BLASTX nr result

ID: Rehmannia28_contig00016053 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia28_contig00016053
         (400 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011071899.1| PREDICTED: eukaryotic translation initiation...    70   1e-11
ref|XP_011101309.1| PREDICTED: eukaryotic translation initiation...    67   2e-10
ref|XP_012829270.1| PREDICTED: eukaryotic translation initiation...    63   4e-09
ref|XP_006358488.1| PREDICTED: eukaryotic translation initiation...    54   9e-06

>ref|XP_011071899.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Sesamum indicum] gi|747051623|ref|XP_011071900.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit C-like [Sesamum indicum]
          Length = 926

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 40/85 (47%), Positives = 47/85 (55%)
 Frame = +1

Query: 7    GGGRWQEXXXXXXXXXXXXXXXXXXXXXXXXAQFTRDRTGRSGGYHGSRHQDGPGRMHQT 186
            GG RWQE                         + ++DRT R GG+HGSRHQ+G GR +Q+
Sbjct: 846  GGNRWQEFSFSQGRQGGGGGRTGYNAGG---GRASKDRTARYGGHHGSRHQEGHGRTYQS 902

Query: 187  GSTVRGGQVDGYTRPMVNLNRGVRA 261
             S  R GQVD  TR MVNLNRGVRA
Sbjct: 903  ASAGRSGQVDASTR-MVNLNRGVRA 926


>ref|XP_011101309.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Sesamum indicum]
          Length = 930

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 42/90 (46%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
 Frame = +1

Query: 7    GGGRWQEXXXXXXXXXXXXXXXXXXXXXXXXAQ-----FTRDRTGRSGGYHGSRHQDGPG 171
            GGGRWQE                        A      F+RDR  RSGGY GSR+QDGPG
Sbjct: 846  GGGRWQEFSFSQGRQGSSGGRMGYNVGGRSSASGLVGGFSRDRQARSGGYQGSRNQDGPG 905

Query: 172  RMHQTGSTVRGGQVDGYTRPMVNLNRGVRA 261
            R+    S  RG Q+D  TR MVNLNRG+RA
Sbjct: 906  RI----SGTRGTQMDASTR-MVNLNRGIRA 930


>ref|XP_012829270.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C
            [Erythranthe guttata] gi|604297483|gb|EYU17696.1|
            hypothetical protein MIMGU_mgv1a000985mg [Erythranthe
            guttata]
          Length = 922

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 30/51 (58%), Positives = 37/51 (72%)
 Frame = +1

Query: 106  FTRDRTGRSGGYHGSRHQDGPGRMHQTGSTVRGGQVDGYTRPMVNLNRGVR 258
            + RD     GGY   RHQDG GR++Q+GS+ RGGQ+D  TR MV+LNRGVR
Sbjct: 872  YNRDNRQGRGGYQNQRHQDGAGRVYQSGSSARGGQMDSSTR-MVSLNRGVR 921


>ref|XP_006358488.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Solanum tuberosum]
          Length = 922

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 34/87 (39%), Positives = 43/87 (49%)
 Frame = +1

Query: 1    ATGGGRWQEXXXXXXXXXXXXXXXXXXXXXXXXAQFTRDRTGRSGGYHGSRHQDGPGRMH 180
            A GGGRWQ+                         Q +RDRT ++ G  G     G G  +
Sbjct: 842  AAGGGRWQDFSFSQGRQGGSGGRTGYVGGRSTSGQTSRDRTNQARGTLG-----GQGSRY 896

Query: 181  QTGSTVRGGQVDGYTRPMVNLNRGVRA 261
            Q+G+T RGGQ+DG  R MVNLNRG R+
Sbjct: 897  QSGTTSRGGQMDGSGR-MVNLNRGGRS 922


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