BLASTX nr result
ID: Rehmannia28_contig00017175
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00017175
(637 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011090767.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 358 e-121
ref|XP_011090766.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 358 e-120
ref|XP_012832471.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 335 e-111
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 319 e-105
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 319 e-105
ref|XP_010093994.1| DEAD-box ATP-dependent RNA helicase 58 [Moru... 318 e-105
ref|XP_010255927.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 317 e-104
ref|XP_007034658.1| P-loop containing nucleoside triphosphate hy... 312 e-104
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 315 e-103
ref|XP_007034657.1| P-loop containing nucleoside triphosphate hy... 312 e-103
ref|XP_011021586.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 312 e-102
ref|XP_007034656.1| P-loop containing nucleoside triphosphate hy... 312 e-102
gb|KVI01543.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal ... 311 e-102
ref|XP_015888056.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 311 e-102
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i... 310 e-101
ref|XP_009338466.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 309 e-101
ref|XP_010322552.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 305 e-101
ref|XP_009603254.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 308 e-100
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ... 303 e-100
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 306 e-100
>ref|XP_011090767.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X2 [Sesamum indicum]
Length = 454
Score = 358 bits (920), Expect = e-121
Identities = 181/212 (85%), Positives = 189/212 (89%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PTHVQ EALPVLFSGRDCVI AQTGSGKTLAYLLLI+SVVNA+RSSVQAL+VVPTRELGM
Sbjct: 96 PTHVQREALPVLFSGRDCVIHAQTGSGKTLAYLLLIYSVVNAQRSSVQALIVVPTRELGM 155
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK EL+SEQ+SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML
Sbjct: 156 QVTKVARMLAAKYPELDSEQRSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 215
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DKQIL LD MRVLVIDEVDFMFN INNRQT+FASASIPQHRRF+
Sbjct: 216 DKQILKLDTMRVLVIDEVDFMFNSSREVSSLRKLLTTYSSINNRQTVFASASIPQHRRFL 275
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDCIQQKWT+ADVVHVHVNPVEPMPSCLYHRF
Sbjct: 276 YDCIQQKWTKADVVHVHVNPVEPMPSCLYHRF 307
>ref|XP_011090766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Sesamum indicum]
Length = 472
Score = 358 bits (920), Expect = e-120
Identities = 181/212 (85%), Positives = 189/212 (89%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PTHVQ EALPVLFSGRDCVI AQTGSGKTLAYLLLI+SVVNA+RSSVQAL+VVPTRELGM
Sbjct: 96 PTHVQREALPVLFSGRDCVIHAQTGSGKTLAYLLLIYSVVNAQRSSVQALIVVPTRELGM 155
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK EL+SEQ+SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML
Sbjct: 156 QVTKVARMLAAKYPELDSEQRSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 215
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DKQIL LD MRVLVIDEVDFMFN INNRQT+FASASIPQHRRF+
Sbjct: 216 DKQILKLDTMRVLVIDEVDFMFNSSREVSSLRKLLTTYSSINNRQTVFASASIPQHRRFL 275
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDCIQQKWT+ADVVHVHVNPVEPMPSCLYHRF
Sbjct: 276 YDCIQQKWTKADVVHVHVNPVEPMPSCLYHRF 307
>ref|XP_012832471.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
[Erythranthe guttata] gi|604342488|gb|EYU41518.1|
hypothetical protein MIMGU_mgv1a005973mg [Erythranthe
guttata]
Length = 463
Score = 335 bits (858), Expect = e-111
Identities = 174/212 (82%), Positives = 184/212 (86%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT+VQ+EALPVLFSGRDCVI AQTGSGKTLAYLLLIFSVV A+RS+VQAL+VVPTRELGM
Sbjct: 89 PTNVQNEALPVLFSGRDCVIHAQTGSGKTLAYLLLIFSVVQAQRSAVQALIVVPTRELGM 148
