
Sbjct: 583 DERSKLNAKTRPCVFIGYGQDELGYRFYDPVQKKL---------------DIEKTDAIEF 627
Query: 2225 KSNDDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVE-EDNVDETMPPADDQTVE 2049
+ +D+L+DLD H+P QV+D+A ++Q D+ D++ PTQVE +D+V E P +
Sbjct: 628 QYSDNLIDLDPVSLTHLPTQVEDEAHDDQHDIGDVETPTQVEMDDDVHEQSPVS---KAP 684
Query: 2048 VEAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHE 1869
+ P+ RY +Y EA+ D +K +W+DAM+DE+KSLHE
Sbjct: 685 PDIPLRRSTRDQHHSTRYFVDDY-------------EAMRDENKMKWVDAMQDEMKSLHE 731
Query: 1868 NDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVV 1689
N +++L KLP+GKRALKN SQKKGIDFDEIFSPVV
Sbjct: 732 NHSFELAKLPKGKRALKN--------------------------SQKKGIDFDEIFSPVV 765
Query: 1688 KMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKS 1509
KMS IRVVLGLAASLDLEI+
Sbjct: 766 KMSYIRVVLGLAASLDLEID---------------------------------------- 785
Query: 1508 LYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNT 1329
LYGLKQAPR WY+KFESVMGEQGY+KTTSDHCVFVQKFSD+DF+I LLYVDD+LIVGRN
Sbjct: 786 LYGLKQAPRQWYKKFESVMGEQGYRKTTSDHCVFVQKFSDNDFVIFLLYVDDILIVGRNV 845
Query: 1328 SRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAK 1149
SRID+LKKQL KSF+MKDLGPAK+ILGI+I RDR +K+LYMSQEQYI KVLERFNM AK
Sbjct: 846 SRIDKLKKQLRKSFSMKDLGPAKKILGIRIERDRASKKLYMSQEQYIEKVLERFNMSNAK 905
Query: 1148 VVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRY 969
VVSSPLA+HFKL + +PS D+EKE M R+ YA VGSLMYAMVCTRP+IAYAVGVVS +
Sbjct: 906 VVSSPLASHFKLSSRHNPSIDKEKEHMRRVLYALTVGSLMYAMVCTRPNIAYAVGVVSHF 965
Query: 968 LSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTSGYLIT 789
LSNPG+ HW AVKWI+RYLRG S L+LTFG GKP+LVGY DSDMA DVD R+STSGYL+T
Sbjct: 966 LSNPGRLHWEAVKWIMRYLRGISKLKLTFGSGKPILVGYIDSDMAGDVDNRRSTSGYLMT 1025
Query: 788 FAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQS 609
F GG VSWQSRLQKCVALS ACKEL
Sbjct: 1026 FLGGVVSWQSRLQKCVALSTTEAEYIATTKACKELF------------------------ 1061
Query: 608 AIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVC 429
KNSTFHARSKHIDVRYHWMRD +N+ L EL+K+HTD N DM+ K+LPREKL+VC
Sbjct: 1062 -----KNSTFHARSKHIDVRYHWMRDALNNNLFELEKMHTDYNDLDMLMKSLPREKLEVC 1116
Query: 428 RLIAGMVNPST*SERGRFVGLGFLICGDV 342
I M + GR VG ++C D+
Sbjct: 1117 CSIVEM------ATSGRIVG---ILCVDL 1136
>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1314
Score = 1476 bits (3821), Expect = 0.0
Identities = 735/1328 (55%), Positives = 958/1328 (72%), Gaps = 9/1328 (0%)
Frame = -3
Query: 4361 MVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGYIRQWVDD 4182
M L N+ WK MED LY KD Y P+ + SKP+ KTD +W+IL+R+ IR+++D
Sbjct: 1 MFKLTADNFSYWKPMMEDHLYCKDLYEPITQQSKPEGKTDKDWEILNRKAVAVIRKYIDR 60
Query: 4181 NVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQGII 4002
++ H+S T+A LW KLE L +KT NK L +++ L+Y DG M +HLN F+G++
Sbjct: 61 SLFEHVSTYTNAYELWTKLESLIQKKTPRNKAHLYRRLAKLEYMDGQNMIEHLNTFKGLV 120
Query: 4001 NQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMRRK 3822
NQL I DDEVQ L + +LP+SW+T +LSNSAP+G +++D S+LNEE RR+
Sbjct: 121 NQLKKAEINIDDEVQTLMLFSSLPESWDTLIITLSNSAPEGKLSLDSVTDSLLNEESRRR 180
Query: 3821 SQGSFTQSDVLVTEKRGRSKSR--GPKGKDRGRSKSNRYANAECYHCGIKGHIKKHCR-- 3654
+G Q + V + RGRSK+R G +GK +GRSKS CY+CG GH K CR
Sbjct: 181 ERGLNNQFEANVIDNRGRSKNREKGGRGKSQGRSKSR--TRICCYYCGKPGHRKSECRFL 238
Query: 3653 KWXXXXXXXXXXXXXXXXXXXXDRVSTVTGD--FLIAHEFDVVNLACNEASWVVDSGASI 3480
K + VT D FL+ E + +N+A +E W++DSGAS
Sbjct: 239 KKDQQAGTVHPDQIDPRKKKEDGTTTAVTSDDVFLVGEE-NYLNIAFDECIWIIDSGASF 297
Query: 3479 HATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRLN 3300
H T + F+SY GDFG V+MG++ +K VG+G++ L T NG L+LK V+HVPD+RLN
Sbjct: 298 HVTPHEEFFSSYQKGDFGMVKMGNHVTSKIVGIGEIALMTENGNKLMLKEVRHVPDMRLN 357
Query: 3299 LISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNKI 3120
LISV KLD+ G + FS +WKL+RGS++VARG K SLY MQ K +N D +K
Sbjct: 358 LISVSKLDEAGMINQFSADRWKLSRGSMIVARGKKEGSLYTMQGKICKGDMNVAQDASK- 416
Query: 3119 ELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRM-PGI 2943
ELWH RL H+SEKGL+ILAK++L P+IK + LE C CLAGKQ RV+FR +R I
Sbjct: 417 ELWHRRLGHMSEKGLEILAKDHL-PNIKGQPLESCEDCLAGKQHRVSFRRPDDARRRKHI 475
Query: 2942 LDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQT 2763
LDLV+SDVC + +++GGA YFVTFIDDHSRK WVY LKTKDQV FK+FHALVER T
Sbjct: 476 LDLVHSDVCSTSE-RSIGGAQYFVTFIDDHSRKVWVYPLKTKDQVLQAFKEFHALVERAT 534
Query: 2762 GKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLS 2583
G+KLKCIRTDNGGEYLG F+ YC+ GIRH+K PPKTPQ+NG+AERMNRT+ E+VR +LS
Sbjct: 535 GRKLKCIRTDNGGEYLGPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLS 594
Query: 2582 EAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPK 2403
A +P+SFWGEA+ T ++NL+P PL+ ++P+ VWSGK Y HL+VFGC+ FVHIPK
Sbjct: 595 HAKIPKSFWGEAVLTAADLINLSPSRPLNGEIPEEVWSGKKAYYGHLKVFGCRAFVHIPK 654
Query: 2402 DERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKTTK 2223
DER+KLD K ++C++L +DE G+R +DPV KK++RSRD +F EDQTI+DI+K +K +
Sbjct: 655 DERTKLDAKVKECIYLRSPKDELGFRLWDPVNKKIVRSRDVIFFEDQTIQDIKKPEKPKQ 714
Query: 2222 SN--DDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPADDQTVE 2049
D + + ++D+ Q QP+ + + + + E P +++
Sbjct: 715 KEVQDSSPIVINNSGGEISQRIDEPNQTEQPESEQSQTMQEEQMETNQEEQEPEVRRSMR 774
Query: 2048 VEAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHE 1869
V P RY + +Y LTD GEP+++ EAIE K +WL AM++E++SL E
Sbjct: 775 VRQP----------SKRYFSDDYVNLTDEGEPQSFIEAIEMNDKEKWLQAMEEELQSLKE 824
Query: 1868 NDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVV 1689
N+TY+LV+LP+G++ALKNKWV+++K +E+ ++PR+KAR+VVKG +QKKGIDF+EIFSPVV
Sbjct: 825 NETYELVELPQGRKALKNKWVFKLKTEENNTKPRYKARIVVKGCNQKKGIDFEEIFSPVV 884
Query: 1688 KMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKS 1509
KM+SIR +LGLAA LDLEIEQ+DVKTAFLHG+L+ EIYM+QPEGF GKE+ VC+LKKS
Sbjct: 885 KMTSIRAILGLAAKLDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFAEPGKEHLVCRLKKS 944
Query: 1508 LYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNT 1329
LYGLKQAPR WY+KF+ M + ++KT++D CVFV+ + + + IILLLYVDDMLIVG++
Sbjct: 945 LYGLKQAPRQWYKKFDLFMAQHNFKKTSADQCVFVKNYENGESIILLLYVDDMLIVGKDK 1004
Query: 1328 SRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAK 1149
++I LKK LSKSFAMKDLG K+ILG+KI RDR + L+MSQE YI KVLERFNM AK
Sbjct: 1005 TKIAALKKALSKSFAMKDLGSVKKILGMKIIRDRSKRMLWMSQEDYIKKVLERFNMHNAK 1064
Query: 1148 VVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRY 969
V PL H KL Q P +EEKE+M+++PY+SAVGSLMYAMVCTRPDIAYAVGVVSR+
Sbjct: 1065 SVHVPLPGHLKLSKKQCP-VNEEKEEMSKVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRF 1123
Query: 968 LSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTSGYLIT 789
LSNPGKEHWNAVKWILRYL+GT+ L FG G +L GY+D+DMA DVD+RKSTSGYLIT
Sbjct: 1124 LSNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAGDVDSRKSTSGYLIT 1183
Query: 788 FAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQS 609
FAGGA+SWQSRLQKC+ALS CKE+LWMKKF++ELG +QE YV++CD+QS
Sbjct: 1184 FAGGAISWQSRLQKCIALSTTEAEFIAITEGCKEILWMKKFLQELGQDQESYVLYCDSQS 1243
Query: 608 AIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVC 429
AIHL KNSTFH+RSKHIDVRYHW+RDV+ K+L+++KIHT DNGADMMTK+LPREK++VC
Sbjct: 1244 AIHLSKNSTFHSRSKHIDVRYHWIRDVLESKMLKIEKIHTKDNGADMMTKSLPREKIEVC 1303
Query: 428 RLIAGMVN 405
+ +AG+ +
Sbjct: 1304 KEVAGLAS 1311
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 1463 bits (3787), Expect = 0.0
Identities = 761/1247 (61%), Positives = 893/1247 (71%), Gaps = 4/1247 (0%)
Frame = -3
Query: 4070 MMSLKYKDGTPMTDHLNAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNS 3891
MMSLKY+D TPMTDHLN FQGIINQLAG+NIKF++EVQGLW+LGTLPDSWETFRTSLSNS
