BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00017188
         (2615 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]  1049   0.0  
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   885   0.0  
gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposo...   865   0.0  
gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposo...   855   0.0  
gb|KYP61490.1| Retrovirus-related Pol polyprotein from transposo...   874   0.0  
gb|KYP46287.1| Retrovirus-related Pol polyprotein from transposo...   842   0.0  
ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotei...   875   0.0  
ref|XP_008359946.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   867   0.0  
gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposo...   848   0.0  
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]   812   0.0  
gb|KYP55941.1| Retrovirus-related Pol polyprotein from transposo...   798   0.0  
gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposo...   810   0.0  
gb|ABW74566.1| integrase [Boechera divaricarpa]                       801   0.0  
emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]   824   0.0  
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...   805   0.0  
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo...   805   0.0  
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   824   0.0  
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...   803   0.0  
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   799   0.0  
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     792   0.0  

>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score = 1049 bits (2712), Expect = 0.0
 Identities = 512/768 (66%), Positives = 613/768 (79%), Gaps = 12/768 (1%)
 Frame = +2

Query: 5    FIKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHA 184
            +IK LRSD G EY S++F  FCE+EG+ RQLTV YTPQQNGV ERKNQTVMEMAK+ML+ 
Sbjct: 654  YIKTLRSDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYE 713

Query: 185  KGLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKE 364
            KGLPK FWAEAV TAVYLLNRCPTKA+++KTP+EAWSGRKPSV+H ++FG +CY+Q+PK+
Sbjct: 714  KGLPKIFWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQ 773

Query: 365  KRQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGAS 544
            +R KLDETS KCIF+GYSS SKGYRLYNLKT  ++ SRDVIFDE  +WNWE  +I K   
Sbjct: 774  RRSKLDETSEKCIFMGYSSQSKGYRLYNLKTXKLIISRDVIFDEKVAWNWEEGKILKKTI 833

Query: 545  FFDEKKQHSAFEH-----QEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVY 709
              DE +  +  E                                     P K+RSL+DVY
Sbjct: 834  LVDELQTKAPVETGNGSTSTSSPQESPRSVPLSPSIESPTSXSSSPSSTPRKMRSLTDVY 893

Query: 710  ARCNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVK 889
             RCN C++EP++F+EAIK+E WR+AM++EIDVIEKN+TW+LVE+P +KE++GVKWI++VK
Sbjct: 894  ERCNLCIVEPQSFEEAIKDEDWRKAMEKEIDVIEKNETWQLVEKPKDKEIIGVKWIFRVK 953

Query: 890  ------VNEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFL 1051
                   + DG  QR KARLVAKGY+QQPG DF ETFAPV+RLDTIR +IA AAQ+GW L
Sbjct: 954  WIFRXKYHSDGRVQRLKARLVAKGYSQQPGXDFHETFAPVARLDTIRTIIAVAAQKGWLL 1013

Query: 1052 YQLDVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYF 1231
            YQLD+KSAFLNG+L  EIYVEQPQGFV+ GEE+KVY+LKKALYGL+QA RAWY+QIDSYF
Sbjct: 1014 YQLDIKSAFLNGKLEXEIYVEQPQGFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYF 1073

Query: 1232 TFHDFKRSKSESTLYVKTQGKSS-LIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDM 1408
              + F RSKSE TLYVK++  S  LIVALYVDDL+F GNDE M+ +F+NEMMK+YEMSDM
Sbjct: 1074 IENGFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDM 1133

Query: 1409 GLIHHFLGMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRV 1588
            GL+H+FLG+E+YQE DGVFICQKRY E+ILK+FGM+ CN  S PLVVNEKL+K+DG K V
Sbjct: 1134 GLLHYFLGIEVYQEEDGVFICQKRYVEHILKKFGMAGCNXVSTPLVVNEKLRKEDGGKMV 1193

Query: 1589 DATLYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIK 1768
            D T +RSL+GNLLYLT+TRPDIMFA+SLLSRFM+ PS  H GAAKRVLRY++GT   GIK
Sbjct: 1194 DETHFRSLVGNLLYLTATRPDIMFAASLLSRFMHYPSHLHLGAAKRVLRYLQGTVELGIK 1253

Query: 1769 YWRGAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVS 1948
            Y+R  +V+L G+CDSDW G +DDMKSTSGY FSLGS V SW SKKQ SVAQSSAEAEY+S
Sbjct: 1254 YFRNIEVKLIGHCDSDWGGCIDDMKSTSGYAFSLGSGVISWVSKKQGSVAQSSAEAEYIS 1313

Query: 1949 AALATSQVIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIRE 2128
            A+LATSQ IW+R+ILEDI  KQ  AT L CDNKSAIA++KN VFHSRTRHI++KYHFI+E
Sbjct: 1314 ASLATSQAIWLRRILEDIKEKQNEATYLLCDNKSAIAIAKNXVFHSRTRHIAVKYHFIKE 1373

Query: 2129 AIESGEVQLTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGE 2272
             I  GEVQL +CKSE+Q ADIFTKALP  K +  R+LLGV + HI+GE
Sbjct: 1374 VISDGEVQLMYCKSEEQXADIFTKALPLEKLVHFRKLLGVEELHIRGE 1421


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  885 bits (2288), Expect = 0.0
 Identities = 435/773 (56%), Positives = 571/773 (73%), Gaps = 23/773 (2%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            IKVLRSD G EY S EF K+CE  GI RQLT  Y+ QQNGV+ERKN+T+ +MA SML  K
Sbjct: 370  IKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSTQQNGVAERKNRTINDMANSMLQDK 429

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
            G+PK+FWAEAV TA+Y+LNR PTKAV ++TP EAW G+KP + H+R+FG +CYAQ+P +K
Sbjct: 430  GMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQK 489

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R K D  S +CIFVGY+   KGYRLYNL+ + I+  RDVIFDE+A+WNW++ E       
Sbjct: 490  RVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIIIRDVIFDESATWNWKSPEASSTPLL 549

Query: 548  ------FDEKKQHSAFEHQEDMEMNQ-----ETDFXXXXXXXXXXXXXXXXXXXPPKLRS 694
                    +   H   E ++     Q      +                     P ++RS
Sbjct: 550  PTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRS 609

Query: 695  L------------SDVYARCNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVE 838
            +            S+ +  CN+ ++EP++F EA K + W +AM++EI +IEKN TWELV+
Sbjct: 610  MVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVD 669

Query: 839  RPINKEVVGVKWIYKVKVNEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRML 1018
            RP ++EV+GVKW+YK K+N DGS Q+ KARLVAKG+ Q+PGID+ ET+APV+RL+TIR +
Sbjct: 670  RPRDREVIGVKWVYKTKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTI 729

Query: 1019 IAFAAQQGWFLYQLDVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQAS 1198
            IA AAQ+ W +YQLDVKSAFLNG L+EEIYVEQP+GF ++G E+KV+RLKKALYGL+QA 
Sbjct: 730  IALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAP 789

Query: 1199 RAWYSQIDSYFTFHDFKRSKSESTLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNE 1378
            R WYSQID YF    F +S SE TLYV   G   LIV+LYVDDL++ GN E M+ +FK +
Sbjct: 790  RVWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSEKMMQDFKKD 849

Query: 1379 MMKRYEMSDMGLIHHFLGMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEK 1558
            MM  YEMSD+GL+++FLGME++Q  +G+FI Q++YAENILK+F M +C   + PL+ NEK
Sbjct: 850  MMHTYEMSDLGLLYYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEK 909

Query: 1559 LKKDDGEKRVDATLYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRY 1738
             K  DG  +VD T+YRSL+G+LLYLT+TRPDIMFA+SLLSR+M+SPSQ +F AAKRVLRY
Sbjct: 910  QKARDGADKVDPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRY 969

Query: 1739 IKGTTNFGIKYWRGAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVA 1918
            IKGT ++GI Y    + +L GY DSDWAG LDDMK TSGY FSLGS + SW++KKQ+ VA
Sbjct: 970  IKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGSGMCSWSTKKQNIVA 1029

Query: 1919 QSSAEAEYVSAALATSQVIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRH 2098
             SSAEAEYV+A+ A SQV+W+R+I+ED+G KQ   T ++CD+KSAIA+S+NPV H RT+H
Sbjct: 1030 LSSAEAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKH 1089

Query: 2099 ISIKYHFIREAIESGEVQLTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQ 2257
            I+IKYH+IREA++  EV+L FC++++Q+ADIFTKAL K KF++ REL+GV ++
Sbjct: 1090 IAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDRELIGVCKK 1142


>gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 703

 Score =  865 bits (2234), Expect = 0.0
 Identities = 418/708 (59%), Positives = 538/708 (75%), Gaps = 2/708 (0%)
 Frame = +2

Query: 155  MEMAKSMLHAKGLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFG 334
            MEMA+SML  KGLP TFWAEAVYTAVYLLNR PTKAV DKTP+EAWSG+KPS KHLRIFG
Sbjct: 1    MEMARSMLKEKGLPNTFWAEAVYTAVYLLNRRPTKAVRDKTPIEAWSGKKPSAKHLRIFG 60

Query: 335  SVCYAQIPKEKRQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNW 514
            S+CY  +P EKR KL++ + + IF+GY S SKGYR+YNL+T+ +  SRD+  DENA+WNW
Sbjct: 61   SICYIHVPDEKRHKLEDKTVRGIFLGYISQSKGYRVYNLQTKKLTISRDIEVDENATWNW 120

Query: 515  ETSEIEKGASFF--DEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKL 688
            E   IEK   +   ++    S  ++ +D+ ++ E+                     P ++
Sbjct: 121  EEERIEKKTIYMPINQPTTSSLEDNNQDIVISPESSIIVPLQEESSPEST------PRRV 174

Query: 689  RSLSDVYARCNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGV 868
            RSL D+Y   N  ++EP +F+EA  +E W +AM+EEI +IEKN TWELV+ P  K+++GV
Sbjct: 175  RSLVDIYETYNLAILEPGSFEEATNQEVWVKAMEEEIKMIEKNNTWELVDCPHGKDIIGV 234