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR+LAAKS +L EQ+S TVMALLDGGTLRRHKSWLKVEPPAIVIATLRSL QML
Sbjct: 149 QVTKVARLLAAKSPDL--EQKSYTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLSQML 206
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DK IL LD MRVLVIDEVDFMFN INNRQTIFASASIPQHRRF+
Sbjct: 207 DKHILKLDTMRVLVIDEVDFMFNSSEEVSSLKKLLTIHSSINNRQTIFASASIPQHRRFV 266
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDCIQQKWT+ADVVHVHVNPV PMPSCLYHRF
Sbjct: 267 YDCIQQKWTKADVVHVHVNPVNPMPSCLYHRF 298
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Vitis vinifera]
Length = 482
Score = 319 bits (817), Expect = e-105
Identities = 157/212 (74%), Positives = 177/212 (83%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALPVL SGRDC++ AQTGSGKTL YLLLIFSVVN K S+VQAL+VVPTRELG+
Sbjct: 102 PTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGI 161
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK +E E EQ+SCTVMALLDGG L+RHKSWLK EPP IV+AT+RSLCQML
Sbjct: 162 QVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQML 221
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQI L+ MRVLVIDEVDFMFN NNRQT+FASASIPQHRRF+
Sbjct: 222 EKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFL 281
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
+DCIQQKWT++DVVHVHVNP+EPMPS L+HRF
Sbjct: 282 HDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRF 313
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 319 bits (817), Expect = e-105
Identities = 157/212 (74%), Positives = 177/212 (83%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALPVL SGRDC++ AQTGSGKTL YLLLIFSVVN K S+VQAL+VVPTRELG+
Sbjct: 106 PTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGI 165
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK +E E EQ+SCTVMALLDGG L+RHKSWLK EPP IV+AT+RSLCQML
Sbjct: 166 QVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQML 225
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQI L+ MRVLVIDEVDFMFN NNRQT+FASASIPQHRRF+
Sbjct: 226 EKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFL 285
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
+DCIQQKWT++DVVHVHVNP+EPMPS L+HRF
Sbjct: 286 HDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRF 317
>ref|XP_010093994.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
gi|587865467|gb|EXB55009.1| DEAD-box ATP-dependent RNA
helicase 58 [Morus notabilis]
Length = 464
Score = 318 bits (815), Expect = e-105
Identities = 153/212 (72%), Positives = 179/212 (84%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP+LFSGRDCV+ AQTGSGKTL YLLLIFSVVN +RS+VQAL+VVPTRELGM
Sbjct: 88 PTDVQRQALPILFSGRDCVLHAQTGSGKTLTYLLLIFSVVNTQRSAVQALIVVPTRELGM 147
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR LAAK +E + EQ+SC+VMALLDGGTLRRHKSWLK EPP +V+AT+ SLCQ L
Sbjct: 148 QVTKVARTLAAKPMESDLEQKSCSVMALLDGGTLRRHKSWLKAEPPTVVVATIGSLCQQL 207
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DKQIL L+ MRVLVIDEVDF+FN I+NRQT+FASASIPQHRRF+
Sbjct: 208 DKQILTLESMRVLVIDEVDFIFNSSKQVSSLRKLLTSYSTISNRQTVFASASIPQHRRFL 267
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
++C+QQKWT+++VVHVHVNP+EPMPSCL+H F
Sbjct: 268 HECVQQKWTKSNVVHVHVNPIEPMPSCLHHNF 299
>ref|XP_010255927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
[Nelumbo nucifera]
Length = 458
Score = 317 bits (812), Expect = e-104
Identities = 153/212 (72%), Positives = 178/212 (83%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT+VQ ++LP+L SG+DCV+ AQTGSGKTLAYLLLIFSV+N KRS+VQAL+VVPTRELGM
Sbjct: 79 PTNVQRQSLPILLSGQDCVLHAQTGSGKTLAYLLLIFSVINVKRSTVQALIVVPTRELGM 138
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK +E EQ++CTVMALLDGG LRRHK+WLK EPP IV+AT+ SLCQM+
Sbjct: 139 QVTKVARMLAAKPVETGPEQKNCTVMALLDGGMLRRHKNWLKAEPPTIVVATMASLCQMI 198
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K+I L+ MRVLVIDEVD MFN INNRQT+FASASIPQH+RF+
Sbjct: 199 EKKIFTLETMRVLVIDEVDCMFNSSRHVRSLKKLLTSYSSINNRQTVFASASIPQHKRFL 258
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDCIQQKWT++ VVHVHVNPVEPMPSCL+HRF
Sbjct: 259 YDCIQQKWTKSSVVHVHVNPVEPMPSCLHHRF 290
