BLASTX nr result
ID: Rehmannia28_contig00017153
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia28_contig00017153
(347 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011075463.1| PREDICTED: probable mediator of RNA polymera... 127 1e-32
ref|XP_011079079.1| PREDICTED: probable mediator of RNA polymera... 90 8e-19
ref|XP_015088875.1| PREDICTED: probable mediator of RNA polymera... 74 4e-13
ref|XP_009613484.1| PREDICTED: probable mediator of RNA polymera... 71 3e-12
ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymera... 69 1e-11
ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymera... 69 2e-11
ref|XP_009790095.1| PREDICTED: probable mediator of RNA polymera... 68 3e-11
ref|XP_010317834.1| PREDICTED: probable mediator of RNA polymera... 64 4e-10
emb|CDP19596.1| unnamed protein product [Coffea canephora] 61 9e-09
ref|XP_002517284.1| PREDICTED: probable mediator of RNA polymera... 60 2e-08
ref|XP_010653635.1| PREDICTED: probable mediator of RNA polymera... 60 2e-08
gb|EYU20814.1| hypothetical protein MIMGU_mgv1a007273mg [Erythra... 59 8e-08
ref|XP_012857448.1| PREDICTED: probable mediator of RNA polymera... 59 8e-08
ref|XP_010653636.1| PREDICTED: probable mediator of RNA polymera... 59 8e-08
emb|CBI32806.3| unnamed protein product [Vitis vinifera] 57 3e-07
gb|EYU18603.1| hypothetical protein MIMGU_mgv1a006753mg [Erythra... 57 4e-07
ref|XP_012828170.1| PREDICTED: probable mediator of RNA polymera... 57 4e-07
ref|XP_015158374.1| PREDICTED: probable mediator of RNA polymera... 53 1e-06
gb|KDO53643.1| hypothetical protein CISIN_1g012904mg [Citrus sin... 54 3e-06
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera... 54 3e-06
>ref|XP_011075463.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Sesamum indicum]
Length = 471
Score = 127 bits (320), Expect = 1e-32
Identities = 67/114 (58%), Positives = 78/114 (68%)
Frame = -2
Query: 346 ENGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIE 167
E+GRK EK++ E PDDS L + +AE RN E +LRKQAPPSKPNRPP E
Sbjct: 291 ESGRKLNLEKINNRNWKVESPDDSRPLLPKEKRAEQMRNVEPILRKQAPPSKPNRPPGGE 350
Query: 166 SGPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKLN 5
SGP +P+PPS ESG RP P V+ K NEI +QKSD GTIQKKP+P QQEK N
Sbjct: 351 SGPGRPRPPSSESGPGRPRPAVRPKPNNEIKVQQKSDTGTIQKKPMP-QQEKSN 403
>ref|XP_011079079.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Sesamum indicum]
Length = 441
Score = 89.7 bits (221), Expect = 8e-19
Identities = 52/114 (45%), Positives = 64/114 (56%)
Frame = -2
Query: 343 NGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIES 164
N R R + ++ FE P DS+ D K+E K NQES+L+KQAPP KPNR
Sbjct: 277 NPRDNRALNKNQEKQKFESPSDSSTH-PKDQKSEQKTNQESILKKQAPPCKPNR------ 329
Query: 163 GPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKLNC 2
P+DES TRRP P +Q K+ NE M +Q KGT KKP P QQE +C
Sbjct: 330 ------LPTDESATRRPKPALQPKSNNETMIQQ---KGTKPKKPSPHQQENFDC 374
>ref|XP_015088875.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum pennellii]
Length = 455
Score = 73.6 bits (179), Expect = 4e-13
Identities = 45/112 (40%), Positives = 65/112 (58%)
Frame = -2
Query: 343 NGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIES 164
NGRK ++P + + D SNA ++K E ++ QE++++KQ +KP +P ES
Sbjct: 282 NGRKPSLGNQNIPFQKKQSADCSNAS-PKENKGEQQKKQEAVIKKQTTVAKPTKPSGGES 340