Query: 869  KWIYKVKVNEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWF 1048
            KW+YK K+N DG+ Q++KARLVAKGY QQPG+D+ ETFAPV+RL+TIR LIA AA +GW 
Sbjct: 235  KWVYKTKLNLDGTIQKHKARLVAKGYLQQPGVDYNETFAPVARLETIRALIALAAHKGWN 294

Query: 1049 LYQLDVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSY 1228
            +YQL+VKSAFLNG L EEIYVEQP GFV+KG E KV RLKKA YGL+QA RAWY +ID Y
Sbjct: 295  IYQLNVKSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRLKKASYGLKQAPRAWYRKIDQY 354

Query: 1229 FTFHDFKRSKSESTLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDM 1408
            FT H F+RSKSE TLY+KTQG+ +L+++LYVDDL++ G + NM+ EFK +MMK +EM+D+
Sbjct: 355  FTDHGFRRSKSEPTLYIKTQGQHTLLLSLYVDDLIYTGTNTNMMMEFKKDMMKTFEMTDL 414

Query: 1409 GLIHHFLGMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRV 1588
            GL+ +FLG+E+ Q +DG+FI +K+Y E +LK+F M  C P S PLV NEKL+K DG    
Sbjct: 415  GLMSYFLGIEVSQRNDGIFILKKKYTEALLKKFNMYGCKPVSTPLVTNEKLQKVDGAPEA 474

Query: 1589 DATLYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIK 1768
            DA+ YRSL+G+LLYLT+ RPDIMFA+SLLSRFM  PSQ H+G  KR+LRY++GT  FGI 
Sbjct: 475  DASQYRSLVGSLLYLTAIRPDIMFATSLLSRFMQKPSQIHYGTGKRILRYLQGTREFGIW 534

Query: 1769 YWRGAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVS 1948
            Y    + R+ GY DSDWAGS+DDMKSTSGY FSLGS  FSWASKKQ +VAQS+ EAEY++
Sbjct: 535  YKTMTKSRMIGYTDSDWAGSIDDMKSTSGYAFSLGSRFFSWASKKQPTVAQSTVEAEYIA 594

Query: 1949 AALATSQVIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIRE 2128
            AA  TSQ IW+R+ILE++  +Q   T ++CDNKSAI M+KNPV H RT+HI+IKYHFIRE
Sbjct: 595  AAETTSQAIWLRRILEEMSEQQDGPTIIYCDNKSAITMAKNPVHHQRTKHIAIKYHFIRE 654

Query: 2129 AIESGEVQLTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGE 2272
            A  + ++QL +  +EDQVA+IFTKALP+ KF ++R +LG+ +  IK E
Sbjct: 655  AETTKQIQLEYYSTEDQVAEIFTKALPRAKFEQLRTMLGITEICIKEE 702


>gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  855 bits (2210), Expect = 0.0
 Identities = 412/707 (58%), Positives = 535/707 (75%), Gaps = 1/707 (0%)
 Frame = +2

Query: 155  MEMAKSMLHAKGLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFG 334
            MEMA+SML  KGLP TFWAEAVYTAVY+LNRCPTKA+ DKT +EAWSG KPS KHLR+FG
Sbjct: 1    MEMARSMLKEKGLPNTFWAEAVYTAVYILNRCPTKAIKDKTSIEAWSGIKPSAKHLRVFG 60

Query: 335  SVCYAQIPKEKRQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNW 514
            S+CY  +P+EKR KL++ + + IF+GYS+ SKGY++YNL+T+ +     +I DEN +WNW
Sbjct: 61   SICYIHVPEEKRHKLEDKTVRGIFLGYSTQSKGYQVYNLQTKKL-----IISDENVAWNW 115

Query: 515  ETSEIEKGASFFDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRS 694
               ++EK               H    +  +ET                     P ++RS
Sbjct: 116  NDEKVEKNI-------------HISIQQPEEETTEVPGELHSPPQQQTPSPKSTPRRVRS 162

Query: 695  LSDVYARCNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKW 874
            L D+Y  CN  ++EPE+F+ A K++ W +AM+EEI +IEKN TW+LV+ P +K+++GVKW
Sbjct: 163  LEDIYETCNLAILEPESFEAASKQQVWVKAMEEEIKMIEKNNTWDLVDYPKDKDIIGVKW 222

Query: 875  IYKVKVNEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLY 1054
            +YK K+N DG+ Q++KARLVAKGY+QQPG+D+ ETFAPV+RLDTIR LIA AA++GW ++
Sbjct: 223  VYKTKLNPDGTIQKHKARLVAKGYSQQPGVDYNETFAPVARLDTIRALIALAAEKGWNIF 282

Query: 1055 QLDVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFT 1234
            QLDVKSAFLNG L EEIYVEQPQGF+ KG EDKV RL+KALYGL+QA RAWYS+ID YFT
Sbjct: 283  QLDVKSAFLNGVLQEEIYVEQPQGFISKGNEDKVLRLRKALYGLKQAPRAWYSRIDQYFT 342

Query: 1235 FHDFKRSKSESTLYVKTQGK-SSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMG 1411
             H F+RSKSE TLY+KTQG+  +LIV+LYVDDL++ GN+  M+ EFK +MMK +EM+D+G
Sbjct: 343  DHGFRRSKSEPTLYIKTQGQYDTLIVSLYVDDLIYTGNNMKMMTEFKEDMMKTFEMTDLG 402

Query: 1412 LIHHFLGMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVD 1591
            L+++FLG+E+ Q+  G+FICQK+Y E +LK+F MS C   + PLV  EKL+KDDG    D
Sbjct: 403  LMNYFLGIEVSQKKKGIFICQKKYTEALLKKFKMSGCKTVTTPLVTKEKLQKDDGAPDAD 462

Query: 1592 ATLYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKY 1771
            A+ YRSLIG+LLYLT+TRPDI +A SLLSRFM  PSQ HFGAAKR+LRY++GT  FGI Y
Sbjct: 463  ASRYRSLIGSLLYLTATRPDITYAVSLLSRFMQKPSQIHFGAAKRILRYLQGTKEFGIWY 522

Query: 1772 WRGAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSA 1951
                   L GY D D AGS+DDMKSTSGY FSLGS +FSWASKK  +VAQS+AEAEYV+A
Sbjct: 523  KTMTNSSLLGYTDCDLAGSVDDMKSTSGYAFSLGSGIFSWASKKHATVAQSTAEAEYVAA 582

Query: 1952 ALATSQVIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREA 2131
            A ATSQ IW+R+IL ++  +Q   T ++CDNKS IAM+KNP  HSRT+HI+IKYHFI+E 
Sbjct: 583  AEATSQAIWLRRILAEMREQQDGPTTIYCDNKSTIAMTKNPKHHSRTKHIAIKYHFIKEV 642

Query: 2132 IESGEVQLTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGE 2272
              + ++++ +CK+E+QVAD+FTKALP+ +F + R ++GV +  IK E
Sbjct: 643  ETTKKIKMEYCKTEEQVADVFTKALPRTRFEQFRTMIGVKEICIKEE 689


>gb|KYP61490.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  874 bits (2258), Expect = 0.0
 Identities = 435/756 (57%), Positives = 560/756 (74%), Gaps = 1/756 (0%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            +K LRSDNG EY + EF KFCE+ GI  QLTV YTPQQNGVSERKN+TVMEMA+ +L  K
Sbjct: 518  VKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEK 577

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
            GLPKTFWAEAV T+VYLLN  PTKA+   TP EAW GR PSV+HL++FG VCYA +P+ K
Sbjct: 578  GLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVK 637

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLD+ S   IF+GYSS SKGYR+YN  T+ I+ SR+V FDE + WNWE S+ E     
Sbjct: 638  RDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEAS--- 694

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARCNFC 727
               K+Q      QE    ++E +                        R L+++Y RCN  
Sbjct: 695  --NKRQLEVDNLQEQNSESEEQNLDDDDFPVRGT-------------RDLAEIYERCNVA 739

Query: 728  MIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDGS 907
             +EP+ + EA + E WR AMQEE+++IEKN TW+LV+RPIN++V+G+KW+Y+ K+N DGS
Sbjct: 740  ALEPKEYAEAAELEGWRVAMQEEMNMIEKNNTWQLVDRPINQKVIGLKWVYRTKLNYDGS 799

Query: 908  FQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLNG 1087
              + KARLV KGY QQ G+DF +TFAPV+R DTIRML+A AA+ GW +Y  DVKSAFLNG
Sbjct: 800  VNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNG 859

Query: 1088 ELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSES 1267
             L E+IYV+QP+GF +KG E+KVY+L KALYGL+QA RAWY++ID+Y     F+RS++E+
Sbjct: 860  FLEEDIYVDQPEGFQVKGSENKVYKLHKALYGLKQAPRAWYTRIDNYLLQKGFERSENEA 919

Query: 1268 TLYVK-TQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEIY 1444
            TLYVK +Q +  LI++LYVDD+L  G+D + + +FK++M   +EMSD+G +++FLGMEIY
Sbjct: 920  TLYVKRSQNEVKLIISLYVDDMLVIGSDFDSLRQFKHDMENEFEMSDLGQMNYFLGMEIY 979

Query: 1445 QESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGNL 1624
            Q   G+FI Q++Y   ILK+F M  C P   PLV+NEKL  +D   +VDA+LYRSLIG+L
Sbjct: 980  QCDAGIFISQRKYVLEILKKFHMEKCKPVDTPLVINEKLSLNDAIAKVDASLYRSLIGSL 1039

Query: 1625 LYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRLEGY 1804
            LYL++TRPDIMFA+SLLSRFM+SPSQAH+GAAKRVLRY+KGTT++G+ + +     L+GY
Sbjct: 1040 LYLSATRPDIMFAASLLSRFMHSPSQAHYGAAKRVLRYLKGTTDYGLWFLQNESGELQGY 1099