>ref|XP_007034658.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 3 [Theobroma cacao]
gi|508713687|gb|EOY05584.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 3
[Theobroma cacao]
Length = 351
Score = 312 bits (800), Expect = e-104
Identities = 154/212 (72%), Positives = 174/212 (82%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ EALPVLFSG DC++ AQTGSGKTL YLLLI+SV+N KRS+VQAL+VVPTRELGM
Sbjct: 97 PTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYSVINPKRSAVQALIVVPTRELGM 156
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK ++ E EQ+S TVMALLDGG LRRHKSWLK EPP IV+AT+ SL QML
Sbjct: 157 QVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHKSWLKAEPPNIVVATIGSLSQML 216
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQI LD MR+LV+DEVDF+FN NNRQT+FASASIPQHRRF+
Sbjct: 217 EKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSYSSCNNRQTVFASASIPQHRRFL 276
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
+DCIQQKWT+ DVVHVHVNPV+PMPSCL HRF
Sbjct: 277 HDCIQQKWTKGDVVHVHVNPVKPMPSCLLHRF 308
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 315 bits (808), Expect = e-103
Identities = 153/212 (72%), Positives = 176/212 (83%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALPVLFSGRDC++ AQTGSGKTLAYLLLIFSV+N +RS+VQAL+VVPTRELG+
Sbjct: 101 PTDVQKQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQALIVVPTRELGI 160
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAA E ++EQ+SCTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQML
Sbjct: 161 QVTKVARMLAATPTENDAEQKSCTVMALLDGGMLRRHKSWLKAEPPTIVVATIASLCQML 220
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K +L L+ M+VLVIDEVDFMFN N+RQT+FASASIPQH RF+
Sbjct: 221 EKHLLKLESMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFL 280
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDCIQQKWT+ DVVHVHVNP+EPMP+CL HRF
Sbjct: 281 YDCIQQKWTKRDVVHVHVNPIEPMPTCLQHRF 312
>ref|XP_007034657.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 2 [Theobroma cacao]
gi|508713686|gb|EOY05583.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 2
[Theobroma cacao]
Length = 409
Score = 312 bits (800), Expect = e-103
Identities = 154/212 (72%), Positives = 174/212 (82%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ EALPVLFSG DC++ AQTGSGKTL YLLLI+SV+N KRS+VQAL+VVPTRELGM
Sbjct: 97 PTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYSVINPKRSAVQALIVVPTRELGM 156
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK ++ E EQ+S TVMALLDGG LRRHKSWLK EPP IV+AT+ SL QML
Sbjct: 157 QVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHKSWLKAEPPNIVVATIGSLSQML 216
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQI LD MR+LV+DEVDF+FN NNRQT+FASASIPQHRRF+
Sbjct: 217 EKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSYSSCNNRQTVFASASIPQHRRFL 276
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
+DCIQQKWT+ DVVHVHVNPV+PMPSCL HRF
Sbjct: 277 HDCIQQKWTKGDVVHVHVNPVKPMPSCLLHRF 308
>ref|XP_011021586.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Populus euphratica]
Length = 477
Score = 312 bits (800), Expect = e-102
Identities = 151/212 (71%), Positives = 176/212 (83%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALPVLFSGRDC++ AQTGSGKTLAYLLLIFSV+N +RS+VQ+L+VVPTRELG+
Sbjct: 101 PTDVQKQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQSLIVVPTRELGI 160
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAA E ++EQ+SCTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQML
Sbjct: 161 QVTKVARMLAATPTENDAEQKSCTVMALLDGGMLRRHKSWLKAEPPTIVVATIASLCQML 220
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K +L L+ M+VLVIDEVDFMF+ N+RQT+FASASIPQH RF+
Sbjct: 221 EKHLLKLESMQVLVIDEVDFMFSSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFL 280
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDCIQQKWT+ DVVHVHVNP+EPMP+CL HRF
Sbjct: 281 YDCIQQKWTKRDVVHVHVNPIEPMPTCLQHRF 312
>ref|XP_007034656.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
gi|508713685|gb|EOY05582.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 1
[Theobroma cacao]
Length = 477