Sbjct: 1 MMSLKYQDVTPMTDHLNTFQGIINQLAGINIKFEEEVQGLWLLGTLPDSWETFRTSLSNS 60
Query: 3890 APDGVITMDLAKGSVLNEEMRRKSQGSFTQSDVLVTEKRGRSKSRGPKGKDRGRSKSNRY 3711
PD VTEKRG SKSRGPK +DR +SK+N+
Sbjct: 61 XPD-------------------------------VTEKRGXSKSRGPKNRDRSKSKTNKX 89
Query: 3710 ANAECYHCGIKGHIKKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVV 3531
AN EC++C +KGHIKK+CR+ D+V+T T DFLI ++ DVV
Sbjct: 90 ANVECHYCHLKGHIKKYCRQLKRDMKQGKVKEKKNDNGGEDDQVATTTSDFLIVYDSDVV 149
Query: 3530 NLACNEASWVVDSGASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNG 3351
N AC E SWV+DSGASIHAT +K F SYTSGDFG+VRMG++G AKA+GMGDV LETSNG
Sbjct: 150 NFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDVRLETSNG 209
Query: 3350 TLLILKNVKHVPDLRLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQ 3171
T+L LKNVKH+PD+R+NLIS GKLDDEGF + F + QWKLTRGS+ +A+G+K SSLYLMQ
Sbjct: 210 TMLTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXIAKGNKSSSLYLMQ 269
Query: 3170 AKQFDRSINAMNDGNKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQ 2991
A+ D SINA++D + ELWH+RL H+SEKGL ILAK+NL+ +K +L++C HCLAGK
Sbjct: 270 ARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSXMKKGSLKRCAHCLAGKX 329
Query: 2990 TRVAFRTSSPSRMPGILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQ 2811
TRVAF+T +R PG+LDLVY DVCGPMKTKTL G+LYFVTFIDDHSRK WVYTLK KDQ
Sbjct: 330 TRVAFKTLHHTRKPGMLDLVYFDVCGPMKTKTLXGSLYFVTFIDDHSRKIWVYTLKXKDQ 389
Query: 2810 VFDVFKQFHALVERQTGKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLA 2631
V DVFKQFHALVERQ+G+KLKCIRTDNGGEY G FDEYCRQ GIRHQKTPPKTPQLNGLA
Sbjct: 390 VLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGIRHQKTPPKTPQLNGLA 449
Query: 2630 ERMNRTLVERVRCLLSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISY 2451
ERMNRTLVERVRCLLS++ LPRSFWGEAL+TVVHVLNLTPCVPL+FDVPDR+WS +ISY
Sbjct: 450 ERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISY 509
Query: 2450 NHLRVFGCKTFVHIPKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFV 2271
+HLRVFGCK FVHIPKDERSKLD KTR CVF+GYGQDE GYRFYD V+KKL V
Sbjct: 510 DHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDELGYRFYDSVQKKL--------V 561
Query: 2270 EDQTIRDIEKADKTTKSNDDLVDL-DVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVE-E 2097
ED+ ++DD D+ DV P QV+D+A ++Q D+ D++ PTQVE +
Sbjct: 562 EDE-------------AHDDQHDMGDV----ETPTQVEDEAHDDQHDMGDVETPTQVEVD 604
Query: 2096 DNVDETMPPADDQTVEVEA--PIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDA 1923
D+V E P TVE + P+ RY +Y LLTDGGEPE+Y EA+ED
Sbjct: 605 DDVHEQSP-----TVEAPSNIPLRKSTRDRHPSTRYSVDDYVLLTDGGEPESYVEAMEDE 659
Query: 1922 HKNEWLDAMKDEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVK 1743
+K +W+DAM+DE++SLHEN +++LV KWVY+VKQ+EHTS+PR+KARLVVK
Sbjct: 660 NKMKWVDAMQDEMESLHENHSFELV-----------KWVYKVKQEEHTSQPRYKARLVVK 708
Query: 1742 GFSQKKGIDFDEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQP 1563
GF+QKK +SLDLEI++MDVKTAFLHG+LD EIYM+Q
Sbjct: 709 GFNQKK------------------------SSLDLEIQRMDVKTAFLHGDLDXEIYMEQL 744
Query: 1562 EGFRVKGKENYVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDD 1383
EGF +KGKE+Y KFSDDD
Sbjct: 745 EGFVLKGKEDY-------------------------------------------KFSDDD 761
Query: 1382 FIILLLYVDDMLIVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMS 1203
F+ILLLYVDD+LIV RN SRID LKKQLSKSFAMKDLGPAK+ILGIKI RDR +K+L M
Sbjct: 762 FVILLLYVDDILIVXRNVSRIDNLKKQLSKSFAMKDLGPAKRILGIKIERDRASKKLCML 821
Query: 1202 QEQYIVKVLERFNMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYA 1023
QEQYI KVL RFNM KAKVVSSPLA+HFKL + SPS D+EKEDM R+PYAS VGSLMYA
Sbjct: 822 QEQYIEKVLARFNMSKAKVVSSPLASHFKLSSRHSPSIDKEKEDMRRVPYASTVGSLMYA 881
Query: 1022 MVCTRPDIAYAVGVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDS 843
M VKWI+RYLRGTS L+LTF GKP+LVGY DS
Sbjct: 882 M--------------------------EVVKWIMRYLRGTSKLKLTFRGGKPILVGYIDS 915
Query: 842 DMAADVDTRKSTSGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFM 663
DMA DVD R+STS YL+TF+GG VSWQSRL+KCVALS ACKELLWMK FM
Sbjct: 916 DMAGDVDNRRSTSDYLMTFSGGVVSWQSRLKKCVALSTIEAKYIAAAEACKELLWMKCFM 975
Query: 662 EELGFNQERYVVFCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDD 483
+ELGF Q+RYVV+CDNQSAIHL KNST+ ARSKHIDVRYHWMRD +ND E++KIHTD+
Sbjct: 976 QELGFKQQRYVVYCDNQSAIHLSKNSTYQARSKHIDVRYHWMRDALNDNFFEIEKIHTDN 1035
Query: 482 NGADMMTKALPREKLDVCRLIAGMVNPST*SERGRFVGLGFLICGDV 342
NG+DM+TK LP EKL VC IAGM++ + G + +CG +
Sbjct: 1036 NGSDMLTKTLPMEKLGVCCFIAGMISSN---------GRSYFVCGPI 1073
>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 1405 bits (3636), Expect = 0.0
Identities = 697/1337 (52%), Positives = 937/1337 (70%), Gaps = 13/1337 (0%)
Frame = -3
Query: 4382 METNTSRMVNLNGSNYQIWKGKMEDLLYVKDYYAPVF-ETSKPDNKTDAEWKILHRQVCG 4206
ME+N MV L +NY +WK MED L + D Y P+ + SKP+ +D +WK L ++
Sbjct: 1 MESNIGTMVKLTATNYSLWKSMMEDRLNLLDLYDPIEGDGSKPEKMSDGDWKKLKKKTLS 60
Query: 4205 YIRQWVDDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDH 4026
IRQWVD + N +S ET + LW+KLE +Y K +K+F+++++M+LK ++G + +H
Sbjct: 61 TIRQWVDITLYNQVSKETDPQVLWKKLESMYETKNAQSKIFMMRKLMNLKLQEGRAVAEH 120
Query: 4025 LNAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSV 3846
LN F+G++ QL + +DE+Q L +LG+LPDSW+T SLSNSAP+G +++++ + S+
Sbjct: 121 LNDFEGLVMQLISAGLTLEDEMQALLLLGSLPDSWDTLVVSLSNSAPEGKVSLNMVRNSI 180
Query: 3845 LNEEMRRKSQGSFTQSDVLVTEKRGRSKSRGPKG-KDRGRSKSNRYANAECYHCGIKGHI 3669
LNEE+RR+ ++ LVTE+R RSKSR P+G +D +S+ R CY+CG GH+
Sbjct: 181 LNEEIRRRDVAK-NETHALVTERRSRSKSRTPRGHRDHSKSRERR----SCYNCGKPGHL 235
Query: 3668 KKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSG 3489
KK+CR +T L+ ++ + ++A + W++DS
Sbjct: 236 KKNCRFLKKEIQDKNQANDRNTAATTSASDDEIT---LLCNQGECCHIAEPDEEWIIDSA 292
Query: 3488 ASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDL 3309
AS H ++ F +Y GDFG+V MG+ ++ VG+GD+HL+T G LILK+V+H+PD+
Sbjct: 293 ASYHCVPKREYFTTYRKGDFGHVNMGNKSTSQIVGIGDIHLQTGVGCTLILKDVRHIPDI 352
Query: 3308 RLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDG 3129
RLNLISV LD EG+ G+WKLT+GSLVVA+G +LY K +NA+ +
Sbjct: 353 RLNLISVNVLDKEGYEHSMKGGRWKLTKGSLVVAKGKLCCTLYKTYVKVCKGQLNAVEND 412
Query: 3128 NKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMP 2949
LWH RL+HISEKGL++LAK++LIP K + L C +C+ GK RV+F+ SS +R
Sbjct: 413 ASPNLWHRRLAHISEKGLQLLAKQSLIPQAKGDFLNPCDYCVFGKHHRVSFKKSS-NRKK 471
Query: 2948 GILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVER 2769
L+LV+SDVCGPM+ ++LGG YFVTFIDD SRK+WVY L+ K QVF F+QFHA+VER
Sbjct: 472 NKLELVHSDVCGPMEVESLGGNKYFVTFIDDASRKTWVYLLQAKSQVFQCFQQFHAMVER 531
Query: 2768 QTGKKLKCIRTDNGGEYLGS-FDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRC 2592
+TGK+LKCIRTDNGGEY+ F +YC + GIRH+KT P TPQ NG+AERMNRT+VE+VRC
Sbjct: 532 ETGKQLKCIRTDNGGEYISKEFKDYCSKYGIRHEKTVPGTPQHNGIAERMNRTIVEKVRC 591
Query: 2591 LLSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVH 2412
+L A LP+ FWGEA+ T V+++N P VPL FD+P+RVW+GK++SY+HL+VFGCK F+H
Sbjct: 592 MLRMAKLPKPFWGEAVQTAVYLINRLPSVPLGFDIPERVWAGKEVSYSHLKVFGCKAFMH 651
Query: 2411 IPKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADK 2232
+PK++RSKLD K CVF+GYG +EFGY+ +DP K+++RSRD +F E +TI D+ K +
Sbjct: 652 VPKEQRSKLDDKAIPCVFVGYGNEEFGYKLWDPERKRIVRSRDVIFHEHETIEDL-KGGE 710
Query: 2231 TTKSNDDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPADDQTV 2052
K +D V P HVP + D + Q + + P +E++VDE + D +
Sbjct: 711 AAKPMED----GVNPTSHVPSECATDGRQTQEPEHETEEPVFGDEESVDEEVVVPDTEAN 766
Query: 2051 E----------VEAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLD 1902
E VE I +YP+SEY L+ D GEPE+++E K W+
Sbjct: 767 EQGEPSYTSGQVEPQIRRSTRERQPSTKYPSSEYILIADEGEPESFQEVQSHKDKGCWVK 826