Query: 1805 CDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWIR 1984
             DSDWAGS+DD KSTSGY FS GS VF+W SKKQ+ VAQSSAEAEY+SAA A +  IW+R
Sbjct: 1100 ADSDWAGSIDDSKSTSGYVFSFGSGVFTWNSKKQEVVAQSSAEAEYISAAAAANHAIWLR 1159

Query: 1985 KILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQLTFC 2164
            KIL D+   Q  AT ++ DNKSAIA++KNPV + RT+HI +KYH IREA +S EV L  C
Sbjct: 1160 KILCDVKQHQNEATIIWVDNKSAIAIAKNPVQYGRTKHIKVKYHAIREAEKSKEVSLKHC 1219

Query: 2165 KSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGE 2272
             SE+Q+ADI TKAL K+KF  +R  LGV ++++K E
Sbjct: 1220 SSENQIADIMTKALSKSKFEMLRSKLGVCKKNLKEE 1255


>gb|KYP46287.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 715

 Score =  842 bits (2174), Expect = 0.0
 Identities = 420/732 (57%), Positives = 542/732 (74%), Gaps = 1/732 (0%)
 Frame = +2

Query: 80   GIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAKGLPKTFWAEAVYTAVYLLNRCPTK 259
            GI  QLTV YTPQQNGVSERKN+TVMEMA+ +L  KGLPKTFWAEAV T+VYLLN  PTK
Sbjct: 1    GIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTK 60

Query: 260  AVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEKRQKLDETSAKCIFVGYSSLSKGYR 439
            A+   TP EAW GR PSV+HL++FG VCYA +P+ KR KLD+ S   IF+GYSS SKGYR
Sbjct: 61   ALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYR 120

Query: 440  LYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASFFDEKKQHSAFEHQEDMEMNQETDF 619
            +YN  T+ I+ SR+V FDE + WNWE S+ E        K+Q      QE    ++E + 
Sbjct: 121  IYNPATKKILVSRNVKFDELSRWNWEKSKAEAS-----NKRQLEVDNLQEQNSESEEQNL 175

Query: 620  XXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARCNFCMIEPENFDEAIKEEAWREAMQEEI 799
                                   R L+++Y RCN   +EP+ + EA + E WR AMQEE+
Sbjct: 176  DDDDFPVRGT-------------RDLAEIYERCNVAALEPKEYAEAAELEGWRVAMQEEM 222

Query: 800  DVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDGSFQRNKARLVAKGYTQQPGIDFQET 979
            ++IEKN TW+LV+RPIN++V+G+KW+Y+ K+N DGS  + KARLV KGY QQ G+DF +T
Sbjct: 223  NMIEKNNTWQLVDRPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDT 282

Query: 980  FAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVY 1159
            FAPV+R DTIRML+A AA+ GW +Y  DVKSAFLNG L E+IYV+QP+GF +KG E+KVY
Sbjct: 283  FAPVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSENKVY 342

Query: 1160 RLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSESTLYVK-TQGKSSLIVALYVDDLLF 1336
            +L KALYGL+QA RAWY++ID+Y     F+RS++E+TLYVK +Q +  LI++LYVDD+L 
Sbjct: 343  KLHKALYGLKQAPRAWYTRIDNYLLQKGFERSENEATLYVKRSQNEVKLIISLYVDDMLV 402

Query: 1337 CGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEIYQESDGVFICQKRYAENILKRFGMS 1516
             G+D + + +FK++M   +EMSD+G +++FLGMEIYQ   G+FI Q++Y   ILK+F M 
Sbjct: 403  IGSDFDSLRQFKHDMENEFEMSDLGQMNYFLGMEIYQCDAGIFISQRKYVLEILKKFHME 462

Query: 1517 DCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSP 1696
             C P   PLV+NEKL  +D   +VDA+LYRSLIG+LLYL++TRPDIMFA+SLLSRFM+SP
Sbjct: 463  KCKPVDTPLVINEKLSLNDAIAKVDASLYRSLIGSLLYLSATRPDIMFAASLLSRFMHSP 522

Query: 1697 SQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGS 1876
            SQAH+GAAKRVLRY+KGTT++G+ + +     L+GY DSDWAGS+DD KSTSGY FS GS
Sbjct: 523  SQAHYGAAKRVLRYLKGTTDYGLWFLQNESGELQGYADSDWAGSIDDSKSTSGYVFSFGS 582

Query: 1877 SVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWIRKILEDIGMKQGAATELFCDNKSAI 2056
             VF+W SKKQ+ VAQSSAEAEY+SAA A +  IW+RKIL D+   Q  AT ++ DNKSAI
Sbjct: 583  GVFTWNSKKQEVVAQSSAEAEYISAAAAANHAIWLRKILCDVKQHQNEATIIWVDNKSAI 642

Query: 2057 AMSKNPVFHSRTRHISIKYHFIREAIESGEVQLTFCKSEDQVADIFTKALPKNKFLKMRE 2236
            A++KNPV + RT+HI +KYH IREA +S EV L  C SE+Q+ADI TKAL K+KF  +R 
Sbjct: 643  AIAKNPVQYGRTKHIKVKYHAIREAEKSKEVSLKHCSSENQIADIMTKALSKSKFEMLRS 702

Query: 2237 LLGVVQQHIKGE 2272
             LGV ++++K E
Sbjct: 703  KLGVCKKNLKEE 714


>ref|XP_008337255.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Malus domestica]
          Length = 1750

 Score =  875 bits (2261), Expect = 0.0
 Identities = 414/760 (54%), Positives = 563/760 (74%), Gaps = 11/760 (1%)
 Frame = +2

Query: 11   KVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAKG 190
            K LRSD G E+ S+EF KFCE EGI RQLT+ YTPQQNGV ERKN+TV+EMAK+MLH +G
Sbjct: 615  KSLRSDRGGEFLSSEFTKFCETEGIQRQLTMAYTPQQNGVVERKNRTVVEMAKTMLHDRG 674

Query: 191  LPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEKR 370
            +P   WAEAV+TAVY+LNRCPT A+ + TP EA+SGRKP + HL+IFGS+CY  +P E R
Sbjct: 675  MPYVLWAEAVHTAVYILNRCPTMALGNMTPFEAYSGRKPGIAHLKIFGSLCYVHVPTETR 734

Query: 371  QKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNW-ETSEIEKGASF 547
            QKLD  S K +FVGY++  KGYR+++  T  ++ SRDV+FDE+ +WNW E  +    A++
Sbjct: 735  QKLDAKSIKGVFVGYATCEKGYRIFBPCTNKLILSRDVVFDESMTWNWKENPQSSAAATY 794

Query: 548  FDEKKQHSAFEHQEDMEMNQETDF---------XXXXXXXXXXXXXXXXXXXPPKLRSLS 700
              ++ ++    +  +M + + +                              P K R+L 
Sbjct: 795  IQDQPENVVGMNPYEMSVIEGSSLSPSSPFHIQEQESCTPESAKLSEDYDHTPLKWRNLD 854

Query: 701  DVYARCNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIY 880
            D++A+CN C++EPE ++EA ++E+W  AMQ+E+ +IEKN TWELV+RP  + V+GVKW+Y
Sbjct: 855  DIFAQCNLCVMEPERYEEAAQDESWLRAMQDELTMIEKNGTWELVDRPTMQPVIGVKWVY 914

Query: 881  KVKVNEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQL 1060
            K K+N DG+  +NKARLVAKGY Q+PG D+ ET+APV+RLDTIR LIA AAQ+ W LYQL
Sbjct: 915  KTKLNLDGTVLKNKARLVAKGYAQKPGFDYNETYAPVARLDTIRTLIALAAQKSWRLYQL 974

Query: 1061 DVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFH 1240
            DVKSAFLNG L EE+YV+QP+GF ++G+EDKVYRL KALYGL+QA RAWY +ID+YF+  
Sbjct: 975  DVKSAFLNGVLQEEVYVDQPEGFTVQGKEDKVYRLHKALYGLKQAPRAWYGEIDAYFSQC 1034

Query: 1241 DFKRSKSESTLYVKTQG-KSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLI 1417
             F++S SE TLY+K++G K  +IV++YVDD+++ G+ + M+ EFK +MM +YEM+D+GL+
Sbjct: 1035 GFQKSLSEPTLYIKSRGEKDIIIVSIYVDDIVYTGSSKEMLEEFKEDMMMKYEMTDLGLL 1094

Query: 1418 HHFLGMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDAT 1597
            HHFLGM + Q +  +FI QK+YA ++L +FG+++C   S PL+  EKL KDDG    +  
Sbjct: 1095 HHFLGMGVIQTNFSIFIHQKKYASSLLNKFGLNECKSVSTPLISAEKLSKDDGSGPANEE 1154

Query: 1598 LYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWR 1777
             YR ++G+LLYLT+TRPDIM+A+SLLSRFM+SP+  H+G AKRVLRYIKGT ++G++Y +
Sbjct: 1155 QYRKIVGSLLYLTATRPDIMYAASLLSRFMHSPTNKHYGTAKRVLRYIKGTLDYGLEYVK 1214

Query: 1778 GAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAAL 1957
            G    L G+CDSDW GS+DD KSTSGY FS GS VFSWAS KQ+ VA S+AEAEY+SA+ 
Sbjct: 1215 GKNAMLIGFCDSDWGGSVDDSKSTSGYAFSFGSGVFSWASVKQNCVALSTAEAEYISASE 1274

Query: 1958 ATSQVIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIE 2137
            AT Q IW+R +LED G  Q  AT + CDN +AIA++KNPVFH +T+HI  +YHFI+ A++
Sbjct: 1275 ATVQAIWLRFVLEDFGEMQTEATPVHCDNTAAIAITKNPVFHQKTKHIDRRYHFIKNALQ 1334

Query: 2138 SGEVQLTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQ 2257
             G + L +C + +QVADIFTKAL K++F  +R++L  + Q
Sbjct: 1335 EGIIDLVYCPTNEQVADIFTKALSKDRFNYLRDMLAFLLQ 1374