Score = 312 bits (800), Expect = e-102
Identities = 154/212 (72%), Positives = 174/212 (82%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ EALPVLFSG DC++ AQTGSGKTL YLLLI+SV+N KRS+VQAL+VVPTRELGM
Sbjct: 97 PTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYSVINPKRSAVQALIVVPTRELGM 156
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK ++ E EQ+S TVMALLDGG LRRHKSWLK EPP IV+AT+ SL QML
Sbjct: 157 QVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHKSWLKAEPPNIVVATIGSLSQML 216
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQI LD MR+LV+DEVDF+FN NNRQT+FASASIPQHRRF+
Sbjct: 217 EKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSYSSCNNRQTVFASASIPQHRRFL 276
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
+DCIQQKWT+ DVVHVHVNPV+PMPSCL HRF
Sbjct: 277 HDCIQQKWTKGDVVHVHVNPVKPMPSCLLHRF 308
>gb|KVI01543.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal [Cynara
cardunculus var. scolymus]
Length = 463
Score = 311 bits (797), Expect = e-102
Identities = 152/212 (71%), Positives = 175/212 (82%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT +Q +ALPVLFSGRDC++ AQTGSGKTLAYLLLIFSV+N +RS+VQAL+VVPTRELGM
Sbjct: 102 PTEIQRQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQALIVVPTRELGM 161
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QV KVARMLAAKS + E +SCT+MALLDGGTLRR KSWLK EPP I++ATL SLCQML
Sbjct: 162 QVAKVARMLAAKSDQPVLEDKSCTIMALLDGGTLRRQKSWLKSEPPTIIVATLGSLCQML 221
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQ + L+ MRVLVIDEVDFMFN INNRQ+IFASASIPQHRRF+
Sbjct: 222 EKQTIKLESMRVLVIDEVDFMFNSSHQVSSLRKLLISYSSINNRQSIFASASIPQHRRFL 281
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDCIQQKWT+ADVVH+H NPV+PMP ++HRF
Sbjct: 282 YDCIQQKWTKADVVHIHANPVQPMPPRIHHRF 313
>ref|XP_015888056.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Ziziphus jujuba]
Length = 464
Score = 311 bits (797), Expect = e-102
Identities = 151/212 (71%), Positives = 174/212 (82%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP LFSGRDCV+ AQTGSGKTL YLLLI+SVV +RS+VQAL+VVPTRELGM
Sbjct: 88 PTDVQRQALPTLFSGRDCVLHAQTGSGKTLTYLLLIYSVVKTQRSAVQALIVVPTRELGM 147
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAA+ +E E +Q+ CTVMALLDGG LRRHKSWLK EPP +V+AT+ SLCQML
Sbjct: 148 QVTKVARMLAARPMESELDQKLCTVMALLDGGMLRRHKSWLKAEPPTVVVATIGSLCQML 207
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQI LD MRVLVIDEVDFMFN I+NRQT+FASASIPQHR F+
Sbjct: 208 EKQIFTLDSMRVLVIDEVDFMFNSSKQVSSLRKLLTSYSTISNRQTVFASASIPQHRHFL 267
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
+DCIQQKWT++DVVHVHVN +EPMP+C+ HRF
Sbjct: 268 HDCIQQKWTKSDVVHVHVNAIEPMPTCIVHRF 299
>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gi|11385590|gb|AAG34876.1|AF261021_1 putative
chloroplast RNA helicase VDL isoform 1 [Nicotiana
tabacum]
Length = 466
Score = 310 bits (793), Expect = e-101
Identities = 154/212 (72%), Positives = 173/212 (81%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP L+SGRDCV+ AQTGSGKTLAYLL I SV++++RS+VQAL+VVPTRELGM
Sbjct: 90 PTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGM 149
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK ELES +SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 150 QVTKVARMLAAKPSELESGPKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQML 209
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 210 EKHILKLDSCQVLVVDEVDFMFNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFL 269
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDC+QQKWT+ADVVHVHVN VEPMPSCL+HRF
Sbjct: 270 YDCVQQKWTKADVVHVHVNSVEPMPSCLHHRF 301
>ref|XP_009338466.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like isoform X1 [Pyrus x bretschneideri]
Length = 471
Score = 309 bits (792), Expect = e-101
Identities = 154/212 (72%), Positives = 174/212 (82%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP LFSGRDC++ AQTGSGKTL YLLLIFS VN +RS+VQALVVVPTRELGM
Sbjct: 96 PTPVQRQALPTLFSGRDCILHAQTGSGKTLTYLLLIFSAVNTRRSAVQALVVVPTRELGM 155
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK E E EQ+SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 156 QVTKVARMLAAKPKEGEVEQKSCTVMALLDGGMLTRHKSWLKAEPPTIVVATIGSLCQML 215