Query: 1901 AMKDEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKG 1722
AM++E+ SL N+TY+LV+LP+G+R LKNKWV+++K+D R KARLVVKGFSQK+G
Sbjct: 827 AMQEEMDSLKRNNTYELVQLPKGRRVLKNKWVFKLKKDGD-KLVRHKARLVVKGFSQKQG 885
Query: 1721 IDFDEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKG 1542
IDF+EIFSPVVKM SIRV+LGL AS+DLE+EQ+DVKTAFLHG+LD EIYM+QPEGF VKG
Sbjct: 886 IDFEEIFSPVVKMCSIRVILGLVASMDLELEQLDVKTAFLHGDLDEEIYMEQPEGFEVKG 945
Query: 1541 KENYVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLY 1362
KE+ VCKLKKSLYGLKQAPR WY+KF+S + QG+++T +D CV++ ++ + F+ILLLY
Sbjct: 946 KEDMVCKLKKSLYGLKQAPRQWYKKFDSFIKSQGFKRTDADPCVYINRYPNGKFLILLLY 1005
Query: 1361 VDDMLIVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVK 1182
VDDMLIVG++ I LK +LSK+F MKD+G AK ILG+ I RDR +L++SQE+YI +
Sbjct: 1006 VDDMLIVGQDVQMIKNLKVELSKAFDMKDMGAAKHILGMDIIRDRKAGKLWLSQERYIER 1065
Query: 1181 VLERFNMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPD 1002
VLERFNM AK V +PL HFKL P+ +E M+ IPY+SAVGSLMYAMVCTRPD
Sbjct: 1066 VLERFNMKNAKPVITPLVGHFKLSKKSCPTI---REKMSTIPYSSAVGSLMYAMVCTRPD 1122
Query: 1001 IAYAVGVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVD 822
IA+AVGVVSRYLSNPGK HW AVKWILRYLRGTS L L FG KP+L GYTD+DMA D+D
Sbjct: 1123 IAHAVGVVSRYLSNPGKTHWEAVKWILRYLRGTSKLCLRFGGAKPILEGYTDADMAGDLD 1182
Query: 821 TRKSTSGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQ 642
RKSTSGY+ TF+GGA+SWQS+LQKC++LS A KE+LWMKKF++ELG Q
Sbjct: 1183 DRKSTSGYIFTFSGGAISWQSKLQKCISLSTTEAEYVAATEAGKEMLWMKKFLQELGLKQ 1242
Query: 641 ERYVVFCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMT 462
E Y+V+CD+QSA+ L KN+ +H+R+KHIDVRYHW+R I +L +L KIHTD N ADM+T
Sbjct: 1243 EEYIVYCDSQSALDLSKNTMYHSRTKHIDVRYHWIRLAIEKQLFQLKKIHTDRNAADMLT 1302
Query: 461 KALPREKLDVCRLIAGM 411
K + REKL C + GM
Sbjct: 1303 KNVTREKLRQCIELVGM 1319
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 1384 bits (3583), Expect = 0.0
Identities = 714/1247 (57%), Positives = 889/1247 (71%), Gaps = 13/1247 (1%)
Frame = -3
Query: 4115 YARKTGNNKLFLIKQMMSL------KYKDGTPMTDHLNAFQGIINQLAGMNIKFDDEVQG 3954
Y +TG K L + + L K KD T QG +QL+ M IKFDDEV G
Sbjct: 104 YRPRTGKMKDLLFVKKLHLPVFATEKPKDKTDEEWKFEHQQGFRDQLSQMGIKFDDEVLG 163
Query: 3953 LWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMRRKSQGSFTQSDVLVTEKR 3774
LW+L TLPDSWETFR S++NS+PDGV++++ K SVLNEEMRRK+ G+ + S+VL TE R
Sbjct: 164 LWLLNTLPDSWETFRVSITNSSPDGVVSLENVKSSVLNEEMRRKAHGTSSHSEVLFTENR 223
Query: 3773 GRSKSRGPKG-KDRGRSKS-NRYANAECYHCGIKGHIKKHCRKWXXXXXXXXXXXXXXXX 3600
GRS+ + KG K RSKS +RY N EC++C GHI+++C W
Sbjct: 224 GRSQKKELKGSKQNSRSKSKSRYKNVECHYCHKTGHIQRNCFLW-KKENKDKKGKQKEKH 282
Query: 3599 XXXXDRVSTVTG--DFLIAHEFDVVNLACNEASWVVDSGASIHATSQKYLFASYTSGDFG 3426
DRV+T D +I + D VNL +E+ W++DSG ++H
Sbjct: 283 HDNDDRVTTAISDDDLIILRDHDSVNLVSDESMWIIDSGVTLH----------------- 325
Query: 3425 NVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRLNLISVGKLDDEGFCSMFSN 3246
+G+ DV L+T+ G L+L+ VKH PD+R NL+SV LDD GF + F
Sbjct: 326 -----------VIGIADVCLQTNMGMQLLLRGVKHAPDVRFNLLSVQMLDDSGFENHFGL 374
Query: 3245 GQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNKIELWHSRLSHISEKGLKIL 3066
G+WKL+RG+L+VA+G + S LY +A S+NAM+ LWH RLSHISEKGL L
Sbjct: 375 GKWKLSRGNLIVAKGDRISKLYWTKALVAKDSVNAMD--MDASLWHRRLSHISEKGLNCL 432
Query: 3065 AKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGILDLVYSDVCGPMKTKTLGG 2886
AK++++ +KN LEKC HC+AGKQTRV+F+ PS+ +L+LV+SDVCGP+K K+ G
Sbjct: 433 AKKDVLSGLKNAELEKCSHCMAGKQTRVSFKKHPPSKKSELLELVHSDVCGPLKVKSFTG 492
Query: 2885 ALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQTGKKLKCIRTDNGGEYLGSF 2706
+YFVTFIDD SRK WVY LKTKDQV FK+FH LVERQ+GKKLKCIRTDNGGEY G F
Sbjct: 493 TIYFVTFIDDCSRKLWVYALKTKDQVLAKFKEFHVLVERQSGKKLKCIRTDNGGEYCGPF 552
Query: 2705 DEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSEAGLPRSFWGEALSTVVHV 2526
D YC+Q GIRH+KTPPKTPQLNGLAERMNRTL+ERVRC+LS+A LP+ FWGEAL T VHV
Sbjct: 553 DAYCKQHGIRHEKTPPKTPQLNGLAERMNRTLIERVRCMLSKAKLPKHFWGEALYTAVHV 612
Query: 2525 LNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPKDERSKLDGKTRQCVFLGYG 2346
+NL+P + L+ +VPD+VW GK++ Y+HLRVFGCK +VH
Sbjct: 613 INLSPAIALNAEVPDKVWFGKNVKYDHLRVFGCKAYVH---------------------- 650
Query: 2345 QDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKTTKSNDDL---VDLDVTPPQHV 2175
KK +RSRD F+EDQTI DI+K +K T D+ VD ++ QH
Sbjct: 651 -------------KKAVRSRDVKFMEDQTIEDIDKTEKITSETDNRLSNVDPVLSDEQH- 696
Query: 2174 PVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPADDQTVEVEAPIXXXXXXXXXXXRY 1995
DD + Q D D P +++ + M +D E P RY
Sbjct: 697 -----DDVDDQQLG-DAFDVP--IDDSEEEHGMSQDEDLGDAPEPP-------QVQIRRY 741
Query: 1994 PASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHENDTYDLVKLPEGKRALKN 1815
P+ +Y LTD GEPE Y EA+E K +WLDAM+DE+KSLH+N T+DLVKLP+ K+AL+N
Sbjct: 742 PSDDYVTLTDEGEPECYLEAMESEEKKKWLDAMQDEMKSLHDNHTFDLVKLPKDKKALEN 801
Query: 1814 KWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVVKMSSIRVVLGLAASLDLE 1635
+W+YRVKQ+ +++ PR+KARLVVKGF Q+KGIDF+EIFSPVVKMSSIR+VL LAA+LDLE
Sbjct: 802 RWIYRVKQESNSTSPRYKARLVVKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLE 861
Query: 1634 IEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKSLYGLKQAPRLWYQKFESV 1455
+EQMDVKTAFLHG+L+ EIYM QP+GF V+GKE++VC+L+KSLYGLKQAPR WY+KFESV
Sbjct: 862 VEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESV 921
Query: 1454 MGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNTSRIDRLKKQLSKSFAMKD 1275
M EQGY+KTTSDHCVFV+KF++DDFIILLLYVDD+LIVG++ S I+RLKKQLS+SFAMKD
Sbjct: 922 MCEQGYKKTTSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKD 981
Query: 1274 LGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAKVVSSPLATHFKLGAHQSP 1095
+G AKQILGI+I RDR K+L++SQE Y+ +VL+RF M AKVVS+PLATHFKL QSP
Sbjct: 982 MGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSP 1041
Query: 1094 STDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPGKEHWNAVKWILRY 915
S + EK DM RIPYASAVGSLMYAMVCTRPDIA+ VG VSR++SNPG+EHWNAVKWILRY
Sbjct: 1042 SYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRY 1101
Query: 914 LRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTSGYLITFAGGAVSWQSRLQKCVAL 735
LRGT+ LRL FG KP LVGYTDSDM D+D+R+STSGY+I FAGGAV+WQSRLQKCVAL
Sbjct: 1102 LRGTTCLRLCFGGDKPTLVGYTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVAL 1161
Query: 734 SXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQSAIHLGKNSTFHARSKHID 555
S ACKELLW+KK ++EL F Q++Y++FCD+QSAI+LGKNSTFH+RSKHID
Sbjct: 1162 STTEAEFIAITEACKELLWVKKLLQELSFVQDKYLLFCDSQSAIYLGKNSTFHSRSKHID 1221
Query: 554 VRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVCRLIAG 414
VRYHW+RD + +LLEL K+HTDDN ADMMTK+LPR K + C IAG
Sbjct: 1222 VRYHWIRDALEARLLELAKVHTDDNCADMMTKSLPRSKSETCCKIAG 1268
>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
Length = 1183
Score = 1365 bits (3532), Expect = 0.0
Identities = 732/1330 (55%), Positives = 896/1330 (67%), Gaps = 1/1330 (0%)
Frame = -3
Query: 4382 METNTSRMVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGY 4203
ME+NTSRM+ +NGSNY +WKGKMEDLLY KDYY VF + KP+NKTDA+W +LHR VCGY
Sbjct: 1 MESNTSRMITVNGSNYHVWKGKMEDLLYAKDYYLLVFASEKPENKTDAKWDLLHRHVCGY 60
Query: 4202 IRQWVDDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHL 4023
IRQWVD+NVLNH+S+E HARSLW KLEQLYARKTGNNKLFLIK+M+SLKY+D T MTDHL
Sbjct: 61 IRQWVDNNVLNHVSEEKHARSLWNKLEQLYARKTGNNKLFLIKKMISLKYQDETTMTDHL 120
Query: 4022 NAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVL 3843
N FQGIINQL MNIKF++E+QGLW+LGTL DSWETFRTSLSNSAPDG + MDL K VL
Sbjct: 121 NTFQGIINQLVRMNIKFEEEMQGLWLLGTLSDSWETFRTSLSNSAPDGTMNMDLVKSCVL 180