>ref|XP_008359946.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103423634
            [Malus domestica]
          Length = 1756

 Score =  867 bits (2239), Expect = 0.0
 Identities = 424/748 (56%), Positives = 556/748 (74%), Gaps = 1/748 (0%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            +K L SD G E  S EF+++C  +GI RQLT+ YTPQQNGVS RKN  V+ MAKSMLH K
Sbjct: 293  VKCLMSDRGGECLSAEFDRYCNGQGIQRQLTMAYTPQQNGVSXRKNXXVVXMAKSMLHEK 352

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LP  FWAEAV T VYL+NRCPTK +   T  EA+ GRKP + HL+IFGS+CY  IP   
Sbjct: 353  NLPYAFWAEAVNTXVYLINRCPTKXLKKSTXFEAYXGRKPGIAHLKIFGSLCYVHIPSNL 412

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
              KL+E S KCIFVGY S  KGY L    +R I+ SRDV FDEN S +W  + I+ G +F
Sbjct: 413  XHKLEENSHKCIFVGYGSSEKGYXLXXPISRKIVLSRDVTFDENKSXDWNCN-IBTGXTF 471

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARCNFC 727
                +  +A E  E ++ N + +                    P K RS++++ A+CN C
Sbjct: 472  XVITEHKNATEICE-IDENSQFEXYXVSQXENVSERSSTYDDTPKKWRSINEIMAQCNMC 530

Query: 728  MIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDGS 907
            +IEPE++++A K+++WR AM+ E+D+IEKN TW+LVERP +K V+GVKW+YK K+N DG+
Sbjct: 531  VIEPESYEDAXKDDSWRSAMKXELDMIEKNNTWQLVERPYDKPVIGVKWVYKTKLNLDGT 590

Query: 908  FQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLNG 1087
             Q+NKARLVAKGY+Q+PGID+ ETFAPV+ LDTIR LIA AAQ+ W LYQLDVKSAFLN 
Sbjct: 591  VQKNKARLVAKGYSQKPGIDYNETFAPVAXLDTIRTLIALAAQKKWNLYQLDVKSAFLNX 650

Query: 1088 ELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSES 1267
             L EE+YVEQPQGFV + EE KVY+L KALYGL+QA RAWY +I++YF    F++S SE+
Sbjct: 651  VLKEEVYVEQPQGFVKESEETKVYKLNKALYGLKQAPRAWYDEINAYFNSARFEKSSSEA 710

Query: 1268 TLYVKTQGKSSLI-VALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEIY 1444
            TLYVKT   S +I V+LYVDD+++ G+   M+ EF+N+MMK Y M+D+GL+HHFLGM + 
Sbjct: 711  TLYVKTSKDSGIIIVSLYVDDIVYTGSSPQMLEEFRNDMMKHYGMTDLGLLHHFLGMGVL 770

Query: 1445 QESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGNL 1624
            Q  + +FI QK+YA+ ++++FG+ +C   + PL +NE+L K DG +  D   YR L+ ++
Sbjct: 771  QTENSIFIHQKKYAQKLIEKFGLKECKSVATPLPMNERLNKVDGSEAADEGEYRQLVRSM 830

Query: 1625 LYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRLEGY 1804
            LYLT+ RPD+MFA+SLL+RFM++P++ H G AKRVLRYI+GT +FGI + RG    L GY
Sbjct: 831  LYLTAIRPDVMFAASLLARFMHNPTKKHMGTAKRVLRYIQGTIDFGIVFERGKATTLIGY 890

Query: 1805 CDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWIR 1984
            CDSDWAGS DDM+STSGY F+LGS +FSWAS KQ+++A S+AEAEYVSAA  TSQ  W+R
Sbjct: 891  CDSDWAGSEDDMRSTSGYAFTLGSGMFSWASIKQNTMALSTAEAEYVSAAEVTSQAKWLR 950

Query: 1985 KILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQLTFC 2164
             +LED G +Q   T + CDN SAIAM+KNPVFH +TRHI+ K+HFIREAI++ E++L FC
Sbjct: 951  FVLEDFGEEQVEGTHILCDNTSAIAMAKNPVFHQKTRHINKKFHFIREAIQAKEIELVFC 1010

Query: 2165 KSEDQVADIFTKALPKNKFLKMRELLGV 2248
            ++E+Q+ADI TKALPK++F+ +RELLGV
Sbjct: 1011 RTEEQIADILTKALPKDRFVYLRELLGV 1038


>gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1262

 Score =  848 bits (2191), Expect = 0.0
 Identities = 414/757 (54%), Positives = 556/757 (73%), Gaps = 2/757 (0%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            +K LR+DNGKEY S EFN FC++ G+  QLTV Y+PQQNGV+ERKN++V+EMA+ M+  K
Sbjct: 530  LKKLRTDNGKEYTSTEFNIFCDDLGVEHQLTVSYSPQQNGVAERKNRSVLEMARCMIFEK 589

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LPK+FWAEA+ TAVYL NR PT+A+   TP+EAW G KPSV+HL++FGS+CY  +P  K
Sbjct: 590  KLPKSFWAEAINTAVYLQNRLPTRAIKGMTPVEAWGGIKPSVRHLKVFGSLCYTHVPAVK 649

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLDE + + I +GYSS SKGY++Y + +  +  SRD+  DE+A WNWET ++E+    
Sbjct: 650  RSKLDERAERGILIGYSSKSKGYKVYGIDSGKVSVSRDIKVDEDAYWNWETCQMERHLVL 709

Query: 548  FDEKKQHSAFEHQ-EDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARCNF 724
                     FE   ED E + + DF                       R LS++Y RCN 
Sbjct: 710  -------PTFESTIEDQEEDIDDDFAIRGT------------------RHLSEIYQRCNV 744

Query: 725  CMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDG 904
             ++EP NF+EA K + W +AM+EE+  IE NKTW+LV++P +K V+GVKW+Y+ K+N D 
Sbjct: 745  VVLEPTNFEEASKVDEWNQAMKEEMTTIEDNKTWQLVDKPKDKNVIGVKWVYRTKLNPDR 804

Query: 905  SFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLN 1084
            S  + KA LV KGY QQPGID+ ETFAPV+R+DTIR+L+A AAQ  W ++ LDVKSAFLN
Sbjct: 805  SINKYKAILVVKGYVQQPGIDYTETFAPVARMDTIRILLALAAQMKWEIWHLDVKSAFLN 864

Query: 1085 GELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSE 1264
            G L EEIYV QP+GFV+KG+EDKVY+L KALYGL+QA RAWYS+IDSYF    F+RS+++
Sbjct: 865  GNLVEEIYVAQPEGFVVKGDEDKVYKLHKALYGLKQAPRAWYSRIDSYFCSQGFRRSEND 924

Query: 1265 STLYVKTQ-GKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEI 1441
            +TLYVK      SLI++LYVDDLL   N++  + +   EM  +++MS++G +++FLG+E+
Sbjct: 925  ATLYVKKLLDGGSLIISLYVDDLLVTSNNQQEVQQLMEEMQNQFKMSNLGKMNYFLGLEV 984

Query: 1442 YQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGN 1621
            +Q  DG+F+ Q++YA  +LK++ M  C     PLV N KL K+DG  +V+ +LYRSL+G+
Sbjct: 985  HQTKDGIFMNQEKYAHEVLKKYKMESCKFVPTPLVQNLKLSKEDGAGKVNVSLYRSLVGS 1044

Query: 1622 LLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRLEG 1801
            LLYLTS+RPD+M+A+SLLSRFM SPS+ HF A KRVLRY+KGTT FGI Y       L G
Sbjct: 1045 LLYLTSSRPDLMYAASLLSRFMQSPSEIHFAATKRVLRYLKGTTQFGIWYKPRKNGSLIG 1104

Query: 1802 YCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWI 1981
            Y DSDWAG++DDMKST+GY FSLGS +FSW SKKQ+ VAQS+AEAEYV+ A A +Q IW+
Sbjct: 1105 YVDSDWAGNIDDMKSTTGYVFSLGSGMFSWNSKKQEIVAQSTAEAEYVAGAAAANQAIWL 1164

Query: 1982 RKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQLTF 2161
            RKIL D+G +Q  ATE++CD+KSAIA+++NPV H +T+HI +K+H IREA+++ E++L  
Sbjct: 1165 RKILLDLGAEQLEATEIYCDSKSAIAIAENPVQHGKTKHIQVKFHVIREAVKNHEIKLIH 1224

Query: 2162 CKSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGE 2272
            C S+ QVADI TKALPK +F ++REL+GV  ++ K E
Sbjct: 1225 CCSDLQVADILTKALPKARFERLRELIGVSIKNFKEE 1261


>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
          Length = 894

 Score =  812 bits (2097), Expect = 0.0
 Identities = 397/757 (52%), Positives = 532/757 (70%), Gaps = 2/757 (0%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            IK+LRSDNG EY S++F +FC   GI  QLT  YTPQQNGVSERKN+TVMEMA+ +L  K
Sbjct: 153  IKILRSDNGTEYTSSQFVEFCSTAGIECQLTTPYTPQQNGVSERKNRTVMEMARCLLFEK 212

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             +P  FWAEAV T+VYLLNR PTK++ +KTP E W G KP V HL+IFGS+CY  +P+ K
Sbjct: 213  KMPSNFWAEAVNTSVYLLNRLPTKSLKNKTPYEEWYGVKPFVNHLKIFGSICYYHVPEPK 272

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLD  + K I +GY + +KGYR++ L+T  ++ SR+V  DE A+W+ +  +       
Sbjct: 273  RSKLDSRAQKGILIGYGTSTKGYRIFCLQTNKVVLSRNVKVDEMATWDCKNKKYA----- 327

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARCNFC 727
                        Q D++ N   DF                      +RSL D+Y RC+  
Sbjct: 328  ------------QSDVDFNNHEDFQTSKSVDDFPVRG---------IRSLEDIYQRCSLA 366