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQ++ L+ MRVLVIDEVDFMF+ IN RQT+FASASIPQHRRF+
Sbjct: 216 EKQMIKLESMRVLVIDEVDFMFS-SKQVASLRKLLTSYTSINTRQTVFASASIPQHRRFL 274
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
+DCIQQKWT++D +HVHVNPV+PMPSCL HRF
Sbjct: 275 HDCIQQKWTKSDAIHVHVNPVQPMPSCLQHRF 306
>ref|XP_010322552.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X3 [Solanum lycopersicum]
gi|723658749|ref|XP_010322555.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 58, chloroplastic isoform X3
[Solanum lycopersicum]
Length = 380
Score = 305 bits (782), Expect = e-101
Identities = 153/212 (72%), Positives = 172/212 (81%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP LFSGRDCV+ AQTGSGKTLAYLL + SVV+++RS+VQAL+VVPTRELGM
Sbjct: 2 PTKVQLQALPFLFSGRDCVLHAQTGSGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGM 61
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAA E ES +SCTVMALLDGG L+RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 62 QVTKVARMLAANPSEHESGLKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQML 121
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 122 EKHILKLDTCQVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFL 181
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDC+QQKWT+ADVVHVHVN VEPMPSCL+HRF
Sbjct: 182 YDCMQQKWTRADVVHVHVNSVEPMPSCLHHRF 213
>ref|XP_009603254.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Nicotiana tomentosiformis]
Length = 489
Score = 308 bits (790), Expect = e-100
Identities = 154/212 (72%), Positives = 173/212 (81%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP L+SGRDCV+ AQTGSGKTLAYLL I SV++++RS+VQAL+VVPTRELGM
Sbjct: 113 PTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGM 172
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK ELES +SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLC+ML
Sbjct: 173 QVTKVARMLAAKPSELESGPKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCRML 232
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 233 EKHILKLDSCQVLVVDEVDFMFNSSKEISSLKSLLTSYSSSKNRQTIFASASIPQHRRFL 292
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDCIQQKWT+ADVVHVHVN VEPMPSCL+HRF
Sbjct: 293 YDCIQQKWTKADVVHVHVNSVEPMPSCLHHRF 324
>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
tabacum]
Length = 365
Score = 303 bits (775), Expect = e-100
Identities = 151/212 (71%), Positives = 171/212 (80%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ ALP L+SGRDCV+ AQTGSGKTLAYLL + SV++++RS+VQAL+VVPTRELGM
Sbjct: 90 PTEVQLLALPFLYSGRDCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGM 149
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR LAAK EL+S +SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 150 QVTKVARTLAAKPSELKSGPKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQML 209
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 210 EKHILKLDSCQVLVVDEVDFMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFL 269
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDC+QQKWT+ADVVHVHVN VEPMPSCL+HRF
Sbjct: 270 YDCVQQKWTKADVVHVHVNSVEPMPSCLHHRF 301
>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Solanum tuberosum]
Length = 462
Score = 306 bits (783), Expect = e-100
Identities = 153/212 (72%), Positives = 172/212 (81%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP LFSGRDCV+ AQTGSGKTLAYLL + SVV+++RS+VQAL+VVPTRELGM
Sbjct: 83 PTEVQLQALPFLFSGRDCVLHAQTGSGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGM 142
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAA E ES +SCTVMALLDGG L+RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 143 QVTKVARMLAANPSEHESGLKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQML 202
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 203 EKHILKLDTCQVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFL 262
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRF 636
YDC+QQKWT+ADVVHVHVN VEPMPSCL+HRF
Sbjct: 263 YDCMQQKWTRADVVHVHVNSVEPMPSCLHHRF 294