Query: 3842 NEEMRRKSQGSFTQSDVLVTEKRGRSKSRGPKGKDRGRSKSNRYANAECYHCGIKGHIKK 3663
NEEM RKSQGS +Q DVLVT+K+ RSKSRGP +DR +SK+N++AN EC++ +KGHI K
Sbjct: 181 NEEMGRKSQGSSSQLDVLVTKKKERSKSRGPNNRDRRKSKTNKFANVECHYFHLKGHIVK 240
Query: 3662 HCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSGAS 3483
+CR+ DRV+T T DFLI ++ DVVN AC E SWV+DSGA
Sbjct: 241 YCRQLKRDMKQGKVKDKKNDNGGEDDRVATTTSDFLIVYDSDVVNFACQETSWVIDSGAL 300
Query: 3482 IHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRL 3303
IHAT QK F SYT GDFG+V M + G AKA+GM V LETSNGT+LILKNVKH+PD+R
Sbjct: 301 IHATPQKDFFTSYTFGDFGSVXMDNEGSAKAIGMRYVRLETSNGTMLILKNVKHIPDIR- 359
Query: 3302 NLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNK 3123
IS GKLDDEGF + F + QWKLT GS+V +G K SSL LMQA+ D SINA++D +
Sbjct: 360 --ISTGKLDDEGFYNTFHDSQWKLTIGSMVATKGKKCSSLCLMQARVIDSSINAVDDDSI 417
Query: 3122 IELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGI 2943
+ELWH++L H+SEKGL ILAK+NL+ +K +L+ C HCL KQTRVAF+T +R PG
Sbjct: 418 VELWHNKLGHMSEKGLMILAKKNLLSGMKKGSLKMCAHCLVRKQTRVAFKTHCHTRKPGS 477
Query: 2942 LDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQT 2763
+ AL V F RK W ++ D F Q+
Sbjct: 478 QE---------------SNALNRVRF-GAEMRKIWPSEXNC-SKLRDNFAPCEIGTSTQS 520
Query: 2762 GKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLS 2583
G+KLKCI TDNGGEY G F++YCRQ GI+HQKTPPKTPQLNGL ERMNRTLVERVRCLLS
Sbjct: 521 GEKLKCICTDNGGEYFGPFNKYCRQHGIQHQKTPPKTPQLNGLVERMNRTLVERVRCLLS 580
Query: 2582 EAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPK 2403
++ LPRSFW EAL+T+VHVLNLTPCV L+FDVPD++WS +ISY+HL VFGCK FVHI K
Sbjct: 581 QSQLPRSFWSEALNTIVHVLNLTPCVHLEFDVPDKMWSDNEISYDHLXVFGCKAFVHISK 640
Query: 2402 DERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKTT- 2226
DERSKLD KTR CVF+GYGQDE GYRFYDPV+KKL+RSRDA+F+E TI+DIEK D
Sbjct: 641 DERSKLDAKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDAMFMEXHTIQDIEKTDVIEF 700
Query: 2225 KSNDDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPADDQTVEV 2046
+ +D+L+DLD P H P QV+D+A ++Q D+ D++ PTQVE +D+ + +++
Sbjct: 701 QYSDNLIDLDPVPLTHFPTQVEDEAHDDQHDISDVETPTQVE---MDDDIHEQSQRSIRD 757
Query: 2045 EAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHEN 1866
P Y +Y LLT+GGEP +YEEA+ D +K +W+DAM+DE+KSLHEN
Sbjct: 758 RHP----------STWYSVDDYVLLTNGGEPXSYEEAMXDENKMKWVDAMQDEMKSLHEN 807
Query: 1865 DTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVVK 1686
++ L+KLP+ K ALKN WVY+VKQ+EHTS+P + + Q +G E V K
Sbjct: 808 HSFXLIKLPKRKIALKNMWVYKVKQEEHTSQPHKEIYM-----EQSEGFTIKEKKDYVYK 862
Query: 1685 MSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKSL 1506
+ + + GL + Q K + GE +G+R K N+
Sbjct: 863 LK--KSLYGLKQT----PRQWYKKFKSVMGE----------QGYR-KTTSNHC------- 898
Query: 1505 YGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNTS 1326
++ QKF ++D V + + DD +LIVGRN S
Sbjct: 899 --------VFMQKF------------SNDDFVILLLYVDD-----------ILIVGRNVS 927
Query: 1325 RIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAKV 1146
RID+LKKQLSKSF+MKDLGPAK+IL +G +R+ A V
Sbjct: 928 RIDKLKKQLSKSFSMKDLGPAKKILD---KEKKGMRRVXY-----------------ASV 967
Query: 1145 VSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRYL 966
V S LMYAMVCTR DIAYAVGVVSR+L
Sbjct: 968 VGS----------------------------------LMYAMVCTRLDIAYAVGVVSRFL 993
Query: 965 SNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTSGYLITF 786
SNP + HW VKWI+RYLRGTS L+LTF GKP+LVGYTDS+M DVD R S S YL+TF
Sbjct: 994 SNPRRLHWEVVKWIMRYLRGTSKLKLTFRSGKPVLVGYTDSNMVGDVDNRMSASDYLMTF 1053
Query: 785 AGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQSA 606
GG VSWQSRLQKCVALS +CKELL MK+F+ +LGF Q+ Y V+CDNQSA
Sbjct: 1054 LGGVVSWQSRLQKCVALSTXEAEYIATTKSCKELLSMKRFIHDLGFKQQCYXVYCDNQSA 1113
Query: 605 IHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVCR 426
IHL KNSTFH RSKHID+RYHW+ +ND L EL+KI+TD NG+DM+TK+LPREKL+VC
Sbjct: 1114 IHLSKNSTFHTRSKHIDLRYHWVIYALNDNLFELEKINTDHNGSDMLTKSLPREKLEVCC 1173
Query: 425 LIAGMVNPST 396
IA M +PST
Sbjct: 1174 SIAEMASPST 1183
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 1324 bits (3426), Expect = 0.0
Identities = 674/1331 (50%), Positives = 918/1331 (68%), Gaps = 14/1331 (1%)
Frame = -3
Query: 4361 MVNLNGSN-YQIWKGKMEDLLYVKDYYAPV-FETSKPDNKTDAEWKILHRQVCGYIRQWV 4188
+ NG N + W+ +M DLL + + + ++ KPD +W L + IR +
Sbjct: 8 VAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHL 67
Query: 4187 DDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQG 4008
D+V+N+I DE AR +W +LE LY KT NKL+L KQ+ +L +GT HLN F G
Sbjct: 68 SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127
Query: 4007 IINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMR 3828
+I QLA + +K ++E + + +L +LP S++ T++ + + D+ +LNE+MR
Sbjct: 128 LITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTT-IELKDVTSALLLNEKMR 186
Query: 3827 RKSQGSFTQSDVLVTEKRGRSKSR--------GPKGKDRGRSKSNRYANAECYHCGIKGH 3672
+K + Q L+TE RGRS R G +GK + RSKS R N CY+C GH
Sbjct: 187 KKPEN---QGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKS-RVRN--CYNCNQPGH 240
Query: 3671 IKKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDS 3492
K+ C V I E + ++L+ E+ WVVD+
Sbjct: 241 FKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVV--LFINEEEECMHLSGPESEWVVDT 298
Query: 3491 GASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPD 3312
AS HAT + LF Y +GDFG V+MG+ +K G+GD+ ++T+ G L+LK+V+HVPD
Sbjct: 299 AASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPD 358
Query: 3311 LRLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMND 3132
LR+NLIS LD +G+ S F+N +W+LT+GSLV+A+G +LY A+ +NA D
Sbjct: 359 LRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQD 418
Query: 3131 GNKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRM 2952
++LWH R+ H+SEKGL+ILAK++LI K T++ C +CL GKQ RV+F+TSS ++
Sbjct: 419 EISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKL 478
Query: 2951 PGILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVE 2772
ILDLVYSDVCGPM+ +++GG YFVTFIDD SRK WVY LKTKDQVF VF++FHALVE
Sbjct: 479 -NILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVE 537
Query: 2771 RQTGKKLKCIRTDNGGEYLG-SFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVR 2595
R+TG+KLK +R+DNGGEY F+EYC GIRH+KT P TPQ NG+AERMNRT+VE+VR
Sbjct: 538 RETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVR 597
Query: 2594 CLLSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFV 2415
+L A LP+SFWGEA+ T +++N +P VPL F++P+RVW+ K++SY+HL+VFGC+ F
Sbjct: 598 SMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFA 657
Query: 2414 HIPKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKAD 2235
H+PK++R+KLD K+ C+F+GYG +EFGYR +DPV+KK+IRSRD VF E + + ++
Sbjct: 658 HVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSE 717
Query: 2234 KTTKS---NDDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPAD 2064
K N + P D+ ++ + + I+ Q++E V+E P
Sbjct: 718 KVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDE-GVEEVEHPTQ 776
Query: 2063 DQTVEVEAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEI 1884
+ E P+ RYP++EY L++D EPE+ +E + KN+ + AM++E+
Sbjct: 777 GE--EQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEM 834
Query: 1883 KSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEI 1704
+SL +N TY LV+LP+GKR LK KWV+++K+D R+KARLVVKGF QKKGIDFDEI
Sbjct: 835 ESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEI 894
Query: 1703 FSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVC 1524
FSPVVKM+SIR +L LAASLDLE+EQ+DVKTAFLHG+L+ EIYM+QPEGF V GK++ VC
Sbjct: 895 FSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVC 954
Query: 1523 KLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLI 1344