Query: 163 GPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
GP +P P+ E +LK NE+ +QKSDKGTIQK+PV QQ KL
Sbjct: 341 GPGRPTKPALEQ---------KLKV-NEMNFQQKSDKGTIQKRPVESQQNKL 382
>ref|XP_009613484.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nicotiana tomentosiformis]
Length = 461
Score = 71.2 bits (173), Expect = 3e-12
Identities = 42/112 (37%), Positives = 62/112 (55%)
Frame = -2
Query: 343 NGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIES 164
NGRK + + P R + D +A +SK E ++ QE++++KQ P +PN+P +S
Sbjct: 287 NGRKLSLDNQNNPVRKKQSADFFDAA-PKESKGEQQKKQEAVIKKQTPVMRPNKPSGGDS 345
Query: 163 GPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
GP +P P E Q +E+ +QKSDKGT+QK+PVP Q KL
Sbjct: 346 GPGRPIKPVSE----------QKLKMSEMNFQQKSDKGTVQKRPVPSQLNKL 387
>ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum lycopersicum]
Length = 455
Score = 69.3 bits (168), Expect = 1e-11
Identities = 43/112 (38%), Positives = 63/112 (56%)
Frame = -2
Query: 343 NGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIES 164
NGRK ++P + + D NA ++K E ++ QE++++KQ +KP +P E
Sbjct: 282 NGRKPSLGNQNIPLQKKQSADCFNAS-PKENKGEQQKKQEAVIKKQTTVAKPTKPSGGEF 340
Query: 163 GPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
GP +P P+ E +LK NE+ +QKSDKGTIQK+PV QQ KL
Sbjct: 341 GPGRPTKPALEQ---------KLKV-NEMNFQQKSDKGTIQKRPVASQQNKL 382
>ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum tuberosum]
Length = 455
Score = 68.9 bits (167), Expect = 2e-11
Identities = 44/112 (39%), Positives = 63/112 (56%)
Frame = -2
Query: 343 NGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIES 164
NGRK ++P + + D NA ++K E ++ QE++++KQ KP +P ES
Sbjct: 282 NGRKPSLGNQNIPFQKKQSADCFNAS-PKENKGEQQKKQEAVIKKQTTVVKPTKPSGGES 340
Query: 163 GPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
GP +P P+ E +LK NE+ +QKSDKGTIQK+PV QQ KL
Sbjct: 341 GPGRPIKPALEQ---------KLKV-NEMNFQQKSDKGTIQKRPVAPQQNKL 382
>ref|XP_009790095.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nicotiana sylvestris]
Length = 457
Score = 68.2 bits (165), Expect = 3e-11
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = -2
Query: 343 NGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIES 164
NGRK + + P R + D +A + K+E ++ QE++++KQ P +PN+P +S
Sbjct: 283 NGRKSSLDDQNNPVRKKQSADFFDAA-PKERKSEQQKKQETVIKKQTPVMRPNKPCGGDS 341
Query: 163 GPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
GP +P P E Q +E+ +QKSD+GT+ K+PVP QQ KL
Sbjct: 342 GPGRPIKPVSE----------QKLKMSEMNFQQKSDQGTVHKRPVPTQQNKL 383
>ref|XP_010317834.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum lycopersicum]
Length = 260
Score = 64.3 bits (155), Expect = 4e-10
Identities = 42/112 (37%), Positives = 62/112 (55%)
Frame = -2
Query: 343 NGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIES 164
NGRK ++P + + D NA ++K E ++ QE++++KQ +K +P ES
Sbjct: 90 NGRKPSLGNQNIPLQKKQSADCFNAS-PKENKGEQQKKQEAVIKKQTIVAKLTKPSGGES 148
Query: 163 GPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
GP +P P+ E +LK NE+ +QKS KGTIQK+PV QQ KL
Sbjct: 149 GPGRPTKPALEQ---------KLKV-NEMNFQQKSHKGTIQKRPVASQQNKL 190
>emb|CDP19596.1| unnamed protein product [Coffea canephora]
Length = 474
Score = 61.2 bits (147), Expect = 9e-09
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Frame = -2
Query: 346 ENGRKRRPEKMDVPRRN-------FEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKP 188