Query: 728  MIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDGS 907
            + EP ++ EA   EAWR AMQEE+ +I KN+TW+LVERP N +V+GVKW++K K+N DGS
Sbjct: 367  ITEPTSYVEAKDSEAWRRAMQEELKMINKNETWQLVERPKNHKVIGVKWVFKTKLNSDGS 426

Query: 908  FQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLNG 1087
              ++KA+LV KGY QQ G+D++ETFAPV+R DTIR+L   AAQ  W ++QLDVKSAFLNG
Sbjct: 427  ICKHKAKLVVKGYAQQYGVDYKETFAPVARYDTIRLLFVLAAQNSWHIHQLDVKSAFLNG 486

Query: 1088 ELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSES 1267
             +++EIYVEQP G V   +ED VY L+KALYGL+QA RAWY  +D + T   F RS+SE+
Sbjct: 487  FVDKEIYVEQPDGVVAPSKEDYVYLLRKALYGLKQAPRAWYETMDKHLTKLGFVRSQSEA 546

Query: 1268 TLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEIYQ 1447
            TLYVKT     LI++LYVDD+L  GN   +I  FK+EM K +EM+D+G + +FLGME+ Q
Sbjct: 547  TLYVKTNDVQLLIISLYVDDMLVTGNQPKLIQSFKDEMNKVFEMTDLGAMKYFLGMEVMQ 606

Query: 1448 ESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGNLL 1627
                +FICQ++YA ++LK+F M D  P S P+  NEKL KDDG ++++  LYRSLIG+LL
Sbjct: 607  SCSRIFICQQKYAMDMLKKFKMQDYKPVSTPMTTNEKLSKDDGSEKINEGLYRSLIGSLL 666

Query: 1628 YLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQ--VRLEG 1801
            YLT++RPDI+FA S+LSRFM+SPS+ HF AAKRVLRYIKGT + G+++ + A+  ++L G
Sbjct: 667  YLTASRPDILFAVSVLSRFMHSPSEKHFSAAKRVLRYIKGTIDLGVQFSKSAEDDLKLLG 726

Query: 1802 YCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWI 1981
            Y +SDW G +DD +STSGY FSLG   F+W+ KKQ++ AQS+ EAEY++AA A +Q +W+
Sbjct: 727  YSNSDWGGCVDDSRSTSGYLFSLGLGCFTWSLKKQETTAQSTVEAEYIAAASAINQALWL 786

Query: 1982 RKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQLTF 2161
            +KIL+D+G +Q  AT + CDN SA+++ KNPVFH RT+HI IKYHFIRE  +S EV L  
Sbjct: 787  KKILKDLGQEQVEATNIMCDNISAVSILKNPVFHGRTKHIKIKYHFIREVQQSNEVLLVH 846

Query: 2162 CKSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGE 2272
            C S++Q+ DIFTK LP  +F  +++ +GV     K E
Sbjct: 847  CSSDNQLVDIFTKPLPMERFEALKQKIGVCHPDAKEE 883


>gb|KYP55941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 723

 Score =  798 bits (2061), Expect = 0.0
 Identities = 388/712 (54%), Positives = 520/712 (73%), Gaps = 2/712 (0%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            +K LR+DNGKEY S EFN FC++ G+  QLTV Y+PQQNGV+ERKN++V+EMA+ M+  K
Sbjct: 32   LKKLRTDNGKEYTSTEFNIFCDDLGVEHQLTVSYSPQQNGVAERKNRSVLEMARCMIFEK 91

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LPK+FWAEA+ TAVYL NR PT+A+   TP+EAW G KPSV+HL++FGS+CY  +P  K
Sbjct: 92   KLPKSFWAEAINTAVYLQNRLPTRAIKGMTPVEAWGGIKPSVRHLKVFGSLCYTHVPAVK 151

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLDE + K I +GYSS SKGY++Y + +  +  SRD+  DE+A WNWET ++E+ +  
Sbjct: 152  RSKLDERAEKGILIGYSSKSKGYKVYGIDSGKVSVSRDIKVDEDAYWNWETCQMERHSVL 211

Query: 548  FDEKKQHSAFEHQ-EDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARCNF 724
                     FE   ED E + + DF                       R LS++Y RCN 
Sbjct: 212  -------PTFESTIEDQEEDIDDDFAIRGT------------------RRLSEIYQRCNV 246

Query: 725  CMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDG 904
             ++EP NF+EA K + W +AM+EE+  IE NKTW+LV++P +K V+GVKW+Y+ K+N D 
Sbjct: 247  VVLEPTNFEEASKVDEWNQAMKEEMTTIEDNKTWQLVDKPKDKNVIGVKWVYRTKLNPDR 306

Query: 905  SFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLN 1084
            S  + KA LV KGY QQPGID+ ETFAPV+R D I +L+A AAQ  W ++ +DVKSAFLN
Sbjct: 307  SINKYKAILVVKGYVQQPGIDYTETFAPVARRDPIHILLALAAQMKWEIWHVDVKSAFLN 366

Query: 1085 GELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSE 1264
            G L EEIYV QP+GFV+KG+EDKVY+L KALYGL+QA RAWYS+IDSYF    F+RS+++
Sbjct: 367  GNLVEEIYVAQPEGFVVKGDEDKVYKLHKALYGLKQAPRAWYSRIDSYFCNQGFRRSEND 426

Query: 1265 STLYVKTQ-GKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEI 1441
            +TLYVK      SLI++LYVDDLL   N++  + +   EM  +++MS++G +++FLG+E+
Sbjct: 427  TTLYVKKLLDGGSLIISLYVDDLLVTSNNQQEVQQLMEEMQNQFKMSNLGKMNYFLGLEV 486

Query: 1442 YQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGN 1621
            +Q  DG+F+ Q++YA  +LK++ M  C     PLV N KL K+DG ++V+ +LYRSL+G+
Sbjct: 487  HQTKDGIFMNQEKYAHEVLKKYKMESCKFVPTPLVQNLKLSKEDGAEKVNVSLYRSLVGS 546

Query: 1622 LLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRLEG 1801
            LLYLTS+RPD+M+A+SLLSRFM SPS+ HF A KRVLRY+KGTT FGI Y       L G
Sbjct: 547  LLYLTSSRPDLMYAASLLSRFMQSPSEIHFAATKRVLRYLKGTTQFGIWYKPRKNGSLIG 606

Query: 1802 YCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWI 1981
            Y DSDWAG++DDMKST GY FSLG  +FSW SKKQ+ VAQS+AEAEYV  A AT+Q IW+
Sbjct: 607  YVDSDWAGNIDDMKSTMGYIFSLGFGMFSWNSKKQEIVAQSTAEAEYVVGAAATNQAIWL 666

Query: 1982 RKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIE 2137
            R+IL D+G +Q  ATE++CD+KSAIA+++NPV H +T+HI +K+H IREA++
Sbjct: 667  RRILLDLGAEQLEATEIYCDSKSAIAIAQNPVQHGKTKHIQVKFHVIREAVK 718


>gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1270

 Score =  810 bits (2092), Expect = 0.0
 Identities = 390/756 (51%), Positives = 542/756 (71%), Gaps = 1/756 (0%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            ++++RSDNG EY S +FNKFCE+ G+  QLT  Y+PQQNG +ERKN+T+MEMA+ +LH K
Sbjct: 536  MQMIRSDNGTEYTSKKFNKFCEDTGVEHQLTAPYSPQQNGTAERKNRTIMEMARCLLHDK 595

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LPK FWAEAV TAV+LLNR PTKA+  KTP EAW G KP + +L+IFG +C++ IP  K
Sbjct: 596  DLPKKFWAEAVNTAVFLLNRLPTKALQQKTPFEAWYGYKPELFNLKIFGCLCFSYIPHIK 655

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLD+ +   IFVGYS +SK YR+Y      ++ SRDV F E   W+W+ ++  +    
Sbjct: 656  RDKLDKKAEPGIFVGYSLISKAYRIYLPHKNKVIVSRDVKFLEFDCWSWKDNKFLEQIDC 715

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPK-LRSLSDVYARCNF 724
             D K  +     +E+ +++ E                      P +  R LSD+Y RCN 
Sbjct: 716  LDWKGNNELGLQEENEDVDDE----------------------PVRGTRLLSDIYQRCNV 753

Query: 725  CMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDG 904
             ++EP  ++EA  ++ W  AM+EE+ +IEKN+TW+LV+RP +K+ +GVKW+Y+ K N DG
Sbjct: 754  AVMEPGGYEEAATDKKWINAMEEELKMIEKNQTWQLVDRPSHKKAIGVKWVYRTKFNPDG 813

Query: 905  SFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLN 1084
            S  + KARLV KGY Q  G+DF ETFAPV+RLDTIR+L+A AAQ+GW ++QLDVKSAFLN
Sbjct: 814  SVNKYKARLVVKGYAQMFGVDFSETFAPVARLDTIRLLLALAAQKGWLIHQLDVKSAFLN 873

Query: 1085 GELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSE 1264
            G L EEI+VEQP+GF ++G+EDKVY LKKALYGL+QA R+WYS+ID++     F +S SE
Sbjct: 874  GYLEEEIFVEQPEGFALQGQEDKVYLLKKALYGLKQAPRSWYSRIDAHLMSLGFVKSLSE 933

Query: 1265 STLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEIY 1444
             TLY+K   +  L+++LYVDDL   GN + MI++FK EM   +EM+D+G +  FLGM++ 
Sbjct: 934  YTLYIKKVNEDILMISLYVDDLFVTGNCKEMIDKFKEEMENVFEMTDLGKMTFFLGMQVQ 993

Query: 1445 QESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGNL 1624
            Q+ + +F+CQ++YA+ +L +F M +C   + P+   EK  ++DG ++VD  L+RSLIG L
Sbjct: 994  QKKNEIFVCQEKYAKEVLMKFNMGECKSAATPMNQKEKFCREDGAEKVDEKLFRSLIGCL 1053