KL KSLYGLKQAPR WY KF+S M Q Y KT SD CV+ ++FS+++FIILLLYVDDMLI
Sbjct: 955 KLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLI 1014
Query: 1343 VGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFN 1164
VG++ I +LK LSKSF MKDLGPA+QILG+KI R+R +++L++SQE+YI +VLERFN
Sbjct: 1015 VGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFN 1074
Query: 1163 MIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVG 984
M AK VS+PLA H KL P+T EEK +MA++PY+SAVGSLMYAMVCTRPDIA+AVG
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134
Query: 983 VVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTS 804
VVSR+L NPGKEHW AVKWILRYLRGT+ L FG P+L GYTD+DMA D+D RKS++
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSST 1194
Query: 803 GYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVF 624
GYL TF+GGA+SWQS+LQKCVALS KE++W+K+F++ELG +Q+ YVV+
Sbjct: 1195 GYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVY 1254
Query: 623 CDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPRE 444
CD+QSAI L KNS +HAR+KHIDVRYHW+R++++D+ L++ KI T++N ADM+TK +PR
Sbjct: 1255 CDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRN 1314
Query: 443 KLDVCRLIAGM 411
K ++C+ + GM
Sbjct: 1315 KFELCKELVGM 1325
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 1226 bits (3172), Expect = 0.0
Identities = 637/1326 (48%), Positives = 885/1326 (66%), Gaps = 17/1326 (1%)
Frame = -3
Query: 4337 YQIWKGKMEDLLYVKDYYAPVF-ETSKPDNKTDAEWKILHRQVCGYIRQWVDDNVLNHIS 4161
+ +W+ +M+DLL + + + ++ KP++ +W+ L + IR + D+V+N+I
Sbjct: 18 FSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAASAIRLHLTDDVVNNIV 77
Query: 4160 DETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQGIINQLAGMN 3981
DE A +W KLE LY KT NKL+L KQ+ +L +GT HLN G+I QLA +
Sbjct: 78 DEESACGIWTKLENLYMSKTLTNKLYLKKQLYTLHMDEGTNFLSHLNVLNGLITQLANLG 137
Query: 3980 IKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMRRKSQGSFTQ 3801
+K ++E + + +L +LP S++T T++ + D + D+ +LNE+MR+K +
Sbjct: 138 VKIEEEDKRIVLLNSLPSSYDTLSTTILHGK-DSIQLKDVTSALLLNEKMRKKPEN---H 193
Query: 3800 SDVLVTEKRGRSKSR--------GPKGKDRGRSKSNRYANAECYHCGIKGHIKKHCRKWX 3645
V +TE RGRS R G +GK + RSKS CY+C GH K+ C
Sbjct: 194 GQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSKA---RNCYNCDQPGHFKRDCPNPK 250
Query: 3644 XXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDSGASIHATSQ 3465
V LI E + ++LA E+ WVVD+ AS HAT
Sbjct: 251 RGKGESSGQKNDDNTAAMVQNNDDVV--LLINEEEECMHLAGTESEWVVDTAASYHATPV 308
Query: 3464 KYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRLNLISVG 3285
+ LF Y +GD+GNV+MG+ +K G+GD+ +T+ G L+LK+V+HVPDLR+NLIS
Sbjct: 309 RDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCTLVLKDVRHVPDLRMNLISGI 368
Query: 3284 KLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNKIELWHS 3105
LD +G+ + F+N +W+LT+G+LV+A+G +LY A+ +NA ++ N +LWH
Sbjct: 369 ALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNAEICQGELNAAHEENSADLWHK 428
Query: 3104 RLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGILDLVYS 2925
R+ H SEKGL+IL+K++LI K T++ C + L GKQ RV+F+TSS R ILDLVYS
Sbjct: 429 RMGHTSEKGLQILSKKSLISFTKGTTIKPCNYWLFGKQHRVSFQTSS-ERKSNILDLVYS 487
Query: 2924 DVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQTGKKLKC 2745
DVCGPM+ +++GG YFVTFIDD SRK WVY + KDQVF VF++FHALVER+TG+K K
Sbjct: 488 DVCGPMEIESMGGNKYFVTFIDDASRKLWVYIFRAKDQVFQVFQKFHALVERETGRKRKR 547
Query: 2744 IRTDNGGEYLG-SFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSEAGLP 2568
+RTDNGGEY F+EYC GIRH+KT P TPQ NG+AERMNRT+VE+VR +L A LP
Sbjct: 548 LRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 607
Query: 2567 RSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPKDERSK 2388
++FWGEA+ T +++N +P VPL+FD+P+RVW+ K++SY+HL+VFGCK F H+PK++R+K
Sbjct: 608 KTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMSYSHLKVFGCKAFAHVPKEQRTK 667
Query: 2387 LDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKTTKSNDDL 2208
LD K+ C+F+GYG +EFGYR +D V+KK+IRSRD +F E + + ++K K N +
Sbjct: 668 LDDKSVPCIFIGYGDEEFGYRLWDLVKKKVIRSRDVIFRESEVGTAADLSEKAKKKNGII 727
Query: 2207 VDLDVTP-----PQHVPVQVDDDA-QNNQPDLDDIDAPTQVEEDNVDETMPPADDQTVEV 2046
+L P P +D+ Q QPD +I + DN ++ P ++Q+
Sbjct: 728 PNLVTIPSSSNHPTSAESTIDEVVEQEEQPD--EIVEQGEQLGDNTEQMEYPEEEQS--- 782
Query: 2045 EAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHEN 1866
P+ +YP+SEY L+ GEPE +E + K++W+ AM +E+ SL +N
Sbjct: 783 -QPLRRSERQRVESTKYPSSEYVLIKYEGEPENLKEVLSHPEKSQWMKAMHEEMGSLQKN 841
Query: 1865 DTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVVK 1686
TY LV+LP+GKR LK KWV+++K+D + R+KARLVVKGF QKKGIDFDEIFSPVVK
Sbjct: 842 GTYQLVELPKGKRPLKCKWVFKLKKDGNGKLVRYKARLVVKGFEQKKGIDFDEIFSPVVK 901
Query: 1685 MSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKSL 1506
M+SIR +L +AASLDLE+EQ+DVKTAFLHG+L+ EIYM+Q EGF V GK++ VCKL KSL
Sbjct: 902 MTSIRTILSIAASLDLEVEQLDVKTAFLHGDLEEEIYMEQGEGFEVSGKKHMVCKLNKSL 961
Query: 1505 YGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNTS 1326
YGLKQAPR WY+KF+S M Q Y+ T S CV+ ++FSD +FIILLLY D MLIVG++
Sbjct: 962 YGLKQAPRQWYKKFDSFMKSQTYRNTYSHPCVYFKRFSDKNFIILLLYTDYMLIVGKDKE 1021
Query: 1325 RIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAKV 1146
I +L+K SKSF MKDLGPAKQILG+KI+R+ K+L +S E+YI +VLERFNM AK
Sbjct: 1022 LIAKLRKDFSKSFDMKDLGPAKQILGMKIAREE-QKKLGLSHEKYIERVLERFNMKSAKP 1080
Query: 1145 VSSPLATHFKLGAHQSPSTDE-EKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRY 969
+S+PL ++ KL P+ + EK DMA++PY+SAVGS MYAMVCTRP+I AV VVSR+
Sbjct: 1081 ISTPLVSYLKLTKQMFPTKKKGEKGDMAKVPYSSAVGSFMYAMVCTRPNIV-AVCVVSRF 1139
Query: 968 LSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTSGYLIT 789
L PGKEH AVKWILRYLR T+ F P+ GYT+ DM D+D RKST+ YL T
Sbjct: 1140 LEIPGKEHLEAVKWILRYLRRTTRDYFCFEGSDPISKGYTNVDMEGDLDNRKSTTCYLFT 1199
Query: 788 FAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQS 609
F+GG +SWQS+LQK VALS CKE+LW+K+F++E G +Q+ YVV+C++QS
Sbjct: 1200 FSGGDISWQSKLQKYVALSTTEAKYIAGTEVCKEMLWLKRFLQEHGLHQKEYVVYCESQS 1259
Query: 608 AIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVC 429
A+ L K + +HA +KHID+RYHW+R++++D L++ KI T +N ADM+TK + EK ++
Sbjct: 1260 AMDLSKKAMYHATTKHIDMRYHWIREMVDDGSLQVVKIPTSENPADMVTKVVQNEKFELW 1319
Query: 428 RLIAGM 411
+ + GM
Sbjct: 1320 KELVGM 1325
>gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 990
Score = 1216 bits (3145), Expect = 0.0
Identities = 608/1028 (59%), Positives = 779/1028 (75%), Gaps = 18/1028 (1%)
Frame = -3
Query: 4205 YIRQWVDDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDH 4026
+IRQ+V+DNV NHI++ETHAR+LW+K+E LYA K+GNNKL+L+ +M+L+Y++ + ++DH
Sbjct: 1 FIRQFVEDNVYNHIANETHARTLWKKIESLYASKSGNNKLYLLNCLMNLRYRESSSISDH 60
Query: 4025 LNAFQGIINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSV 3846
LN FQG+++QL+ M IKFDDE LW+L TLP+SWETFR S++NSAP+GV+++ K
Sbjct: 61 LNEFQGLLDQLSRMGIKFDDEFLVLWLLNTLPESWETFRVSITNSAPNGVVSLQAKKSGA 120
Query: 3845 LNEEMRRKSQGSFTQSDVLVTEKRGRSKSRGPKG-KDRGRSKS-NRYANAECYHCGIKGH 3672
NEEMRRK+QGS +QS VLVTE RGRS+ + PKG +++ RSKS +RY N EC++C H
Sbjct: 121 FNEEMRRKAQGSSSQSKVLVTENRGRSQKKEPKGGREKSRSKSKSRYKNVECHYCHKTWH 180
Query: 3671 IKKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEASWVVDS 3492
I+++C W ++ VNL +E+ W+VDS
Sbjct: 181 IQRNCFLWKKE------------------------------NKGKKVNLVSDESMWIVDS 210
Query: 3491 GASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPD 3312
GA++H T +K F SYTSGDFG ++MG++G++K +G+GDV L+T+ G L+L+ VKHVPD
Sbjct: 211 GATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVFLQTNMGMQLLLRGVKHVPD 270
Query: 3311 LRLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMND 3132