+NGRK E VPR+ P D +A K+ QE++++KQA +KP
Sbjct: 303 DNGRKPSLENHTVPRQKQQIRGNLISPPKDRKGEQMKKQEAVTKK-QEAVMKKQAAVAKP 361
Query: 187 NRPPKIESGPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
N+P ESGP +P PS + +P +QKSDKGT QK+ +P Q KL
Sbjct: 362 NKPSFGESGPGRPAKPSVDQYHMKP--------------QQKSDKGTSQKRELPSQPNKL 407
>ref|XP_002517284.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Ricinus communis]
gi|223543547|gb|EEF45077.1| conserved hypothetical
protein [Ricinus communis]
Length = 473
Score = 60.5 bits (145), Expect = 2e-08
Identities = 39/115 (33%), Positives = 57/115 (49%)
Frame = -2
Query: 346 ENGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIE 167
ENGRK E+ ++P+R P ++N + D+K+ R QE+M KPN+P
Sbjct: 308 ENGRKSSLEQKNIPKRKEHTPSEANV-VAKDNKSHQSRRQEAM-------RKPNKPSTTV 359
Query: 166 SGPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKLNC 2
SGP +P S V+ KA NE ++K+DK Q+K QQ+K C
Sbjct: 360 SGPGRPTKQS-----------VEQKANNESKIQRKTDKLVTQRKLPGGQQDKFKC 403
>ref|XP_010653635.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X1 [Vitis vinifera]
Length = 477
Score = 60.5 bits (145), Expect = 2e-08
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Frame = -2
Query: 346 ENGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIE 167
ENGRK E ++ +R + PD++N +++ ++KQ P K N+P +
Sbjct: 296 ENGRKPALENQNISKRKQQLPDEANGVT---------KDKGQQIKKQEPVVKSNKPINTQ 346
Query: 166 SGPLKP--------KPPSDESGTRRP-NPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQE 14
SG +P +P + +SG RP P V K NE QKSDK I +KPV QQ+
Sbjct: 347 SGFGRPQEILVRPNRPSNTDSGPGRPPKPGVGQKVNNETKFLQKSDKPAIHRKPVVGQQD 406
Query: 13 K 11
K
Sbjct: 407 K 407
>gb|EYU20814.1| hypothetical protein MIMGU_mgv1a007273mg [Erythranthe guttata]
Length = 413
Score = 58.5 bits (140), Expect = 8e-08
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Frame = -2
Query: 295 FEGPDDSNAPLNNDSKAENKRN------QESMLRKQAPPSKPNRPPKIESGPLKPKPPSD 134
F+G DD+ P N+ +N+ N +ES+L KQ P KP+ P ESGP +PK
Sbjct: 264 FDGIDDNGNPQNSGEFDKNRENGRERSIEESVLNKQVRPVKPSGPHNGESGPGRPK---- 319
Query: 133 ESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVP-RQQEKLN 5
V L++K +QKSD +QKKPVP QQ KLN
Sbjct: 320 ----------VALQSK----VQQKSDGDAVQKKPVPNHQQAKLN 349
>ref|XP_012857448.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Erythranthe guttata]
Length = 429
Score = 58.5 bits (140), Expect = 8e-08
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Frame = -2
Query: 295 FEGPDDSNAPLNNDSKAENKRN------QESMLRKQAPPSKPNRPPKIESGPLKPKPPSD 134
F+G DD+ P N+ +N+ N +ES+L KQ P KP+ P ESGP +PK
Sbjct: 280 FDGIDDNGNPQNSGEFDKNRENGRERSIEESVLNKQVRPVKPSGPHNGESGPGRPK---- 335
Query: 133 ESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVP-RQQEKLN 5
V L++K +QKSD +QKKPVP QQ KLN
Sbjct: 336 ----------VALQSK----VQQKSDGDAVQKKPVPNHQQAKLN 365
>ref|XP_010653636.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Vitis vinifera]
Length = 476
Score = 58.5 bits (140), Expect = 8e-08
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Frame = -2
Query: 346 ENGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIE 167
ENGRK E ++ +R + PD++N +++ ++KQ P K N+P +
Sbjct: 296 ENGRKPALENQNISKRKQQLPDEANGVT---------KDKGQQIKKQEPVVKSNKPINTQ 346
Query: 166 SGPLKP--------KPPSDESGTRRP-NPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQE 14
SG +P +P + +SG RP P V K NE QKSDK I +KPV QQ+