Query: 1625 LYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRLEGY 1804
            +YLT+TRPDIM + SLLSR+M+  S+ HF AAKR+LRY+KGT ++G+ + +   +   GY
Sbjct: 1054 MYLTATRPDIMHSVSLLSRYMHCASEIHFQAAKRILRYVKGTIDYGVWFKKVESLSFHGY 1113

Query: 1805 CDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWIR 1984
             DSDWAG +DDM+STSGY FSLGS VFSW SKKQ+ +AQS+AEAEYV+AA A +Q +WIR
Sbjct: 1114 SDSDWAGCVDDMRSTSGYCFSLGSGVFSWCSKKQEIIAQSTAEAEYVAAAAAVNQTVWIR 1173

Query: 1985 KILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQLTFC 2164
            KI+ D+ ++Q  +T++F DN++AI+++ NPVFH +T+H  IK  F+RE    G+V+L +C
Sbjct: 1174 KIMADLHIEQEDSTKIFVDNQAAISIANNPVFHGKTKHFKIKLFFLREVQREGQVKLVYC 1233

Query: 2165 KSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGE 2272
            KSEDQVADI TKALPK++F  +R+ LGV    +K E
Sbjct: 1234 KSEDQVADILTKALPKSRFEFLRQKLGVCSSKVKEE 1269


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  801 bits (2068), Expect = 0.0
 Identities = 394/753 (52%), Positives = 524/753 (69%), Gaps = 6/753 (0%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            +KVLR+D G E+ S +FN+FCE+EGI  +LT  YTP+QNGV+ERKN TV+EMA+SML  +
Sbjct: 402  VKVLRTDRGGEFTSTKFNQFCEKEGIHHELTTAYTPEQNGVAERKNTTVVEMARSMLKER 461

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LP  FWAE+V TAVYLLN  PTKAV+++TP EAW GRKP V HLR+FGSVCY+ I    
Sbjct: 462  NLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSVCYSLIDAHN 521

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R+KLDE S KCIF+GY S SKGYRLYN  +  I+ SR+V FDE A W W   +  +    
Sbjct: 522  RKKLDEKSEKCIFLGYCSQSKGYRLYNPVSGKIVESRNVTFDEEAVWTWREGDNGELVEI 581

Query: 548  F--DEKKQH-SAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPP-KLRSLSDVYAR 715
            F  DE++++ S      +   +                        PP K RSL ++Y  
Sbjct: 582  FVNDEQEENPSPANSATNTPASSAPSSPGPNNGNGSSDGEGSSSISPPQKFRSLREIYEE 641

Query: 716  CN-FCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKV 892
             + F   +P   +EA  +E WR+AM+EEI  IEKN+TW+LVE P  K  +GVKW++K K 
Sbjct: 642  QHAFFSADPVTVNEAATKEEWRKAMEEEIASIEKNQTWQLVELPEEKHSIGVKWVFKTKY 701

Query: 893  NEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKS 1072
              D + Q+ KARLV KGY Q+ G+D+++TF+PV+R DT+R L+A  A   W +YQ DVKS
Sbjct: 702  QADDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDTLRTLLALGAYMHWPIYQFDVKS 761

Query: 1073 AFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKR 1252
            AFLNGEL EE+YV+QP+GF+++G E  VYRL KALYGL+QA RAWY++IDSYF    F+R
Sbjct: 762  AFLNGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSYFAETGFER 821

Query: 1253 SKSESTLYVKTQGKSS-LIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFL 1429
            SKSE TLY+K QG    L+V LYVDD+++ G+  ++++EFK  MM+++EM+D+GL++ FL
Sbjct: 822  SKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFL 881

Query: 1430 GMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRS 1609
            G+E+ Q  DGVF+ Q +YA ++LKRF M+ CN    P+ VNEKL   DG ++ DAT +RS
Sbjct: 882  GLEVKQVEDGVFVSQHKYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRS 941

Query: 1610 LIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQV 1789
            L+G L+YLT TRPDI FA S +SRFM+ P++ HFGAAKR+LRYI  T  +G+ Y   ++ 
Sbjct: 942  LVGGLIYLTHTRPDICFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKF 1001

Query: 1790 RLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQ 1969
            +L G+ DSDWAG + D KSTSG+ F+LGS    W+SKKQ+  A SS+EAEY +A  A  Q
Sbjct: 1002 KLVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATAAACQ 1061

Query: 1970 VIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEV 2149
             +W+R+IL DI  +Q  AT +FCDNK+ IAM+KNP +H RT+HISIK HFIR+ +  G V
Sbjct: 1062 AVWLRRILADIKQEQEKATTIFCDNKATIAMNKNPAYHGRTKHISIKVHFIRDLVSEGSV 1121

Query: 2150 QLTFCKSEDQVADIFTKALPKNKFLKMRELLGV 2248
             L +C + +Q AD+ TKAL +NKF   R  LGV
Sbjct: 1122 TLEYCSTNEQSADVLTKALSRNKFDYFRSKLGV 1154


>emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
          Length = 1945

 Score =  824 bits (2129), Expect = 0.0
 Identities = 409/761 (53%), Positives = 542/761 (71%), Gaps = 5/761 (0%)
 Frame = +2

Query: 11   KVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAKG 190
            KVL +DNG EY S EFN FC+E GI  QLT  Y+PQQNGVSERKN+TVMEMA+ ML  K 
Sbjct: 657  KVLXTDNGGEYISKEFNVFCQEAGIVHQLTAPYSPQQNGVSERKNKTVMEMARCMLFEKK 716

Query: 191  LPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEKR 370
            LPK  WAEAV T+VYLLNR PTK+V  KTP++AWSG KPSVKHL++FGS CY  +P  KR
Sbjct: 717  LPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIKAWSGVKPSVKHLKVFGSFCYLHVPSVKR 776

Query: 371  QKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEK----G 538
             KLDE + K +FVGY++ SKGYR+Y+L    I+ SRDV FDEN+ WNW+  ++ K     
Sbjct: 777  GKLDERAEKGVFVGYAAESKGYRIYSLSRMKIVISRDVHFDENSYWNWDLKKVHKCDQTT 836

Query: 539  ASFFDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARC 718
             S  +   + +  E   D+E   +T                       K+R LSDVY RC
Sbjct: 837  PSILEPAIESTIIEGPLDVEATSDTPVL--------------------KMRPLSDVYERC 876

Query: 719  NFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNE 898
            N    EP  + EA +   W EAM+ EID IE+N TW+L E P  K  +GVKW+++ K N 
Sbjct: 877  NLVHAEPTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGVKWVFRTKFNS 936

Query: 899  DGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAF 1078
            DGS  R+KARLV KG+ Q  G+D+ +TFAPV+R DTIR+L+A A Q GW +Y LDVKSAF
Sbjct: 937  DGSIFRHKARLVVKGFAQVAGVDYGDTFAPVARHDTIRLLLALAGQMGWKVYHLDVKSAF 996

Query: 1079 LNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSK 1258
            LNG L EEIYV+QP+GF + G E KVY+L KALYGL+QA RAWYS+IDS+     F+RS+
Sbjct: 997  LNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYGLKQAPRAWYSRIDSHLIQLGFRRSE 1056

Query: 1259 SESTLYVKTQGKS-SLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGM 1435
            +E+TLY+K       L+V+LYVDD+L  G++  ++ +FK EM   +EMSD+G++++FLGM
Sbjct: 1057 NEATLYLKQNDDGLQLVVSLYVDDMLVTGSNVKLLADFKMEMQDVFEMSDLGIMNYFLGM 1116

Query: 1436 EIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLI 1615
            EIYQ S G+FI Q++YA +ILK+F +  C   + PL  NEK+ K+DGEK  + + YRSL+
Sbjct: 1117 EIYQCSWGIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPSAYRSLV 1176

Query: 1616 GNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRL 1795
            G+LLYLT TRPD+MF +SLLSRF++SPS  H G +KRVL+Y+KGTTN GI Y +   V+L
Sbjct: 1177 GSLLYLTVTRPDLMFPTSLLSRFLSSPSNVHMGVSKRVLKYVKGTTNLGIWYLKTVGVKL 1236

Query: 1796 EGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVI 1975
            +GY DSDWAGS+DDMKSTS Y F++GS V  W S+KQ+ VAQS+ EAEY+S A A +Q I
Sbjct: 1237 DGYADSDWAGSVDDMKSTSSYVFTIGSGVICWNSRKQEVVAQSTTEAEYISLAAAANQAI 1296

Query: 1976 WIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQL 2155
            W+RK+L D+G +Q + TEL+CDNKSAI++++NPV H RT+HI++K+H IREA ++  V+L
Sbjct: 1297 WLRKLLADLGQEQTSPTELYCDNKSAISITQNPVQHGRTKHINVKFHSIREAEKNSLVKL 1356

Query: 2156 TFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGEKC 2278
             +C +++Q+ADI TK LPK++   +R  L +V + + G+ C
Sbjct: 1357 HYCSTDEQLADIMTKGLPKSRLEFLR--LKLVMEDVDGKNC 1395


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  805 bits (2079), Expect = 0.0
 Identities = 392/760 (51%), Positives = 525/760 (69%), Gaps = 10/760 (1%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            IK LRSD G E+ S EF K+CE+ GI RQLTV  +PQQNGV+ERKN+T++EMA+SML +K
Sbjct: 588  IKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSK 647

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LPK FWAEAV  AVYL NR PT++V  KTP EAWSGRKP + HLR+FGS+ +  +P EK
Sbjct: 648  KLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEK 707

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLD+ S K IF+GY + SKGY+LYN  +R  + SR+V+FDE   W+W T+  +   +F
Sbjct: 708  RSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDWSTNCEDH--TF 765

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYAR---- 715
            F   ++    + Q+     QET                      P+ RSL ++Y      
Sbjct: 766  FPCVEEDDVEQQQQP----QETPTTPPTSPNTTLQDYESSSERMPRFRSLQEIYEATENL 821

Query: 716  ------CNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWI 877
                  C F   EP NF EAI +++WR AM EEI+ I+KN TWELV  P     +GVKW+
Sbjct: 822  DNVTLFCLFADCEPMNFQEAIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWV 881