+R NLISV LDD G+ + F +G+WKLT+G+LVVARG K S LY +A ++NAM+
Sbjct: 271 VRFNLISVQILDDGGYDNHFGSGKWKLTKGNLVVARGEKNSKLYWTKALVAKDNVNAMD- 329
Query: 3131 GNKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRM 2952
+ LWH RLSHISEKGL LAK++++ +K LEKC HC+AGKQTRV+F+ PSR
Sbjct: 330 -MEASLWHRRLSHISEKGLNCLAKKDVLQGLKIAELEKCSHCMAGKQTRVSFKKHPPSRK 388
Query: 2951 PGILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVE 2772
+L LV+SDVCGP+K K+ GALYFVTFIDD S+K WVY L+ KD V + FKQFHALVE
Sbjct: 389 SKLLQLVHSDVCGPLKVKSFSGALYFVTFIDDCSKKLWVYALQRKD-VLERFKQFHALVE 447
Query: 2771 RQTGKKLKCIRTDNGGEYLGSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRC 2592
RQ+GKKLK IRTDNGGEY G FD YC+Q GI H+KTPPKTPQLN LAERMN TL+ERVRC
Sbjct: 448 RQSGKKLKRIRTDNGGEYCGPFDVYCKQHGIAHEKTPPKTPQLNDLAERMNMTLLERVRC 507
Query: 2591 LLSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVH 2412
+LS+A LP+ FWGEAL T VHV+NLTP V L+ +VPD++W GK+ SY+HLRVFGCK FVH
Sbjct: 508 MLSDAKLPKHFWGEALYTAVHVINLTPTVILNSEVPDKIWFGKNASYDHLRVFGCKAFVH 567
Query: 2411 IPKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADK 2232
IP+DERSKLD KTRQC+F+GYG+DEFGYRFYDP+EKKL+RSRD F+EDQTI DI+K +K
Sbjct: 568 IPRDERSKLDTKTRQCIFIGYGEDEFGYRFYDPIEKKLVRSRDVQFMEDQTIEDIDKVEK 627
Query: 2231 TTKSND-DLVDLDVTPPQHVPVQVDDDAQNN-QP-----DLDD------IDAPTQVEEDN 2091
TT D +L D+D P +P+ D+ + QP D+DD +D P +++D
Sbjct: 628 TTPEKDRNLTDVD---PMRLPIHNLDNVDGSVQPGEQHDDVDDQQLGGGLDVP--IDDDQ 682
Query: 2090 VDETMPP---ADDQTVEVEAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAH 1920
+ M DD + + RY + EY LTDGGEPE +EEA+E
Sbjct: 683 EEHEMSHDENIDDAPEPHQVQLRRSNRQRQPSTRYSSDEYVTLTDGGEPECFEEALESEE 742
Query: 1919 KNEWLDAMKDEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKG 1740
K +WLDAM+DE+KSLH+N TYDLVKLP+GKRAL+N+W++RVKQ+ +++ PR+KARLVVKG
Sbjct: 743 KQQWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFRVKQESNSTSPRYKARLVVKG 802
Query: 1739 FSQKKGIDFDEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPE 1560
F Q+KG+DF+EIFSPVVKMSSIR VL LAA+L+LE+EQMDVKTAFLHG+L+ EIYM QP+
Sbjct: 803 FRQRKGVDFNEIFSPVVKMSSIRAVLSLAATLNLEVEQMDVKTAFLHGDLEEEIYMRQPD 862
Query: 1559 GFRVKGKENYVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDF 1380
GF+VKGKE+ VC+L+KSLYGLKQAPR WY+KFES M EQGY+KTTSDHCVFV+ FSDDDF
Sbjct: 863 GFQVKGKEDCVCRLRKSLYGLKQAPRQWYKKFESFMCEQGYKKTTSDHCVFVKMFSDDDF 922
Query: 1379 IILLLYVDDMLIVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQ 1200
IILLLYVDDMLIVG++ SRIDRLKK+L +SFAMKD+G AKQILGI+I RDR +L++SQ
Sbjct: 923 IILLLYVDDMLIVGKDVSRIDRLKKKLGESFAMKDMGAAKQILGIRIIRDREKGKLWLSQ 982
Query: 1199 EQYIVKVL 1176
EQYI +VL
Sbjct: 983 EQYIKRVL 990
>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 1175 bits (3040), Expect = 0.0
Identities = 628/1313 (47%), Positives = 847/1313 (64%), Gaps = 10/1313 (0%)
Frame = -3
Query: 4319 KMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGYIRQWVDDNVLNHISDETHARS 4140
++ED LY K + P+ KP+ + EW L R+ G IR + NV +I+ E S
Sbjct: 2 QIEDYLYQKGLHEPL-TGKKPEAMKEDEWSFLDRKALGAIRLTLSRNVAFNIAKEKTTAS 60
Query: 4139 LWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQGIINQLAGMNIKFDDEV 3960
L L +Y + + NK+ LI+++ +L+ +G H+N I QL+ + I FD+EV
Sbjct: 61 LMAALSSMYEKPSAANKVHLIRRLFNLRMTEGASTAQHINELNTITIQLSSVGINFDEEV 120
Query: 3959 QGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMRRKSQGSFTQSDVLVTE 3780
+ L +L +LP+SW T++S+S+ + D + VL+EE+RR+ G T S VL TE
Sbjct: 121 RALILLSSLPESWNATVTAVSSSSGSNKLKFDDVRDLVLSEEVRRRETGESTTSSVLHTE 180
Query: 3779 KRGRSKSRGP-KGKDRGRSKS------NRYANAECYHCGIKGHIKKHCRKWXXXXXXXXX 3621
RGRS +RG +GK + RSKS N+ EC++CG GH K CR
Sbjct: 181 SRGRSSTRGTGRGKSKERSKSRNHQSSNKSKTIECWNCGKTGHYKNQCRS---------- 230
Query: 3620 XXXXXXXXXXXDRVSTVTG--DFLIAHEFDVVNLACNEASWVVDSGASIHATSQKYLFAS 3447
V+T +G D LI +L E SWV+DSGAS HATSQK LF +
Sbjct: 231 -ASKKQEVKDEANVATTSGGGDALIC------SLENKEESWVIDSGASFHATSQKELFEN 283
Query: 3446 YTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRLNLISVGKLDDEG 3267
Y SG+ G V +G+ + VG G V ++ NG++ LKNV+H+PDL NLISVG+L +G
Sbjct: 284 YVSGNLGKVYLGNEQSCEIVGKGVVKIKL-NGSVWELKNVRHIPDLTKNLISVGQLASDG 342
Query: 3266 FCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNKIELWHSRLSHIS 3087
+ ++F QWK+++G++ +ARG K +LY ++ A ++ N LWH RL H+S
Sbjct: 343 YTTIFQGEQWKISKGAMTIARGKKSGTLYKTTEACHLITVAANDNPN---LWHQRLGHMS 399
Query: 3086 EKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGILDLVYSDVCGPM 2907
EKG+KI+ + +P +++ +E C C+ GKQ RV+F+ + L+LV+SDV GP
Sbjct: 400 EKGMKIMHSKGKLPGLQSMEIEMCEDCIFGKQKRVSFQKGGRTPKKERLELVHSDVWGPT 459
Query: 2906 KTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQTGKKLKCIRTDNG 2727
++ G YFVTFIDDHSRK WVY LK K +VF+ FK + A+VE +TG K+K +RTDNG
Sbjct: 460 TVSSISGKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKAMVENETGLKIKKLRTDNG 519
Query: 2726 GEYLGS-FDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSEAGLPRSFWGE 2550
GEY + F +C + GIR ++T P TPQ NG+AERMNRTL ER R + ++GLP+ FW E
Sbjct: 520 GEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMNRTLTERARSMRMQSGLPKQFWAE 579
Query: 2549 ALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPKDERSKLDGKTR 2370
A++T +++N P VPL+ +P+ VWSGK++ +HLRVFGC +VHI R+KLD K++
Sbjct: 580 AVNTAAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVAYVHISDQGRNKLDPKSK 639
Query: 2369 QCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKTTKSNDDLVDLDVT 2190
+C F+GYG+DEFGYR +D KK+IRSRD +F E +D + T+ SN ++
Sbjct: 640 KCTFIGYGEDEFGYRLWDDENKKMIRSRDVIFNEGVMYKDKQN---TSASNSKPIE---- 692
Query: 2189 PPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPADDQTVEVEAPIXXXXXXXX 2010
P +V V DDA + P VE E++ P Q E +
Sbjct: 693 -PTYVEV---DDALESPP----------VESSQSVESIEPDRGQQCVPEPELRRSSRVPV 738
Query: 2009 XXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHENDTYDLVKLPEGK 1830
RY Y LLTDGGEPE Y EA + ++W AMK+E+KSL N T++L KLP GK
Sbjct: 739 PNRRY--MNYMLLTDGGEPEDYSEACQTRDASKWELAMKEEMKSLISNQTWELAKLPMGK 796
Query: 1829 RALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVVKMSSIRVVLGLAA 1650
+AL NKWVYRVK+ EH R+KARLVVKGF QK+G+D+ EIFSPVVK+++IR VL + A
Sbjct: 797 KALHNKWVYRVKE-EHDGSKRYKARLVVKGFQQKEGVDYTEIFSPVVKLNTIRTVLSIVA 855
Query: 1649 SLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKSLYGLKQAPRLWYQ 1470
S +L +EQ+DVKTAFLHG+LD EIYM QPEGF KGKEN VC+LKKSLYGLKQAPR WY+
Sbjct: 856 SEELYLEQLDVKTAFLHGDLDEEIYMHQPEGFSEKGKENMVCRLKKSLYGLKQAPRQWYR 915
Query: 1469 KFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNTSRIDRLKKQLSKS 1290
KFES M ++G++K +DHC F ++++ +IILLLYVDDML+ G N I LKKQLSK
Sbjct: 916 KFESFMHKEGFKKCNADHCCFFKRYNSS-YIILLLYVDDMLVAGSNMIEIRNLKKQLSKE 974
Query: 1289 FAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAKVVSSPLATHFKLG 1110
F MKDLGPAK+ILG++I+RD+ L +SQ +YI +VL+RFNM AK VS+PLA+HF+L
Sbjct: 975 FDMKDLGPAKKILGMQITRDKQKGTLQLSQAEYINRVLQRFNMSNAKPVSTPLASHFRLS 1034
Query: 1109 AHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPGKEHWNAVK 930
QSP T+EEKE MA+ PYASA+GSLMYAMVCTRPDI YAVGVVSR++SNPGK HW AVK
Sbjct: 1035 TDQSPKTEEEKELMAKTPYASAIGSLMYAMVCTRPDIGYAVGVVSRFMSNPGKAHWEAVK 1094
Query: 929 WILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRKSTSGYLITFAGGAVSWQSRLQ 750
WILRYLR T L F G+ + GY D+D A ++D R+ST+GY+ T AVSW S++Q
Sbjct: 1095 WILRYLRATKEKCLCFSKGELKVQGYVDADFAGEIDHRRSTTGYIFTVGTTAVSWMSQIQ 1154
Query: 749 KCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQSAIHLGKNSTFHAR 570
K VALS A KEL+W++ + ELGF QER V+ D+QSAIHL KNSTFH+R
Sbjct: 1155 KIVALSTTEAEYVAVTEASKELIWLQGLLTELGFIQERSVLHSDSQSAIHLAKNSTFHSR 1214
Query: 569 SKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVCRLIAGM 411
+KHID+RYH++R ++ D++L L KI N ADM+TK + EKL +C G+