Sbjct: 347 SGFGRPQEILVRPNRPSNTDSGPGRPPKPGVGQKVNNETKFLQKSDKPAIHRKPVVGQQD 406
>emb|CBI32806.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 57.0 bits (136), Expect = 3e-07
Identities = 40/107 (37%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Frame = -2
Query: 295 FEGPDDSNAPLNNDSKAENKRN--------QESMLRKQAPPS----KPNRPPKIESGPLK 152
F+G DD P NN N+ N Q RKQ P +PNRP +SGP +
Sbjct: 172 FDGMDDDGNPRNNGEFNRNRENGRKPALENQNISKRKQQLPDEANVRPNRPSNTDSGPGR 231
Query: 151 PKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEK 11
P P P V K NE QKSDK I +KPV QQ+K
Sbjct: 232 P-----------PKPGVGQKVNNETKFLQKSDKPAIHRKPVVGQQDK 267
>gb|EYU18603.1| hypothetical protein MIMGU_mgv1a006753mg [Erythranthe guttata]
Length = 433
Score = 56.6 bits (135), Expect = 4e-07
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = -2
Query: 244 ENKRNQESMLRKQA--PPSKPNRPPKIESGPLKPKPPSDESGTRRPNPVVQLKAKNEIMA 71
E K+ E+ML++Q PPS+ NRPP PS ESG RP P +
Sbjct: 303 EEKKAPEAMLKRQQCPPPSRTNRPP-----------PSSESGPGRPKPAA--------IK 343
Query: 70 EQKSDKGTIQKKPVPRQQEKLN 5
Q ++ G IQ+KP+P QQEKLN
Sbjct: 344 PQANNNGAIQRKPMPTQQEKLN 365
>ref|XP_012828170.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Erythranthe guttata]
Length = 455
Score = 56.6 bits (135), Expect = 4e-07
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = -2
Query: 244 ENKRNQESMLRKQA--PPSKPNRPPKIESGPLKPKPPSDESGTRRPNPVVQLKAKNEIMA 71
E K+ E+ML++Q PPS+ NRPP PS ESG RP P +
Sbjct: 325 EEKKAPEAMLKRQQCPPPSRTNRPP-----------PSSESGPGRPKPAA--------IK 365
Query: 70 EQKSDKGTIQKKPVPRQQEKLN 5
Q ++ G IQ+KP+P QQEKLN
Sbjct: 366 PQANNNGAIQRKPMPTQQEKLN 387
>ref|XP_015158374.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum tuberosum]
Length = 142
Score = 53.1 bits (126), Expect = 1e-06
Identities = 33/94 (35%), Positives = 48/94 (51%)
Frame = -2
Query: 283 DDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIESGPLKPKPPSDESGTRRPNPV 104
DD N ++ K E ++ Q S+L KPN+PP SG +P P+ E
Sbjct: 3 DDGNVIISVGQKDEQEKKQTSVL------VKPNKPPGGNSGRGRPTKPTLEQ-------- 48
Query: 103 VQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKLNC 2
+L +E+ ++KSD+ IQ +PVP QQ KL C
Sbjct: 49 -KLNNDHEMKLQEKSDQRKIQTRPVPTQQNKLKC 81
>gb|KDO53643.1| hypothetical protein CISIN_1g012904mg [Citrus sinensis]
Length = 448
Score = 54.3 bits (129), Expect = 3e-06
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = -2
Query: 346 ENGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKP-NRPPKI 170
E+GRK E ++ +R + P++ N +++ + KR QE+++R P+KP N+P
Sbjct: 282 ESGRKPSVENQNIAKRKQQTPNEPNVLAKDNNSLQMKR-QEAVVR----PNKPSNKPSST 336
Query: 169 ESGPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
SGP +P + + K NE +QKSDK I KKP+ Q KL
Sbjct: 337 NSGPGRPLKQN-----------MGQKVDNESKLQQKSDKAAINKKPLNSQHNKL 379
>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Citrus sinensis]
Length = 448
Score = 54.3 bits (129), Expect = 3e-06
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = -2
Query: 346 ENGRKRRPEKMDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKP-NRPPKI 170
E+GRK E ++ +R + P++ N +++ + KR QE+++R P+KP N+P
Sbjct: 282 ESGRKPSVENQNIAKRKQQTPNEPNVLAKDNNSLQMKR-QEAVVR----PNKPSNKPSST 336
Query: 169 ESGPLKPKPPSDESGTRRPNPVVQLKAKNEIMAEQKSDKGTIQKKPVPRQQEKL 8
SGP +P + + K NE +QKSDK I KKP+ Q KL
Sbjct: 337 NSGPGRPLKQN-----------MGQKVDNESKLQQKSDKAAINKKPLNSQHNKL 379