Query: 878  YKVKVNEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQ 1057
            YK K +  G  QR KARLVAKGY+Q+ GID+ E FAPV+RL+T+R++I+ AAQ  W ++Q
Sbjct: 882  YKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQ 941

Query: 1058 LDVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTF 1237
            +DVKSAFLNG L EE+Y+EQPQG+ +KGEEDKV RLKKALYGL+QA RAW  +ID YF  
Sbjct: 942  MDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKE 1001

Query: 1238 HDFKRSKSESTLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLI 1417
             +F +   E  LY+K QGK  LIV LYVDDL+F GN+ +M  EFK +M K +EM+DMGL+
Sbjct: 1002 ANFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLM 1061

Query: 1418 HHFLGMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDAT 1597
             ++LG+E+ Q ++G+FI Q+ YA+++LK+F + D NP   P+    KL KD+  ++VD T
Sbjct: 1062 AYYLGIEVKQGNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPT 1121

Query: 1598 LYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWR 1777
            LY+SL+G+L YLT TRPDI++A  ++SR+M +P+  H   AKR+LRYIKGTT+FG+ Y  
Sbjct: 1122 LYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSN 1181

Query: 1778 GAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAAL 1957
                +L GY DSDW+G +DD KSTSG+ F +G + F+W SKKQ  V  S+ EAEYV+A  
Sbjct: 1182 SNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATS 1241

Query: 1958 ATSQVIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIE 2137
                 IW+R +L+++ + Q   T+++ DNKSAIA++KNPVFH R++HI  +YH+IRE I 
Sbjct: 1242 CVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECIS 1301

Query: 2138 SGEVQLTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQ 2257
            + +VQ+ + K+ DQVADIFTK L K  F+K+R LLGV  Q
Sbjct: 1302 NKDVQMEYVKTHDQVADIFTKPLKKEVFMKLRSLLGVQNQ 1341


>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  805 bits (2078), Expect = 0.0
 Identities = 392/760 (51%), Positives = 525/760 (69%), Gaps = 10/760 (1%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            IK LRSD G E+ S EF K+CE+ GI RQLTV  +PQQNGV+ERKN+T++EMA+SML +K
Sbjct: 588  IKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSK 647

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LPK FWAEAV  AVYL NR PT++V  KTP EAWSGRKP + HLR+FGS+ +  +P EK
Sbjct: 648  KLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEK 707

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLD+ S K IF+GY + SKGY+LYN  +R  + SR+V+FDE   W+W T+  +   +F
Sbjct: 708  RSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDWSTNCEDH--TF 765

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYAR---- 715
            F   ++    + Q+     QET                      P+ RSL ++Y      
Sbjct: 766  FPCVEEDDVEQQQQP----QETPTTPPTSPNTTLQDYESSSERMPRFRSLQEIYEATENL 821

Query: 716  ------CNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWI 877
                  C F   EP NF EAI +++WR AM EEI+ I+KN TWELV  P     +GVKW+
Sbjct: 822  DNVTLFCLFADCEPMNFQEAIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWV 881

Query: 878  YKVKVNEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQ 1057
            YK K +  G  QR KARLVAKGY+Q+ GID+ E FAPV+RL+T+R++I+ AAQ  W ++Q
Sbjct: 882  YKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQ 941

Query: 1058 LDVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTF 1237
            +DVKSAFLNG L EE+Y+EQPQG+ +KGEEDKV RLKKALYGL+QA RAW  +ID YF  
Sbjct: 942  MDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKE 1001

Query: 1238 HDFKRSKSESTLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLI 1417
             +F +   E  LY+K QGK  LIV LYVDDL+F GN+ +M  EFK +M K +EM+DMGL+
Sbjct: 1002 VNFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLM 1061

Query: 1418 HHFLGMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDAT 1597
             ++LG+E+ Q ++G+FI Q+ YA+++LK+F + D NP   P+    KL KD+  ++VD T
Sbjct: 1062 AYYLGIEVKQGNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPT 1121

Query: 1598 LYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWR 1777
            LY+SL+G+L YLT TRPDI++A  ++SR+M +P+  H   AKR+LRYIKGTT+FG+ Y  
Sbjct: 1122 LYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSN 1181

Query: 1778 GAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAAL 1957
                +L GY DSDW+G +DD KSTSG+ F +G + F+W SKKQ  V  S+ EAEYV+A  
Sbjct: 1182 SNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATS 1241

Query: 1958 ATSQVIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIE 2137
                 IW+R +L+++ + Q   T+++ DNKSAIA++KNPVFH R++HI  +YH+IRE I 
Sbjct: 1242 CVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECIS 1301

Query: 2138 SGEVQLTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQ 2257
            + +VQ+ + K+ DQVADIFTK L K  F+K+R LLGV  Q
Sbjct: 1302 NKDVQMEYVKTHDQVADIFTKPLKKEVFMKLRSLLGVQNQ 1341


>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  824 bits (2129), Expect = 0.0
 Identities = 408/760 (53%), Positives = 541/760 (71%), Gaps = 5/760 (0%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            +KVLR+DNG EY S EF+ FC+E GI  QLT  Y+PQ NGVSERKN+TVMEMA+ ML  K
Sbjct: 1301 VKVLRTDNGGEYTSKEFSVFCQEAGIVHQLTAPYSPQXNGVSERKNRTVMEMARCMLFEK 1360

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LPK  WAEAV T+VYLLNR PTK+V  KTP+EAWSG KPSVKHL++FGS CY  +P  K
Sbjct: 1361 KLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVK 1420

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEK---- 535
            R KLDE + K +FVGY++ SKGYR+Y+L    I+ SRDV FDEN+ W W+  ++ K    
Sbjct: 1421 RGKLDERAEKGVFVGYAAESKGYRIYSLSRMKIVISRDVHFDENSYWXWDLKKVHKCDQT 1480

Query: 536  GASFFDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYAR 715
              S  +   + +  E   D+E   +T                       K+R L DVY R
Sbjct: 1481 TPSILEPAIESTIIEGPLDVEATSDTPVL--------------------KMRPLFDVYER 1520

Query: 716  CNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVN 895
            CN    EP  + EA +   W EAM+ EID IE+N TW+L E P  K  +GVKW+++ K N
Sbjct: 1521 CNLVHAEPTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGVKWVFRTKFN 1580

Query: 896  EDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSA 1075
             DGS  R+KARLV KG+ Q  G+D+ +TFAPV+R DTIR+L+A A Q GW +Y LDVKSA
Sbjct: 1581 SDGSIFRHKARLVVKGFAQVAGVDYGDTFAPVARHDTIRLLLALAGQMGWKVYHLDVKSA 1640

Query: 1076 FLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRS 1255
            FLNG L EEIYV+QP+GF + G E KVY+L KALYGL+QA RAWYS+IDS+     F+RS
Sbjct: 1641 FLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYGLKQAPRAWYSRIDSHLIQLGFRRS 1700

Query: 1256 KSESTLYVKTQGKS-SLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLG 1432
            ++E+TLY+K       L+V+LYVDD+L  G++  ++ +FK EM   +EM D+G++++FLG
Sbjct: 1701 ENEATLYLKQNDDGLQLVVSLYVDDMLVTGSNVKLLADFKMEMQDVFEMFDLGIMNYFLG 1760

Query: 1433 MEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSL 1612
            MEIYQ S G+FI Q++YA +ILK+F +  C   + PL  NEK+ K+DGEK  + + YRSL
Sbjct: 1761 MEIYQCSWGIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLEEPSAYRSL 1820

Query: 1613 IGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVR 1792
            +G+LLYLT T+PD+MF +SLLSRFM+SPS  H G AKRVL+Y+KGTTN GI Y +   V+
Sbjct: 1821 VGSLLYLTVTKPDLMFPASLLSRFMSSPSNVHMGVAKRVLKYLKGTTNLGIWYLKTGGVK 1880

Query: 1793 LEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQV 1972
            L+GY DSDWAGS+DDMKSTSGY F++GS V  W S+KQ+ VAQS+ EAEY+S A A +Q 
Sbjct: 1881 LDGYADSDWAGSVDDMKSTSGYAFTIGSGVICWNSRKQEVVAQSTTEAEYISLAAAANQA 1940

Query: 1973 IWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQ 2152
            IW+RK+L D+G +Q + TEL+CDNKSAI++++NPV H RT+HI++K+H IREA ++  V+
Sbjct: 1941 IWLRKLLADLGQEQSSPTELYCDNKSAISIAQNPVHHGRTKHINVKFHSIREAEKNSLVK 2000

Query: 2153 LTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQHIKGE 2272
            L +C +++Q+ADI TK LPK++   +R  LG+ + ++K E
Sbjct: 2001 LHYCSTDEQLADIMTKGLPKSRLEFLRLKLGMSKANLKEE 2040


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  803 bits (2075), Expect = 0.0
 Identities = 391/760 (51%), Positives = 524/760 (68%), Gaps = 10/760 (1%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            IK LRSD G E+ S EF K+CE+ GI RQLTV  +PQQNGV+ERKN+T++EMA+SML +K
Sbjct: 577  IKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSK 636

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LPK FWAEAV  AVYL NR PT++V  KTP EAWSGRKP + HLR+FGS+ +  +P EK
Sbjct: 637  KLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEK 696

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLD+ S K IF+GY + SKGY+LYN  +R  + SR+V+FDE   W+W T+  +   +F
Sbjct: 697  RSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDWSTNCEDH--TF 754

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYAR---- 715
            F   ++    + Q+     QET                      P+ RSL ++Y      
Sbjct: 755  FPCVEEDDVEQQQQP----QETPTTPPTSPNTTLQDYESSSERMPRFRSLQEIYEATENL 810

Query: 716  ------CNFCMIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWI 877
                  C F   EP NF EAI +++WR AM EEI+ I+KN TWELV  P     +GVKW+
Sbjct: 811  DNVTLFCLFADCEPMNFQEAIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWV 870