Sbjct: 1215 TKHIDLRYHFIRSLLEDEVLTLRKILGSKNPADMLTKVVTTEKLRLCSTSIGL 1267
>emb|CAN69340.1| hypothetical protein VITISV_032634 [Vitis vinifera]
Length = 1298
Score = 1157 bits (2994), Expect = 0.0
Identities = 595/1328 (44%), Positives = 845/1328 (63%), Gaps = 15/1328 (1%)
Frame = -3
Query: 4367 SRMVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGYIRQWV 4188
S + +G+++ W+ ++ED LY + + P+ T KP++ EW +L RQV G IR +
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGT-KPESMKAEEWALLDRQVLGVIRLTL 67
Query: 4187 DDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQG 4008
+V +++ E L + L +Y + + NNK+ L+K++ +LK + + HLN F
Sbjct: 68 SRSVAHNVVKEKTTADLMKALSGMYEKXSANNKVHLMKKLFNLKMAENASVAQHLNEFNT 127
Query: 4007 IINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMR 3828
I NQL+ + I FDDE++ L +L +LP+SWE R ++SNS + + + +L EE+R
Sbjct: 128 ITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIR 187
Query: 3827 RKSQGSFTQS-DVLVTEKRGRSKSRGP-------KGKDRGRSKSNRYANAECYHCGIKGH 3672
R+ G + S L E RGR +R + +R RSKS +C++CG GH
Sbjct: 188 RRDAGETSGSGSALNLETRGRGNNRNSNHGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGH 247
Query: 3671 IKKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEA--SWVV 3498
K+ C+ + + + + D + LA + WV+
Sbjct: 248 FKRQCKS-------------------PKKKNEDDSANAVTEEVXDALLLAVDSPLDDWVL 288
Query: 3497 DSGASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHV 3318
DSGAS H T + + +Y +GDFG V + D VG+GDV + NG++ +L+ V+H+
Sbjct: 289 DSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHI 348
Query: 3317 PDLRLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAM 3138
PDLR NLISVG+LDDEG +F G WK+T+G V+ARG K +LY+ + +I
Sbjct: 349 PDLRRNLISVGQLDDEGHAILFVGGTWKVTKGVRVLARGKKTGTLYMTSCPR--DTIAVA 406
Query: 3137 NDGNKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPS 2958
+ LWH RL H+SEKG+K+L + +P++K+ + C C+ GKQ +V+F + +
Sbjct: 407 DASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRT 466
Query: 2957 RMPGILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHAL 2778
L+LV++D+ GP +LGG+ Y++TFIDD SRK WVY LK K VF FK++ A+
Sbjct: 467 PKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAM 526
Query: 2777 VERQTGKKLKCIRTDNGGEYL-GSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVER 2601
VE +TG K+KC+R+DNGGEY+ G F EYC QGIR +KT P TPQ NG+AERMNRTL ER
Sbjct: 527 VETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNER 586
Query: 2600 VRCLLSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKT 2421
R + AGLP++FW +A+ST +++N P VP++F +P+ VWSGK++ ++HL+VFGC +
Sbjct: 587 ARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVS 646
Query: 2420 FVHIPKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRD--- 2250
+VHI D RSKLD K++ C F+GYG ++FGYRF+D +K+IRSR+ +F E +D
Sbjct: 647 YVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRLT 706
Query: 2249 -IEKADKTTKSNDDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMP 2073
+ + + V+LD V + ++D +N +D + P + P
Sbjct: 707 VTSXVTEIDQKKSEFVNLDELTESTVQKRGEEDKENVNSKVD-LRTPVVEVRRSSRNIRP 765
Query: 2072 PADDQTVEVEAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMK 1893
P P Y LLTDGGEPE Y EA++D + ++W AMK
Sbjct: 766 PQ---------------------RYSPVLNYLLLTDGGEPECYNEALQDENSSKWELAMK 804
Query: 1892 DEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDF 1713
DE+ SL N T++L +LP GK+AL NKWVYR+K +EH R+KARLVVKGF QK+GID+
Sbjct: 805 DEMDSLLGNQTWELTELPVGKKALHNKWVYRIK-NEHDGSKRYKARLVVKGFQQKEGIDY 863
Query: 1712 DEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKEN 1533
EIFSPVVKMS+IR+VLG+ A +L +EQ+DVKT FLHG+L+ ++YM QPEGF V+G+EN
Sbjct: 864 IEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKTTFLHGDLEEDLYMIQPEGFIVQGQEN 923
Query: 1532 YVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDD 1353
VCKL+KSLYGLKQAPR WY+KF++ M G+++ +DHC +V+ F D+ +IILLLYVDD
Sbjct: 924 LVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSF-DNSYIILLLYVDD 982
Query: 1352 MLIVGRNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLE 1173
MLI G + +I+ LKKQLSK FAMKDLG AKQILG++I RD+ N L +SQ +Y+ KVL
Sbjct: 983 MLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLS 1042
Query: 1172 RFNMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAY 993
RFNM +AK VS+PL +HFKL QSP T+EE++ M+++PYAS +GSLMYAMVCTRPDIA+
Sbjct: 1043 RFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASTIGSLMYAMVCTRPDIAH 1102
Query: 992 AVGVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAADVDTRK 813
AVG+VSR++S PGK++W AVKWILRYL+G+ L F L GY D+D A D+D+RK
Sbjct: 1103 AVGIVSRFMSRPGKQNWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRK 1162
Query: 812 STSGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERY 633
ST+G++ T G A+SW S LQK V LS A KE++W+ F++ELG QE
Sbjct: 1163 STTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMG 1222
Query: 632 VVFCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKAL 453
++ D+QSAI L KNS FH++SKHI +YH++R ++ DKL+ L+KI N ADM+TK +
Sbjct: 1223 ILHSDSQSAIFLAKNSAFHSKSKHIQTKYHFIRYLVEDKLVILEKICGSKNPADMLTKGV 1282
Query: 452 PREKLDVC 429
EKL +C
Sbjct: 1283 TIEKLKLC 1290
>gb|KYP59064.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1300
Score = 1155 bits (2987), Expect = 0.0
Identities = 611/1328 (46%), Positives = 862/1328 (64%), Gaps = 13/1328 (0%)
Frame = -3
Query: 4349 NGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGYIRQWVDDNVLN 4170
NGS++ W+ +ME LY KD +AP+ E KP+ +D EWK+L R+ I + NV
Sbjct: 11 NGSDFGFWRMQMEAYLYGKDLHAPLAE--KPERMSDEEWKVLDRKAMSAIILSLSRNVAY 68
Query: 4169 HISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQGIINQLA 3990
H+ + + Q L +Y + + NK+ L+K++ L+ ++ + DHLN F + QLA
Sbjct: 69 HVKGAKSTKEVLQTLADMYEKPSAMNKVMLMKKLFKLQMEERKSVADHLNDFNQLTTQLA 128
Query: 3989 GMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMRRKSQGS 3810
+NI+FDDEV+ L +L +LPDSW+ TS+S S+ + D + +LNEE RR G
Sbjct: 129 SVNIEFDDEVKALILLSSLPDSWDVVVTSVSTSSGKEKMKFDNIRDMMLNEETRRNQAGG 188
Query: 3809 FTQSDVLVTEKRGRSKSRGP---KGKDRGRSKSNRYANAECYHCGIKGHIKKHCRKWXXX 3639
+ S L TE RGR +RG + K +GR+K + C++C GH+K CR
Sbjct: 189 SSGS-ALHTESRGRPDTRGKFRGRSKSKGRNKGKK--EMVCWNCEKPGHMKSECRA---- 241
Query: 3638 XXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEAS--WVVDSGASIHATSQ 3465
T + I D + L+ + +S WV+DSGAS H+ S+
Sbjct: 242 ---------------PKKEKEGRTANAAIEETVDALLLSVSSSSDDWVMDSGASFHSCSR 286
Query: 3464 KYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHVPDLRLNLISVG 3285
+ + YT+GDFG V + DN K VG GDV ++ +NG+ L++V+H+P L+ NLISVG
Sbjct: 287 RDIMEPYTTGDFGMVYLADNKPLKIVGKGDVRIKYANGSCWTLRDVRHIPGLKRNLISVG 346
Query: 3284 KLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAMNDGNKIELWHS 3105
+LD +GF MF +G+WK+++G++ +ARG K +LY+ A + +I ++ +LWH+
Sbjct: 347 QLDSDGFHIMFGDGKWKVSKGAMTLARGLKSGTLYM--AGGSNPNIPFAGAVSQADLWHN 404
Query: 3104 RLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPSRMPGILDLVYS 2925
RL H+SEKG+ +L +P++K+ + C HC+ GKQ RV+F T+ + L+LV++
Sbjct: 405 RLGHMSEKGMSVLKSIGRLPELKSVDVGLCEHCVLGKQKRVSFMTTGRTPKMKKLELVHT 464
Query: 2924 DVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHALVERQTGKKLKC 2745
D+ GP +LGG+ Y++TF+DD +RK WVY LK K FD F+++ ALVE +TG ++KC
Sbjct: 465 DLWGPAPVISLGGSTYYMTFVDDCTRKVWVYFLKRKSDAFDTFRRWRALVENETGLQVKC 524
Query: 2744 IRTDNGGEYLG-SFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSEAGLP 2568
+R+DNGGEY + EYC +GIR QKT P TPQ NG+AERMNRTL ER RC+ ++GLP
Sbjct: 525 LRSDNGGEYNSEAIKEYCADRGIRMQKTIPGTPQQNGVAERMNRTLNERARCMRLKSGLP 584
Query: 2567 RSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKTFVHIPKDERSK 2388
+ FW EA+ST ++N P VPL+ +P+ VWSGK++ + LR FGC +V D+R+K