Query: 878  YKVKVNEDGSFQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQ 1057
            YK K +  G  QR KARLVAKGY+Q+ GID+ E FAPV+RL+T+R++I+ AAQ  W ++Q
Sbjct: 871  YKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQ 930

Query: 1058 LDVKSAFLNGELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTF 1237
            +DVKSAFLNG L EE+Y+EQPQG+ +KGEEDKV RLKKALYGL+QA RAW  +ID YF  
Sbjct: 931  MDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAPRAWNVRIDKYFKE 990

Query: 1238 HDFKRSKSESTLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLI 1417
             +F +   E  LY+K QGK  LIV LYVDDL+F GN+ +M  EFK +M K +EM+DMGL+
Sbjct: 991  ANFIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLM 1050

Query: 1418 HHFLGMEIYQESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDAT 1597
             ++LG+E+ Q ++G+FI Q+ YA+++LK+F + D NP   P+    KL KD+  ++VD T
Sbjct: 1051 AYYLGIEVKQGNEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDEEGEKVDPT 1110

Query: 1598 LYRSLIGNLLYLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWR 1777
            LY+SL+G+L YLT TRPDI++A  ++SR+M +P+  H   AKR+LRYIKGTT+FG+ Y  
Sbjct: 1111 LYKSLVGSLRYLTCTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSN 1170

Query: 1778 GAQVRLEGYCDSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAAL 1957
                +L GY DSDW+G +DD KSTSG+ F +G + F+W SKKQ  V  S+ EAEYV+A  
Sbjct: 1171 SNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATS 1230

Query: 1958 ATSQVIWIRKILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIE 2137
                 IW+R +L+++ + Q   T+++ DNKS IA++KNPVFH R++HI  +YH+IRE I 
Sbjct: 1231 CVCHAIWLRNLLKELSLPQVEPTKIYVDNKSTIALAKNPVFHDRSKHIHTRYHYIRECIS 1290

Query: 2138 SGEVQLTFCKSEDQVADIFTKALPKNKFLKMRELLGVVQQ 2257
            + +VQ+ + K+ DQVADIFTK L K  F+K+R LLGV  Q
Sbjct: 1291 NKDVQMEYVKTHDQVADIFTKPLKKEVFMKLRSLLGVQNQ 1330


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  799 bits (2064), Expect = 0.0
 Identities = 386/754 (51%), Positives = 521/754 (69%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            IK +RSD G E+ S EF K+CE+ GI RQLTV  +PQQNGV+ERKN+T++EMA+SML +K
Sbjct: 590  IKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSK 649

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
             LPK  WAEAV  AVYLLNR PTK+V  KTP EAWSGRKP V HLR+FGS+ +A +P EK
Sbjct: 650  RLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEK 709

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
            R KLD+ S K IF+GY + SKGY+LYN  T+  + SR+++FDE   W+W ++E  +  +F
Sbjct: 710  RSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNE--EDYNF 767

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARCNFC 727
            F   ++      +E+    + T                     PP   + S +  +C   
Sbjct: 768  FPHFEEDKPEPTREEPPSEEPTT--------------------PPTSPTSSQIEEKC--- 804

Query: 728  MIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDGS 907
              EP +F EAI+++ WR AM EEI  I+KN TWEL   P   + +GVKW+YK K N  G 
Sbjct: 805  --EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGE 862

Query: 908  FQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLNG 1087
             +R KARLVAKGY+Q+ GID+ E FAPV+RL+T+R++I+ AAQ  W ++Q+DVKSAFLNG
Sbjct: 863  VERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNG 922

Query: 1088 ELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSES 1267
            +L EE+Y+EQPQG+++KGEEDKV RLKKALYGL+QA RAW ++ID YF   DF +   E 
Sbjct: 923  DLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEH 982

Query: 1268 TLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEIYQ 1447
             LY+K Q +  LI  LYVDDL+F GN+ +M  EFK EM K +EM+D+GL+ ++LG+E+ Q
Sbjct: 983  ALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQ 1042

Query: 1448 ESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGNLL 1627
            E +G+FI Q+ YA+ +LK+F M D NP   P+    KL K +  + VD T ++SL+G+L 
Sbjct: 1043 EDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLR 1102

Query: 1628 YLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRLEGYC 1807
            YLT TRPDI++A  ++SR+M  P+  HF AAKR+LRYIKGT NFG+ Y   +  +L GY 
Sbjct: 1103 YLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYS 1162

Query: 1808 DSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWIRK 1987
            DSDW G +DD KSTSG+ F +G + F+W SKKQ  V  S+ EAEYV+A       IW+R 
Sbjct: 1163 DSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRN 1222

Query: 1988 ILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQLTFCK 2167
            +L+++ + Q   T++F DNKSAIA++KNPVFH R++HI  +YH+IRE +   +VQL + K
Sbjct: 1223 LLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVK 1282

Query: 2168 SEDQVADIFTKALPKNKFLKMRELLGVVQQHIKG 2269
            + DQVADIFTK L +  F+KMR LLGV +  ++G
Sbjct: 1283 THDQVADIFTKPLKREDFIKMRSLLGVAKSSLRG 1316


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  792 bits (2045), Expect = 0.0
 Identities = 403/750 (53%), Positives = 525/750 (70%)
 Frame = +2

Query: 8    IKVLRSDNGKEYNSNEFNKFCEEEGIGRQLTVVYTPQQNGVSERKNQTVMEMAKSMLHAK 187
            IKVLRSD G EY S EF K+CE  GI RQLT  Y+ QQNGV+ERKN+T+ +MA SML  K
Sbjct: 421  IKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSMLQDK 480

Query: 188  GLPKTFWAEAVYTAVYLLNRCPTKAVMDKTPLEAWSGRKPSVKHLRIFGSVCYAQIPKEK 367
            G+PK+FWAEAV TAVY+LNR PTKAV ++TP EAW G+KP + H+R+FG           
Sbjct: 481  GMPKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFG----------- 529

Query: 368  RQKLDETSAKCIFVGYSSLSKGYRLYNLKTRSIMSSRDVIFDENASWNWETSEIEKGASF 547
                      CI        K  +  N   R I     V + +       T E+E     
Sbjct: 530  ----------CICYAQVPAQKRVKFDNKSDRCIF----VGYADGQPHMQGTHEVEYHPPS 575

Query: 548  FDEKKQHSAFEHQEDMEMNQETDFXXXXXXXXXXXXXXXXXXXPPKLRSLSDVYARCNFC 727
                   S+     D   + E                             S+ +  CN+ 
Sbjct: 576  PQSSSPRSSSSASSDSSPSSEEQISYTGISSKTESTSQQRG---------SEQHEFCNYS 626

Query: 728  MIEPENFDEAIKEEAWREAMQEEIDVIEKNKTWELVERPINKEVVGVKWIYKVKVNEDGS 907
            ++EP++F EA K + W +AM++EI +IEKN TWELV+RP ++EV+GVKW+YK K+N DGS
Sbjct: 627  VVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGS 686

Query: 908  FQRNKARLVAKGYTQQPGIDFQETFAPVSRLDTIRMLIAFAAQQGWFLYQLDVKSAFLNG 1087
             Q+ KARLVAKG+ Q+PGID+ ET+A V+RL+TI  +IA AAQ+ W +YQLDVKSAFLNG
Sbjct: 687  VQKYKARLVAKGFKQKPGIDYYETYAHVARLETIHTIIALAAQKRWKIYQLDVKSAFLNG 746

Query: 1088 ELNEEIYVEQPQGFVIKGEEDKVYRLKKALYGLRQASRAWYSQIDSYFTFHDFKRSKSES 1267
             L+EEIYVEQP+ F ++G E+KV+RLKKALYGL+QA RAWYSQID YF    F +S SE 
Sbjct: 747  YLDEEIYVEQPERFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEP 806

Query: 1268 TLYVKTQGKSSLIVALYVDDLLFCGNDENMINEFKNEMMKRYEMSDMGLIHHFLGMEIYQ 1447
             LYVK  G   LIV+LYVDDL++ GN E ++ +FK +MM  YEMSD+GL+H+FLGME++Q
Sbjct: 807  ILYVKKTGTDILIVSLYVDDLIYTGNSEKLMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQ 866

Query: 1448 ESDGVFICQKRYAENILKRFGMSDCNPTSVPLVVNEKLKKDDGEKRVDATLYRSLIGNLL 1627
              +G+FI Q++YAENILK+F M +C   + PL+ NEK K  DG  + D T+YRSL+G+LL
Sbjct: 867  SDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLL 926

Query: 1628 YLTSTRPDIMFASSLLSRFMNSPSQAHFGAAKRVLRYIKGTTNFGIKYWRGAQVRLEGYC 1807
            YLT+TRPDIMFA+SLLSR+M+SPSQ +F AAKRVLRYIKGT  +GI Y    + +L GY 
Sbjct: 927  YLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTAYYGIWYKPVKESKLIGYT 986

Query: 1808 DSDWAGSLDDMKSTSGYTFSLGSSVFSWASKKQDSVAQSSAEAEYVSAALATSQVIWIRK 1987
            DSDWAG LDDMKSTSGY FSLGS ++SW++KKQ+ VA SSAEAEYV+A+ A SQV+W+R+
Sbjct: 987  DSDWAGCLDDMKSTSGYAFSLGSGMWSWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRR 1046

Query: 1988 ILEDIGMKQGAATELFCDNKSAIAMSKNPVFHSRTRHISIKYHFIREAIESGEVQLTFCK 2167
            I+ED+G KQ   T ++CD+KSAIA+++NPV H RT+HI+IKYH+IREA++  EV+L FC+
Sbjct: 1047 IMEDLGEKQYQPTTIYCDSKSAIAINENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCR 1106

Query: 2168 SEDQVADIFTKALPKNKFLKMRELLGVVQQ 2257
            +++Q+ADIFTKAL K KF+  REL+GV ++
Sbjct: 1107 TDEQLADIFTKALSKEKFICDRELIGVCKK 1136