Sbjct: 585 KMFWAEAVSTAAFLINRGPSVPLNNRIPEEVWSGKEVDLSFLRTFGCLAYVL--NDDRTK 642
Query: 2387 LDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRDIEKADKTTKSNDDL 2208
LD K+ +C F+GYG DEFGY+F+D + +K+IRSR+ VF E +D +++ K ++
Sbjct: 643 LDAKSIKCTFIGYGTDEFGYKFWDDLNRKIIRSRNVVFDEGMMYKDKKESLNDGKMEKEV 702
Query: 2207 VDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMPPAD---DQTVEVEAP 2037
V LD++ + +P D+D+ Q + D Q EE++ E PP + + E P
Sbjct: 703 VGLDISNTR-IPRPADNDSVGVQMEETD-----QTEEESEPEPPPPFEFRATRETESRTP 756
Query: 2036 IXXXXXXXXXXXRY---PASEYALLTDGGEPETYEEAIEDAHKNEWLDAMKDEIKSLHEN 1866
+ P+ Y LLTD GEPE Y EA+ D HK++W AM DE+ SL +N
Sbjct: 757 LALGRVTRKRRAPERYSPSLYYLLLTDCGEPECYAEAVNDDHKSKWELAMDDEMCSLKKN 816
Query: 1865 DTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDFDEIFSPVVK 1686
DT++L +LP+GK+AL+N+WVYRVK+ E + R+KARLVVKGF Q+ GIDF ++F+PVVK
Sbjct: 817 DTWELCQLPQGKKALQNRWVYRVKE-ESDGKKRYKARLVVKGFQQRYGIDFTDVFTPVVK 875
Query: 1685 MSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKENYVCKLKKSL 1506
+++IR+VL + A+ +LE++QMDVKTAFLHG+L+ EIYM QPEG+ KG + VC+LKKSL
Sbjct: 876 ITTIRLVLSMVAAENLELQQMDVKTAFLHGDLEEEIYMVQPEGY--KGDDQQVCRLKKSL 933
Query: 1505 YGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDDMLIVGRNTS 1326
YGLKQAPR WY+KF++ M E GY + ++DHC +V++F D FIILLLYVDDMLI G N
Sbjct: 934 YGLKQAPRQWYRKFDNFMLEIGYSRCSADHCCYVKRFGDS-FIILLLYVDDMLIAGSNVM 992
Query: 1325 RIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQYIVKVLERFNMIKAKV 1146
I+RLK QLS+ F MKDLG A+QILG+KI+RDR +L++SQ +YI KVL RF M AK
Sbjct: 993 EINRLKDQLSRRFDMKDLGEARQILGMKITRDRNTGKLWLSQSEYIEKVLCRFKMEAAKP 1052
Query: 1145 VSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCTRPDIAYAVGVVSRYL 966
V PL + FKL SP D E+E M PYASA+GSLMYAMVCTRPDIA+AVGVVSR++
Sbjct: 1053 VGVPLGSQFKLSNKDSPKDDSERERMRGTPYASAIGSLMYAMVCTRPDIAHAVGVVSRFM 1112
Query: 965 SNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMA-ADVDTRKSTSGYLIT 789
SNPG HW AVKWILRYLRGT L FG G L G+ D+D A +D+D R+ST+GY+ T
Sbjct: 1113 SNPGVMHWEAVKWILRYLRGTKDRVLMFGRGNLTLSGFVDADFAGSDLDKRRSTTGYVFT 1172
Query: 788 FAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELGFNQERYVVFCDNQS 609
+ G A+SW S+LQK VALS A KEL+W++ F+ ELG +E ++ D+QS
Sbjct: 1173 YGGTAISWISKLQKIVALSTTEAEYVAVTEAAKELVWLQNFLNELGRPREYVALYSDSQS 1232
Query: 608 AIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGADMMTKALPREKLDVC 429
AIHL KN FH+R+KHI+V+YH++R ++ K L+L+KI D N ADM+TKA+ EKL +C
Sbjct: 1233 AIHLAKNPAFHSRTKHIEVKYHFIRHLLEKKALQLEKIQGDKNPADMLTKAVTLEKLKLC 1292
Query: 428 RLIAGMVN 405
G+ N
Sbjct: 1293 AASTGLDN 1300
>emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]
Length = 1287
Score = 1133 bits (2930), Expect = 0.0
Identities = 592/1341 (44%), Positives = 840/1341 (62%), Gaps = 21/1341 (1%)
Frame = -3
Query: 4367 SRMVNLNGSNYQIWKGKMEDLLYVKDYYAPVFETSKPDNKTDAEWKILHRQVCGYIRQWV 4188
S + +G+++ W+ ++ED LY + + P+ T KP++ EW +L RQV G IR +
Sbjct: 9 SGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGT-KPESMKAEEWALLDRQVLGVIRLTL 67
Query: 4187 DDNVLNHISDETHARSLWQKLEQLYARKTGNNKLFLIKQMMSLKYKDGTPMTDHLNAFQG 4008
+V +++ E L + L +Y + + NNK+ L+K++ +LK + + HLN F
Sbjct: 68 SRSVAHNVVKEKTTXDLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNT 127
Query: 4007 IINQLAGMNIKFDDEVQGLWILGTLPDSWETFRTSLSNSAPDGVITMDLAKGSVLNEEMR 3828
I NQL+ + I FDDE++ L +L +LP+SWE R ++SNS + + + +L EE+R
Sbjct: 128 ITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIR 187
Query: 3827 RKSQGSFTQS-DVLVTEKRGRSKSRGP-------KGKDRGRSKSNRYANAECYHCGIKGH 3672
R+ G + S L E RGR +R + +R RSKS +C++CG GH
Sbjct: 188 RRDAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGH 247
Query: 3671 IKKHCRKWXXXXXXXXXXXXXXXXXXXXDRVSTVTGDFLIAHEFDVVNLACNEA--SWVV 3498
K+ C+ D + VT + D + LA + WV+
Sbjct: 248 FKRQCKS--------------PKKKNEDDSANAVTEEVQ-----DALLLAVDSPLDDWVL 288
Query: 3497 DSGASIHATSQKYLFASYTSGDFGNVRMGDNGLAKAVGMGDVHLETSNGTLLILKNVKHV 3318
DSGAS H T + + +Y +GDFG V + D VG+GDV + NG++ +L+ V+H+
Sbjct: 289 DSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHI 348
Query: 3317 PDLRLNLISVGKLDDEGFCSMFSNGQWKLTRGSLVVARGHKYSSLYLMQAKQFDRSINAM 3138
PDLR NLISVG+LDDEG +F G WK+T+G+ V+A G K +LY+ + +I
Sbjct: 349 PDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLAHGKKTGTLYMTSCPR--DTIAVA 406
Query: 3137 NDGNKIELWHSRLSHISEKGLKILAKENLIPDIKNETLEKCGHCLAGKQTRVAFRTSSPS 2958
+ LWH RL H+SEKG+K+L + +P++K+ + C C+ GKQ +V+F + +
Sbjct: 407 DASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRT 466
Query: 2957 RMPGILDLVYSDVCGPMKTKTLGGALYFVTFIDDHSRKSWVYTLKTKDQVFDVFKQFHAL 2778
L+LV++D+ GP +LGG+ Y++TFIDD SRK W +
Sbjct: 467 PKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSRKKW-----------------KXM 509
Query: 2777 VERQTGKKLKCIRTDNGGEYL-GSFDEYCRQQGIRHQKTPPKTPQLNGLAERMNRTLVER 2601
VE +T K+KC+R+DNGGEY+ G F EYC QGIR +KT P TPQ NG+AERMNRTL ER
Sbjct: 510 VETETSLKVKCLRSDNGGEYIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNER 569
Query: 2600 VRCLLSEAGLPRSFWGEALSTVVHVLNLTPCVPLDFDVPDRVWSGKDISYNHLRVFGCKT 2421
R + AGLP++FW +A+ST +++N P VP++F +P+ VWSGK++ ++HL+VFGC +
Sbjct: 570 ARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCIS 629
Query: 2420 FVHIPKDERSKLDGKTRQCVFLGYGQDEFGYRFYDPVEKKLIRSRDAVFVEDQTIRD--- 2250
+VHI D RSKLD K++ C F+GYG ++FGYRF+D +K+IRSR+ +F E +D
Sbjct: 630 YVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSS 689
Query: 2249 -IEKADKTTKSNDDLVDLDVTPPQHVPVQVDDDAQNNQPDLDDIDAPTQVEEDNVDETMP 2073
+ + + + V+LD V ++D +N +D + P + T P
Sbjct: 690 VVSDVTEIDQKKSEFVNLDELTKSTVQKGGEEDKENVNSQVD-LSTPVVEVRRSSRNTRP 748
Query: 2072 PADDQTVEVEAPIXXXXXXXXXXXRYPASEYALLTDGGEPETYEEAIEDAHKNEWLDAMK 1893
P P Y LLTDGGEPE Y+EA++D + ++W AMK
Sbjct: 749 PQ---------------------RYSPVLNYLLLTDGGEPECYDEALQDENSSKWELAMK 787
Query: 1892 DEIKSLHENDTYDLVKLPEGKRALKNKWVYRVKQDEHTSRPRFKARLVVKGFSQKKGIDF 1713
DE+ SL N T++L +LP GK+AL NKWVYR+K +EH R+KARLVVKGF QK+GID+
Sbjct: 788 DEMDSLLGNQTWELTELPVGKKALHNKWVYRIK-NEHDGSKRYKARLVVKGFQQKEGIDY 846
Query: 1712 DEIFSPVVKMSSIRVVLGLAASLDLEIEQMDVKTAFLHGELDREIYMDQPEGFRVKGKEN 1533
EIFSPVVKMS+IR+VLG+ A+ +L +EQ+DVKTAFLHG+L+ ++YM QPEGF V+G+EN
Sbjct: 847 TEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQEN 906
Query: 1532 YVCKLKKSLYGLKQAPRLWYQKFESVMGEQGYQKTTSDHCVFVQKFSDDDFIILLLYVDD 1353
VCKL+KSLYGLKQAPR WY+KF++ M G+++ +DHC +V+ F D+ +IILLLYVDD
Sbjct: 907 LVCKLRKSLYGLKQAPRQWYKKFDNXMHRIGFKRCEADHCCYVKSF-DNSYIILLLYVDD 965
Query: 1352 MLIVG------RNTSRIDRLKKQLSKSFAMKDLGPAKQILGIKISRDRGNKRLYMSQEQY 1191
MLIVG N +I+ LKKQLSK FAMKDLG AKQILG++I RD+ N L +SQ +Y
Sbjct: 966 MLIVGSDIEKINNLKKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEY 1025
Query: 1190 IVKVLERFNMIKAKVVSSPLATHFKLGAHQSPSTDEEKEDMARIPYASAVGSLMYAMVCT 1011
+ KVL RFNM +AK V +PL +HFKL QSP T+EE++ M+++PYASA+GSLMYAMVCT
Sbjct: 1026 VKKVLSRFNMNEAKPVXTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCT 1085
Query: 1010 RPDIAYAVGVVSRYLSNPGKEHWNAVKWILRYLRGTSSLRLTFGCGKPLLVGYTDSDMAA 831
RPDIA+AVGVVSR++S PGK+HW AVKWILRYL+G+ L F L GY D+D A
Sbjct: 1086 RPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAG 1145
Query: 830 DVDTRKSTSGYLITFAGGAVSWQSRLQKCVALSXXXXXXXXXXXACKELLWMKKFMEELG 651
D+D+RKST+G++ T G +SW S LQK V LS A KE++W+ F++ELG
Sbjct: 1146 DIDSRKSTTGFVFTLGGTXISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 1205
Query: 650 FNQERYVVFCDNQSAIHLGKNSTFHARSKHIDVRYHWMRDVINDKLLELDKIHTDDNGAD 471
QE ++ D+QSAI L KNS FH++SKHI +YH++R ++ DKL+ L+KI N AD
Sbjct: 1206 KKQEMGILHSDSQSAIFLAKNSAFHSKSKHIQTKYHFIRYLVEDKLVILEKICGSKNPAD 1265
Query: 470 MMTKALPREKLDVCRLIAGMV 408
M+TK + EKL +C G++
Sbjct: 1266 MLTKGVTIEKLKLCAASIGLL 1286